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The widespread salinisation of freshwater ecosystems poses a major threat to the biodiversity, functioning, and services that they provide. Human activities promote freshwater salinisation through multiple drivers (e.g., agriculture, resource extraction, urbanisation) that are amplified by climate change. Due to its complexity, we are still far from fully understanding the ecological and evolutionary consequences of freshwater salinisation. Here, we assess current research gaps and present a research agenda to guide future studies. We identified different gaps in taxonomic groups, levels of biological organisation, and geographic regions. We suggest focusing on global- and landscape-scale processes, functional approaches, genetic and molecular levels, and ecoevolutionary dynamics as key future avenues to predict the consequences of freshwater salinisation for ecosystems and human societies.

The widespread salinisation of freshwater ecosystems poses a major threat to the biodiversity, functioning, and services that they provide. Human activities promote freshwater salinisation through multiple drivers (e.g., agriculture, resource extraction, urbanisation) that are amplified by climate change. Due to its complexity, we are still far from fully understanding the ecological and evolutionary consequences of freshwater salinisation. Here, we assess current research gaps and present a research agenda to guide future studies. We identified different gaps in taxonomic groups, levels of biological organisation, and geographic regions. We suggest focusing on global- and landscape-scale processes, functional approaches, genetic and molecular levels, and ecoevolutionary dynamics as key future avenues to predict the consequences of freshwater salinisation for ecosystems and human societies.

The widespread salinisation of freshwater ecosystems poses a major threat to the biodiversity, functioning, and services that they provide. Human activities promote freshwater salinisation through multiple drivers (e.g., agriculture, resource extraction, urbanisation) that are amplified by climate change. Due to its complexity, we are still far from fully understanding the ecological and evolutionary consequences of freshwater salinisation. Here, we assess current research gaps and present a research agenda to guide future studies. We identified different gaps in taxonomic groups, levels of biological organisation, and geographic regions. We suggest focusing on global- and landscape-scale processes, functional approaches, genetic and molecular levels, and ecoevolutionary dynamics as key future avenues to predict the consequences of freshwater salinisation for ecosystems and human societies.

An organism's body size plays an important role in ecological interactions such as predator–prey relationships. As predators are typically larger than their prey, this often leads to a strong positive relationship between body size and trophic position in aquatic ecosystems. The distribution of body sizes in a community can thus be an indicator of the strengths of predator–prey interactions. The aim of this study was to gain more insight into the relationship between fish body size distribution and trophic position in a wide range of European lakes. We used quantile regression to examine the relationship between fish species' trophic position and their log-transformed maximum body mass for 48 fish species found in 235 European lakes. Subsequently, we examined whether the slopes of the continuous community size distributions, estimated by maximum likelihood, were predicted by trophic position, predator–prey mass ratio (PPMR), or abundance (number per unit effort) of fish communities in these lakes. We found a positive linear relationship between species' maximum body mass and average trophic position in fishes only for the 75% quantile, contrasting our expectation that species' trophic position systematically increases with maximum body mass for fish species in European lakes. Consequently, the size spectrum slope was not related to the average community trophic position, but there were negative effects of community PPMR and total fish abundance on the size spectrum slope. We conclude that predator–prey interactions likely do not contribute strongly to shaping community size distributions in these lakes.

Body size is a fundamental attribute of organisms because many physiological rates are size-dependent. Body size also determines ecological structures and processes including population abundance, predator-prey interactions and the resilience capacity of the food webs. Thus, the natural variations in community size structure can potentially have profound effects on ecosystem functioning. Most of the empirical studies about the size structure of aquatic communities have focused on marine ecosystems, but more recently on lentic ecosystems. Studies about the community size structure in rivers are scarce and mainly focus on simple size- related variables such as the mean or maximum length of organisms. Thus, there is still great potential to test the use of other size-related variables (i.e., size spectra, size diversity) as ecological indicators of river fish communities. The abundance size spectrum describes the log-log relationship between body size and abundance, typically with abundance summed within size bins of geometric series of two. The size diversity integrates the amplitude of the size range and the evenness across size in the same way as the Shannon species diversity integrates the number of species and their relative abundance. We have recently conducted several projects to test the main drivers shaping these size-related variables on fish communities in rivers and streams. In the Andes (Peru and Colombia) we identified systematic changes of the fish size structure along the altitudinal gradient on streams with pristine conditions. In subtropical streams (Uruguay) we detected that fish size community structure changed along a gradient of land uses, from more anthropogenic disturbed basins (i.e., the dominance of urban and agricultural land use) to more pristine stream basins (i.e., the dominance of rangelands). In Mediterranean streams (Spain) we also showed that the size structure of fish community consistently responded to the local water conditions and

We provide a unique fish individual body size dataset collected from our own sampling and public sources in north-eastern Spain. The dataset includes individual body size measures (fork length and mass) of 12,288 individuals of 24 fish species within 10 families collected at 118 locations in large rivers and small streams. Fish were caught by one-pass electrofishing following European standard protocols. The fish dataset has information on the local instream conditions including climatic variables (i.e., temperature and precipitation), topography (i.e., altitude), nutrient concentration (i.e., total phosphorus and nitrates), and the IMPRESS values (a measure of cumulative human impacts in lotic ecosystems). The potential uses of this new fish dataset are manifold, including developing size-based indices to further estimate the ecological status of freshwater ecosystems, allometric models, and analysis of variation in body size structure along environmental gradients

The widespread salinisation of freshwater ecosystems poses a major threat to the biodiversity, functioning, and services that they provide. Human activities promote freshwater salinisation through multiple drivers (e.g., agriculture, resource extraction, urbanisation) that are amplified by climate change. Due to its complexity, we are still far from fully understanding the ecological and evolutionary consequences of freshwater salinisation. Here, we assess current research gaps and present a research agenda to guide future studies. We identified different gaps in taxonomic groups, levels of biological organisation, and geographic regions. We suggest focusing on global- and landscape-scale processes, functional approaches, genetic and molecular levels, and ecoevolutionary dynamics as key future avenues to predict the consequences of freshwater salinisation for ecosystems and human societies.

