Search

Freshwater macroinvertebrates are a diverse group and play key ecological roles, including accelerating nutrient cycling, filtering water, controlling primary producers, and providing food for predators. Their differences in tolerances and short generation times manifest in rapid community responses to change. Macroinvertebrate community composition is an indicator of water quality. In Europe, efforts to improve water quality following environmental legislation, primarily starting in the 1980s, may have driven a recovery of macroinvertebrate communities. Towards understanding temporal and spatial variation of these organisms, we compiled the TREAM dataset (Time seRies of European freshwAter Macroinvertebrates), consisting of macroinvertebrate community time series from 1,816 river and stream sites (mean length of 19.2 years and 14.9 sampling years) of 22 European countries sampled between 1968 and 2020. In total, the data include >93 million sampled individuals of 2,648 taxa from 959 genera and 212 families. These data can be used to test questions ranging from identifying drivers of the population dynamics of specific taxa to assessing the success of legislative and management restoration efforts.

As alien invasive species are a key driver of biodiversity loss, understanding patterns of rapidly changing global species compositions depends upon knowledge of invasive species population dynamics and trends at large scales. Within this context, the Ponto-Caspian region is among the most notable donor regions for aquatic invasive species in Europe. Using macroinvertebrate time series collected over 52 years (1968–2020) at 265 sites across 11 central and western European countries, we examined the occurrences, invasion rates, and abundances of freshwater Ponto-Caspian fauna. We examined whether: (i) successive Ponto-Caspian invasions follow a consistent pattern of composition pioneered by the same species, and (ii) Ponto-Caspian invasion accelerates subsequent invasion rates. In our dataset, Ponto-Caspian macroinvertebrates increased from two species in 1972 to 29 species in 2012. This trend was parallelled by a non-significant increasing trend in the abundances of Ponto-Caspian taxa. Trends in Ponto-Caspian invader richness increased significantly over time. We found a relatively uniform distribution of Ponto-Caspian macroinvertebrates across Europe without any relation to the distance to their native region. The Ponto-Caspian species that arrived first were often bivalves (46.5% of cases), particularly Dreissena polymorpha, followed secondarily by amphipods (83.8%; primarily Chelicorophium curvispinum and Dikerogammarus villosus). The time between consecutive invasions decreased significantly at our coarse regional scale, suggesting that previous alien establishments may facilitate invasions of subsequent taxa. Should alien species continue to translocate from the Ponto-Caspian region, our results suggest a high potential for their future invasion success highly connected central and western European waters. However, each species’ population may decline after an initial ‘boom’ phase or after the arrival of new invasive species, resulting in different alien specie

Europe has experienced a substantial increase in non-indigenous crayfish species (NICS) since the mid-20th century due to their extensive use in fisheries, aquaculture and, more recently, pet trade. Despite relatively long invasion histories of some NICS and negative impacts on biodiversity and ecosystem functioning, large spatio-temporal analyses of their occurrences are lacking. Here, we used a large freshwater macroinvertebrate database to evaluate what information on NICS can be obtained from widely applied biomonitoring approaches and how usable such data is for descriptions of trends in identified NICS species. We found 160 time-series containing NICS between 1983 and 2019, to infer temporal patterns and environmental drivers of species and region-specific trends. Using a combination of meta-regression and generalized linear models, we found no significant temporal trend for the abundance of any species (Procambarus clarkii, Pacifastacus leniusculus or Faxonius limosus) at the European scale, but identified species-specific predictors of abundances. While analysis of the spatial range expansion of NICS was positive (i.e. increasing spread) in England and negative (significant retreat) in northern Spain, no trend was detected in Hungary and the Dutch-German-Luxembourg region. The average invasion velocity varied among countries, ranging from 30 km/year in England to 90 km/year in Hungary. The average invasion velocity gradually decreased over time in the long term, with declines being fastest in the Dutch-German-Luxembourg region, and much slower in England. Considering that NICS pose a substantial threat to aquatic biodiversity across Europe, our study highlights the utility and importance of collecting high resolution (i.e. annual) biomonitoring data using a sampling protocol that is able to estimate crayfish abundance, enabling a more profound understanding of NICS impacts on biodiversity.

As alien invasive species are a key driver of biodiversity loss, understanding patterns of rapidly changing global species compositions depends upon knowledge of invasive species population dynamics and trends at large scales. Within this context, the Ponto-Caspian region is among the most notable donor regions for aquatic invasive species in Europe. Using macroinvertebrate time series collected over 52 years (1968–2020) at 265 sites across 11 central and western European countries, we examined the occurrences, invasion rates, and abundances of freshwater Ponto-Caspian fauna. We examined whether: (i) successive Ponto-Caspian invasions follow a consistent pattern of composition pioneered by the same species, and (ii) Ponto-Caspian invasion accelerates subsequent invasion rates. In our dataset, Ponto-Caspian macroinvertebrates increased from two species in 1972 to 29 species in 2012. This trend was parallelled by a non-significant increasing trend in the abundances of Ponto-Caspian taxa. Trends in Ponto-Caspian invader richness increased significantly over time. We found a relatively uniform distribution of Ponto-Caspian macroinvertebrates across Europe without any relation to the distance to their native region. The Ponto-Caspian species that arrived first were often bivalves (46.5% of cases), particularly Dreissena polymorpha, followed secondarily by amphipods (83.8%; primarily Chelicorophium curvispinum and Dikerogammarus villosus). The time between consecutive invasions decreased significantly at our coarse regional scale, suggesting that previous alien establishments may facilitate invasions of subsequent taxa. Should alien species continue to translocate from the Ponto-Caspian region, our results suggest a high potential for their future invasion success highly connected central and western European waters. However, each species’ population may decline after an initial ‘boom’ phase or after the arrival of new invasive species, resulting in different alien specie

Owing to a long history of anthropogenic pressures, freshwater ecosystems are among the most vulnerable to biodiversity loss(1). Mitigation measures, including wastewater treatment and hydromorphological restoration, have aimed to improve environmental quality and foster the recovery of freshwater biodiversity(2). Here, using 1,816 time series of freshwater invertebrate communities collected across 22 European countries between 1968 and 2020, we quantified temporal trends in taxonomic and functional diversity and their responses to environmental pressures and gradients. We observed overall increases in taxon richness (0.73% per year), functional richness (2.4% per year) and abundance (1.17% per year). However, these increases primarily occurred before the 2010s, and have since plateaued. Freshwater communities downstream of dams, urban areas and cropland were less likely to experience recovery. Communities at sites with faster rates of warming had fewer gains in taxon richness, functional richness and abundance. Although biodiversity gains in the 1990s and 2000s probably reflect the effectiveness of water-quality improvements and restoration projects, the decelerating trajectory in the 2010s suggests that the current measures offer diminishing returns. Given new and persistent pressures on freshwater ecosystems, including emerging pollutants, climate change and the spread of invasive species, we call for additional mitigation to revive the recovery of freshwater biodiversity.

