41 results on '"Nguyen, Thuong T. T."'
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2. A New Species and Three New Records Belonging to Mucorales and Mortierellales from Korea.
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Nguyen, Thuong T. T., Kang, Ki Hyun, Kim, Su Jin, Kim, Min Kyung, Noh, So Jeong, and Lee, Hyang Burm
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SOIL sampling , *PHYLOGENY , *MUCOR , *SPECIES , *MORPHOLOGY - Abstract
During an investigation of fungi of the orders Mucorales and Mortierellales in Korea, a new Backusella species, Backusella terrestris sp. nov., and three new records, Entomortierella sugadairana, Mucor nederlandicus, and Poitrasia circinans, were found in soil and freshwater samples. All species are described based on morphological and molecular evidence. Backusella terrestris is characterized by globose or subglobose sporangiospores, a variable (globose, subglobose, oval, or oblong) columellae, chlamydospore production, and a maximum growth temperature of 34 °C. The distinct characteristics of the new species and their closely related species are discussed. An identification key to the Backusella species of Korea is also presented. [ABSTRACT FROM AUTHOR]
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- 2024
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3. Descriptions of 19 Unrecorded Species Belonging to Sordariomycetes in Korea.
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Nguyen, Thuong T. T. and Lee, Hyang Burm
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FRESHWATER habitats , *MOLECULAR phylogeny , *SOIL structure , *TRICHODERMA , *FRESH water - Abstract
A survey of fungal diversity in soil and freshwater habitats in Korea isolated several species of the class Sordariomycetes. Morphological characteristics and multigene phylogenetic analyses showed that these species represented new records for Korea. Herein, we report the descriptions, illustrations, and molecular phylogeny of 19 species previously undescribed in Korea, including Achaetomiella virescens, Arxotrichum gangligerum, Caespitomonium euphorbiae, Comoclathris typhicola, Gamsia aggregata, Luteonectria nematophila, Paramyrothecium sinense, Parasarocladium debruynii, Pleurocordyceps agarica, Pyrenochaetopsis sinensis, Scedosporium boydii, Scedosporium dehoogii, Scedosporium minutisporum, Striatibotrys rhabdosporus, Trichocladium crispatum, Trichoderma azevedoi, Trichoderma longifialidicum, Xepicula leucotricha, and Xylomelasma sordida. [ABSTRACT FROM AUTHOR]
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- 2024
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4. Fungal diversity notes 1387–1511: taxonomic and phylogenetic contributions on genera and species of fungal taxa
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Boonmee, Saranyaphat, Wanasinghe, Dhanushka N., Calabon, Mark S., Huanraluek, Naruemon, Chandrasiri, Sajini K. U., Jones, Gareth E. B., Rossi, Walter, Leonardi, Marco, Singh, Sanjay K., Rana, Shiwali, Singh, Paras N., Maurya, Deepak K., Lagashetti, Ajay C., Choudhary, Deepika, Dai, Yu-Cheng, Zhao, Chang-Lin, Mu, Yan-Hong, Yuan, Hai-Sheng, He, Shuang-Hui, Phookamsak, Rungtiwa, Jiang, Hong-Bo, Martín, María P., Dueñas, Margarita, Telleria, M. Teresa, Kałucka, Izabela L., Jagodziński, Andrzej M., Liimatainen, Kare, Pereira, Diana S., Phillips, Alan J. L., Suwannarach, Nakarin, Kumla, Jaturong, Khuna, Surapong, Lumyong, Saisamorn, Potter, Tarynn B., Shivas, Roger G., Sparks, Adam H., Vaghefi, Niloofar, Abdel-Wahab, Mohamed A., Abdel-Aziz, Faten A., Li, Guo-Jie, Lin, Wen-Fei, Singh, Upendra, Bhatt, Rajendra P., Lee, Hyang Burm, Nguyen, Thuong T. T., Kirk, Paul M., Dutta, Arun Kumar, Acharya, Krishnendu, Sarma, V. Venkateswara, Niranjan, M., Rajeshkumar, Kunhiraman C., Ashtekar, Nikhil, Lad, Sneha, Wijayawardene, Nalin N., Bhat, Darbe J., Xu, Rong-Ju, Wijesinghe, Subodini N., Shen, Hong-Wei, Luo, Zong-Long, Zhang, Jing-Yi, Sysouphanthong, Phongeun, Thongklang, Naritsada, Bao, Dan-Feng, Aluthmuhandiram, Janith V. S., Abdollahzadeh, Jafar, Javadi, Alireza, Dovana, Francesco, Usman, Muhammad, Khalid, Abdul Nasir, Dissanayake, Asha J., Telagathoti, Anusha, Probst, Maraike, Peintner, Ursula, Garrido-Benavent, Isaac, Bóna, Lilla, Merényi, Zsolt, Boros, Lajos, Zoltán, Bratek, Stielow, J. Benjamin, Jiang, Ning, Tian, Cheng-Ming, Shams, Esmaeil, Dehghanizadeh, Farzaneh, Pordel, Adel, Javan-Nikkhah, Mohammad, Denchev, Teodor T., Denchev, Cvetomir M., Kemler, Martin, Begerow, Dominik, Deng, Chun-Ying, Harrower, Emma, Bozorov, Tohir, Kholmuradova, Tutigul, Gafforov, Yusufjon, Abdurazakov, Aziz, Xu, Jian-Chu, Mortimer, Peter E., Ren, Guang-Cong, Jeewon, Rajesh, Maharachchikumbura, Sajeewa S. N., Phukhamsakda, Chayanard, Mapook, Ausana, and Hyde, Kevin D.
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- 2021
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5. Early-diverging fungal phyla: taxonomy, species concept, ecology, distribution, anthropogenic impact, and novel phylogenetic proposals
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Voigt, Kerstin, James, Timothy Y., Kirk, Paul M., Santiago, André L. C. M. de A., Waldman, Bruce, Griffith, Gareth W., Fu, Minjie, Radek, Renate, Strassert, Jürgen F. H., Wurzbacher, Christian, Jerônimo, Gustavo Henrique, Simmons, David R., Seto, Kensuke, Gentekaki, Eleni, Hurdeal, Vedprakash G., Hyde, Kevin D., Nguyen, Thuong T. T., and Lee, Hyang Burm
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- 2021
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6. Do Intracerebral Cytokine Responses Explain the Harmful Effects of Dexamethasone in Human Immunodeficiency Virus–associated Cryptococcal Meningitis?
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Beardsley, Justin, Hoang, Nhat L. T., Kibengo, Freddie M., Tung, Nguyen L. N., Binh, Tran Q., Le Q. Hung, Chierakul, Wirongrong, Thwaites, Guy E., Chau, Nguyen V. V., Nguyen, Thuong T. T., Geskus, Ronald B., and Day, Jeremy N.