The widespread salinisation of freshwater ecosystems poses a major threat to the biodiversity, functioning, and services that they provide. Human activities promote freshwater salinisation through multiple drivers (e.g., agriculture, resource extraction, urbanisation) that are amplified by climate change. Due to its complexity, we are still far from fully understanding the ecological and evolutionary consequences of freshwater salinisation. Here, we assess current research gaps and present a research agenda to guide future studies. We identified different gaps in taxonomic groups, levels of biological organisation, and geographic regions. We suggest focusing on global- and landscape-scale processes, functional approaches, genetic and molecular levels, and ecoevolutionary dynamics as key future avenues to predict the consequences of freshwater salinisation for ecosystems and human societies.

The widespread salinisation of freshwater ecosystems poses a major threat to the biodiversity, functioning, and services that they provide. Human activities promote freshwater salinisation through multiple drivers (e.g., agriculture, resource extraction, urbanisation) that are amplified by climate change. Due to its complexity, we are still far from fully understanding the ecological and evolutionary consequences of freshwater salinisation. Here, we assess current research gaps and present a research agenda to guide future studies. We identified different gaps in taxonomic groups, levels of biological organisation, and geographic regions. We suggest focusing on global- and landscape-scale processes, functional approaches, genetic and molecular levels, and ecoevolutionary dynamics as key future avenues to predict the consequences of freshwater salinisation for ecosystems and human societies.

Aim: We tested whether there is a strong effect of species interactions on assembly of local lake fish communities, in addition to environmental filters and dispersal. Location: Seven hundred and seventy-two European lakes and reservoirs. Time period: 1993–2012. Major taxa studied: Nineteen species of freshwater fishes. Methods: We applied a latent variable approach using Bayesian Markov chain Monte Carlo algorithms (R package “BORAL”). We compared the contributions of six environmental predictors and the spatial organization of 772 European lakes in 209 river basins on the presence/absence of the 19 most frequent fish species and on the biomass and mean mass of the six dominant species. We inspected the residual correlation matrix for positive and negative correlations between species. Results: Environmental (50%) and spatial (10%) predictors contributed to the presence/absence assembly of lake fish communities, whereas lake size and productivity contributed strongly to the biomass and mean mass structures. We found highly significant negative correlations between predator and prey fish species pairs in the presence/absence, biomass and mean mass datasets. There were more significantly positive than negative correlations between species pairs in all three datasets. In addition, unmeasured abiotic predictors might explain some of the correlations between species. Main conclusions: Strong effects of species interactions on assembly of lake fish communities are very likely. We admit that our approach is of a correlational nature and does not generate mechanistic evidence that interactions strongly shape fish community structures; however, the results fit with present knowledge about the interactions between the most frequent fish species in European lakes and they support the assumption that, in particular, the mean masses of fish species in lakes are modified by species interactions.

Aim: We tested whether there is a strong effect of species interactions on assembly of local lake fish communities, in addition to environmental filters and dispersal. Location: Seven hundred and seventy-two European lakes and reservoirs. Time period: 1993–2012. Major taxa studied: Nineteen species of freshwater fishes. Methods: We applied a latent variable approach using Bayesian Markov chain Monte Carlo algorithms (R package “BORAL”). We compared the contributions of six environmental predictors and the spatial organization of 772 European lakes in 209 river basins on the presence/absence of the 19 most frequent fish species and on the biomass and mean mass of the six dominant species. We inspected the residual correlation matrix for positive and negative correlations between species. Results: Environmental (50%) and spatial (10%) predictors contributed to the presence/absence assembly of lake fish communities, whereas lake size and productivity contributed strongly to the biomass and mean mass structures. We found highly significant negative correlations between predator and prey fish species pairs in the presence/absence, biomass and mean mass datasets. There were more significantly positive than negative correlations between species pairs in all three datasets. In addition, unmeasured abiotic predictors might explain some of the correlations between species. Main conclusions: Strong effects of species interactions on assembly of lake fish communities are very likely. We admit that our approach is of a correlational nature and does not generate mechanistic evidence that interactions strongly shape fish community structures; however, the results fit with present knowledge about the interactions between the most frequent fish species in European lakes and they support the assumption that, in particular, the mean masses of fish species in lakes are modified by species interactions.

Aim: We tested whether there is a strong effect of species interactions on assembly of local lake fish communities, in addition to environmental filters and dispersal. Location: Seven hundred and seventy-two European lakes and reservoirs. Time period: 1993–2012. Major taxa studied: Nineteen species of freshwater fishes. Methods: We applied a latent variable approach using Bayesian Markov chain Monte Carlo algorithms (R package “BORAL”). We compared the contributions of six environmental predictors and the spatial organization of 772 European lakes in 209 river basins on the presence/absence of the 19 most frequent fish species and on the biomass and mean mass of the six dominant species. We inspected the residual correlation matrix for positive and negative correlations between species. Results: Environmental (50%) and spatial (10%) predictors contributed to the presence/absence assembly of lake fish communities, whereas lake size and productivity contributed strongly to the biomass and mean mass structures. We found highly significant negative correlations between predator and prey fish species pairs in the presence/absence, biomass and mean mass datasets. There were more significantly positive than negative correlations between species pairs in all three datasets. In addition, unmeasured abiotic predictors might explain some of the correlations between species. Main conclusions: Strong effects of species interactions on assembly of lake fish communities are very likely. We admit that our approach is of a correlational nature and does not generate mechanistic evidence that interactions strongly shape fish community structures; however, the results fit with present knowledge about the interactions between the most frequent fish species in European lakes and they support the assumption that, in particular, the mean masses of fish species in lakes are modified by species interactions.