Owing to a long history of anthropogenic pressures, freshwater ecosystems are among the most vulnerable to biodiversity loss1 . Mitigation measures, including wastewater treatment and hydromorphological restoration, have aimed to improve environmental quality and foster the recovery of freshwater biodiversity2 . Here, using 1,816 time series of freshwater invertebrate communities collected across 22 European countries between 1968 and 2020, we quantifed temporal trends in taxonomic and functional diversity and their responses to environmental pressures and gradients. We observed overall increases in taxon richness (0.73% per year), functional richness (2.4% per year) and abundance (1.17% per year). However, these increases primarily occurred before the 2010s, and have since plateaued. Freshwater communities downstream of dams, urban areas and cropland were less likely to experience recovery. Communities at sites with faster rates of warming had fewer gains in taxon richness, functional richness and abundance. Although biodiversity gains in the 1990s and 2000s probably refect the efectiveness of water-quality improvements and restoration projects, the decelerating trajectory in the 2010s suggests that the current measures ofer diminishing returns. Given new and persistent pressures on freshwater ecosystems, including emerging pollutants, climate change and the spread of invasive species, we call for additional mitigation to revive the recovery of freshwater biodiversity., Owing to a long history of anthropogenic pressures, freshwater ecosystems are among the most vulnerable to biodiversity loss 1. Mitigation measures, including wastewater treatment and hydromorphological restoration, have aimed to improve environmental quality and foster the recovery of freshwater biodiversity 2. Here, using 1,816 time series of freshwater invertebrate communities collected across 22 European countries between 1968 and 2020, we quantified temporal trends in taxonomic and functional diversity and their responses to environmental pressures and gradients. We observed overall increases in taxon richness (0.73% per year), functional richness (2.4% per year) and abundance (1.17% per year). However, these increases primarily occurred before the 2010s, and have since plateaued. Freshwater communities downstream of dams, urban areas and cropland were less likely to experience recovery. Communities at sites with faster rates of warming had fewer gains in taxon richness, functional richness and abundance. Although biodiversity gains in the 1990s and 2000s probably reflect the effectiveness of water-quality improvements and restoration projects, the decelerating trajectory in the 2010s suggests that the current measures offer diminishing returns. Given new and persistent pressures on freshwater ecosystems, including emerging pollutants, climate change and the spread of invasive species, we call for additional mitigation to revive the recovery of freshwater biodiversity.

As alien invasive species are a key driver of biodiversity loss, understanding patterns of rapidly changing global species compositions depends upon knowledge of invasive species population dynamics and trends at large scales. Within this context, the Ponto-Caspian region is among the most notable donor regions for aquatic invasive species in Europe. Using macroinvertebrate time series collected over 52 years (1968–2020) at 265 sites across 11 central and western European countries, we examined the occurrences, invasion rates, and abundances of freshwater Ponto-Caspian fauna. We examined whether: (i) successive Ponto-Caspian invasions follow a consistent pattern of composition pioneered by the same species, and (ii) Ponto-Caspian invasion accelerates subsequent invasion rates. In our dataset, Ponto-Caspian macroinvertebrates increased from two species in 1972 to 29 species in 2012. This trend was parallelled by a non-significant increasing trend in the abundances of Ponto-Caspian taxa. Trends in Ponto-Caspian invader richness increased significantly over time. We found a relatively uniform distribution of Ponto-Caspian macroinvertebrates across Europe without any relation to the distance to their native region. The Ponto-Caspian species that arrived first were often bivalves (46.5% of cases), particularly Dreissena polymorpha, followed secondarily by amphipods (83.8%; primarily Chelicorophium curvispinum and Dikerogammarus villosus). The time between consecutive invasions decreased significantly at our coarse regional scale, suggesting that previous alien establishments may facilitate invasions of subsequent taxa. Should alien species continue to translocate from the Ponto-Caspian region, our results suggest a high potential for their future invasion success highly connected central and western European waters. However, each species’ population may decline after an initial ‘boom’ phase or after the arrival of new invasive species, resulting in different alien specie

Owing to a long history of anthropogenic pressures, freshwater ecosystems are among the most vulnerable to biodiversity loss1. Mitigation measures, including wastewater treatment and hydromorphological restoration, have aimed to improve environmental quality and foster the recovery of freshwater biodiversity2. Here, using 1,816 time series of freshwater invertebrate communities collected across 22 European countries between 1968 and 2020, we quantified temporal trends in taxonomic and functional diversity and their responses to environmental pressures and gradients. We observed overall increases in taxon richness (0.73% per year), functional richness (2.4% per year) and abundance (1.17% per year). However, these increases primarily occurred before the 2010s, and have since plateaued. Freshwater communities downstream of dams, urban areas and cropland were less likely to experience recovery. Communities at sites with faster rates of warming had fewer gains in taxon richness, functional richness and abundance. Although biodiversity gains in the 1990s and 2000s probably reflect the effectiveness of water-quality improvements and restoration projects, the decelerating trajectory in the 2010s suggests that the current measures offer diminishing returns. Given new and persistent pressures on freshwater ecosystems, including emerging pollutants, climate change and the spread of invasive species, we call for additional mitigation to revive the recovery of freshwater biodiversity.

As alien invasive species are a key driver of biodiversity loss, understanding patterns of rapidly changing global species compositions depends upon knowledge of invasive species population dynamics and trends at large scales. Within this context, the Ponto-Caspian region is among the most notable donor regions for aquatic invasive species in Europe. Using macroinvertebrate time series collected over 52 years (1968–2020) at 265 sites across 11 central and western European countries, we examined the occurrences, invasion rates, and abundances of freshwater Ponto-Caspian fauna. We examined whether: (i) successive Ponto-Caspian invasions follow a consistent pattern of composition pioneered by the same species, and (ii) Ponto-Caspian invasion accelerates subsequent invasion rates. In our dataset, Ponto-Caspian macroinvertebrates increased from two species in 1972 to 29 species in 2012. This trend was parallelled by a non-significant increasing trend in the abundances of Ponto-Caspian taxa. Trends in Ponto-Caspian invader richness increased significantly over time. We found a relatively uniform distribution of Ponto-Caspian macroinvertebrates across Europe without any relation to the distance to their native region. The Ponto-Caspian species that arrived first were often bivalves (46.5% of cases), particularly Dreissena polymorpha, followed secondarily by amphipods (83.8%; primarily Chelicorophium curvispinum and Dikerogammarus villosus). The time between consecutive invasions decreased significantly at our coarse regional scale, suggesting that previous alien establishments may facilitate invasions of subsequent taxa. Should alien species continue to translocate from the Ponto-Caspian region, our results suggest a high potential for their future invasion success highly connected central and western European waters. However, each species’ population may decline after an initial ‘boom’ phase or after the arrival of new invasive species, resulting in different alien specie

As alien invasive species are a key driver of biodiversity loss, understanding patterns of rapidly changing global species compositions depends upon knowledge of invasive species population dynamics and trends at large scales. Within this context, the Ponto-Caspian region is among the most notable donor regions for aquatic invasive species in Europe. Using macroinvertebrate time series collected over 52 years (1968–2020) at 265 sites across 11 central and western European countries, we examined the occurrences, invasion rates, and abundances of freshwater Ponto-Caspian fauna. We examined whether: (i) successive Ponto-Caspian invasions follow a consistent pattern of composition pioneered by the same species, and (ii) Ponto-Caspian invasion accelerates subsequent invasion rates. In our dataset, Ponto-Caspian macroinvertebrates increased from two species in 1972 to 29 species in 2012. This trend was parallelled by a non-significant increasing trend in the abundances of Ponto-Caspian taxa. Trends in Ponto-Caspian invader richness increased significantly over time. We found a relatively uniform distribution of Ponto-Caspian macroinvertebrates across Europe without any relation to the distance to their native region. The Ponto-Caspian species that arrived first were often bivalves (46.5% of cases), particularly Dreissena polymorpha, followed secondarily by amphipods (83.8%; primarily Chelicorophium curvispinum and Dikerogammarus villosus). The time between consecutive invasions decreased significantly at our coarse regional scale, suggesting that previous alien establishments may facilitate invasions of subsequent taxa. Should alien species continue to translocate from the Ponto-Caspian region, our results suggest a high potential for their future invasion success highly connected central and western European waters. However, each species’ population may decline after an initial ‘boom’ phase or after the arrival of new invasive species, resulting in different alien specie

