31 results on '"Swinfield, Tom"'
Search Results
2. Thresholds for adding degraded tropical forest to the conservation estate
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Ewers, Robert M., Orme, C. David L., Pearse, William D., Zulkifli, Nursyamin, Yvon-Durocher, Genevieve, Yusah, Kalsum M., Yoh, Natalie, Yeo, Darren C. J., Wong, Anna, Williamson, Joseph, Wilkinson, Clare L., Wiederkehr, Fabienne, Webber, Bruce L., Wearn, Oliver R., Wai, Leona, Vollans, Maisie, Twining, Joshua P., Turner, Edgar C., Tobias, Joseph A., Thorley, Jack, Telford, Elizabeth M., Teh, Yit Arn, Tan, Heok Hui, Swinfield, Tom, Svátek, Martin, Struebig, Matthew, Stork, Nigel, Sleutel, Jani, Slade, Eleanor M., Sharp, Adam, Shabrani, Adi, Sethi, Sarab S., Seaman, Dave J. I., Sawang, Anati, Roxby, Gabrielle Briana, Rowcliffe, J. Marcus, Rossiter, Stephen J., Riutta, Terhi, Rahman, Homathevi, Qie, Lan, Psomas, Elizabeth, Prairie, Aaron, Poznansky, Frederica, Pillay, Rajeev, Picinali, Lorenzo, Pianzin, Annabel, Pfeifer, Marion, Parrett, Jonathan M., Noble, Ciar D., Nilus, Reuben, Mustaffa, Nazirah, Mullin, Katherine E., Mitchell, Simon, Mckinlay, Amelia R., Maunsell, Sarah, Matula, Radim, Massam, Michael, Martin, Stephanie, Malhi, Yadvinder, Majalap, Noreen, Maclean, Catherine S., Mackintosh, Emma, Luke, Sarah H., Lewis, Owen T., Layfield, Harry J., Lane-Shaw, Isolde, Kueh, Boon Hee, Kratina, Pavel, Konopik, Oliver, Kitching, Roger, Kinneen, Lois, Kemp, Victoria A., Jotan, Palasiah, Jones, Nick, Jebrail, Evyen W., Hroneš, Michal, Heon, Sui Peng, Hemprich-Bennett, David R., Haysom, Jessica K., Harianja, Martina F., Hardwick, Jane, Gregory, Nichar, Gray, Ryan, Gray, Ross E. J., Granville, Natasha, Gill, Richard, Fraser, Adam, Foster, William A., Folkard-Tapp, Hollie, Fletcher, Robert J., Fikri, Arman Hadi, Fayle, Tom M., Faruk, Aisyah, Eggleton, Paul, Edwards, David P., Drinkwater, Rosie, Dow, Rory A., Döbert, Timm F., Didham, Raphael K., Dickinson, Katharine J. M., Deere, Nicolas J., de Lorm, Tijmen, Dawood, Mahadimenakbar M., Davison, Charles W., Davies, Zoe G., Davies, Richard G., Dančák, Martin, Cusack, Jeremy, Clare, Elizabeth L., Chung, Arthur, Chey, Vun Khen, Chapman, Philip M., Cator, Lauren, Carpenter, Daniel, Carbone, Chris, Calloway, Kerry, Bush, Emma R., Burslem, David F. R. P., Brown, Keiron D., Brooks, Stephen J., Brasington, Ella, Brant, Hayley, Boyle, Michael J. W., Both, Sabine, Blackman, Joshua, Bishop, Tom R., Bicknell, Jake E., Bernard, Henry, Basrur, Saloni, Barclay, Maxwell V. L., Barclay, Holly, Atton, Georgina, Ancrenaz, Marc, Aldridge, David C., Daniel, Olivia Z., Reynolds, Glen, and Banks-Leite, Cristina
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- 2024
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3. Evaluating the impacts of a large-scale voluntary REDD+ project in Sierra Leone
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Malan, Mandy, Carmenta, Rachel, Gsottbauer, Elisabeth, Hofman, Paul, Kontoleon, Andreas, Swinfield, Tom, and Voors, Maarten
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- 2024
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4. Realizing the social value of impermanent carbon credits
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Balmford, Andrew, Keshav, Srinivasan, Venmans, Frank, Coomes, David, Groom, Ben, Madhavapeddy, Anil, and Swinfield, Tom
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- 2023
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5. A call to develop carbon credits for second-growth forests
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Brancalion, Pedro H. S., Balmford, Andrew, Wheeler, Charlotte E., Rodrigues, Ricardo R., Strassburg, Bernardo B. N., and Swinfield, Tom
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- 2024
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6. Carbon flux and forest dynamics: Increased deadwood decomposition in tropical rainforest tree‐fall canopy gaps
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Griffiths, Hannah M, Eggleton, Paul, Hemming‐Schroeder, Nicole, Swinfield, Tom, Woon, Joel S, Allison, Steven D, Coomes, David A, Ashton, Louise A, and Parr, Catherine L
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Biological Sciences ,Ecology ,Life on Land ,Carbon ,Carbon Cycle ,Ecosystem ,Forests ,Rainforest ,Trees ,Tropical Climate ,carbon cycling ,carbon modelling ,disturbance ,global change ,invertebrates ,termites ,tree mortality ,Environmental Sciences ,Biological sciences ,Earth sciences ,Environmental sciences - Abstract
Tree mortality rates are increasing within tropical rainforests as a result of global environmental change. When trees die, gaps are created in forest canopies and carbon is transferred from the living to deadwood pools. However, little is known about the effect of tree-fall canopy gaps on the activity of decomposer communities and the rate of deadwood decay in forests. This means that the accuracy of regional and global carbon budgets is uncertain, especially given ongoing changes to the structure of rainforest ecosystems. Therefore, to determine the effect of canopy openings on wood decay rates and regional carbon flux, we carried out the first assessment of deadwood mass loss within canopy gaps in old-growth rainforest. We used replicated canopy gaps paired with closed canopy sites in combination with macroinvertebrate accessible and inaccessible woodblocks to experimentally partition the relative contribution of microbes vs. termites to decomposition within contrasting understorey conditions. We show that over a 12 month period, wood mass loss increased by 63% in canopy gaps compared with closed canopy sites and that this increase was driven by termites. Using LiDAR data to quantify the proportion of canopy openings in the study region, we modelled the effect of observed changes in decomposition within gaps on regional carbon flux. Overall, we estimate that this accelerated decomposition increases regional wood decay rate by up to 18.2%, corresponding to a flux increase of 0.27 Mg C ha-1 year-1 that is not currently accounted for in regional carbon budgets. These results provide the first insights into how small-scale disturbances in rainforests can generate hotspots for decomposer activity and carbon fluxes. In doing so, we show that including canopy gap dynamics and their impacts on wood decomposition in forest ecosystems can help improve the predictive accuracy of the carbon cycle in land surface models.