Aquatic ecosystems are strongly body-size structured with a decline of numerical abundance with increasing body size (hereafter, the size spectrum). Marine and lake fish studies have reported consistent variations of size spectra in relation to environmental conditions and biotic composition, but little is known about stream fishes. Accordingly, in this study we test several hypotheses about the effects of local water conditions, biotic introductions and cumulative pressures (measured as the IMPRESS index) on the fish size-spectrum slope (that is, the linear rate of decline of fish abundance as body size increase in a log-log scale) and the size-spectrum intercept (commonly used as proxy for carrying capacity) among 118 local fish assemblages in streams of the NE Iberian Peninsula. To our knowledge, this is the first time that an extensive river fish dataset is used in a dendritic network to cover systematic changes of size-spectrum parameters. We find that the slope and intercept of the fish size spectrum are negatively correlated with nutrient concentration (mainly total phosphorus), with a greater relative abundance of small fishes but a decline of overall carrying capacity. Moreover, fish assemblages with greater relative abundance of non-native species have flatter size-spectrum slopes. In contrast, the IMPRESS index and climate-related variables are poor predictors of the shape of the fish size spectra. This study contributes to better understanding of the main factors structuring fish assemblages in lotic environments of the Iberian Peninsula. We encourage more research on this line to further explore the use of fish size structure to evaluate the ecological health of riverine ecosystems

Fish community feeding and production rates may differ between lakes despite similar fish biomass levels because of differences in size structure and local temperature. Therefore, across‐lake comparisons of the strength and direction of top‐down and bottom‐up fish–phytoplankton relationships should consider these factors. We used the metabolic theory of ecology to calculate size‐ and temperature‐corrected community energy demand (CEDom) and community production (CP) of omnivorous fishes in 227 European lakes from major habitat types (MHTs) of polar freshwaters, temperate floodplain rivers and wetlands, and temperate coastal rivers. We related CEDom with total phosphorus (TP)‐corrected chlorophyll a (Chl a) concentrations to evaluate a potential top‐down directed trophic cascade from fish to phytoplankton. Furthermore, we related Chl a with CP to demonstrate potential bottom‐up effects of phytoplankton on fish. For both analyses, we added the CED of piscivorous fishes (CEDpi) as a predictor to account for potential predation effects on the omnivorous fish community. CEDom was weakly positively related with TP‐corrected Chl a, but the strength of the relationship differed between MHTs. In contrast, CP was consistently positively related with Chl a in the entire dataset. CEDpi did not contribute to top‐down or bottom‐up relationships. The application of metabolic variables characterizing fish community feeding and production rates makes these results robust because the approach accounted for the usually neglected effects of fish size and temperature in across‐lake comparisons. Our results suggest that bottom‐up effects from phytoplankton on fish secondary production in lakes are substantially stronger than top‐down effects from fish on phytoplankton biomass.

Fish community feeding and production rates may differ between lakes despite similar fish biomass levels because of differences in size structure and local temperature. Therefore, across‐lake comparisons of the strength and direction of top‐down and bottom‐up fish–phytoplankton relationships should consider these factors. We used the metabolic theory of ecology to calculate size‐ and temperature‐corrected community energy demand (CEDom) and community production (CP) of omnivorous fishes in 227 European lakes from major habitat types (MHTs) of polar freshwaters, temperate floodplain rivers and wetlands, and temperate coastal rivers. We related CEDom with total phosphorus (TP)‐corrected chlorophyll a (Chl a) concentrations to evaluate a potential top‐down directed trophic cascade from fish to phytoplankton. Furthermore, we related Chl a with CP to demonstrate potential bottom‐up effects of phytoplankton on fish. For both analyses, we added the CED of piscivorous fishes (CEDpi) as a predictor to account for potential predation effects on the omnivorous fish community. CEDom was weakly positively related with TP‐corrected Chl a, but the strength of the relationship differed between MHTs. In contrast, CP was consistently positively related with Chl a in the entire dataset. CEDpi did not contribute to top‐down or bottom‐up relationships. The application of metabolic variables characterizing fish community feeding and production rates makes these results robust because the approach accounted for the usually neglected effects of fish size and temperature in across‐lake comparisons. Our results suggest that bottom‐up effects from phytoplankton on fish secondary production in lakes are substantially stronger than top‐down effects from fish on phytoplankton biomass.

The density of organisms declines with size, because larger organisms need more energy than smaller ones and energetic losses occur when larger organisms feed on smaller ones. A potential expression of density-size distributions are Normalized Biomass Size Spectra (NBSS), which plot the logarithm of biomass independent of taxonomy within bins of logarithmic organismal size, divided by the bin width. Theoretically, the NBSS slope of multi-trophic communities is exactly - 1.0 if the trophic transfer efficiency (TTE, ratio of production rates between adjacent trophic levels) is 10% and the predator-prey mass ratio (PPMR) is fixed at 10(4). Here we provide evidence from four multi-trophic lake food webs that empirically estimated TTEs correspond to empirically estimated slopes of the respective community NBSS. Each of the NBSS considered pelagic and benthic organisms spanning size ranges from bacteria to fish, all sampled over three seasons in 1 yr. The four NBSS slopes were significantly steeper than -1.0 (range -1.14 to -1.19, with 95% CIs excluding -1). The corresponding average TTEs were substantially lower than 10% in each of the four food webs (range 1.0% to 3.6%, mean 1.85%). The overall slope merging all biomass-size data pairs from the four systems (-1.17) was almost identical to the slope predicted from the arithmetic mean TTE of the four food webs (-1.18) assuming a constant PPMR of 10(4). Accordingly, our empirical data confirm the theoretically predicted quantitative relationship between TTE and the slope of the biomass-size distribution. Furthermore, we show that benthic and pelagic organisms can be merged into a community NBSS, but future studies have yet to explore potential differences in habitat-specific TTEs and PPMRs. We suggest that community NBSS may provide valuable information on the structure of food webs and their energetic pathways, and can result in improved accuracy of TTE-estimates.