Europe has experienced a substantial increase in non-indigenous crayfish species (NICS) since the mid-20th century due to their extensive use in fisheries, aquaculture and, more recently, pet trade. Despite relatively long invasion histories of some NICS and negative impacts on biodiversity and ecosystem functioning, large spatio-temporal analyses of their occurrences are lacking. Here, we used a large freshwater macroinvertebrate database to evaluate what information on NICS can be obtained from widely applied biomonitoring approaches and how usable such data is for descriptions of trends in identified NICS species. We found 160 time-series containing NICS between 1983 and 2019, to infer temporal patterns and environmental drivers of species and region-specific trends. Using a combination of meta-regression and generalized linear models, we found no significant temporal trend for the abundance of any species (Procambarus clarkii, Pacifastacus leniusculus or Faxonius limosus) at the European scale, but identified species-specific predictors of abundances. While analysis of the spatial range expansion of NICS was positive (i.e. increasing spread) in England and negative (significant retreat) in northern Spain, no trend was detected in Hungary and the Dutch-German-Luxembourg region. The average invasion velocity varied among countries, ranging from 30 km/year in England to 90 km/year in Hungary. The average invasion velocity gradually decreased over time in the long term, with declines being fastest in the Dutch-German-Luxembourg region, and much slower in England. Considering that NICS pose a substantial threat to aquatic biodiversity across Europe, our study highlights the utility and importance of collecting high resolution (i.e. annual) biomonitoring data using a sampling protocol that is able to estimate crayfish abundance, enabling a more profound understanding of NICS impacts on biodiversity.

As alien invasive species are a key driver of biodiversity loss, understanding patterns of rapidly changing global species compositions depends upon knowledge of invasive species population dynamics and trends at large scales. Within this context, the Ponto-Caspian region is among the most notable donor regions for aquatic invasive species in Europe. Using macroinvertebrate time series collected over 52 years (1968–2020) at 265 sites across 11 central and western European countries, we examined the occurrences, invasion rates, and abundances of freshwater Ponto-Caspian fauna. We examined whether: (i) successive Ponto-Caspian invasions follow a consistent pattern of composition pioneered by the same species, and (ii) Ponto-Caspian invasion accelerates subsequent invasion rates. In our dataset, Ponto-Caspian macroinvertebrates increased from two species in 1972 to 29 species in 2012. This trend was parallelled by a non-significant increasing trend in the abundances of Ponto-Caspian taxa. Trends in Ponto-Caspian invader richness increased significantly over time. We found a relatively uniform distribution of Ponto-Caspian macroinvertebrates across Europe without any relation to the distance to their native region. The Ponto-Caspian species that arrived first were often bivalves (46.5% of cases), particularly Dreissena polymorpha, followed secondarily by amphipods (83.8%; primarily Chelicorophium curvispinum and Dikerogammarus villosus). The time between consecutive invasions decreased significantly at our coarse regional scale, suggesting that previous alien establishments may facilitate invasions of subsequent taxa. Should alien species continue to translocate from the Ponto-Caspian region, our results suggest a high potential for their future invasion success highly connected central and western European waters. However, each species’ population may decline after an initial ‘boom’ phase or after the arrival of new invasive species, resulting in different alien specie

Owing to a long history of anthropogenic pressures, freshwater ecosystems are among the most vulnerable to biodiversity loss1 . Mitigation measures, including wastewater treatment and hydromorphological restoration, have aimed to improve environmental quality and foster the recovery of freshwater biodiversity2 . Here, using 1,816 time series of freshwater invertebrate communities collected across 22 European countries between 1968 and 2020, we quantifed temporal trends in taxonomic and functional diversity and their responses to environmental pressures and gradients. We observed overall increases in taxon richness (0.73% per year), functional richness (2.4% per year) and abundance (1.17% per year). However, these increases primarily occurred before the 2010s, and have since plateaued. Freshwater communities downstream of dams, urban areas and cropland were less likely to experience recovery. Communities at sites with faster rates of warming had fewer gains in taxon richness, functional richness and abundance. Although biodiversity gains in the 1990s and 2000s probably refect the efectiveness of water-quality improvements and restoration projects, the decelerating trajectory in the 2010s suggests that the current measures ofer diminishing returns. Given new and persistent pressures on freshwater ecosystems, including emerging pollutants, climate change and the spread of invasive species, we call for additional mitigation to revive the recovery of freshwater biodiversity., Owing to a long history of anthropogenic pressures, freshwater ecosystems are among the most vulnerable to biodiversity loss 1. Mitigation measures, including wastewater treatment and hydromorphological restoration, have aimed to improve environmental quality and foster the recovery of freshwater biodiversity 2. Here, using 1,816 time series of freshwater invertebrate communities collected across 22 European countries between 1968 and 2020, we quantified temporal trends in taxonomic and functional diversity and their responses to environmental pressures and gradients. We observed overall increases in taxon richness (0.73% per year), functional richness (2.4% per year) and abundance (1.17% per year). However, these increases primarily occurred before the 2010s, and have since plateaued. Freshwater communities downstream of dams, urban areas and cropland were less likely to experience recovery. Communities at sites with faster rates of warming had fewer gains in taxon richness, functional richness and abundance. Although biodiversity gains in the 1990s and 2000s probably reflect the effectiveness of water-quality improvements and restoration projects, the decelerating trajectory in the 2010s suggests that the current measures offer diminishing returns. Given new and persistent pressures on freshwater ecosystems, including emerging pollutants, climate change and the spread of invasive species, we call for additional mitigation to revive the recovery of freshwater biodiversity.

The relationship between body mass (M) and size class abundance (N) depicts patterns of community structure and energy flow through food webs. While the general assumption is that M and N scale linearly (on log–log axes), nonlinearity is regularly observed in natural systems, and is theorized to be driven by nonlinear scaling of trophic level (TL) with M resulting in the rapid transfer of energy to consumers in certain size classes. We tested this hypothesis with data from 31 stream food webs. We predicted that allochthonous subsidies higher in the web results in nonlinear M–TL relationships and systematic abundance peaks in macroinvertebrate and fish size classes (latter containing salmonids), that exploit terrestrial plant material and terrestrial invertebrates, respectively. Indeed, both M–N and M–TL significantly deviated from linear relationships and the observed curvature in M–TL scaling was inversely related to that observed in M–N relationships. Systemic peaks in M–N, and troughs in M–TL occurred in size classes dominated by generalist invertebrates, and brown trout. Our study reveals how allochthonous resources entering high in the web systematically shape community size structure and demonstrates the relevance of a generalized metabolic scaling model for understanding patterns of energy transfer in energetically ‘open’ food webs.

The relationship between body mass (M) and size class abundance (N) depicts patterns of community structure and energy flow through food webs. While the general assumption is that M and N scale linearly (on log–log axes), nonlinearity is regularly observed in natural systems, and is theorized to be driven by nonlinear scaling of trophic level (TL) with M resulting in the rapid transfer of energy to consumers in certain size classes. We tested this hypothesis with data from 31 stream food webs. We predicted that allochthonous subsidies higher in the web results in nonlinear M–TL relationships and systematic abundance peaks in macroinvertebrate and fish size classes (latter containing salmonids), that exploit terrestrial plant material and terrestrial invertebrates, respectively. Indeed, both M–N and M–TL significantly deviated from linear relationships and the observed curvature in M–TL scaling was inversely related to that observed in M–N relationships. Systemic peaks in M–N, and troughs in M–TL occurred in size classes dominated by generalist invertebrates, and brown trout. Our study reveals how allochthonous resources entering high in the web systematically shape community size structure and demonstrates the relevance of a generalized metabolic scaling model for understanding patterns of energy transfer in energetically ‘open’ food webs.