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- 2021
7. Avifauna recovers faster in areas less accessible to trapping in regenerating tropical forests
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Sagar, H.S. Sathya Chandra, Gilroy, James J., Swinfield, Tom, Burivalova, Zuzana, Yong, Ding Li, Gemita, Elva, Novriyanti, Novriyanti, Lee, David C., Janra, Muhammad Nazri, Balmford, Andrew, and Hua, Fangyuan
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- 2023
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8. Developing hierarchical density-structured models to study the national-scale dynamics of an arable weed
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Goodsell, Robert M., Childs, Dylan Z., Spencer, Matthew, Coutts, Shaun, Vergnon, Remi, Swinfield, Tom, Queenborough, Simon A., and Freckleton, Robert P.
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- 2021
9. Restoration concessions : a second lease on life for beleaguered tropical forests?
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Harrison, Rhett D, Swinfield, Tom, Ayat, Asep, Dewi, Sonya, Silalahi, Mangara, and Heriansyah, Ika
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- 2020
10. Maximizing the value of forest restoration for tropical mammals by detecting three-dimensional habitat associations
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Deere, Nicolas J., Guillera-Arroita, Gurutzeta, Swinfield, Tom, Milodowski, David T., Coomes, David A., Bernard, Henry, Reynolds, Glen, Davies, Zoe G., and Struebig, Matthew J.
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- 2020
11. Recovery of logged forest fragments in a human-modified tropical landscape during the 2015-16 El Niño
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Nunes, Matheus Henrique, Jucker, Tommaso, Riutta, Terhi, Svátek, Martin, Kvasnica, Jakub, Rejžek, Martin, Matula, Radim, Majalap, Noreen, Ewers, Robert M., Swinfield, Tom, Valbuena, Rubén, Vaughn, Nicholas R., Asner, Gregory P., and Coomes, David A.
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- 2021
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12. The need for long-term remedies for Indonesia's forest fires
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Chisholm, Ryan A., Wijedasa, Lahiru S., and Swinfield, Tom
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- 2016
13. Recommendations to enhance breeding bird diversity in managed plantation forests determined using LiDAR.
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Tew, Eleanor R., Conway, Greg J., Henderson, Ian G., Milodowski, David T., Swinfield, Tom, and Sutherland, William J.
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BIRD diversity ,BIRD populations ,FOREST biodiversity ,BIRD breeding ,TREE farms ,SPECIES diversity ,LIDAR ,DEAD trees - Abstract
Widespread afforestation is a crucial component of climate mitigation strategies worldwide. This presents a significant opportunity for biodiversity conservation if forests are appropriately managed. Within forests, structural and habitat diversity are known to be critical for biodiversity but pragmatic management recommendations are lacking. We make a comprehensive assessment of the effects of habitat variables on bird populations using data from over 4000 ha of forested landscape. We combine high‐resolution remote sensing data with comprehensive management databases to classify habitat attributes and measure the response of six taxonomic and functional diversity metrics: species richness, Shannon diversity, functional richness, functional evenness, functional divergence, and functional dispersion. We use a novel approach that combines hierarchical partitioning analysis with linear models to determine the relative importance of different habitat variables for each bird diversity metric. The age class of forest stands was consistently the most important variable across all bird diversity metrics, outperforming other structural measures such as horizontal and vertical heterogeneity and canopy density. Shrub density and gap fraction were each significantly associated with one bird diversity metric. In contrast, variables describing within‐stand structural heterogeneity (vertical and horizontal) were generally less important while tree species identity (e.g., conifer or broadleaved) was not significant for any bird diversity metric. Each of the six bird diversity metrics had different patterns of independent variable importance and significance, emphasizing the need to consider multiple diversity metrics in biodiversity assessments. Similarly, the optimal resolution for remote sensing metrics varied between structural variables and bird diversity metrics, suggesting that the use of remote sensing data in biodiversity studies could be greatly improved by first exploring different resolutions and data aggregations. Based on the results from this comprehensive study, we recommend that managers focus on creating habitat diversity at the between‐, rather than exclusively within‐stand scale, such as by creating a matrix of different age classes, to maximize bird diversity. This recommendation for forest managers is powerful yet pragmatic in its simplicity. [ABSTRACT FROM AUTHOR]
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- 2022
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14. The impact of logging on vertical canopy structure across a gradient of tropical forest degradation intensity in Borneo.