Invasion of non-native species is considered a major threat to global biodiversity. Here we present a comprehensive overview of the occurrence, richness and biomass contribution of non-native fish species in 1943 standing water bodies from 14 countries of the Western Palearctic, based on standardised fish catches by multi-mesh gillnetting. We expected strong geographical gradients to emerge in the occurrence of non-natives. We further hypothesised that the contribution by non-natives to the local fish community biomass was correlated with local richness and the trophic level of native and non-native species. Non-native fish species occurred in 304 of 1943 water bodies (16%). If the average number of occupied water bodies per country was weighted by number of water bodies per country, the grand mean occurrence of non-natives in Western Palearctic water bodies was 10%. Exotic (non-native to the Palearctic) and translocated (non-native only to parts of the Palearctic) species were found in 164 (8.4%) or 235 (12.1%) of the water bodies, respectively. The occurrence and local richness of non-native fish species increased with temperature, precipitation and lake area and were substantially higher in reservoirs than in natural lakes. High local biomass contributions of non-native species were strongly correlated with low richness of native species and high richness of non-native species, whereas the trophic level of the fish species had only a weak effect. Single non-native species rarely dominated community biomass, but high biomass contributions and thus strong community and ecosystem impacts can be expected if several non-native species accumulate in a water body.

Body size, coupled with abundance and taxonomy, may help to understand the mechanisms shaping community structure. Since the body size of fish is closely related to their trophic niche, size diversity (based on individual body size) of fish communities may capture intraspecific variations in fish trophic niches that are not detected by species diversity. Thus, the relationship between size diversity and species diversity may help to integrate variation at both intraspecific and interspecific levels. We studied the relationship between species diversity and size diversity as a measure of the degree of overlap in size among species and thereby the potential overlap in niches in a community. We hypothesized that the relationship between size diversity and species would be different across the European continent due to different levels of size overlap in fish communities. The data were derived from samplings of fish communities using standardised benthic gill nets in 363 lakes. At the continental scale, size diversity increased with species diversity; at the ecoregion scale, the slope of the relation changed across the continent, with the greatest mismatch occurring in northern Europe where communities comprised only one or a few species, but each of which exhibited a great range in size. There was an increase in slope towards the south with significant relations for four out of six ecoregions. The steeper size diversity-species diversity slope at lower latitudes is attributable to a lower overlap in fish size and thus likely to finer niche separation. Our results also suggest that size diversity is not a strong surrogate for species diversity in European lake fish communities. Thus, particularly in fish communities composed of few species, measuring size diversity may help to detect potential functional variation which may be neglected by measuring species diversity alone.

Invasion of non-native species is considered a major threat to global biodiversity. Here we present a comprehensive overview of the occurrence, richness and biomass contribution of non-native fish species in 1943 standing water bodies from 14 countries of the Western Palearctic, based on standardised fish catches by multi-mesh gillnetting. We expected strong geographical gradients to emerge in the occurrence of non-natives. We further hypothesised that the contribution by non-natives to the local fish community biomass was correlated with local richness and the trophic level of native and non-native species. Non-native fish species occurred in 304 of 1943 water bodies (16%). If the average number of occupied water bodies per country was weighted by number of water bodies per country, the grand mean occurrence of non-natives in Western Palearctic water bodies was 10%. Exotic (non-native to the Palearctic) and translocated (non-native only to parts of the Palearctic) species were found in 164 (8.4%) or 235 (12.1%) of the water bodies, respectively. The occurrence and local richness of non-native fish species increased with temperature, precipitation and lake area and were substantially higher in reservoirs than in natural lakes. High local biomass contributions of non-native species were strongly correlated with low richness of native species and high richness of non-native species, whereas the trophic level of the fish species had only a weak effect. Single non-native species rarely dominated community biomass, but high biomass contributions and thus strong community and ecosystem impacts can be expected if several non-native species accumulate in a water body.

Body size, coupled with abundance and taxonomy, may help to understand the mechanisms shaping community structure. Since the body size of fish is closely related to their trophic niche, size diversity (based on individual body size) of fish communities may capture intraspecific variations in fish trophic niches that are not detected by species diversity. Thus, the relationship between size diversity and species diversity may help to integrate variation at both intraspecific and interspecific levels. We studied the relationship between species diversity and size diversity as a measure of the degree of overlap in size among species and thereby the potential overlap in niches in a community. We hypothesized that the relationship between size diversity and species would be different across the European continent due to different levels of size overlap in fish communities. The data were derived from samplings of fish communities using standardised benthic gill nets in 363 lakes. At the continental scale, size diversity increased with species diversity; at the ecoregion scale, the slope of the relation changed across the continent, with the greatest mismatch occurring in northern Europe where communities comprised only one or a few species, but each of which exhibited a great range in size. There was an increase in slope towards the south with significant relations for four out of six ecoregions. The steeper size diversity-species diversity slope at lower latitudes is attributable to a lower overlap in fish size and thus likely to finer niche separation. Our results also suggest that size diversity is not a strong surrogate for species diversity in European lake fish communities. Thus, particularly in fish communities composed of few species, measuring size diversity may help to detect potential functional variation which may be neglected by measuring species diversity alone.