The growing use of functional traits in ecological research has brought new insights into biodiversity responses to global environmental change. However, further progress depends on overcoming three major challenges involving (a) statistical correlations between traits, (b) phylogenetic constraints on the combination of traits possessed by any single species, and (c) spatial effects on trait structure and trait–environment relationships. Here, we introduce a new framework for quantifying trait correlations, phylogenetic constraints and spatial variability at large scales by combining openly available species’ trait, occurrence and phylogenetic data with gridded, high‐resolution environmental layers and computational modelling. Our approach is suitable for use among a wide range of taxonomic groups inhabiting terrestrial, marine and freshwater habitats. We demonstrate its application using freshwater macroinvertebrate data from 35 countries in Europe. We identified a subset of available macroinvertebrate traits, corresponding to a life‐history model with axes of resistance, resilience and resource use, as relatively unaffected by correlations and phylogenetic constraints. Trait structure responded more consistently to environmental variation than taxonomic structure, regardless of location. A re‐analysis of existing data on macroinvertebrate communities of European alpine streams supported this conclusion, and demonstrated that occurrence‐based functional diversity indices are highly sensitive to the traits included in their calculation. Overall, our findings suggest that the search for quantitative trait–environment relationships using single traits or simple combinations of multiple traits is unlikely to be productive. Instead, there is a need to embrace the value of conceptual frameworks linking community responses to environmental change via traits which correspond to the axes of life‐history models. Through a novel integration of tools and databases, our flexibl

Classical biomonitoring techniques have focused primarily on measures linked to various biodiversity metrics and indicator species. Next-generation biomonitoring (NGB) describes a suite of tools and approaches that allow the examination of a broader spectrum of organizational levels—from genes to entire ecosystems. Here, we frame 10 key questions that we envisage will drive the field of NGB over the next decade. While not exhaustive, this list covers most of the key challenges facing NGB, and provides the basis of the next steps for research and implementation in this field. These questions have been grouped into current- and outlook-related categories, corresponding to the organization of this paper.

Classical biomonitoring techniques have focused primarily on measures linked to various biodiversity metrics and indicator species. Next-generation biomonitoring (NGB) describes a suite of tools and approaches that allow the examination of a broader spectrum of organizational levels—from genes to entire ecosystems. Here, we frame 10 key questions that we envisage will drive the field of NGB over the next decade. While not exhaustive, this list covers most of the key challenges facing NGB, and provides the basis of the next steps for research and implementation in this field. These questions have been grouped into current- and outlook-related categories, corresponding to the organization of this paper.

The growing use of functional traits in ecological research has brought new insights into biodiversity responses to global environmental change. However, further progress depends on overcoming three major challenges involving (a) statistical correlations between traits, (b) phylogenetic constraints on the combination of traits possessed by any single species, and (c) spatial effects on trait structure and trait–environment relationships. Here, we introduce a new framework for quantifying trait correlations, phylogenetic constraints and spatial variability at large scales by combining openly available species’ trait, occurrence and phylogenetic data with gridded, high‐resolution environmental layers and computational modelling. Our approach is suitable for use among a wide range of taxonomic groups inhabiting terrestrial, marine and freshwater habitats. We demonstrate its application using freshwater macroinvertebrate data from 35 countries in Europe. We identified a subset of available macroinvertebrate traits, corresponding to a life‐history model with axes of resistance, resilience and resource use, as relatively unaffected by correlations and phylogenetic constraints. Trait structure responded more consistently to environmental variation than taxonomic structure, regardless of location. A re‐analysis of existing data on macroinvertebrate communities of European alpine streams supported this conclusion, and demonstrated that occurrence‐based functional diversity indices are highly sensitive to the traits included in their calculation. Overall, our findings suggest that the search for quantitative trait–environment relationships using single traits or simple combinations of multiple traits is unlikely to be productive. Instead, there is a need to embrace the value of conceptual frameworks linking community responses to environmental change via traits which correspond to the axes of life‐history models. Through a novel integration of tools and databases, our flexibl

Excess fine sediment, comprising particles <2 mm in diameter, is a major cause of ecological degradation in rivers. The erosion of fine sediment from terrestrial or aquatic sources, its delivery to the river, and its storage and transport in the fluvial environment are controlled by a complex interplay of physical, biological, and anthropogenic factors. While the physical controls exerted on fine sediment dynamics are relatively well‐documented, the role of biological processes and their interactions with hydraulic and physicochemical phenomena has been largely overlooked. The activities of biota, from primary producers to predators, exert strong controls on fine sediment deposition, infiltration, and resuspension. For example, extracellular polymeric substances associated with biofilms increase deposition and decrease resuspension. In lower energy rivers, aquatic macrophyte growth and senescence are intimately linked to sediment retention and loss, whereas riparian trees are dominant ecosystem engineers in high energy systems. Fish and invertebrates also have profound effects on fine sediment dynamics through activities that drive both particle deposition and erosion depending on species composition and abiotic conditions. The functional traits of species present will determine not only these biotic effects but also the responses of river ecosystems to excess fine sediment. We discuss which traits are involved and put them into context with spatial processes that occur throughout the river network. While strides towards better understanding of the impacts of excess fine sediment have been made, further progress to identify the most effective management approaches is urgently required through close communication between authorities and scientists.

Excess fine sediment, comprising particles <2 mm in diameter, is a major cause of ecological degradation in rivers. The erosion of fine sediment from terrestrial or aquatic sources, its delivery to the river, and its storage and transport in the fluvial environment are controlled by a complex interplay of physical, biological and anthropogenic factors. Whilst the physical controls exerted on fine sediment dynamics are relatively well-documented, the role of biological processes and their interactions with hydraulic and physico-chemical phenomena has been largely overlooked. The activities of biota, from primary producers to predators, exert strong controls on fine sediment deposition, infiltration and resuspension. For example, extracellular polymeric substances (EPS) associated with biofilms increase deposition and decrease resuspension. In lower energy rivers, aquatic macrophyte growth and senescence are intimately linked to sediment retention and loss, whereas riparian trees are dominant ecosystem engineers in high energy systems. Fish and invertebrates also have profound effects on fine sediment dynamics through activities that drive both particle deposition and erosion depending on species composition and abiotic conditions. The functional traits of species present will determine not only these biotic effects but also the responses of river ecosystems to excess fine sediment. We discuss which traits are involved and put them into context with spatial processes that occur throughout the river network. Whilst strides towards better understanding of the impacts of excess fine sediment have been made, further progress to identify the most effective management approaches is urgently required through close communication between authorities and scientists.

Excess fine sediment, comprising particles <2 mm in diameter, is a major cause of ecological degradation in rivers. The erosion of fine sediment from terrestrial or aquatic sources, its delivery to the river, and its storage and transport in the fluvial environment are controlled by a complex interplay of physical, biological and anthropogenic factors. Whilst the physical controls exerted on fine sediment dynamics are relatively well-documented, the role of biological processes and their interactions with hydraulic and physico-chemical phenomena has been largely overlooked. The activities of biota, from primary producers to predators, exert strong controls on fine sediment deposition, infiltration and resuspension. For example, extracellular polymeric substances (EPS) associated with biofilms increase deposition and decrease resuspension. In lower energy rivers, aquatic macrophyte growth and senescence are intimately linked to sediment retention and loss, whereas riparian trees are dominant ecosystem engineers in high energy systems. Fish and invertebrates also have profound effects on fine sediment dynamics through activities that drive both particle deposition and erosion depending on species composition and abiotic conditions. The functional traits of species present will determine not only these biotic effects but also the responses of river ecosystems to excess fine sediment. We discuss which traits are involved and put them into context with spatial processes that occur throughout the river network. Whilst strides towards better understanding of the impacts of excess fine sediment have been made, further progress to identify the most effective management approaches is urgently required through close communication between authorities and scientists.