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- 2019
7. Fungal diversity notes 1036–1150: taxonomic and phylogenetic contributions on genera and species of fungal taxa
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Hyde, Kevin D., Tennakoon, Danushka S., Jeewon, Rajesh, Bhat, D. Jayarama, Maharachchikumbura, Sajeewa S. N., Rossi, Walter, Leonardi, Marco, Lee, Hyang Burm, Mun, Hye Yeon, Houbraken, Jos, Nguyen, Thuong T. T., Jeon, Sun Jeong, Frisvad, Jens Christian, Wanasinghe, Dhanushka N., Lücking, Robert, Aptroot, André, Cáceres, Marcela E. S., Karunarathna, Samantha C., Hongsanan, Sinang, Phookamsak, Rungtiwa, de Silva, Nimali I., Thambugala, Kasun M., Jayawardena, Ruvishika S., Senanayake, Indunil C., Boonmee, Saranyaphat, Chen, Jie, Luo, Zong-Long, Phukhamsakda, Chayanard, Pereira, Olinto L., Abreu, Vanessa P., Rosado, André Wilson Campos, Bart, Buyck, Randrianjohany, Emile, Hofstetter, Valérie, Gibertoni, Tatiana B., Soares, Adriene Mayra da Silva, Plautz, Jr., Helio Longoni, Sotão, Helen Maria Pontes, Xavier, William Kalhy Silva, Bezerra, Jadson Diogo Pereira, de Oliveira, Thays Gabrielle Lins, de Souza-Motta, Cristina Maria, Magalhães, Oliane Maria Correia, Bundhun, Digvijayini, Harishchandra, Dulanjalee, Manawasinghe, Ishara S., Dong, Wei, Zhang, Sheng-Nan, Bao, Dan-Feng, Samarakoon, Milan C., Pem, Dhandevi, Karunarathna, Anuruddha, Lin, Chuan-Gen, Yang, Jing, Perera, Rekhani H., Kumar, Vinit, Huang, Shi-Ke, Dayarathne, Monika C., Ekanayaka, Anusha H., Jayasiri, Subashini C., Xiao, Yuanpin, Konta, Sirinapa, Niskanen, Tuula, Liimatainen, Kare, Dai, Yu-Cheng, Ji, Xiao-Hong, Tian, Xue-Mei, Mešić, Armin, Singh, Sanjay K., Phutthacharoen, Kunthida, Cai, Lei, Sorvongxay, Touny, Thiyagaraja, Vinodhini, Norphanphoun, Chada, Chaiwan, Napalai, Lu, Yong-Zhong, Jiang, Hong-Bo, Zhang, Jin-Feng, Abeywickrama, Pranami D., Aluthmuhandiram, Janith V. S., Brahmanage, Rashika S., Zeng, Ming, Chethana, Thilini, Wei, Deping, Réblová, Martina, Fournier, Jacques, Nekvindová, Jana, do Nascimento Barbosa, Renan, dos Santos, José Ewerton Felinto, de Oliveira, Neiva Tinti, Li, Guo-Jie, Ertz, Damien, Shang, Qiu-Ju, Phillips, Alan J. L., Kuo, Chang-Hsin, Camporesi, Erio, Bulgakov, Timur S., Lumyong, Saisamorn, Jones, E. B. Gareth, Chomnunti, Putarak, Gentekaki, Eleni, Bungartz, Frank, Zeng, Xiang-Yu, Fryar, Sally, Tkalčec, Zdenko, Liang, Junmin, Li, Guangshuo, Wen, Ting-Chi, Singh, Paras Nath, Gafforov, Yusufjon, Promputtha, Itthayakorn, Yasanthika, Erandi, Goonasekara, Ishani D., Zhao, Rui-Lin, Zhao, Qi, Kirk, Paul M., Liu, Jian-Kui, Yan, JiYe, Mortimer, Peter E., Xu, Jianchu, and Doilom, Mingkwan
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- 2019
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8. Fungal diversity notes 929–1035: taxonomic and phylogenetic contributions on genera and species of fungi
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Phookamsak, Rungtiwa, Hyde, Kevin D., Jeewon, Rajesh, Bhat, D. Jayarama, Jones, E. B. Gareth, Maharachchikumbura, Sajeewa S. N., Raspé, Olivier, Karunarathna, Samantha C., Wanasinghe, Dhanushka N., Hongsanan, Sinang, Doilom, Mingkwan, Tennakoon, Danushka S., Machado, Alexandre R., Firmino, André L., Ghosh, Aniket, Karunarathna, Anuruddha, Mešić, Armin, Dutta, Arun Kumar, Thongbai, Benjarong, Devadatha, Bandarupalli, Norphanphoun, Chada, Senwanna, Chanokned, Wei, Deping, Pem, Dhandevi, Ackah, Frank Kwekucher, Wang, Gen-Nuo, Jiang, Hong-Bo, Madrid, Hugo, Lee, Hyang Burm, Goonasekara, Ishani D., Manawasinghe, Ishara S., Kušan, Ivana, Cano, Josep, Gené, Josepa, Li, Junfu, Das, Kanad, Acharya, Krishnendu, Raj, K. N. Anil, Latha, K. P. Deepna, Chethana, K. W. Thilini, He, Mao-Qiang, Dueñas, Margarita, Jadan, Margita, Martín, María P., Samarakoon, Milan C., Dayarathne, Monika C., Raza, Mubashar, Park, Myung Soo, Telleria, M. Teresa, Chaiwan, Napalai, Matočec, Neven, de Silva, Nimali I., Pereira, Olinto L., Singh, Paras Nath, Manimohan, Patinjareveettil, Uniyal, Priyanka, Shang, Qiu-Ju, Bhatt, Rajendra P., Perera, Rekhani H., Alvarenga, Renato Lúcio Mendes, Nogal-Prata, Sandra, Singh, Sanjay K., Vadthanarat, Santhiti, Oh, Seung-Yoon, Huang, Shi-Ke, Rana, Shiwali, Konta, Sirinapa, Paloi, Soumitra, Jayasiri, Subashini C., Jeon, Sun Jeong, Mehmood, Tahir, Gibertoni, Tatiana Baptista, Nguyen, Thuong T. T., Singh, Upendra, Thiyagaraja, Vinodhini, Sarma, V. Venkateswara, Dong, Wei, Yu, Xian-Dong, Lu, Yong-Zhong, Lim, Young Woon, Chen, Yun, Tkalčec, Zdenko, Zhang, Zhi-Feng, Luo, Zong-Long, Daranagama, Dinushani A., Thambugala, Kasun M., Tibpromma, Saowaluck, Camporesi, Erio, Bulgakov, Timur S., Dissanayake, Asha J., Senanayake, Indunil C., Dai, Dong Qin, Tang, Li-Zhou, Khan, Sehroon, Zhang, Huang, Promputtha, Itthayakorn, Cai, Lei, Chomnunti, Putarak, Zhao, Rui-Lin, Lumyong, Saisamorn, Boonmee, Saranyaphat, Wen, Ting-Chi, Mortimer, Peter E., and Xu, Jianchu
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- 2019
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9. Additions to the Knowledge of the Fungal Order Eurotiales in Korea: Eight Undescribed Species.