Here we provide the metadata for an overview on fish species presence/absence in 1943 Palearctic (Europe + Turkey) lakes and reservoirs. The data have been obtained by standardized multi-mesh gillnet fishing, primarily to fulfill the requirements of the European Water Framework Directive (WFD). The species list encompasses about 100 species, a few of them split into subspecies. The database has been accumulated for the purpose of intercalibration of the evaluation systems for the WFD, and has systematically been used for research in the EU project WISER.

Here we provide the metadata for an overview on fish species presence/absence in 1943 Palearctic (Europe + Turkey) lakes and reservoirs. The data have been obtained by standardized multi-mesh gillnet fishing, primarily to fulfill the requirements of the European Water Framework Directive (WFD). The species list encompasses about 100 species, a few of them split into subspecies. The database has been accumulated for the purpose of intercalibration of the evaluation systems for the WFD, and has systematically been used for research in the EU project WISER.

We studied fish size structure by using mean size, size diversity, and the slope of linear size spectra of six common European fish species along large-scale environmental gradients. We further analyzed the response of these three size metrics to environmental variables and to density-dependent effects, i.e., relative estimates of abundance (catch per unit effort, CPUE). We found differences in the strength of main predictors of size structure between the six species, but the direction of the response was relatively similar and consistent for most of the size metrics. Mean body size was negatively related to temperature for perch (Perca fluviatilis), roach (Rutilus rutilus), and ruffe (Gymnocephalus cernuus). Lake productivity (expressed as total phosphorus concentration) and lake depth were also predictors of size structure for four of six species. Moreover, we found a strong density dependence of size structure for all species, resulting in lower mean body size and size diversity and steeper size spectra slopes when density dependence increases. This suggests that density dependence is a key driver of fish size structure.

Planktivorous and benthivorous fish have been documented to influence the density and size structure of their prey communities in lakes. We hypothesized that piscivorous fish modify their prey fish communities in the same way and sought to find evidence for such predation effects from a comparison across 356 lakes located in nine European ecoregions. We categorized individual fish as being either piscivore, non-piscivore or prey of piscivores, depending on species and individual size. We calculated piscivore, non-piscivore and piscivore prey densities, respectively, and fit linear abundance size spectra (SS) on lake-specific piscivore, non-piscivore and piscivore prey size distributions. Multiple linear regressions were calculated to quantify the effect of piscivore density and SS slopes on non-piscivore and piscivore prey densities and SS slopes, by accounting for potentially confounding factors arising from lake morphometry, productivity and local air temperature. Piscivore density correlated positively with piscivore prey density, but was uncorrelated to density of non-piscivores. Across a subset of 76 lakes for which SS slopes of piscivores were statistically significant, SS slopes of piscivores were uncorrelated with SS slopes of either non-piscivores or piscivore prey. However, densities of piscivores, non-piscivores or piscivore prey were a significant negative predictor of SS slopes of the respective groups. Our analyses suggest that direct predation effects by piscivorous fish on density and size structure of prey fish communities are weak in European lakes, likely caused by low predator-prey size ratios and the resulting size refuges for prey fish. In contrast, competition may substantially contribute to between-lake variability in fish density and size.

We studied fish size structure by using mean size, size diversity, and the slope of linear size spectra of six common European fish species along large-scale environmental gradients. We further analyzed the response of these three size metrics to environmental variables and to density-dependent effects, i.e., relative estimates of abundance (catch per unit effort, CPUE). We found differences in the strength of main predictors of size structure between the six species, but the direction of the response was relatively similar and consistent for most of the size metrics. Mean body size was negatively related to temperature for perch (Perca fluviatilis), roach (Rutilus rutilus), and ruffe (Gymnocephalus cernuus). Lake productivity (expressed as total phosphorus concentration) and lake depth were also predictors of size structure for four of six species. Moreover, we found a strong density dependence of size structure for all species, resulting in lower mean body size and size diversity and steeper size spectra slopes when density dependence increases. This suggests that density dependence is a key driver of fish size structure.

Planktivorous and benthivorous fish have been documented to influence the density and size structure of their prey communities in lakes. We hypothesized that piscivorous fish modify their prey fish communities in the same way and sought to find evidence for such predation effects from a comparison across 356 lakes located in nine European ecoregions. We categorized individual fish as being either piscivore, non-piscivore or prey of piscivores, depending on species and individual size. We calculated piscivore, non-piscivore and piscivore prey densities, respectively, and fit linear abundance size spectra (SS) on lake-specific piscivore, non-piscivore and piscivore prey size distributions. Multiple linear regressions were calculated to quantify the effect of piscivore density and SS slopes on non-piscivore and piscivore prey densities and SS slopes, by accounting for potentially confounding factors arising from lake morphometry, productivity and local air temperature. Piscivore density correlated positively with piscivore prey density, but was uncorrelated to density of non-piscivores. Across a subset of 76 lakes for which SS slopes of piscivores were statistically significant, SS slopes of piscivores were uncorrelated with SS slopes of either non-piscivores or piscivore prey. However, densities of piscivores, non-piscivores or piscivore prey were a significant negative predictor of SS slopes of the respective groups. Our analyses suggest that direct predation effects by piscivorous fish on density and size structure of prey fish communities are weak in European lakes, likely caused by low predator-prey size ratios and the resulting size refuges for prey fish. In contrast, competition may substantially contribute to between-lake variability in fish density and size.