Over the last decade, steady advancements have been made in the use of DNA-based methods for detection of species in a wide range of ecosystems. This progress has culminated in molecular monitoring methods being employed for the detection of several species for enforceable management purposes of endangered, invasive, and illegally harvested species worldwide. However, the routine application of DNA-based methods to monitor whole communities (typically a metabarcoding approach) in order to assess the status of ecosystems continues to be limited. In aquatic ecosystems, the limited use is particularly true for macroinvertebrate communities. As part of the DNAqua-Net consortium, a structured discussion was initiated with the aim to identify potential molecular methods for freshwater macroinvertebrate community assessment and identify important knowledge gaps for their routine application. We focus on three complementary DNA sources that can be metabarcoded: 1) DNA from homogenised samples (bulk DNA), 2) DNA extracted from sample preservative (fixative DNA), and 3) environmental DNA (eDNA) from water or sediment. We provide a brief overview of metabarcoding macroinvertebrate communities from each DNA source and identify challenges for their application to routine monitoring. To advance the utilisation of DNA-based monitoring for macroinvertebrates, we propose an experimental design template for a series of methodological calibration tests. The template compares sources of DNA with the goal of identifying the effects of molecular processing steps on precision and accuracy. Furthermore, the same samples will be morphologically analysed, which will enable the benchmarking of molecular to traditional processing approaches. In doing so we hope to highlight pathways for the development of DNA-based methods for the monitoring of freshwater macroinvertebrates.

Body mass–abundance (M‐N) allometries provide a key measure of community structure, and deviations from scaling predictions could reveal how cross‐ecosystem subsidies alter food webs. For 31 streams across the UK, we tested the hypothesis that linear log‐log M‐N scaling is shallower than that predicted by allometric scaling theory when top predators have access to allochthonous prey. These streams all contained a common and widespread top predator (brown trout) that regularly feeds on terrestrial prey and, as hypothesised, deviations from predicted scaling increased with its dominance of the fish assemblage. Our study identifies a key beneficiary of cross‐ecosystem subsidies at the top of stream food webs and elucidates how these inputs can reshape the size‐structure of these ‘open’ systems.

Small, 1st and 2nd-order, headwater streams and ponds play essential roles in providing natural flood control, trapping sediments and contaminants, retaining nutrients, and maintaining biological diversity, which extend into downstream reaches, lakes and estuaries. However, the large geographic extent and high connectivity of these small water bodies with the surrounding terrestrial ecosystem makes them particularly vulnerable to growing land-use pressures and environmental change. The greatest pressure on the physical processes in these waters has been their extension and modification for agricultural and forestry drainage, resulting in highly modified discharge and temperature regimes that have implications for flood and drought control further downstream. The extensive length of the small stream network exposes rivers to a wide range of inputs, including nutrients, pesticides, heavy metals, sediment and emerging contaminants. Small water bodies have also been affected by invasions of non-native species, which along with the physical and chemical pressures, have affected most groups of organisms with consequent implications for the wider biodiversity within the catchment. Reducing the impacts and restoring the natural ecosystem function of these water bodies requires a three-tiered approach based on: restoration of channel hydromorphological dynamics; restoration and management of the riparian zone; and management of activities in the wider catchment that have both point-source and diffuse impacts. Such activities are expensive and so emphasis must be placed on integrated programmes that provide multiple benefits. Practical options need to be promoted through legislative regulation, financial incentives, markets for resource services and voluntary codes and actions.

Body mass–abundance (M‐N) allometries provide a key measure of community structure, and deviations from scaling predictions could reveal how cross‐ecosystem subsidies alter food webs. For 31 streams across the UK, we tested the hypothesis that linear log‐log M‐N scaling is shallower than that predicted by allometric scaling theory when top predators have access to allochthonous prey. These streams all contained a common and widespread top predator (brown trout) that regularly feeds on terrestrial prey and, as hypothesised, deviations from predicted scaling increased with its dominance of the fish assemblage. Our study identifies a key beneficiary of cross‐ecosystem subsidies at the top of stream food webs and elucidates how these inputs can reshape the size‐structure of these ‘open’ systems.

Body mass–abundance (M‐N) allometries provide a key measure of community structure, and deviations from scaling predictions could reveal how cross‐ecosystem subsidies alter food webs. For 31 streams across the UK, we tested the hypothesis that linear log‐log M‐N scaling is shallower than that predicted by allometric scaling theory when top predators have access to allochthonous prey. These streams all contained a common and widespread top predator (brown trout) that regularly feeds on terrestrial prey and, as hypothesised, deviations from predicted scaling increased with its dominance of the fish assemblage. Our study identifies a key beneficiary of cross‐ecosystem subsidies at the top of stream food webs and elucidates how these inputs can reshape the size‐structure of these ‘open’ systems.

Body mass–abundance (M‐N) allometries provide a key measure of community structure, and deviations from scaling predictions could reveal how cross‐ecosystem subsidies alter food webs. For 31 streams across the UK, we tested the hypothesis that linear log‐log M‐N scaling is shallower than that predicted by allometric scaling theory when top predators have access to allochthonous prey. These streams all contained a common and widespread top predator (brown trout) that regularly feeds on terrestrial prey and, as hypothesised, deviations from predicted scaling increased with its dominance of the fish assemblage. Our study identifies a key beneficiary of cross‐ecosystem subsidies at the top of stream food webs and elucidates how these inputs can reshape the size‐structure of these ‘open’ systems.

Small, 1st and 2nd-order, headwater streams and ponds play essential roles in providing natural flood control, trapping sediments and contaminants, retaining nutrients, and maintaining biological diversity, which extend into downstream reaches, lakes and estuaries. However, the large geographic extent and high connectivity of these small water bodies with the surrounding terrestrial ecosystem makes them particularly vulnerable to growing land-use pressures and environmental change. The greatest pressure on the physical processes in these waters has been their extension and modification for agricultural and forestry drainage, resulting in highly modified discharge and temperature regimes that have implications for flood and drought control further downstream. The extensive length of the small stream network exposes rivers to a wide range of inputs, including nutrients, pesticides, heavy metals, sediment and emerging contaminants. Small water bodies have also been affected by invasions of non-native species, which along with the physical and chemical pressures, have affected most groups of organisms with consequent implications for the wider biodiversity within the catchment. Reducing the impacts and restoring the natural ecosystem function of these water bodies requires a three-tiered approach based on: restoration of channel hydromorphological dynamics; restoration and management of the riparian zone; and management of activities in the wider catchment that have both point-source and diffuse impacts. Such activities are expensive and so emphasis must be placed on integrated programmes that provide multiple benefits. Practical options need to be promoted through legislative regulation, financial incentives, markets for resource services and voluntary codes and actions.

Excessive delivery of fine sediments to water bodies has a detrimental impact on the biotic elements used for water body status classification. Although diatoms are typically used to assess stress from eutrophication, as fine sediment has the potential to impact diatoms in many ways, it is not surprising that an index based on benthic diatom assemblages has been proposed: the relative abundance of motile species. This measure is based on the fact that many raphid diatom species are capable of migrating through deposited sediment to avoid negative impacts. However, the use of such an index has yet to be fully tested. Various data analysis techniques were used to explore how indices based on diatom assemblages (related to eutrophication and siltation), diatom species, the traits motility, and nutrient affinity responded to a gradient of percentage cover of fine sediment. Although diatom species showed marked variation in their affinity for percentage cover of fine sediment, the relationship between motility (both percent motile and the trait motility) and deposited fine sediment is not sufficiently strong to be used as a reliable indicator of fine sediment stress. We present an approach, which could potentially be used to develop a new index (diatom indicator of sediment conditions) on the basis of the response of diatoms to fine sediment, but caution that this index requires further development before use. Despite the hydromorphology having considerable potential to affect benthic diatoms, existing indices designed to assess eutrophication were robust to hydromorphological modification, reducing the possibility of false diagnosis of impacts.