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Nguyen, Thuong T. T., Kang, Ki Hyun, Kim, Dong Hee, Kim, Su Jin, Mun, Hye Yeon, Cheon, Wonsu, and Lee, Hyang Burm
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SPECIES , *METABOLITES , *PENICILLIUM , *TALAROMYCES , *FRESH water , *ASCOMYCETES - Abstract
Eurotiales is a relatively large order of Ascomycetes, well-known for their ability to produce secondary metabolites with potential beneficial applications. To understand their diversity and distribution, different environmental sources including soil, freshwater, insect, and indoor air were investigated. Eight strains of Eurotiales were isolated and identified based on their morphological characters and a multi-gene phylogenetic analysis of the ITS, BenA, CaM, and RPB2 regions. We identified eight taxa that were previously not reported from Korea: Aspergillus baeticus, A. griseoaurantiacus, A. spinulosporus, Penicillium anthracinoglaciei, P. labradorum, P. nalgiovense, Talaromyces atroroseus, and T. georgiensis. Detailed descriptions, illustrations, and phylogenetic tree for the eight new records species are presented, and information regarding the records is also discussed. [ABSTRACT FROM AUTHOR]
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- 2023
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10. A New Species and Five New Records of Talaromyces (Eurotiales, Aspergillaceae) Belonging to Section Talaromyces in Korea.
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Nguyen, Thuong T. T. and Hyang Burm Lee
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TALAROMYCES , *SPECIES , *AGRICULTURE , *METABOLITES , *PHYLA (Genus) - Abstract
Talaromyces is a genus within the phylum Ascomycota (class Eurotiomycetes, order Eurotiales, family Trichocomaceae). Many species in this genus are known to produce diverse secondary metabolites with great potential for agricultural, medical, and pharmaceutical applications. During a survey on fungal diversity in the genus Talaromyces in Korea, six strains were isolated from soil, indoor air, and freshwater environments. Based on morphological, physiological, and multi-locus (ITS, BenA, CaM, and RPB2) phylogenetic analyses, we identified five previously unrecorded species in Korea (T. brevis, T. fusiformis, T. muroii, T. ruber, and T. soli) and a new species (T. echinulatus sp. nov.) belonging to section Talaromyces. Herein, detailed descriptions, illustrations, and phylogenetic tree are provided. [ABSTRACT FROM AUTHOR]
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- 2023
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11. Discovery of a New Lichtheimia (Lichtheimiaceae, Mucorales) from Invertebrate Niche and Its Phylogenetic Status and Physiological Characteristics.
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Nguyen, Thuong T. T., Monteiro de Azevedo Santiago, André Luiz Cabral, Kirk, Paul M., and Lee, Hyang Burm
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SPECIES diversity , *INVERTEBRATES , *MUCORMYCOSIS , *RECOMBINANT DNA , *PHYSIOLOGY - Abstract
Species of Lichtheimia are important opportunistic fungal pathogens in the order Mucorales that are isolated from various sources such as soil, indoor air, food products, feces, and decaying vegetables. In recent years, species of Lichtheimia have become an emerging causative agent of invasive mucormycosis. In Europe and USA, Lichtheimia are the second and third most common causal fungus of mucormycosis, respectively. Thus, the aim of this study was to survey the diversity of species of Lichtheimia hidden in poorly studied hosts, such as invertebrates, in Korea. Eight Lichtheimia strains were isolated from invertebrate samples. Based on morphology, physiology, and phylogenetic analyses of ITS and LSU rDNA sequence data, the strains were identified as L. hyalospora, L. ornata, L. ramosa, and a novel species, L. koreana sp. nov. Lichtheimia koreana is characterized by a variable columellae, sporangiophores arising solitarily or up to three at one place from stolons, and slow growth on MEA and PDA at all temperatures tested. The new species grows best at 30 and 35 °C and has a maximum growth temperature of 40 °C. Detailed descriptions, illustrations, and a phylogenetic tree are provided. [ABSTRACT FROM AUTHOR]
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- 2023
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12. Figure 1 from: Hurdeal VG, Gentekaki E, Hyde KD, Nguyen TTT, Lee HB (2021) Novel Mucor species (Mucoromycetes, Mucoraceae) from northern Thailand. MycoKeys 84: 57-78. https://doi.org/10.3897/mycokeys.84.71530
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Hurdeal, Vedprakash G., primary, Gentekaki, Eleni, additional, Hyde, Kevin D., additional, Nguyen, Thuong T. T., additional, and Lee, Hyang Burm, additional
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- 2021
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13. Figure 3 from: Hurdeal VG, Gentekaki E, Hyde KD, Nguyen TTT, Lee HB (2021) Novel Mucor species (Mucoromycetes, Mucoraceae) from northern Thailand. MycoKeys 84: 57-78. https://doi.org/10.3897/mycokeys.84.71530
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Hurdeal, Vedprakash G., primary, Gentekaki, Eleni, additional, Hyde, Kevin D., additional, Nguyen, Thuong T. T., additional, and Lee, Hyang Burm, additional
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- 2021
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14. Figure 4 from: Hurdeal VG, Gentekaki E, Hyde KD, Nguyen TTT, Lee HB (2021) Novel Mucor species (Mucoromycetes, Mucoraceae) from northern Thailand. MycoKeys 84: 57-78. https://doi.org/10.3897/mycokeys.84.71530
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Hurdeal, Vedprakash G., primary, Gentekaki, Eleni, additional, Hyde, Kevin D., additional, Nguyen, Thuong T. T., additional, and Lee, Hyang Burm, additional
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- 2021
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15. Figure 2 from: Hurdeal VG, Gentekaki E, Hyde KD, Nguyen TTT, Lee HB (2021) Novel Mucor species (Mucoromycetes, Mucoraceae) from northern Thailand. MycoKeys 84: 57-78. https://doi.org/10.3897/mycokeys.84.71530
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Hurdeal, Vedprakash G., primary, Gentekaki, Eleni, additional, Hyde, Kevin D., additional, Nguyen, Thuong T. T., additional, and Lee, Hyang Burm, additional
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- 2021
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16. Uncharted Diversity and Ecology of Saprolegniaceae (Oomycota) in Freshwater Environments.