A method for the measurement of the size diversity based on the classical Shannon–Wiener expression was proposed as a proxy of the shape of the size distribution. The summatory of probabilities of a discrete variable (such as species relative abundances) in the original Shannon–Wiener expression was substituted by an integral of the probability density function of a continuous variable (such as body size). Here, we propose an update of this method by including the measurement of the size e-evenness, just dividing the exponential of the size diversity by its possible maximum for a given size range. Assuming a domain of the size range of (0,8), for a given logarithmic mean ( math formula) and a logarithmic standard deviation math formula, the distribution with the highest diversity is the Log-Normal. The size e-evenness ranges between 0 and 1 because of the division by the maximum exponential diversity. Size e-evenness is useful to discriminate whether variations in size diversity are due to changes in the shape of the size distribution or caused by differences in size dispersion., Peer Reviewed, Postprint (published version)

1. The implementation of the Water Framework Directive requires EU member states to establish and harmonise ecological status class boundaries for biological quality elements. In this paper, we describe an approach for defining ecological class boundaries that delineates shifts in lake ecosystem functioning and, therefore, provide ecologically meaningful targets for water policy in Europe. 2. We collected an extensive dataset of 810 lake-years from nine Central European countries, and we used phytoplankton chlorophyll-a, a metric widely used to measure the impact of eutrophication in lakes. Our approach establishes chlorophyll-a target values in relation to three significant ecological effects of eutrophication: the decline of aquatic macrophytes, the dominance of potentially harmful cyanobacteria and the major functional switch from a clear-water to a turbid state. 3. Ranges of threshold chlorophyll-a concentrations are given for the two most common lake types in lowland Central Europe: for moderately deep lakes (mean depth 3-15 m), the greatest ecological shifts occur in the range 10-12 µg L-1 chlorophyll-a, and for shallow lakes (<3 m mean depth), in the range 21-23 µg L-1 chlorophyll-a. 4. Synthesis and applications. Our study provides class boundaries for determining the ecological status of lakes, which have robust ecological consequences for lake functioning and which, therefore, provide strong and objective targets for sustainable water management in Europe. The results have been endorsed by all participant member states and adopted in the European Commission legislation (EC 2008), marking the first attempt in international water policy to move from physico-chemical quality standards to harmonised ecologically based quality targets.

Aim: Our aim was to document geographical patterns of variation in the body-size structure of European lake fish assemblages along abiotic gradients, and any differences in fish assemblage structure. We hypothesized that patterns in the body-size structure of entire lake fish assemblages are primarily temperature driven and consistent with the dominant pattern of the temperature–size rule, which suggests a decrease in adult body size with increasing developmental temperature for many ectothermic species. Location: 356 European lakes. Methods: Variation in the body-size structure of fish assemblages was explored on a continental scale along gradients of temperature, morphometry, productivity and fish assemblage structure for 356 European lakes. The mean fish assemblage body-size and individual body-size distributions were selected as size metrics. Separate analyses were conducted for lakes located within five ecoregion subsets (Borealic Uplands/Tundra, FennoScandian Shield, Central Plains, Western Plains and Western Highlands) and for lakes with different functional fish classifications (cold-, cool- and warmwater fish assemblages). Results: Geographical patterns of variation in the body-size structure of European lake fish assemblages could be clearly discerned along a temperature gradient for both the continental dataset (356 lakes) and the smaller geographical (ecoregion) subsets. We found systematic changes in fish assemblage body-size structure across temperature gradients in correspondence with the dominant thermal fish guild. The majority of the lakes, mainly located in the warmer European lowlands, were dominated by eurythermic cool- and warmwater fish assemblages, with smaller sized individuals characterized by linear individual body-size distributions. Lakes located in colder regions and dominated by stenothermic coldwater salmonids with larger sized individuals were characterized by unimodal or bimodal size distributions. The mean body size of cold-, cool

1. The implementation of the Water Framework Directive requires EU member states to establish and harmonise ecological status class boundaries for biological quality elements. In this paper, we describe an approach for defining ecological class boundaries that delineates shifts in lake ecosystem functioning and, therefore, provide ecologically meaningful targets for water policy in Europe. 2. We collected an extensive dataset of 810 lake-years from nine Central European countries, and we used phytoplankton chlorophyll-a, a metric widely used to measure the impact of eutrophication in lakes. Our approach establishes chlorophyll-a target values in relation to three significant ecological effects of eutrophication: the decline of aquatic macrophytes, the dominance of potentially harmful cyanobacteria and the major functional switch from a clear-water to a turbid state. 3. Ranges of threshold chlorophyll-a concentrations are given for the two most common lake types in lowland Central Europe: for moderately deep lakes (mean depth 3-15 m), the greatest ecological shifts occur in the range 10-12 µg L-1 chlorophyll-a, and for shallow lakes (<3 m mean depth), in the range 21-23 µg L-1 chlorophyll-a. 4. Synthesis and applications. Our study provides class boundaries for determining the ecological status of lakes, which have robust ecological consequences for lake functioning and which, therefore, provide strong and objective targets for sustainable water management in Europe. The results have been endorsed by all participant member states and adopted in the European Commission legislation (EC 2008), marking the first attempt in international water policy to move from physico-chemical quality standards to harmonised ecologically based quality targets.

Aim: Our aim was to document geographical patterns of variation in the body-size structure of European lake fish assemblages along abiotic gradients, and any differences in fish assemblage structure. We hypothesized that patterns in the body-size structure of entire lake fish assemblages are primarily temperature driven and consistent with the dominant pattern of the temperature–size rule, which suggests a decrease in adult body size with increasing developmental temperature for many ectothermic species. Location: 356 European lakes. Methods: Variation in the body-size structure of fish assemblages was explored on a continental scale along gradients of temperature, morphometry, productivity and fish assemblage structure for 356 European lakes. The mean fish assemblage body-size and individual body-size distributions were selected as size metrics. Separate analyses were conducted for lakes located within five ecoregion subsets (Borealic Uplands/Tundra, FennoScandian Shield, Central Plains, Western Plains and Western Highlands) and for lakes with different functional fish classifications (cold-, cool- and warmwater fish assemblages). Results: Geographical patterns of variation in the body-size structure of European lake fish assemblages could be clearly discerned along a temperature gradient for both the continental dataset (356 lakes) and the smaller geographical (ecoregion) subsets. We found systematic changes in fish assemblage body-size structure across temperature gradients in correspondence with the dominant thermal fish guild. The majority of the lakes, mainly located in the warmer European lowlands, were dominated by eurythermic cool- and warmwater fish assemblages, with smaller sized individuals characterized by linear individual body-size distributions. Lakes located in colder regions and dominated by stenothermic coldwater salmonids with larger sized individuals were characterized by unimodal or bimodal size distributions. The mean body size of cold-, cool