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Milodowski, David T., Coomes, David A., Swinfield, Tom, Jucker, Tommaso, Riutta, Terhi, Malhi, Yadvinder, Svátek, Martin, Kvasnica, Jakub, Burslem, David F. R. P., Ewers, Robert M., Teh, Yit Arn, and Williams, Mathew
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TROPICAL forests ,FOREST degradation ,LOGGING ,FOREST monitoring ,FOREST surveys ,AIRBORNE lasers - Abstract
Forest degradation through logging is pervasive throughout the world's tropical forests, leading to changes in the three‐dimensional canopy structure that have profound consequences for wildlife, microclimate and ecosystem functioning. Quantifying these structural changes is fundamental to understanding the impact of degradation, but is challenging in dense, structurally complex forest canopies.We exploited discrete‐return airborne LiDAR surveys across a gradient of logging intensity in Sabah, Malaysian Borneo, and assessed how selective logging had affected canopy structure (Plant Area Index, PAI, and its vertical distribution within the canopy).LiDAR products compared well to independent, analogue models of canopy structure produced from detailed ground‐based inventories undertaken in forest plots, demonstrating the potential for airborne LiDAR to quantify the structural impacts of forest degradation at landscape scale, even in some of the world's tallest and most structurally complex tropical forests.Plant Area Index estimates across the plot network exhibited a strong linear relationship with stem basal area (R2 = 0.95). After at least 11–14 years of recovery, PAI was ~28% lower in moderately logged plots and ~52% lower in heavily logged plots than that in old‐growth forest plots. These reductions in PAI were associated with near‐complete lack of trees >30‐m tall, which had not been fully compensated for by increasing plant area lower in the canopy. This structural change drives a marked reduction in the diversity of canopy environments, with the deep, dark understorey conditions characteristic of old‐growth forests far less prevalent in logged sites. Full canopy recovery is likely to take decades.Synthesis and applications. Effective management and restoration of tropical forests requires detailed monitoring of the forest and its environment. We demonstrate that airborne LiDAR can effectively map the canopy architecture of the complex tropical forests of Borneo, capturing the three‐dimensional impact of degradation on canopy structure at landscape scales, therefore facilitating efforts to restore and conserve these ecosystems. [ABSTRACT FROM AUTHOR]
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- 2021
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15. Leech blood‐meal invertebrate‐derived DNA reveals differences in Bornean mammal diversity across habitats.
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Drinkwater, Rosie, Jucker, Tommaso, Potter, Joshua H. T., Swinfield, Tom, Coomes, David A., Slade, Eleanor M., Gilbert, M. Thomas P., Lewis, Owen T., Bernard, Henry, Struebig, Matthew J., Clare, Elizabeth L., and Rossiter, Stephen J.
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MAMMAL diversity ,DNA ,LEECHES ,FOREST degradation ,HABITATS - Abstract
The application of metabarcoding to environmental and invertebrate‐derived DNA (eDNA and iDNA) is a new and increasingly applied method for monitoring biodiversity across a diverse range of habitats. This approach is particularly promising for sampling in the biodiverse humid tropics, where rapid land‐use change for agriculture means there is a growing need to understand the conservation value of the remaining mosaic and degraded landscapes. Here we use iDNA from blood‐feeding leeches (Haemadipsa picta) to assess differences in mammalian diversity across a gradient of forest degradation in Sabah, Malaysian Borneo. We screened 557 individual leeches for mammal DNA by targeting fragments of the 16S rRNA gene and detected 14 mammalian genera. We recorded lower mammal diversity in the most heavily degraded forest compared to higher quality twice logged forest. Although the accumulation curves of diversity estimates were comparable across these habitat types, diversity was higher in twice logged forest, with more taxa of conservation concern. In addition, our analysis revealed differences between the community recorded in the heavily logged forest and that of the twice logged forest. By revealing differences in mammal diversity across a human‐modified tropical landscape, our study demonstrates the value of iDNA as a noninvasive biomonitoring approach in conservation assessments. [ABSTRACT FROM AUTHOR]
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- 2021
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16. Monitoring ash dieback (Hymenoscyphus fraxineus) in British forests using hyperspectral remote sensing.