1. Improved water quality, through a reduction in diffuse pollution from agricultural sources, is an expected benefit of agri-environment schemes, but this has yet to be demonstrated in practice. Here, we evaluate the impact of Welsh agri-environment schemes on water quality and freshwater ecosystem condition through a combined monitoring and modelling framework. 2. To determine the influence of the agri-environment schemes on ecosystem condition, spatially independent catchments dominated by a single scheme (>40% of catchment) were compared to control catchments dominated (>70%) by agricultural land that was not part of any scheme. Biological indicators of water quality were monitored at the outfall of each catchment and a spatially explicit modelling framework of diffuse pollutant emissions applied to each of the 80 catchments. 3. Direct comparison (scheme/non-scheme) was unable to identify any significant effect of agrienvironment scheme participation. However, derived biological indicators that reflected organic pollution, eutrophication and pesticide run-off were strongly correlated with modelled concentrations of corresponding diffuse pollutants, thus providing a ground-truth for the models. Scenarios that assessed the correct counterfactuals (i.e. the influence of scheme entry on pollutant output) were developed for the whole of Wales. The models indicated an important effect of scheme entry on water quality, but this effect was not evenly distributed across the landscape. 4. Synthesis and applications. Our results indicate that agri-environment schemes can deliver improvements in water quality, through a reduction in diffuse pollution from agricultural sources. However, it is not easy to demonstrate scheme effectiveness; the combination of field survey and modelling used here provides a framework for addressing these difficulties. A spatially targeted approach for agri-environment scheme options to protect water resources from diffuse pollution is likely to

Excessive delivery of fine sediments to water bodies has a detrimental impact on the biotic elements used for water body status classification. Although diatoms are typically used to assess stress from eutrophication, as fine sediment has the potential to impact diatoms in many ways, it is not surprising that an index based on benthic diatom assemblages has been proposed: the relative abundance of motile species. This measure is based on the fact that many raphid diatom species are capable of migrating through deposited sediment to avoid negative impacts. However, the use of such an index has yet to be fully tested. Various data analysis techniques were used to explore how indices based on diatom assemblages (related to eutrophication and siltation), diatom species, the traits motility, and nutrient affinity responded to a gradient of percentage cover of fine sediment. Although diatom species showed marked variation in their affinity for percentage cover of fine sediment, the relationship between motility (both percent motile and the trait motility) and deposited fine sediment is not sufficiently strong to be used as a reliable indicator of fine sediment stress. We present an approach, which could potentially be used to develop a new index (diatom indicator of sediment conditions) on the basis of the response of diatoms to fine sediment, but caution that this index requires further development before use. Despite the hydromorphology having considerable potential to affect benthic diatoms, existing indices designed to assess eutrophication were robust to hydromorphological modification, reducing the possibility of false diagnosis of impacts.

1. Improved water quality, through a reduction in diffuse pollution from agricultural sources, is an expected benefit of agri-environment schemes, but this has yet to be demonstrated in practice. Here, we evaluate the impact of Welsh agri-environment schemes on water quality and freshwater ecosystem condition through a combined monitoring and modelling framework. 2. To determine the influence of the agri-environment schemes on ecosystem condition, spatially independent catchments dominated by a single scheme (>40% of catchment) were compared to control catchments dominated (>70%) by agricultural land that was not part of any scheme. Biological indicators of water quality were monitored at the outfall of each catchment and a spatially explicit modelling framework of diffuse pollutant emissions applied to each of the 80 catchments. 3. Direct comparison (scheme/non-scheme) was unable to identify any significant effect of agrienvironment scheme participation. However, derived biological indicators that reflected organic pollution, eutrophication and pesticide run-off were strongly correlated with modelled concentrations of corresponding diffuse pollutants, thus providing a ground-truth for the models. Scenarios that assessed the correct counterfactuals (i.e. the influence of scheme entry on pollutant output) were developed for the whole of Wales. The models indicated an important effect of scheme entry on water quality, but this effect was not evenly distributed across the landscape. 4. Synthesis and applications. Our results indicate that agri-environment schemes can deliver improvements in water quality, through a reduction in diffuse pollution from agricultural sources. However, it is not easy to demonstrate scheme effectiveness; the combination of field survey and modelling used here provides a framework for addressing these difficulties. A spatially targeted approach for agri-environment scheme options to protect water resources from diffuse pollution is likely to

1. Brown trout, Salmo trutta, exhibit one of the most highly variable and polytypic life-history strategies of all salmonids. Populations may be wholly freshwater-resident or almost exclusively migratory (anadromous), or fish of a single population may exhibit varying proportions of the two life-history strategies. Both anadromous and freshwater-resident trout freely interbreed to produce fertile offspring. 2. We quantify maternal reproductive provisioning by anadromous and freshwater-resident brown trout to their offspring and assess relative parental fitness (in terms of number, size and time of emergence of offspring). Newly emerged juvenile trout (fry) were sampled (n = 119) over the emergence period in March–April 2007 in a lowland English chalk stream; samples of adult trout [anadromous (6F : 12M) and freshwater-resident (22F : 56M)], river-resident trout parr and macroinvertebrate prey were also collected. 3. Using a novel combination of stable isotope analysis and microsatellite genotyping we demonstrate the overwhelming contribution of anadromous parents (both female and male) to fry production, despite the obvious presence and numerical dominance of resident adults. We unambiguously identify the maternal origins of 78% of juveniles sampled and show that maternal reproductive contribution to juvenile production in the river was higher for anadromous females (76%) than freshwater-resident fish (2.5%). Offspring of anadromous females emerged earlier and at a larger body size than offspring of resident females. Similarly, while the relative contribution of resident males (37%) was higher than that of resident females, anadromous males sired considerably more offspring (63%) than resident males. This is the first study of its kind to accurately assess the reproductive contribution of anadromous male trout. 4. Overall, this study suggests that anadromous maternal traits provide offspring with an adaptive advantage and greater fitness in early ontogeny, and that

1. Brown trout, Salmo trutta, exhibit one of the most highly variable and polytypic life-history strategies of all salmonids. Populations may be wholly freshwater-resident or almost exclusively migratory (anadromous), or fish of a single population may exhibit varying proportions of the two life-history strategies. Both anadromous and freshwater-resident trout freely interbreed to produce fertile offspring. 2. We quantify maternal reproductive provisioning by anadromous and freshwater-resident brown trout to their offspring and assess relative parental fitness (in terms of number, size and time of emergence of offspring). Newly emerged juvenile trout (fry) were sampled (n = 119) over the emergence period in March–April 2007 in a lowland English chalk stream; samples of adult trout [anadromous (6F : 12M) and freshwater-resident (22F : 56M)], river-resident trout parr and macroinvertebrate prey were also collected. 3. Using a novel combination of stable isotope analysis and microsatellite genotyping we demonstrate the overwhelming contribution of anadromous parents (both female and male) to fry production, despite the obvious presence and numerical dominance of resident adults. We unambiguously identify the maternal origins of 78% of juveniles sampled and show that maternal reproductive contribution to juvenile production in the river was higher for anadromous females (76%) than freshwater-resident fish (2.5%). Offspring of anadromous females emerged earlier and at a larger body size than offspring of resident females. Similarly, while the relative contribution of resident males (37%) was higher than that of resident females, anadromous males sired considerably more offspring (63%) than resident males. This is the first study of its kind to accurately assess the reproductive contribution of anadromous male trout. 4. Overall, this study suggests that anadromous maternal traits provide offspring with an adaptive advantage and greater fitness in early ontogeny, and that