1. We aimed to distinguish the relative contributions of natural and anthropogenic local factors on patterns of fish diversity in European lakes at different geographical scales. 2. We compiled data from standardised fish monitoring using multimesh benthic gill nets, information on lake morphometry and on geographical, climatic and anthropogenic pressure variables from 1632 lakes in 11 European countries. By means of regression trees, we determined those natural and anthropogenic factors and their thresholds that best predicted local fish diversity, density and mean size. Generalised linear models were used to assess the influence of anthropogenic factors at smaller geographical and morphometric scales. 3. Local fish species richness and diversity were related mainly to morphometric and (bio)geographical/climatic variables. Larger and deeper lakes in warm areas tended to be the most species rich and diverse. Fish density was related mainly to anthropogenically driven productivity but also was sensitive to geographical/climatic factors. Thus, warmer and shallower lower-altitude European lakes, which are usually more eutrophic, had higher fish densities than cold and deeper higher-altitude lakes. Fish size increased with altitude and declined with increasing seasonality and temperature. 4. After controlling for the natural factors, productivity had a positive effect on fish species richness and diversity, whereas it negatively influenced fish size. 5. Our results suggest that macroecological patterns of lake fish diversity across Europe are best predicted by natural factors. The contribution of anthropogenic factors to fish diversity was evident only via the effect of eutrophication at smaller geographical scales, whereas no effect could be found from hydromorphological pressures. From an applied perspective, these results suggest that bioassessment and biodiversity evaluation might be most effectively conducted and interpreted locally, where anthropogenic effects on

1. We aimed to distinguish the relative contributions of natural and anthropogenic local factors on patterns of fish diversity in European lakes at different geographical scales. 2. We compiled data from standardised fish monitoring using multimesh benthic gill nets, information on lake morphometry and on geographical, climatic and anthropogenic pressure variables from 1632 lakes in 11 European countries. By means of regression trees, we determined those natural and anthropogenic factors and their thresholds that best predicted local fish diversity, density and mean size. Generalised linear models were used to assess the influence of anthropogenic factors at smaller geographical and morphometric scales. 3. Local fish species richness and diversity were related mainly to morphometric and (bio)geographical/climatic variables. Larger and deeper lakes in warm areas tended to be the most species rich and diverse. Fish density was related mainly to anthropogenically driven productivity but also was sensitive to geographical/climatic factors. Thus, warmer and shallower lower-altitude European lakes, which are usually more eutrophic, had higher fish densities than cold and deeper higher-altitude lakes. Fish size increased with altitude and declined with increasing seasonality and temperature. 4. After controlling for the natural factors, productivity had a positive effect on fish species richness and diversity, whereas it negatively influenced fish size. 5. Our results suggest that macroecological patterns of lake fish diversity across Europe are best predicted by natural factors. The contribution of anthropogenic factors to fish diversity was evident only via the effect of eutrophication at smaller geographical scales, whereas no effect could be found from hydromorphological pressures. From an applied perspective, these results suggest that bioassessment and biodiversity evaluation might be most effectively conducted and interpreted locally, where anthropogenic effects on

1. Sampling of lake fish assemblages is a challenging task in fish science, and the information obtained strongly depends on the choice of sampling gear. The use of more than one sampling technique is generally preferred in order to achieve a comprehensive view on fish assemblage structure. Therefore, the knowledge of whether catches between fishing gears are comparable is crucial. 2. We compared catches in benthic multi-mesh gillnets with fish biomass estimates obtained by vertical hydroacoustics in 18 European lakes strongly varying in morphometry and trophic status. Separate analyses were conducted for different depth strata and for several fish length thresholds to account for depth- and size-selective gillnet catches. 3. Gillnet catches and hydroacoustically obtained fish biomass estimates were significantly correlated. The strength of correlations was independent of the fish length thresholds applied, but varied across different depth strata of the lakes, with the strongest correlations occurring in the shallow strata. 4. The results support the applicability of vertical hydroacoustics for the quantification of fish biomass in stratified lakes. Survey designs combining hydroacoustics with limited gillnetting at sampling dates shortly one after the other, the latter for the purpose of inventory sampling only, are a cost-effective strategy for sampling fish assemblages in lakes. However, gillnet sampling does not provide reliable fish density estimates in very deep lakes with separate, pelagic-dwelling fish assemblages.

1. Sampling of lake fish assemblages is a challenging task in fish science, and the information obtained strongly depends on the choice of sampling gear. The use of more than one sampling technique is generally preferred in order to achieve a comprehensive view on fish assemblage structure. Therefore, the knowledge of whether catches between fishing gears are comparable is crucial. 2. We compared catches in benthic multi-mesh gillnets with fish biomass estimates obtained by vertical hydroacoustics in 18 European lakes strongly varying in morphometry and trophic status. Separate analyses were conducted for different depth strata and for several fish length thresholds to account for depth- and size-selective gillnet catches. 3. Gillnet catches and hydroacoustically obtained fish biomass estimates were significantly correlated. The strength of correlations was independent of the fish length thresholds applied, but varied across different depth strata of the lakes, with the strongest correlations occurring in the shallow strata. 4. The results support the applicability of vertical hydroacoustics for the quantification of fish biomass in stratified lakes. Survey designs combining hydroacoustics with limited gillnetting at sampling dates shortly one after the other, the latter for the purpose of inventory sampling only, are a cost-effective strategy for sampling fish assemblages in lakes. However, gillnet sampling does not provide reliable fish density estimates in very deep lakes with separate, pelagic-dwelling fish assemblages.