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Nam, Bora, Nguyen, Thuong T. T., Lee, Hyang Burm, Park, Sang Kyu, and Choi, Young-Joon
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FRESH water , *FRESHWATER habitats , *CARBON cycle , *AQUATIC animals , *SAPROPHYTES - Abstract
The fungal-like family Saprolegniaceae (Oomycota), also called "water mold," includes mostly aquatic saprophytes as well as notorious aquatic animal pathogens. Most studies on Saprolegniaceae have been biased toward pathogenic species that are important to aquaculture rather than saprotrophic species, despite the latter's crucial roles in carbon cycling of freshwater ecosystems. Few attempts have been made to study the diversity and ecology of Saprolegniaceae; thus, their ecological role is not well-known. During a survey of oomycetes between 2016 and 2021, we investigated the diversity and distribution of culturable Saprolegniaceae species in freshwater ecosystems of Korea. In the present study, members of Saprolegniaceae were isolated and identified at species level based on their cultural, morphological, and molecular phylogenetic analyses. Furthermore, substrate preference and seasonal dynamics for each were examined. Most of the species were previously reported as animal pathogens; however, in the present study, they were often isolated from other freshwater substrates, such as plant debris, algae, water, and soil sediment. The relative abundance of Saprolegniaceae was higher in the cold to cool season than that in the warm to hot season of Korea. This study enhances our understanding of the diversity and ecological attributes of Saprolegniaceae in freshwater ecosystems. [ABSTRACT FROM AUTHOR]
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- 2022
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17. Seven Undescribed Aspergillus Species from Different Niches in Korea.
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Pangging, Monmi, Nguyen, Thuong T. T., and Lee, Hyang Burm
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ASPERGILLUS , *SPECIES , *MOLECULAR phylogeny , *TUBULINS , *LEAD in soils , *CHLOROPLAST DNA , *CALMODULIN - Abstract
An investigation of species of the genus Aspergillus present in arthropod, freshwater, and soil led to the discovery of seven undescribed species in Korea. Based on their morphological characteristics and molecular phylogeny analyses using a combined data set of β-tubulin (BenA) and calmodulin (CaM) sequences, the isolated strains CNUFC IGS2-5, CNUFC YJ1-19, CNUFC WD27, CNUFC U8-70, CNUFC AS2-24, CNUFC S32-1, and CNUFC U7-48, were identified as Aspergillus brunneoviolaceus, A. capensis, A. floccosus, A. inflatus, A. parvulus, A. polyporicola, and A. spelaeus, respectively. In the present study, the detailed morphological descriptions and phylogenetic relationships of these species are provided. [ABSTRACT FROM AUTHOR]
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- 2022
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18. Discovery of Three New Mucor Species Associated with Cricket Insects in Korea.
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Nguyen, Thuong T. T. and Lee, Hyang Burm
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CRICKETS (Insect) , *MUCOR , *SPECIES , *GENETIC markers , *INSECT diversity - Abstract
Species in the genus Mucor have a worldwide distribution and are isolated from various substrata and hosts, including soil, dung, freshwater, and fruits. However, their diversity from insects is still much too little explored. The aim of this study was to characterize three new species of Mucor: Mucor grylli sp. nov., M. hyangburmii sp. nov., and M. kunryangriensis sp. nov., discovered in Kunryang-ri, Cheongyang in the Chungnam Province of Korea, during an investigation of Mucorales from cricket insects. The new species are described using morphological characters and molecular data including ITS and LSU rDNA regions. Mucor grylli is characterized by the highly variable shape of its columellae, which are subglobose to oblong, obovoid, strawberry-shaped, and sometimes slightly or strongly constricted in the center. Mucor hyangburmii is characterized by the production of azygospores and growth at 40 °C. Mucor kunryangriensis is characterized by the variable shape of its columellae, which are elongated-conical, obovoid, cylindrical ellipsoid, cylindrical, and production of abundant yeast-like cells on PDA, MEA, and SMA media. Based on the sequence analysis of two genetic markers, our phylogenic assessment strongly supported M. grylli, M. hyangburmii, and M. kunryangriensis as new species. Detailed descriptions, illustrations, and phylogenetic trees are provided. [ABSTRACT FROM AUTHOR]
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- 2022
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19. Two New Species and Three New Records of Ascomycetes in Korea.
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Nguyen, Thuong T. T., Hyo Jin Lim, So Jeong Chu, and Hyang Burm Lee
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ASCOMYCETES , *SPECIES , *CONIDIA , *DEXTROSE , *AGAR , *BIOLOGICAL laboratories , *POTATOES - Abstract
During a survey of plant-inhabiting fungi and water niches from Korea, noteworthy fungi were collected; among them, two new species, Paracamarosporium noviaquum sp. nov. and Phyllosticta gwangjuensis sp. nov., are described based on morphology and multi-gene phylogenies. Paracamarosporium noviaquum was characterized by its production of 1-celled and 2-celled conidia, forming conidiomata on only potato dextrose agar medium. Phyllosticta gwangjuensis was characterized by conidia hyaline, ovoid to ellipsoid shape, rounded at both ends, containing numerous guttulae or with a single large central guttule. Additional species were identified as Cosmospora lavitskiae, Monochaetia cameliae, and Roussoella doimaesalongensis, which are reported as new record species from Korea. Detailed descriptions and illustrations of these taxa are provided herein. [ABSTRACT FROM AUTHOR]
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- 2022
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20. New Species and Eight Undescribed Species Belonging to the Families Aspergillaceae and Trichocomaceae in Korea.
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Nguyen, Thuong T. T., Kyo Jang Kwan Noh, and Hyang Burm Lee
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RNA polymerases , *SPECIES , *MOLECULAR phylogeny , *SPECIES distribution , *INSECT diversity - Abstract
During a survey of fungal diversity associated with insects, mud, soil, and freshwater niches in different areas in Korea, nine interesting fungal strains were isolated. Based on their morphological characteristics and molecular phylogeny analyses, using a combined data set of b-tubulin (BenA), calmodulin (CaM), and second largest subunit of RNA polymerase (RPB2) sequences, the strains CNUFC AM-44, CNUFC JCW3-4, CNUFC S708, CNUFC WT202, CNUFC AS1-29, CNUFC JCW3-5, CNUFC JDP37, and CNUFC JDP62 were identified as Aspergillus alabamensis, A. floridensis, A. subversicolor, Penicillium flavigenum, P. laevigatum, P. lenticrescens, Talaromyces adpressus, and T. beijingensis, respectively. The strain CNUFC JT1301 belongs to series Westlingiorum in section Citrina and is phylogenetically related to P. manginii. However, slow growth when cultivated on CYA, MEA, CREA is observed and the property can be used to easily distinguish the new species from these species. Additionally, P. manginii is known to produce sclerotia, while CNUFC JT1301 strain does not. Herein, the new fungal species is proposed as P. aquadulcis sp. nov. Eight species, A. alabamensis, A. floridensis, A. subversicolor, P. flavigenum, P. laevigatum, P. lenticrescens, T. adpressus, and T. beijingensis, have not been previously reported in Korea. The present study expands the known distribution of fungal species belonging to the families Aspergillaceae and Trichocomaceae in Korea. [ABSTRACT FROM AUTHOR]
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- 2021
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21. Novel Mucor species (Mucoromycetes, Mucoraceae) from northern Thailand.