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Chan, Aland H. Y., Barnes, Chloe, Swinfield, Tom, Coomes, David A., He, Kate, and Zlinszky, András
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DIEBACK ,REMOTE sensing ,MULTISPECTRAL imaging ,FISHER discriminant analysis ,TEMPERATE forests ,ASH (Tree) - Abstract
Large‐scale dieback of ash trees (Fraxinus spp.) caused by the fungus Hymenoscyphus fraxineus is posing an immense threat to forest health in Europe, requiring effective monitoring at large scales. In this study, a pipeline was created to find ash trees and classify dieback severity using high‐resolution hyperspectral imagery of individual tree crowns (ITCs). Hyperspectral data were collected in four forest sites near Cambridge, UK, where 422 ITCs were manually delineated and labelled using field‐measurements of species and dieback severity (for ash trees). Four algorithms, namely linear discriminant analysis (LDA), principal components analysis coupled with LDA (PCA‐LDA), partial least squares discriminant analysis (PLS‐DA) and random forest (RF), were used to build classification models for species and dieback severity classification. The effect of dark‐pixel filtering on classification accuracy was evaluated. The best performing models were then coupled with automatic ITC segmentation to map species and ash dieback distribution over 16.8 hectares of woodland. We calculated and partitioned the coefficient of variation (CV) of the reflected ash spectra to find variable wavebands associated with dieback. PLS‐DA and LDA were most accurate for classifying ITC species identifies (overall accuracy >90%), whereas RF was most accurate for classifying ash dieback severity (overall accuracy 77%). Dark pixel filtering further increased the accuracy of species classification (+6%), but not disease classification. The reflectances of narrow blue (415 nm), red‐edge (680 nm) and NIR (760 nm) bands had high CV across disease classes and should be included if multispectral imagery were to be used to monitor ash dieback. The study demonstrates the possibility of using remote sensing to forward epidemiological research by monitoring forest pathogens in landscape scales, which would allow temperate forest managers to control pathogen outbreaks, assess associated impacts and restore affected forests much more effectively. [ABSTRACT FROM AUTHOR]
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- 2021
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17. Riparian buffers act as microclimatic refugia in oil palm landscapes.
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Williamson, Joseph, Slade, Eleanor M., Luke, Sarah H., Swinfield, Tom, Chung, Arthur Y. C., Coomes, David A., Heroin, Herry, Jucker, Tommaso, Lewis, Owen T., Vairappan, Charles S., Rossiter, Stephen J., Struebig, Matthew J., and Louzada, Julio
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EFFECT of human beings on climate change ,OIL palm ,LANDSCAPES ,DUNG beetles ,WATER quality ,FOREST biodiversity - Abstract
There is growing interest in the ecological value of set‐aside habitats around rivers in tropical agriculture. These riparian buffers typically comprise forest or other non‐production habitat, and are established to maintain water quality and hydrological processes, while also supporting biodiversity, ecosystem function and landscape connectivity.We investigated the capacity for riparian buffers to act as microclimatic refugia by combining field‐based measurements of temperature, humidity and dung beetle communities with remotely sensed data from LiDAR across an oil palm dominated landscape in Borneo.Riparian buffers offer a cool and humid habitat relative to surrounding oil palm plantations, with wider buffers characterised by conditions comparable to riparian sites in continuous logged forest.High vegetation quality and topographic sheltering were strongly associated with cooler and more humid microclimates in riparian habitats across the landscape. Variance in beetle diversity was also predicted by both proximity‐to‐edge and microclimatic conditions within the buffer, suggesting that narrow buffers amplify the negative impacts that high temperatures have on biodiversity.Synthesis and applications. Widely legislated riparian buffer widths of 20–30 m each side of a river may provide drier and less humid microclimatic conditions than continuous forest. Adopting wider buffers and maintaining high vegetation quality will ensure set‐asides established for hydrological reasons bring co‐benefits for terrestrial biodiversity, both now, and in the face of anthropogenic climate change. [ABSTRACT FROM AUTHOR]
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- 2021
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18. Occurrence of blood‐feeding terrestrial leeches (Haemadipsidae) in a degraded forest ecosystem and their potential as ecological indicators.
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Drinkwater, Rosie, Williamson, Joseph, Swinfield, Tom, Deere, Nicolas J., Struebig, Matthew J., Clare, Elizabeth L., Coomes, David, and Rossiter, Stephen J.
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BIOINDICATORS ,FOREST degradation ,LEECHES ,TROPICAL forests ,DNA fingerprinting - Abstract
Copyright of Biotropica is the property of Wiley-Blackwell and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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- 2020
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19. Imaging spectroscopy reveals the effects of topography and logging on the leaf chemistry of tropical forest canopy trees.
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Swinfield, Tom, Both, Sabine, Riutta, Terhi, Bongalov, Boris, Elias, Dafydd, Majalap‐Lee, Noreen, Ostle, Nicholas, Svátek, Martin, Kvasnica, Jakub, Milodowski, David, Jucker, Tommaso, Ewers, Robert M., Zhang, Yi, Johnson, David, Teh, Yit Arn, Burslem, David F. R. P., Malhi, Yadvinder, and Coomes, David
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TROPICAL forests , *FOREST canopies , *SPECTRAL imaging , *TOPOGRAPHY , *CHEMISTRY , *DEAD trees , *AIRBORNE-based remote sensing - Abstract
Logging, pervasive across the lowland tropics, affects millions of hectares of forest, yet its influence on nutrient cycling remains poorly understood. One hypothesis is that logging influences phosphorus (P) cycling, because this scarce nutrient is removed in extracted timber and eroded soil, leading to shifts in ecosystem functioning and community composition. However, testing this is challenging because P varies within landscapes as a function of geology, topography and climate. Superimposed upon these trends are compositional changes in logged forests, with species with more acquisitive traits, characterized by higher foliar P concentrations, more dominant. It is difficult to resolve these patterns using traditional field approaches alone. Here, we use airborne light detection and ranging‐guided hyperspectral imagery to map foliar nutrient (i.e. P, nitrogen [N]) concentrations, calibrated using field measured traits, over 400 km2 of northeastern Borneo, including a landscape‐level disturbance gradient spanning old‐growth to repeatedly logged forests. The maps reveal that canopy foliar P and N concentrations decrease with elevation. These relationships were not identified using traditional field measurements of leaf and soil nutrients. After controlling for topography, canopy foliar nutrient concentrations were lower in logged forest than in old‐growth areas, reflecting decreased nutrient availability. However, foliar nutrient concentrations and specific leaf area were greatest in relatively short patches in logged areas, reflecting a shift in composition to pioneer species with acquisitive traits. N:P ratio increased in logged forest, suggesting reduced soil P availability through disturbance. Through the first landscape scale assessment of how functional leaf traits change in response to logging, we find that differences from old‐growth forest become more pronounced as logged forests increase in stature over time, suggesting exacerbated phosphorus limitation as forests recover. [ABSTRACT FROM AUTHOR]
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- 2020
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20. 3D Segmentation of Trees Through a Flexible Multiclass Graph Cut Algorithm.