Earth's climate is changing, and by the end of the 21st century in Europe, average temperatures are likely to have risen by at least 2 °C, and more likely 4 °C with associated effects on patterns of precipitation and the frequency of extreme weather events. Attention among policy-makers is divided about how to minimise the change, how to mitigate its effects, how to maintain the natural resources on which societies depend and how to adapt human societies to the changes. Natural systems are still seen, through a long tradition of conservation management that is largely species-based, as amenable to adaptive management, and biodiversity, mostly perceived as the richness of plant and vertebrate communities, often forms a focus for planning. We argue that prediction of particular species changes will be possible only in a minority of cases but that prediction of trends in general structure and operation of four generic freshwater ecosystems (erosive rivers, depositional floodplain rivers, shallow lakes and deep lakes) in three broad zones of Europe (Mediterranean, Central and Arctic-Boreal) is practicable. Maintenance and rehabilitation of ecological structures and operations will inevitably and incidentally embrace restoration of appropriate levels of species biodiversity. Using expert judgement, based on an extensive literature, we have outlined, primarily for lay policy makers, the pristine features of these systems, their states under current human impacts, how these states are likely to alter with a warming of 2 °C to 4 °C and what might be done to mitigate this. We have avoided technical terms in the interests of communication, and although we have included full referencing as in academic papers, we have eliminated degrees of detail that could confuse broad policy-making

Earth’s climate is changing, and by the end of the 21st century in Europe, average temperatures are likely to have risen by at least 2 °C, and more likely 4 °C, with associated effects on patterns of precipitation and the frequency of extreme weather events. Attention among policy-makers is divided about how to minimise the change, how to mitigate its effects, how to maintain the natural resources on which societies depend and how to adapt human societies to the changes. Natural systems are still seen, through a long tradition of conservation management that is largely species-based, as amenable to adaptive management, and biodiversity, mostly perceived as the richness of plant and vertebrate communities, often forms a focus for planning. We argue that prediction of particular species changes will be possible only in a minority of cases but that prediction of trends in general structure and operation of four generic freshwater ecosystems (erosive rivers, depositional floodplain rivers, shallow lakes and deep lakes) in three broad zones of Europe (Mediterranean, Central and Arctic-Boreal) is practicable. Maintenance and rehabilitation of ecological structures and operations will inevitably and incidentally embrace restoration of appropriate levels of species biodiversity. Using expert judgement, based on an extensive literature, we have outlined, primarily for lay policy makers, the pristine features of these systems, their states under current human impacts, how these states are likely to alter with a warming of 2 °C to 4 °C and what might be done to mitigate this. We have avoided technical terms in the interests of communication, and although we have included full referencing as in academic papers, we have eliminated degrees of detail that could confuse broad policy-making.

Earth’s climate is changing, and by the end of the 21st century in Europe, average temperatures are likely to have risen by at least 2 °C, and more likely 4 °C, with associated effects on patterns of precipitation and the frequency of extreme weather events. Attention among policy-makers is divided about how to minimise the change, how to mitigate its effects, how to maintain the natural resources on which societies depend and how to adapt human societies to the changes. Natural systems are still seen, through a long tradition of conservation management that is largely species-based, as amenable to adaptive management, and biodiversity, mostly perceived as the richness of plant and vertebrate communities, often forms a focus for planning. We argue that prediction of particular species changes will be possible only in a minority of cases but that prediction of trends in general structure and operation of four generic freshwater ecosystems (erosive rivers, depositional floodplain rivers, shallow lakes and deep lakes) in three broad zones of Europe (Mediterranean, Central and Arctic-Boreal) is practicable. Maintenance and rehabilitation of ecological structures and operations will inevitably and incidentally embrace restoration of appropriate levels of species biodiversity. Using expert judgement, based on an extensive literature, we have outlined, primarily for lay policy makers, the pristine features of these systems, their states under current human impacts, how these states are likely to alter with a warming of 2 °C to 4 °C and what might be done to mitigate this. We have avoided technical terms in the interests of communication, and although we have included full referencing as in academic papers, we have eliminated degrees of detail that could confuse broad policy-making.

The taxonomic structure of phytoplankton populations in two Mediterranean coastal lagoons were compared with those of nearby marine waters (external waters). Mediterranean confined lagoons remain isolated for most the year and concentrate phytoplankton to a very high biomass. Coastal lagoons on the Mediterranean may, therefore, act as accumulators of neritic phytoplankton (including species related to harmful algal blooms). We examined whether coastal lagoons act as concentrators of marine toxic dinoflagellates during confinement periods, and the common environmental factors that favour growth of specific harmful species in the two ecosystems considered: coastal lagoons and external waters. An alternation between the dominance of diatoms and dinoflagellates was observed, coinciding with that described in Margalef's mandala, occurring in external waters as well as in coastal lagoons. Moreover, the temporal patter was different in the two ecosystems. Dinoflagellate species composition and their bloom period were highly variable in time and space, thus, species had to be analysed individually. Most of the dinoflagellate species found in this study were potentially harmful and high biomass producers. Harmful dinoflagellate species performed well in both, external waters and lagoons, but the specific species-dependent affinity to each of these environments determined which organisms bloom there. Thus, expansion of harmful algal blooms (HAB) to inland waters is not likely and some environmental factors such as the oxidised state of available nitrogen, became determinant to the success and bloom of a species in the coastal lagoon ecosystem