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Hurdeal, Vedprakash G., Gentekaki, Eleni, Hyde, Kevin D., Nguyen, Thuong T. T., and Hyang Burm Lee
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MUCOR ,SPECIES ,RIBOSOMAL RNA ,SOIL fungi ,MOLECULAR phylogeny - Abstract
Mucor species are common fast-growing fungi found in soil. Two new species of Mucor and one new geographical record of M. nederlandicus were collected from northern Thailand and are described in this study. Evidence from morphophysiological data and phylogenetic analysis supports the introduction of the new taxa. Phylogenetic analysis based on the internal transcribed spacer (ITS) and large subunit of the nuclear ribosomal RNA (LSU) data showed that the new isolates cluster distinctly from other Mucor species with high or maximum bootstrap support. Mucor aseptatophorus is characterized by aseptate sporangiophores, globose columella, resistant and deliquescent sporangia, has sympodial, and monopodial branches and shows growth at 37 °C. It also differs from M. irregularis in having smaller sporangiospores, and larger sporangia. Mucor chiangraiensis has subglobose or slightly elongated globose columella, produces hyaline sporangiospores, and resistant and deliquescent sporangia. Furthermore, this species has wider sporangiophore, smaller sporangia and lower growth than M. nederlandicus. A detailed description of the species and illustrations are provided for the novel species. [ABSTRACT FROM AUTHOR]
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- 2021
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22. Discovery and Extrolite Production of Three New Species of Talaromyces Belonging to Sections Helici and Purpurei from Freshwater in Korea.
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Nguyen, Thuong T. T., Frisvad, Jens Christian, Kirk, Paul M., Hyo Jin Lim, and Hyang Burm Lee
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TALAROMYCES , *HELICIDAE , *FRESHWATER fungi , *PHYLOGENY , *FUNGI classification - Abstract
Three novel fungal species, Talaromyces gwangjuensis, T. koreana, and T. teleomorpha were found in Korea during an investigation of fungi in freshwater. The new species are described here using morphological characters, a multi-gene phylogenetic analysis of the ITS, BenA, CaM, RPB2 regions, and extrolite data. Talaromyces gwangjuensis is characterized by restricted growth on CYA, YES, monoverticillate and biverticillate conidiophores, and globose smooth-walled conidia. Talaromyces koreana is characterized by fast growth on MEA, biverticillate conidiophores, or sometimes with additional branches and the production of acid on CREA. Talaromyces teleomorpha is characterized by producing creamish-white or yellow ascomata on OA and MEA, restricted growth on CREA, and no asexual morph observed in the culture. A phylogenetic analysis of the ITS, BenA, CaM, and RPB2 sequences showed that the three new taxa form distinct monophyletic clades. Detailed descriptions, illustrations, and phylogenetic trees are provided. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
23. Seven New Records of Penicillium Species Belonging to Section Lanata-Divaricata in Korea.
- Author
-
Monmi Pangging, Nguyen, Thuong T. T., and Hyang Burm Lee
- Subjects
- *
PENICILLIUM , *CHLOROPLAST DNA , *TUBULINS , *SPECIES , *SOIL sampling , *CALMODULIN , *RECOMBINANT DNA - Abstract
Penicillium species are known to be ubiquitous environmental saprophytes. In the survey of diversity of genus Penicillium, seven new records of Penicillium species belonging to section Lanata-Divaricata were isolated from freshwater and soil samples collected from different locations in Korea. Based on morphological characteristics and multilocus phylogenetic analysis of the rDNA internal transcribed spacer region (ITS), b-tubulin (BenA), and calmodulin (CaM) genes, the isolated strains were identified as P. annulatum, P. camponotum, P. echinulonalgiovense, P. globosum, P. limosum, P. onobense, and P. yunnanense, respectively. This study presents detailed phylogenetic analyses and morphological descriptions of these species that contribute to section Lanata-Divaricata in Korea. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
24. Discovery of Novel Backusella (Backusellaceae, Mucorales) Isolated from Invertebrates and Toads in Cheongyang, Korea.
- Author
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Nguyen, Thuong T. T., Voigt, Kerstin, Cabral Monteiro de Azevedo Santiago, André Luiz, Kirk, Paul M., and Hyang Burm Lee
- Subjects
- *
TOADS , *RIBOSOMAL DNA , *MUCORALES , *CHLAMYDOSPORES , *PHYLOGENY , *TAXONOMY - Abstract
Three novel fungal species, Backusella chlamydospora sp. nov., B. koreana sp. nov., and B. thermophila sp. nov., as well as two new records, B. oblongielliptica and B. oblongispora, were found in Cheongyang, Korea, during an investigation of fungal species from invertebrates and toads. All species are described here using morphological characters and sequence data from internal transcribed spacer sequences of ribosomal DNA and large subunit of the ribosomal DNA. Backusella chlamydospora is different from other Backusella species by producing chlamydospores. Backusella koreana can be distinguished from other Backusella species by producing abundant yeast-like cells. Backusella thermophila is characterized by a variable (subglobose toThree novel fungal species, Backusella chlamydospora sp. nov., B. koreana sp. nov., and B. thermophila sp. nov., as well as two new records, B. oblongielliptica and B. oblongispora, were found in Cheongyang, Korea, during an investigation of fungal species from invertebrates and toads. All species are described here using morphological characters and sequence data from internal transcribed spacer sequences of ribosomal DNA and large subunit of the ribosomal DNA. Backusella chlamydospora is different from other Backusella species by producing chlamydospores. Backusella koreana can be distinguished from other Backusella species by producing abundant yeast-like cells. Backusella thermophila is characterized by a variable (subglobose to oblong, applanate to oval, conical and ellipsoidal to pyriform) columellae and grows well at 37 °C. Multigene phylogenetic analyses of the combined ITS and LSU rDNA sequences data generated from maximum likelihood and MrBayes analyses indicate that B. chlamydospora, B. koreana, and B. thermophila form distinct lineages in the family Backusellaceae. Detailed descriptions, illustrations, phylogenetic tree, and taxonomic key to the Backusella species present in Korea are provided. oblong, applanate to oval, conical and ellipsoidal to pyriform) columellae and grows well at 37 °C. Multigene phylogenetic analyses of the combined ITS and LSU rDNA sequences data generated from maximum likelihood and MrBayes analyses indicate that B. chlamydospora, B. koreana, and B. thermophila form distinct lineages in the family Backusellaceae. Detailed descriptions, illustrations, phylogenetic tree, and taxonomic key to the Backusella species present in Korea are provided. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
25. Six Newly Recorded Fungal Taxa from Freshwater Niche in Korea.
- Author
-
Lim, Hyo Jin, Nguyen, Thuong T. T, and Lee, Hyang Burm
- Subjects
- *
FRESH water , *TALAROMYCES , *ACREMONIUM , *ASCOMYCETES - Abstract
Six interesting fungal strains were isolated during a survey of fungal diversity associated with freshwater; these strains were designated as CNUFC YJW2-22, CNUFC MSW11-6-2, CNUFC HRS5-3, CNUFC MSW242-6, CNUFC DMW2-2, and CNUFC CPWS-1. Based on a polyphasic approach including phylogenetic analyses of internal transcribed space (ITS), large subunit (LSU), beta-tubulin (BenA), and calmodulin (CaM) gene sequences, morphological analyses, the six strains were found to be identical to Acremonium guillematii, Cadophora novi-eboraci, Lectera nordwiniana, Mycoarthris corallina, Talaromyces siamensis, and Tetracladium globosum, respectively. To our knowledge, these are the first records of the rare Lectera, Mycoarthris, and Tetracladium genera in Korea, and the first reports of A. guillematii, C. novi-eboraci, L. nordwiniana, M. corallina, T. siamensis, and Te. globosum in a freshwater environment. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
26. Five New Records of the Family Aspergillaceae in Korea, Aspergillus europaeus, A. pragensis, A. tennesseensis, Penicillium fluviserpens, and P. scabrosum.