1. Detrimental impacts of excessive fine-grained sediment inputs to streams and rivers are well established. What is less well understood is the susceptibility of different elements of the freshwater biota to such perturbations and how such knowledge of their susceptibility could aid in identifying where excessive fine-grained sediment is impairing ecological condition. 2. Following the collection of biological and sediment data from 179 streams across England and Wales, representative of a range of river types over a gradient of fine sediment loading, objective statistical approaches were applied to establish relationships between the macroinvertebrate assemblage and fine-grained sediment inputs to river channels. 3. Having factored out that portion of the biological variation associated with natural environmental gradients, a model comprising mass of organic sediment in erosional areas of the stream bed [predominantly associated with the first axis of the partial canonical correspondence analysis (pCCA)], and mass of fine-grained sediment in the surface drape of depositional areas and % organic content in erosional areas (associated with the second axis of the pCCA) as explanatory variables best accounted for the residual variation in the macroinvertebrate assemblage. 4. The relative position of taxa along both axes of the pCCA, provided a ranking of taxa in relation to the two gradients of fine-grained sediment and provided the basis for a new empirically derived diagnostic index for fine-grained sediment stress in rivers. Two sub-indices were derived to capture the assemblage responses to both the gradient of organic sediment in erosional areas and the gradient of total fines in depositional areas. The two sub-indices were then combined to derive the new combined fine sediment index (CoFSIsp). 5. The index was tested on an independent test data set (comprising 127 samples from 83 sites) and was found to provide a robust indication of benthic fine-grained sedimen

1. Detrimental impacts of excessive fine-grained sediment inputs to streams and rivers are well established. What is less well understood is the susceptibility of different elements of the freshwater biota to such perturbations and how such knowledge of their susceptibility could aid in identifying where excessive fine-grained sediment is impairing ecological condition. 2. Following the collection of biological and sediment data from 179 streams across England and Wales, representative of a range of river types over a gradient of fine sediment loading, objective statistical approaches were applied to establish relationships between the macroinvertebrate assemblage and fine-grained sediment inputs to river channels. 3. Having factored out that portion of the biological variation associated with natural environmental gradients, a model comprising mass of organic sediment in erosional areas of the stream bed [predominantly associated with the first axis of the partial canonical correspondence analysis (pCCA)], and mass of fine-grained sediment in the surface drape of depositional areas and % organic content in erosional areas (associated with the second axis of the pCCA) as explanatory variables best accounted for the residual variation in the macroinvertebrate assemblage. 4. The relative position of taxa along both axes of the pCCA, provided a ranking of taxa in relation to the two gradients of fine-grained sediment and provided the basis for a new empirically derived diagnostic index for fine-grained sediment stress in rivers. Two sub-indices were derived to capture the assemblage responses to both the gradient of organic sediment in erosional areas and the gradient of total fines in depositional areas. The two sub-indices were then combined to derive the new combined fine sediment index (CoFSIsp). 5. The index was tested on an independent test data set (comprising 127 samples from 83 sites) and was found to provide a robust indication of benthic fine-grained sedimen

1. Imbalances between the supply of elements from resources and their demand from consumers may constrain key ecological processes, such as growth and production. Most previous studies have estimated such stoichiometric imbalances between consumers and resources by inferring the diet of the former from functional classifications rather than by direct assessments of the diet. However, this does not allow for potentially plastic responses of consumers to a restricted supply of elemental resources. 2. Here, for three streams of very contrasting nutrient availability, we calculated elemental imbalances between consumers and resources using diets derived from empirical gut contents analysis and compared them with those inferred for the functional feeding guilds of the species concerned. 3. In almost every case, elemental imbalances (C:P and N:P) based on the realised diet differed significantly from those expected from the inferred diet, the former revealing greater alignment between the elemental composition of consumers and their resources, particularly for P. 4. Simply inferring the diet, as is commonly done, results in erroneous estimates of elemental imbalances and misleading conclusions about stoichiometric constraints on consumers

1. Imbalances between the supply of elements from resources and their demand from consumers may constrain key ecological processes, such as growth and production. Most previous studies have estimated such stoichiometric imbalances between consumers and resources by inferring the diet of the former from functional classifications rather than by direct assessments of the diet. However, this does not allow for potentially plastic responses of consumers to a restricted supply of elemental resources. 2. Here, for three streams of very contrasting nutrient availability, we calculated elemental imbalances between consumers and resources using diets derived from empirical gut contents analysis and compared them with those inferred for the functional feeding guilds of the species concerned. 3. In almost every case, elemental imbalances (C:P and N:P) based on the realised diet differed significantly from those expected from the inferred diet, the former revealing greater alignment between the elemental composition of consumers and their resources, particularly for P. 4. Simply inferring the diet, as is commonly done, results in erroneous estimates of elemental imbalances and misleading conclusions about stoichiometric constraints on consumers

There is an acknowledged need among stakeholders that new hydromorphological metrics are required to facilitate site remediation and for reporting at national and European levels. Pressure/ impact data were assembled from across Europe. The task was challenging, but useful information was gathered. For each major hydromorphological pressure, the physical response gradients of rivers was summarised as diagnostic diagrams. For the first time we provide evidence that metrics indicating HYMO impact could be developed from monitoring data on fish and macrophytes. For the first time we demonstrate the potential to derive metrics sensitive to fine sediment. We provide evidence that phytobenthos (diatoms), invertebrates and macrophytes have the potential to be used in combined metrics. We found that many existing macroinvertebrate metrics lack specificity and can provide false positive responses to HYMO pressure, suggesting that disentanglement of multi-stressor responses is critical to good diagnosis. There is evidence that aquatic habitats protected under the Habitats Directive will be increasingly vulnerable to hydrological pressures with the changing climate. Frequently, overlooked topics such as sediment quality and groundwater issues ought to supplement or be included in HYMO assessments due to their potential for explaining variance in biological datasets. Land-use data on a spatial scale beyond the reach scale (corridor and catchment) relates to site-specific macroinvertebrate metrics and could be a more robust way of assessing impacts.

There is an acknowledged need among stakeholders that new hydromorphological metrics are required to facilitate site remediation and for reporting at national and European levels. Pressure/ impact data were assembled from across Europe. The task was challenging, but useful information was gathered. For each major hydromorphological pressure, the physical response gradients of rivers was summarised as diagnostic diagrams. For the first time we provide evidence that metrics indicating HYMO impact could be developed from monitoring data on fish and macrophytes. For the first time we demonstrate the potential to derive metrics sensitive to fine sediment. We provide evidence that phytobenthos (diatoms), invertebrates and macrophytes have the potential to be used in combined metrics. We found that many existing macroinvertebrate metrics lack specificity and can provide false positive responses to HYMO pressure, suggesting that disentanglement of multi-stressor responses is critical to good diagnosis. There is evidence that aquatic habitats protected under the Habitats Directive will be increasingly vulnerable to hydrological pressures with the changing climate. Frequently, overlooked topics such as sediment quality and groundwater issues ought to supplement or be included in HYMO assessments due to their potential for explaining variance in biological datasets. Land-use data on a spatial scale beyond the reach scale (corridor and catchment) relates to site-specific macroinvertebrate metrics and could be a more robust way of assessing impacts.

Methane (CH(4)) and carbon dioxide (CO(2)) are the dominant gaseous end products of the remineralization of organic carbon and also the two largest contributors to the anthropogenic greenhouse effect. We investigated whether warming altered the balance of CH(4) efflux relative to gross primary production (GPP) and ecosystem respiration (ER) in a freshwater mesocosm experiment. Whole ecosystem CH(4) efflux was strongly related to temperature with an apparent activation energy of 0.85 eV. Furthermore, CH(4) efflux increased faster than ER or GPP with temperature, with all three processes having sequentially lower activation energies. Warming of 4 degrees C increased the fraction of GPP effluxing as CH(4) by 20% and the fraction of ER as CH(4) by 9%, in line with the offset in their respective activation energies. Because CH(4) is 21 times more potent as a greenhouse gas, relative to CO(2), these results suggest freshwater ecosystems could drive a previously unknown positive feedback between warming and the carbon cycle.