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Williams, Jonathan, Schonlieb, Carola-Bibiane, Swinfield, Tom, Lee, Juheon, Cai, Xiaohao, Qie, Lan, and Coomes, David A.
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GRAPH algorithms ,OPTICAL radar ,LIDAR ,TREE mortality ,CONIFEROUS forests - Abstract
Developing a robust algorithm for automatic individual tree crown (ITC) detection from airborne laser scanning (ALS) data sets is important for tracking the responses of trees to anthropogenic change. Such approaches allow the size, growth, and mortality of individual trees to be measured, enabling forest carbon stocks and dynamics to be tracked and understood. Many algorithms exist for structurally simple forests, including coniferous forests and plantations. Finding a robust solution for structurally complex, species-rich tropical forests remains a challenge; existing segmentation algorithms often perform less well than simple area-based approaches when estimating plot-level biomass. Here, we describe a multiclass graph cut (MCGC) approach to tree crown delineation. This uses local 3D geometry and density information, alongside knowledge of crown allometries, to segment ITCs from airborne light detection and ranging point clouds. Our approach robustly identifies trees in the top and intermediate layers of the canopy, but cannot recognize small trees. From these 3D crowns, we are able to measure individual tree biomass. Comparing these estimates with those from permanent inventory plots, our algorithm can produce robust estimates of hectare-scale carbon density, demonstrating the power of ITC approaches in monitoring forests. The flexibility of our method to add additional dimensions of information, such as spectral reflectance, make this approach an obvious avenue for future development and extension to other sources of 3D data, such as structure from motion data sets. [ABSTRACT FROM AUTHOR]
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- 2020
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21. Credit credibility threatens forests.
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Balmford, Andrew, Brancalion, Pedro H. S., Coomes, David, Filewod, Ben, Groom, Ben, Guizar-Coutiño, Alejandro, Jones, Julia P. G., Keshav, Srinivasan, Kontoleon, Andreas, Madhavapeddy, Anil, Malhi, Yadvinder, Sills, Erin O., Strassburg, Bernardo B. N., Venmans, Frank, West, Thales A. P., Wheeler, Charlotte, and Swinfield, Tom
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- 2023
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22. Reconciling the contribution of environmental and stochastic structuring of tropical forest diversity through the lens of imaging spectroscopy.
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Bongalov, Boris, Burslem, David F. R. P., Jucker, Tommaso, Thompson, Samuel E. D., Rosindell, James, Swinfield, Tom, Nilus, Reuben, Clewley, Daniel, Phillips, Oliver L., Coomes, David A., and Comita, Liza
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SPECTRAL imaging ,TROPICAL forests ,FOREST biodiversity ,PLANT diversity ,STOCHASTIC processes ,AIRBORNE lasers - Abstract
Both niche and stochastic dispersal processes structure the extraordinary diversity of tropical plants, but determining their relative contributions has proven challenging. We address this question using airborne imaging spectroscopy to estimate canopy β‐diversity for an extensive region of a Bornean rainforest and challenge these data with models incorporating niches and dispersal. We show that remotely sensed and field‐derived estimates of pairwise dissimilarity in community composition are closely matched, proving the applicability of imaging spectroscopy to provide β‐diversity data for entire landscapes of over 1000 ha containing contrasting forest types. Our model reproduces the empirical data well and shows that the ecological processes maintaining tropical forest diversity are scale dependent. Patterns of β‐diversity are shaped by stochastic dispersal processes acting locally whilst environmental processes act over a wider range of scales. [ABSTRACT FROM AUTHOR]
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- 2019
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23. Restoration of tropical rain forest success improved by selecting species for specific microhabitats.