- Author
-
Nguyen, Thuong T. T., Monmi Pangging, Bangash, Naila Khan, and Hyang Burm Lee
- Subjects
- *
PENICILLIUM , *ASPERGILLUS , *SEQUENCE analysis , *PHYLOGENY - Abstract
During an investigation of the fungi from the Aspergillaceae family obtained from different environmental sources in Korea, we isolated six strains, including CNUFC WJC9-1, CNUFC BPM36-33, CNUFC MSW6, CNUFC ESW1, CNUFC TM6-2, and CNUFC WD17-1. The morphology and phylogeny of these isolates were analyzed based on their partial b-tubulin (BenA) and calmodulin (CaM) gene sequences. Based on the morphological characteristics and sequence analyses, the isolates CNUFC WJC9-1, CNUFC BPM36-33, CNUFC TM6-2, and CNUFC WD17-1 were identified as A. europaeus, A. pragensis, Penicillium fluviserpens, and P. scabrosum, respectively, and isolates CNUFC MSW6 and CNUFC ESW1 were identified as A. tennesseensis. To the best of our knowledge, the species A. europaeus, A. pragensis, A. tennesseensis, P. fluviserpens, and P. scabrosum have not been previously reported in Korea. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
27. Isolation and Characterization of Four Unrecorded Mucor Species in Korea.
- Author
-
Nguyen, Thuong T. T., Jeon, Yu Jeong, Mun, Hye Yeon, Goh, Jaeduk, Chung, Namil, and Lee, Hyang Burm
- Subjects
- *
MUCOR , *SEDIMENT sampling , *SPECIES , *INVESTIGATIONS , *PHYLOGENY - Abstract
During an investigation of fungi of the order Mucorales from freshwater and sediment samples in Korea, we isolated six strains, NNIBRFG6649, NNIBRFG6255, NNIBRFG1498, CNUFC-YJ13, CNUFC-YR7, and NNIBRFG2739. The morphology and phylogeny of these strains were analyzed. Based on the morphological characteristics and molecular data from internal transcribed spacer (ITS) region, the isolates NNIBRFG6649 and NNIBRFG6255 were identified as Mucor abundans, and M. aligarensis, respectively. The isolates NNIBRFG1498 and CNUFC-YJ13 were identified as M. moelleri, whereas the isolates CNUFC-YR7 and NNIBRFG2739 were identified as M. heterogamus. To the best of our knowledge, M. abundans, M. aligarensis, M. moelleri, and M. heterogamus have not yet been reported in Korea. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
28. New Records of Four Species Belonging to Eurotiales from Soil and Freshwater in Korea.
- Author
-
Pangging, Monmi, Nguyen, Thuong T. T., and Lee, Hyang Burm
- Subjects
- *
SPECIES , *TALAROMYCES , *PENICILLIUM , *SOIL sampling , *SOILS , *MOUNTAIN soils - Abstract
Four strains of Penicillium and Talaromyces species are described and illustrated in an inventory of fungal species belonging to Eurotiales. The strains, CNUFC-DDS17-1, CNUFC-DDS27-1, CNUFC-PTM72-1, and CNUFC-YJW3-31, were isolated from soil and freshwater samples from South Korea. Based on their morphological characteristics and sequence analyses by the combined β-tubulin and calmodulin gene, the CNUFC-DDS17-1, CNUFC-DDS27-1, CNUFC-PTM72-1, and CNUFC-YJW3-31 isolates were identified as Penicillium pasqualense, Penicillium sanguifluum, Talaromyces apiculatus, and Talaromyces liani, respectively. The designated strains were found to represent a previously undescribed species of Korean fungal biota. In this study, detailed morphological descriptions and phylogenetic relationships of these species are provided. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
29. Characterization of Achlya americana and A. bisexualis (Saprolegniales, Oomycota) Isolated from Freshwater Environments in Korea.
- Author
-
Choi, Young-Joon, Lee, Seo Hee, Nguyen, Thuong T. T., Nam, Bora, and Lee, Hyang Burm
- Subjects
FRESHWATER fishes ,RICE ,AQUACULTURE industry ,FRESH water ,OOMYCETES - Abstract
Many members of the Saprolegniales (Oomycete) cause mycoses and disorders of fishes, of which Achlya and Saprolegnia are most ubiquitous genera worldwide. During a survey of the diversity of freshwater oomycetes in Korea, we collected seven isolates of Achlya, for which morphological and molecular phylogenetic analyses enabled them to identify as Achlya americana and Achlya bisexualis. In Korea, only a species of Achlya, A. prolifera, has been previously found to cause seedling rot on rice (Oryza sativa), but none of the two species have been reported yet. Importantly, A. bisexualis was isolated from a live fish, namely rice fish (Oryzias sinensis), as well as freshwater, and this is the first report of Achlya-causing mycoses on freshwater fishes in Korea. The presence of A. americana and A. bisexualis on live fish in Korea should be closely monitored, as considering the well-known broad infectivity of these species it has the potential to cause an important emerging disease on aquaculture industry. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
30. Molecular and Morphological Confirmation of Three Undescribed Species of Mortierella from Korea.
- Author
-
Nguyen, Thuong T. T., Park, Se Won, Pangging, Monmi, and Lee, Hyang Burm
- Subjects
- *
MORTIERELLA , *RHIZOSPHERE , *SPECIES , *RIBOSOMAL DNA , *NUCLEOTIDE sequence , *SOIL sampling - Abstract
Three fungal isolates designated as CNUFC-YR329-1, CNUFC-PTS103-1, and CNUFC-PTS2-1 were discovered during a survey of fungal diversity of the order Mortierellales from freshwater and pine tree rhizosphere soil samples in Korea. The strains were analyzed morphologically and phylogenetically based on the internal transcribed spacer (ITS) and large subunit (LSU) of ribosomal DNA gene sequences. Based on their morphology and phylogeny, the three isolates were identified as Mortierella elongata, M. horticola, and M. humilis, respectively. To the best of our knowledge, M. elongata, M. horticola, and M. humilis, belonging to an undiscovered taxon, have not been previously described in Korea. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
31. First Records of Rare Ascomycete Fungi, Acrostalagmus luteoalbus, Bartalinia robillardoides, and Collariella carteri from Freshwater Samples in Korea.
- Author
-
Nguyen, Thuong T. T., Hee Lee, Seo, Jeong Jeon, Sun, and Burm Lee, Hyang
- Subjects
- *
FUNGI , *FRESH water , *RECOMBINANT DNA , *RECORDS , *DILUTION , *ASCOMYCETES - Abstract
The distribution and occurrence of rare ascomycete fungi within freshwater samples in Korea was investigated. Three rare fungal strains, CNUFC-YR537-1, CNUFC-CNUP1-1, and CNUFC-NDR3-1, were isolated using serial dilution method. On the basis of their morphological characteristics and phylogenetic analysis of their internal transcribed spacer regions and 28S rDNA sequences, the three isolates were identified as Acrostalagmus luteoalbus, Bartalinia robillardoides, and Collariella carteri, respectively. To our knowledge, these are the first records of rare genera Acrostalagmus, Bartalinia, and Collariella from Korea, and the first reports of A. luteoalbus, B. robillardoides, and C. carteri from freshwater samples. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
32. Characterization of Three Species of Sordariomycetes Isolated from Freshwater and Soil Samples in Korea.
- Author
-
Lee, Seo Hee, Park, Hyo Sun, Nguyen, Thuong T. T., and Lee, Hyang Burm
- Subjects
SOIL sampling ,RNA polymerase II ,SPECIES ,STACHYBOTRYS ,FRESH water - Abstract
During a survey of fungal diversity in the class Sordariomycetes, 3 fungal strains, CNUFCKMHY6-1, CNUFC-MSW24-2-11, and CNUFC-GW2S-4 were isolated from soil and freshwater samples, respectively in Korea. The strains were analyzed both morphologically and phylogenetically on the basis of internal transcribed spacer and RNA polymerase II second largest subunit gene sequences. On the basis of their morphology and phylogeny, CNUFC-KMHY6-1, CNUFC-MSW24-2-11, and CNUFC-GW2S-4 isolates were identified as Arcopilus aureus, Memnoniella echinata, and Stachybotrys sansevieriae, respectively. To the best of our knowledge, Ar. aureus and M. echinata have not been previously recorded in Korea, and this is the first report of S. sansevieriae from freshwater niche. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
33. Characterization of Three Species of Sordariomycetes Isolated from Freshwater and Soil Samples in Korea.
- Author
-
Seo Hee Lee, Hyo Sun Park, Nguyen, Thuong T. T., and Hyang Burm Lee
- Subjects
SOIL sampling ,RNA polymerase II ,SPECIES ,STACHYBOTRYS ,FRESH water - Abstract
During a survey of fungal diversity in the class Sordariomycetes, 3 fungal strains, CNUFCKMHY6- 1, CNUFC-MSW24-2-11, and CNUFC-GW2S-4 were isolated from soil and freshwater samples, respectively in Korea. The strains were analyzed both morphologically and phylogenetically on the basis of internal transcribed spacer and RNA polymerase II second largest subunit gene sequences. On the basis of their morphology and phylogeny, CNUFC-KMHY6-1, CNUFC-MSW24-2-11, and CNUFC-GW2S-4 isolates were identified as Arcopilus aureus, Memnoniella echinata, and Stachybotrys sansevieriae, respectively. To the best of our knowledge, Ar. aureus and M. echinata have not been previously recorded in Korea, and this is the first report of S. sansevieriae from freshwater niche. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
34. Four New Records of Ascomycete Species from Korea.
- Author
-
Nguyen, Thuong T. T., Pangging, Monmi, Seo Hee Lee, and Hyang Burm Lee
- Subjects
- *
ASCOMYCETES , *FUNGI diversity , *FUNGAL morphology , *FUNGAL phylogeny , *ISLANDS - Abstract
While evaluating fungal diversity in freshwater, grasshopper feces, and soil collected at Dokdo Island in Korea, four fungal strains designated CNUFC-DDS14-1, CNUFC-GHD05-1, CNUFC-DDS47-1, and CNUFC-NDR5-2 were isolated. Based on combination studies using phylogenies and morphological characteristics, the isolates were confirmed as Ascodesmis sphaerospora, Chaetomella raphigera, Gibellulopsis nigrescens, and Myrmecridium schulzeri, respectively. This is the first records of these four species from Korea. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
35. Isolation and Characterization of Three Zygomycetous Fungi in Korea: Backusella circina, Circinella muscae, and Mucor ramosissimus.
- Author
-
Nguyen, Thuong T. T. and Hyang Burm Lee
- Subjects
- *
FUNGI classification , *FUNGAL morphology , *FUNGAL phylogeny , *NUCLEOTIDE sequence , *POLYGALACTURONASE - Abstract
While surveying undiscovered fungal taxa in Korea, three rare zygomycetous fungal strains, CNUFC-PTF2-1, CNUFC-TF3-1, and CNUFC-ESAF3-1, were isolated from soil, leaf, and freshwater samples, respectively. The strains were analyzed morphologically as well as phylogenetically based on the internal transcribed spacer region and 28S rDNA sequences. Sequence analysis of the two loci revealed that the isolates, CNUFC-PTF2-1, CNUFC-TF3-1, and CNUFC-ESAF3-1, were identified as Backusella circina, Circinella muscae, and Mucor ramosissimus, respectively. These species have not yet been previously described in Korea. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
36. Isolation and Characterization of Two Rare Mucoralean Species with Specific Habitats.
- Author
-
Seo Hee Lee, Nguyen, Thuong T. T., and Hyang Burm Lee
- Subjects
- *
MUCORALES , *PHYLOGENY , *RARE fungi , *ZYGOMYCETES , *RIBOSOMAL DNA - Abstract
The order Mucorales, the largest in number of species within the Mucoromycotina, comprises typically fast-growing saprotrophic fungi. During a study o f the fungal diversity of undiscovered taxa in Korea, two novel mucoralean strains, CNUFC-GWD3-9 and CNUFCEGF1-4, were isolated from specific habitats including freshwater and fecal samples, respectively. On the basis of their morphological characteristics and sequence analyses o f internal transcribed spacer and large subunit ribosomal DNA, the CNUFC-GWD3-9 and CNUFC-EGF1-4 isolates were confirmed to be Gilbertella persicaria and Pilobolus crystallinus, respectively. It is ecologically, pathologically, and mycologically significant to find such rare zygomycetous fungi in such specific habitats. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
37. Characterization of Two Species of Acremonium (Unrecorded in Korea) from Soil Samples: A. variecolor and A. persicinum.