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Kardiman, Reki, Afriandi, Roki, Schmidt, Lars Holger, Ræbild, Anders, and Swinfield, Tom
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FOREST restoration ,ECOLOGICAL niche ,PLANTING ,FOREST degradation ,PLANT growth - Abstract
Highlights: • Experimental planting with 38 species over 8 ha degraded lowland Sumatran forest. • Survival was 41% two years after planting with mean growth of 32.5 cm y
−1 . • Survival and growth reduced in bamboo and increased in shrubs; growth increased in open areas. • Most species exhibited enhanced performance in specific habitats. • Planting in open areas with shrubs and species-site matching is recommended. Abstract The restoration of the Southeast Asian tropical forests is a global priority but is limited by a lack of experience and knowledge regarding tree species performance in the various micro-habitat conditions that are prevalent after disturbance. Here we study the survival, growth, susceptibility to damage and capacity to resprout of 38 Sumatran lowland tropical tree species in a restoration planting trial in several typical post-disturbance microhabitats. 3200 seedlings were planted in four two-hectare blocks in February 2013 at the Hutan Harapan Ecosystem Restoration concession in Sumatra, Indonesia, and subsequently censused every six-months for two years to assess performance and changes in microhabitat conditions. By the end of the experiment overall survival was only 41%, with damage incurred by 55% of the surviving plants. Habitat conditions (light/shade, presence/absence of bamboo and shrubs) and their interactions affected survival in complex ways. Bamboo negatively affected survival whereas shrubs had a positive effect, except where bamboo was also present. Height growth rate increased when sites were light-exposed. Individual species performances also differed across habitats. Defining a minimum threshold of 50% survival as a measure of success in different habitat types, only two species (A. pavonina and N. wallichiana) could be characterized as generalists. Eighteen other species were characterized as specialists with good performance in one-three habitat types. Our findings suggest that enhanced restoration success could be achieved through better species-site matching. [ABSTRACT FROM AUTHOR]- Published
- 2019
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24. Canopy structure and topography jointly constrain the microclimate of human‐modified tropical landscapes.
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Jucker, Tommaso, Hardwick, Stephen R., Both, Sabine, Elias, Dafydd M.O., Ewers, Robert M., Milodowski, David T., Swinfield, Tom, and Coomes, David A.
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FOREST canopies ,CLIMATE change ,VAPOUR pressure measurement ,FOREST degradation ,LIDAR ,REMOTE sensing ,EARTH temperature - Abstract
Local‐scale microclimatic conditions in forest understoreys play a key role in shaping the composition, diversity and function of these ecosystems. Consequently, understanding what drives variation in forest microclimate is critical to forecasting ecosystem responses to global change, particularly in the tropics where many species already operate close to their thermal limits and rapid land‐use transformation is profoundly altering local environments. Yet our ability to characterize forest microclimate at ecologically meaningful scales remains limited, as understorey conditions cannot be directly measured from outside the canopy. To address this challenge, we established a network of microclimate sensors across a land‐use intensity gradient spanning from old‐growth forests to oil‐palm plantations in Borneo. We then combined these observations with high‐resolution airborne laser scanning data to characterize how topography and canopy structure shape variation in microclimate both locally and across the landscape. In the processes, we generated high‐resolution microclimate surfaces spanning over 350 km2, which we used to explore the potential impacts of habitat degradation on forest regeneration under both current and future climate scenarios. We found that topography and vegetation structure were strong predictors of local microclimate, with elevation and terrain curvature primarily constraining daily mean temperatures and vapour pressure deficit (VPD), whereas canopy height had a clear dampening effect on microclimate extremes. This buffering effect was particularly pronounced on wind‐exposed slopes but tended to saturate once canopy height exceeded 20 m—suggesting that despite intensive logging, secondary forests remain largely thermally buffered. Nonetheless, at a landscape‐scale microclimate was highly heterogeneous, with maximum daily temperatures ranging between 24.2 and 37.2°C and VPD spanning two orders of magnitude. Based on this, we estimate that by the end of the century forest regeneration could be hampered in degraded secondary forests that characterize much of Borneo's lowlands if temperatures continue to rise following projected trends. Written Summary:Local‐scale microclimatic conditions in forest understoreys play a key role in shaping the composition, diversity and function of these ecosystems. Yet our ability to capture microclimate at scales relevant for management and conservation remains inherently limited. By combining a network of microclimate sensors with high‐resolution airborne laser scanning data acquired across a land‐use intensity gradient in Borneo, here we characterise how topography and canopy structure shape variation in microclimate in human‐modified tropical landscapes. We estimate that by 2080 forest regeneration could be hampered in large tracts of degraded secondary forest that make up much of Borneo's lowlands. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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25. Accelerating tropical forest restoration through the selective removal of pioneer species.
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Swinfield, Tom, Afriandi, Roki, Antoni, Ferry, and Harrison, Rhett D.
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TROPICAL forests ,FOREST restoration ,PLANT species ,BIODIVERSITY ,FOREST management ,LOGGING - Abstract
Demand for tropical forest restoration has grown rapidly as the potential role of recovering secondary forests in sequestering carbon and enhancing biodiversity has been recognised. Active forest management is often prescribed to accelerate natural regeneration, but evidence for the efficacy of interventions is scarce for tropical forests. In this study we examine the hypothesis that the selective removal of abundant pioneers in the understory of recovering selectively logged forests can improve the composition of forest stands and accelerate succession. Four selective thinning treatments of increasing intensity were implemented in 8.75 ha compartments and replicated six times. Within each compartment, three monitoring plots were established and measured immediately after thinning and one year later to assess implementation of thinning treatments, growth and survival of stems, and changes in stand composition. Canopy openness was measured using hemispherical photography. Thinning treatments substantially reduced the abundance of pioneers, but there was only a slight increase in canopy openness (3.7–4.3%) relative to the control (1.8%) 8 months after implementation. Canopy openness increased dramatically across all treatments in the follow year due to the 2015–16 El Niño event and increased more in thinning treatments. Large (>10 cm dbh) and small (2–10 cm dbh) late-successional stems showed enhanced growth only in the low intensity thinning treatment, whereas the growth of small pioneer stems increased across the thinning intensity gradient. The cost of implementing thinning treatments was $US80 per ha or approximately 10% of the cost of planting treatments in the same forest. Our findings suggest that selective thinning of understory pioneer stems is a practical option for manipulating stand composition and potentially accelerating natural regeneration. Continued monitoring of the experiment should reveal the long-term impact and cost-effectiveness of treatments. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