- Author
-
Se Won Park, Nguyen, Thuong T. T., and Hyang Burm Lee
- Subjects
- *
ACREMONIUM , *FUNGI diversity , *SEQUENCE analysis , *RIBOSOMAL DNA , *BIODIVERSITY - Abstract
During a survey of fungal diversity of the order Hypocreales in Korea, two Acremonium isolates, CNUFC-1YSRS2-4 and CNUFC-GSNPF3-1, were isolated from soils collected on a bank of the Yeongsan River, Naju, and in a forest on the Mt. Daegak located on Sinsi Island, Gunsan, South Korea, respectively. Based on the morphological characteristics and sequence analysis of the internal transcribed spacer and D1/D2 domains of 28S ribosomal DNA, the isolates CNUFC-1YSRS2-4 and CNUFC-GSNPF3-1 were identified as A. variecolor and A. persicinum, respectively. These 2 species represent novel Hypocreales isolates in Korea. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
38. Phylogenetic Status of Two Undescribed Zygomycete Species from Korea: Actinomucor elegans and Mucor minutus.
- Author
-
Nguyen, Thuong T. T., Hee-Young Jung, Youn Su Lee, Voigt, Kerstin, and Hyang Burm Lee
- Subjects
- *
FUNGI diversity , *MUCORALES , *BIODIVERSITY , *PHYLOGENY , *MORPHOLOGY - Abstract
During a survey of fungal diversity of the order Mucorales, three zygomycete isolates, CNUFC-YR113-1, CNUFCKNU16-7, and CNUFC-BS1-1 were isolated from freshwater and soil samples in Korea. The strains were analyzed both morphologically and phylogenetically based on internal transcribed spacer and 28S rDNA gene sequences. Based on their morphology and phylogeny, the CNUFC-YR113-1 and CNUFC-KNU16-7 isolates were identified as Actinomucor elegans, and CNUFC-BS1-1 was identified as Mucor minutus. To the best of our knowledge, the species A. elegans and M. minutus, belonging to an undiscovered taxon, have not been previously described in Korea. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
39. Isolation and Characterization of Three Unrecorded Zygomycete Fungi in Korea: Cunninghamella bertholletiae, Cunninghamella echinulata, and Cunninghamella elegans.
- Author
-
Nguyen, Thuong T. T., Young-Joon Choi, and Hyang Burm Lee
- Subjects
- *
FUNGI , *RECOMBINANT DNA , *PHYLOGENY , *FUNGI diversity , *CRYPTOGAMS , *FUNGAL ecology - Abstract
In a survey of undiscovered taxa in Korea, three zygomycete fungal strains-EML-W31, EML-HGD1-1, and EML-RUS1-1-were isolated from freshwater, grasshopper fecal, and soil samples in Korea. On the basis of the morphological characteristics and phylogenetic analysis of internal transcribed spacer and 28S rDNA, the isolates of EML-W31, EML-HGD1-1, and EML-RUS1-1 were confirmed to be Cunninghamella bertholletiae, Cunninghamella echinulata, and Cunninghamella elegans, respectively. These species have not been previously described in Korea. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
40. Aspergillus ullungdoensis sp. nov., Penicillium jeongsukae sp. nov., and other fungi from Korea.
- Author
-
Lee HB, Nguyen TTT, Noh SJ, Kim DH, Kang KH, Kim SJ, Kirk PM, Avery SV, Medina A, and Hallsworth JE
- Subjects
- Republic of Korea, DNA, Fungal genetics, Soil Microbiology, Aspergillus isolation & purification, Aspergillus classification, Aspergillus genetics, Sequence Analysis, DNA, Cluster Analysis, DNA, Ribosomal Spacer genetics, DNA, Ribosomal Spacer chemistry, Phylogeny, Penicillium isolation & purification, Penicillium classification, Penicillium genetics
- Abstract
Eurotiales fungi are thought to be distributed worldwide but there is a paucity of information about their occurrence on diverse substrates or hosts and at specific localities. Some of the Eurotiales, including Aspergillus and Penicillium species, produce an array of secondary metabolites of use for agricultural, medicinal, and pharmaceutical applications. Here, we carried out a survey of the Eurotiales in South Korea, focusing on soil, freshwater, and plants (dried persimmon fruits and seeds of Perilla frutescens, known commonly as shiso). We obtained 11 species that-based on morphology, physiology, and multi-locus (ITS, BenA, CaM, and RPB2) phylogenetic analyses-include two new species, Aspergillus ullungdoensis sp. nov. and Penicillium jeongsukae sp. nov., and nine species that were known, but previously not described in South Korea, Aspergillus aculeatinus, Aspergillus aurantiacoflavus, Aspergillus croceiaffinis, Aspergillus pseudoviridinutans, Aspergillus uvarum, Penicillium ferraniaense, Penicillium glaucoroseum, Penicillium sajarovii, and one, Penicillium charlesii, that was isolated from previously unknown host, woodlouse (Porcellio scaber). We believe that biodiversity survey and identifying new species can contribute to set a baseline for future changes in the context of humanitarian crises such as climate change., Competing Interests: Declaration of competing interest The authors have no known competing financial interests or personal relationships that could affect the work reported in this paper., (Copyright © 2024 British Mycological Society. Published by Elsevier Ltd. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
41. Mycotoxin production of Alternaria strains isolated from Korean barley grains determined by LC-MS/MS.
- Author
-
Nguyen TTT, Kim J, Jeon SJ, Lee CW, Magan N, and Lee HB
- Subjects
- Chromatography, Liquid, Chromatography, Thin Layer, Lactones analysis, Mycotoxins biosynthesis, Republic of Korea, Spectrometry, Mass, Electrospray Ionization, Tandem Mass Spectrometry, Alternaria isolation & purification, Alternaria metabolism, Edible Grain microbiology, Food Contamination analysis, Hordeum microbiology, Mycotoxins analysis
- Abstract
Twenty-four Alternaria strains were isolated from barley grain samples. These strains were screened for the production of mycotoxins on rice medium using thin layer chromatography. All 24 strains produced at least one of the five mycotoxins (ALT, AOH, ATX-I, AME, and TeA). Three representative strains, namely EML-BLDF1-4, EML-BLDF1-14, and EML-BLDF1-18, were further analyzed using a new LC-MS/MS-based mycotoxin quantification method. This method was used to detect and quantify Alternaria mycotoxins. We used positive ion electrospray mass spectrometry with multiple reaction mode (MRM) for the simultaneous quantification of various Alternaria mycotoxins produced by these strains. Five Alternaria toxins (ALT, ATX-I, AOH, AME, and TeA) were detected and quantified. Sample preparation included methanol extraction, concentration, and injection into LC-MS/MS. Limit of detection ranged from 0.13 to 4μg/mL and limit of quantification ranged from 0.25 to 8μg/mL., (Copyright © 2018 Elsevier B.V. All rights reserved.)
- Published
- 2018
- Full Text
- View/download PDF
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