26. Restoration of logged humid tropical forests: An experimental programme at Harapan Rainforest, Indonesia.
- Author
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Harrison, Rhett D. and Swinfield, Tom
- Abstract
Restoration of degraded tropical forests can enhance ecosystem service provisioning, improve habitat quality for tropical forest biota and generate income from timber and NTFPs. In Indonesia alone, an estimated 25 million ha of former logging concessions are without current management, representing a huge opportunity for biodiversity conservation. However, currently such forests are typically converted to plantations. Realising the restoration potential of these forests will require viable business models that couple restoration goals with income generation. Unfortunately, understanding of natural succession trajectories and cost-effectiveness of restoration interventions remains poor. We present an overview of research, including three planned experiments designed to test the economic viability of large-scale restoration treatments, in a former logging concession at Harapan Rainforest (98,455 ha), Indonesia. These experiments will address the following questions: (1) Can the selective removal of pioneer trees, including an invasive species, be used to accelerate succession; (2) how does the functional diversity of the planted matrix affect growth and survival of a high value target species; and (3) how does seed density affect recruitment success in direct seeding treatments? Treatments will be applied to large compartments (4~8 ha) to reduce edge effects and simplify management. Monitoring plots (20 x 20 m x 5 reps) within each compartment will be used to assess silvicultural responses, while changes in biodiversity and carbon storage will be monitored at the compartment level. The large spatial scale and high replication of the treatments will establish an experimental platform that will inform many different aspects of tropical forest ecology. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
27. Restoration of artificial ponds in logging concessions: a case-study from Harapan Rainforest, Sumatra.
- Author
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Schmidt, Lars, Prasetyonohadi, Djoko, and Swinfield, Tom
- Abstract
Artificial ponds and swamps commonly occur throughout logged forests of Southeast Asia in association with roads. Dammed streams accumulate water, which floods the surrounding forest creating ponds and swamps, which are slow to recover to a condition that maximises their conservation value. In particular, ponds remain relatively anoxic and the self-recovery of swamps is slow due to delayed colonisation by swamp tolerant species. The Harapan Rainforest ecosystem restoration concession in Sumatra is a clear example of this issue. Within the 100,000 ha of lowland rain forest, four watersheds are present with more than 750 km of rivers and their tributaries. Across this area more than 175 artificial ponds and swamps have been created through the construction of the road network over the past 30- 40 years. Despite the artificial nature of their creation there is a significant conservation value in improving the alluvial swamps due to the significant decline in extent of this habitat across Southeast Asia. However, tropical forest streams too have been widely degraded and are a conservation priority due to the uniqueness of their associated biodiversity. As such, we propose the restoration of these habitats through the drainage of ponds to improve stream flow and connectivity and the establishment of swamp specialist tree species. An approach for identifying sites suitable for restoration is presented focusing on making comparisons with 'model' streams and swamps. Restoration techniques are proposed, including a list of swamp species suitable for planting trials at swamp sites and techniques for the suppression of disturbance responsive species, such as bamboos, ferns and lianas. We stress that pond restoration activities in general should always include unmanaged control ponds to enable the measurement of the additional benefit of restoration activities beyond that of natural recovery. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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- View/download PDF
28. Testing the Janzen-Connell mechanism: pathogens cause overcompensating density dependence in a tropical tree.
- Author
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Bagchi, Robert, Swinfield, Tom, Gallery, Rachel E., Lewis, Owen T., Gripenberg, Sofia, Narayan, Lakshmi, and Freckleton, Robert P.
- Subjects
- *
PATHOGENIC microorganisms , *ENVIRONMENTAL sciences , *BIODIVERSITY , *MEDICAL microbiology , *BACTERIOPHAGES - Abstract
Ecology Letters (2010) The Janzen-Connell hypothesis is a leading explanation for plant-species diversity in tropical forests. It suggests that specialized natural enemies decrease offspring survival at high densities beneath parents, giving locally rarer species an advantage. This mechanism, in its original form, assumes that density dependence is overcompensating: mortality must be disproportionately high at the highest densities, with few offspring recruiting below their parents. We tested this assumption using parallel shadehouse and field density-series experiments on seedlings of a tropical tree, Pleradenophora longicuspis. We found strong, overcompensating mortality driven by fungal pathogens, causing 90% (shadehouse) or 100% (field) mortality within 4 weeks of germination, and generating a negative relationship between initial and final seedling densities. Fungicide treatment led to much lower, density-independent, mortality. Overcompensating mortality was extremely rapid, and could be missed without detailed monitoring. Such dynamics may prevent dead trees from being replaced by conspecifics, promoting coexistence as envisioned by the Janzen-Connell hypothesis. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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29. Accurate Measurement of Tropical Forest Canopy Heights and Aboveground Carbon Using Structure From Motion.
- Author
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Swinfield, Tom, Lindsell, Jeremy A., Williams, Jonathan V., Harrison, Rhett D., Agustiono, Habibi, Gemita, Elva, Schönlieb, Carola B., and Coomes, David A.
- Subjects
- *
DRONE aircraft , *LIDAR , *FOREST canopies , *FOREST management , *CARBON - Abstract
Unmanned aerial vehicles are increasingly used to monitor forests. Three-dimensional models of tropical rainforest canopies can be constructed from overlapping photos using Structure from Motion (SfM), but it is often impossible to map the ground elevation directly from such data because canopy gaps are rare in rainforests. Without knowledge of the terrain elevation, it is, thus, difficult to accurately measure the canopy height or forest properties, including the recovery stage and aboveground carbon density. Working in an Indonesian ecosystem restoration landscape, we assessed how well SfM derived the estimates of the canopy height and aboveground carbon density compared with those from an airborne laser scanning (also known as LiDAR) benchmark. SfM systematically underestimated the canopy height with a mean bias of approximately 5 m. The linear models suggested that the bias increased quadratically with the top-of-canopy height for short, even-aged, stands but linearly for tall, structurally complex canopies (>10 m). The predictions based on the simple linear model were closely correlated to the field-measured heights when the approach was applied to an independent survey in a different location ( R 2 = 67% and RMSE = 1.85 m), but a negative bias of 0.89 m remained, suggesting the need to refine the model parameters with additional training data. Models that included the metrics of canopy complexity were less biased but with a reduced R 2 . The inclusion of ground control points (GCPs) was found to be important in accurately registering SfM measurements in space, which is essential if the survey requirement is to produce small-scale restoration interventions or to track changes through time. However, at the scale of several hectares, the top-of-canopy height and above-ground carbon density estimates from SfM and LiDAR were very similar even without GCPs. The ability to produce accurate top-of-canopy height and carbon stock measurements from SfM is game changing for forest managers and restoration practitioners, providing the means to make rapid, low-cost surveys over hundreds of hectares without the need for LiDAR. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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30. The road to recovery: a synthesis of outcomes from ecosystem restoration in tropical and sub-tropical Asian forests.
- Author
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Banin LF, Raine EH, Rowland LM, Chazdon RL, Smith SW, Rahman NEB, Butler A, Philipson C, Applegate GG, Axelsson EP, Budiharta S, Chua SC, Cutler MEJ, Elliott S, Gemita E, Godoong E, Graham LLB, Hayward RM, Hector A, Ilstedt U, Jensen J, Kasinathan S, Kettle CJ, Lussetti D, Manohan B, Maycock C, Ngo KM, O'Brien MJ, Osuri AM, Reynolds G, Sauwai Y, Scheu S, Silalahi M, Slade EM, Swinfield T, Wardle DA, Wheeler C, Yeong KL, and Burslem DFRP
- Subjects
- Biodiversity, Plants, Asia, Ecosystem, Tropical Climate
- Abstract
Current policy is driving renewed impetus to restore forests to return ecological function, protect species, sequester carbon and secure livelihoods. Here we assess the contribution of tree planting to ecosystem restoration in tropical and sub-tropical Asia; we synthesize evidence on mortality and growth of planted trees at 176 sites and assess structural and biodiversity recovery of co-located actively restored and naturally regenerating forest plots. Mean mortality of planted trees was 18% 1 year after planting, increasing to 44% after 5 years. Mortality varied strongly by site and was typically ca 20% higher in open areas than degraded forest, with height at planting positively affecting survival. Size-standardized growth rates were negatively related to species-level wood density in degraded forest and plantations enrichment settings. Based on community-level data from 11 landscapes, active restoration resulted in faster accumulation of tree basal area and structural properties were closer to old-growth reference sites, relative to natural regeneration, but tree species richness did not differ. High variability in outcomes across sites indicates that planting for restoration is potentially rewarding but risky and context-dependent. Restoration projects must prepare for and manage commonly occurring challenges and align with efforts to protect and reconnect remaining forest areas. The abstract of this article is available in Bahasa Indonesia in the electronic supplementary material. This article is part of the theme issue 'Understanding forest landscape restoration: reinforcing scientific foundations for the UN Decade on Ecosystem Restoration'.
- Published
- 2023
- Full Text
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31. Consequences of changing rainfall for fungal pathogen-induced mortality in tropical tree seedlings.
- Author
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Swinfield T, Lewis OT, Bagchi R, and Freckleton RP
- Abstract
Most general circulation models predict that most tropical forests will experience lower and less frequent rainfall in future as a result of climate change, which may reduce the capacity of fungal pathogens to drive density-dependent tree mortality. This is potentially significant because fungal pathogens are thought to play a key role in promoting and structuring plant diversity in tropical forests through the Janzen-Connell mechanism. Therefore, we hypothesize that the drying of tropical forests will negatively impact species coexistence. To test one prediction of this hypothesis, we imposed experimental watering regimes on the seedlings of a tropical tree, Pleradenophora longicuspis, and measured mortality induced by fungal pathogens under shade house conditions. The frequency of watering had a strong impact on survival. Seedlings watered daily experienced significantly higher mortality than those watered every three or every six days, while increasing the volume of water applied also led to increased mortality, although this relationship was less pronounced. These results suggest that the capacity of fungal pathogens to drive density-dependent mortality may be reduced in drier climates and when rainfall is less frequent, with potential implications for the diversity enhancing Janzen-Connell mechanism.
- Published
- 2012
- Full Text
- View/download PDF
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