Here, we investigate patterns in the size structure of one marine and six freshwater foodwebs: that is, how the trophic structure of such ecological networks is governed by the body size of its interacting entities. The data for these food webs are interactions between individuals, including the taxonomic identity and body mass of the prey and the predator. Using these detailed data, we describe how patterns grouped into three sets of response variables: (i) trophic orderings; (ii) diet variation; and (iii) predator variation, scales with the body mass of predators or prey, using both a species- and a size-class-based approach. We also compare patterns of size structure derived from analysis of individual-based data with those patterns that result when data are ‘‘aggregated’’ into species (or size class-based) averages.This comparison shows that analysis based on species averaging can obscure interesting patterns in the size structure of ecological communities. Specifically, we found that the slope of prey body mass as a function of predator body mass was consistently underestimated and the slope of predator–prey bodymass ratio (PPMR) as a function of predator bodymass was overestimated, when species averages were used instead of the individuallevel data. In some cases, no relationship was found when species averageswere used, but when individual-level data were used instead, clear and significant patterns were revealed. Further, when data were grouped into size classes, the slope of the prey bodymass as a function of predator bodymasswas smaller and the slope of the PPMR relationship was greater compared to what was found using species-aggregated data.Wealso discuss potential sampling effects arising from size-class-based approaches, which are not always seen in taxonomical approaches. These results have potentially important implications for parameterisation of models of ecological communities and hence for predictions concerning the dynamics of ecological communi

Methane (CH(4)) and carbon dioxide (CO(2)) are the dominant gaseous end products of the remineralization of organic carbon and also the two largest contributors to the anthropogenic greenhouse effect. We investigated whether warming altered the balance of CH(4) efflux relative to gross primary production (GPP) and ecosystem respiration (ER) in a freshwater mesocosm experiment. Whole ecosystem CH(4) efflux was strongly related to temperature with an apparent activation energy of 0.85 eV. Furthermore, CH(4) efflux increased faster than ER or GPP with temperature, with all three processes having sequentially lower activation energies. Warming of 4 degrees C increased the fraction of GPP effluxing as CH(4) by 20% and the fraction of ER as CH(4) by 9%, in line with the offset in their respective activation energies. Because CH(4) is 21 times more potent as a greenhouse gas, relative to CO(2), these results suggest freshwater ecosystems could drive a previously unknown positive feedback between warming and the carbon cycle.

Here, we investigate patterns in the size structure of one marine and six freshwater foodwebs: that is, how the trophic structure of such ecological networks is governed by the body size of its interacting entities. The data for these food webs are interactions between individuals, including the taxonomic identity and body mass of the prey and the predator. Using these detailed data, we describe how patterns grouped into three sets of response variables: (i) trophic orderings; (ii) diet variation; and (iii) predator variation, scales with the body mass of predators or prey, using both a species- and a size-class-based approach. We also compare patterns of size structure derived from analysis of individual-based data with those patterns that result when data are ‘‘aggregated’’ into species (or size class-based) averages.This comparison shows that analysis based on species averaging can obscure interesting patterns in the size structure of ecological communities. Specifically, we found that the slope of prey body mass as a function of predator body mass was consistently underestimated and the slope of predator–prey bodymass ratio (PPMR) as a function of predator bodymass was overestimated, when species averages were used instead of the individuallevel data. In some cases, no relationship was found when species averageswere used, but when individual-level data were used instead, clear and significant patterns were revealed. Further, when data were grouped into size classes, the slope of the prey bodymass as a function of predator bodymasswas smaller and the slope of the PPMR relationship was greater compared to what was found using species-aggregated data.Wealso discuss potential sampling effects arising from size-class-based approaches, which are not always seen in taxonomical approaches. These results have potentially important implications for parameterisation of models of ecological communities and hence for predictions concerning the dynamics of ecological communi

Methane (CH4) and carbon dioxide (CO2) are the dominant gaseous end products of the remineralization of organic carbon and also the two largest contributors to the anthropogenic greenhouse effect. We investigated whether warming altered the balance of CH4 efflux relative to gross primary production (GPP) and ecosystem respiration (ER) in a freshwater mesocosm experiment. Whole ecosystem CH4 efflux was strongly related to temperature with an apparent activation energy of 0.85 eV. Furthermore, CH4 efflux increased faster than ER or GPP with temperature, with all three processes having sequentially lower activation energies. Warming of 4 °C increased the fraction of GPP effluxing as CH4 by 20% and the fraction of ER as CH4 by 9%, in line with the offset in their respective activation energies. Because CH4 is 21 times more potent as a greenhouse gas, relative to CO2, these results suggest freshwater ecosystems could drive a previously unknown positive feedback between warming and the carbon cycle

1. The scale of investigations influences the interpretation of results. Here, we investigate the influence of fish and nutrients on biotic communities in shallow lakes, using studies at two different scales: (i) within-lake experimental manipulation and (ii) comparative, among-lake relationships. 2. At both scales, fish predation had an overriding influence on macroinvertebrates; fish reduced macroinvertebrate biomass and altered community composition. Prey selection appeared to be size based. Fish influenced zooplankton abundance and light penetration through the water column also, but there was no indication that fish caused increased resuspension of sediment. 3. There were effects of nutrients at both scales, but these effects differed with the scale of the investigation. Nutrients increased phytoplankton and periphyton at the within-lake scale, and were associated with increased periphyton at the among-lake scale. No significant effect of nutrients on macroinvertebrates was observed at the within-lake scale. However, at the among-lake scale, nutrients positively influenced the biomass and density of macroinvertebrates, and ameliorated the effect of fish on macroinvertebrates. 4. Increased prey availability at higher nutrient concentrations would be expected to cause changes in the fish community. However, at the among-lake scale, differences were not apparent in fish biomass among lakes with different nutrient conditions, suggesting that stochastic events influence the fish community in these small and relatively isolated shallow lakes. 5. The intensity of predation by fish significantly influences macroinvertebrate community structure of shallow lakes, but nutrients also play a role. The scale of investigation influences the ability to detect the influence of nutrients on the different components of shallow lake communities, particularly for longer lived organisms such as macroinvertebrates, where the response takes longer to manifest.

The study of food webs has been a central theme within ecology for decades, and their structure and dynamics have been used to assess a range of key properties of communities (e.g. complexity–stability relationships) and ecosystems (e.g. fluxes of energy and nutrients). However, many food web parameters are sensitive to sampling effort, which is rarely considered, and further, most studies have used either species- or size-averaged data for both nodes and links, rather than individual-based data, which is the level of organisation at which trophic interactions occur. This practice of aggregating data hides a considerable amount of biologically meaningful variation and could, together with potential sampling effects, create methodological artefacts. New individual-based approaches could improve our understanding of, and ability to predict, food web structure and dynamics, particularly if they are derived from simple metabolic and foraging constraints. We explored the effect of species-averaging in four highly-resolved individual-based aquatic food webs (Broadstone Stream, the Afon Hirnant, Tadnoll Brook and the Celtic Sea) and found that it obscured structural regularities resulting from intraspecific size variation. The individual-based approach provided clearer insights into seasonal and ontogenetic shifts, highlighting the importance of the temporal component of size-structuring in ecological networks. An extension of the Allometric Diet Breadth Model predicted the structure of the empirical food webs almost twice as accurately as the equivalent species-based webs, with the best-fitting model predicting 83% of the links correctly in the Broadstone Stream size-based web, and the few mismatches between the model and data were explained largely by sampling effects. Our results highlight the need for theoretical explanations to correspond closely with methods of data collection and aggregation, which is the exception rather than the rule at present. We suggest how thi

1. Shallow lakes are often cited as classic examples of systems that exhibit trophic cascades but, whilst they provide good model systems with which to test general ecological theory and to assess long-term community change, their food web linkages have rarely been resolved. 2. We sought to redress this, and to demonstrate the potential benefits of integrating palaeolimnological and contemporary data, by constructing highly resolved food webs for the extant communities of two shallow U.K. lakes from different positions along a gradient of eutrophication. The surface sediment cladoceran and submerged macrophyte assemblages in the less enriched site, Selbrigg Pond, matched the palaeolimnological assemblages of the more enriched site, Felbrigg Hall Lake, in the 1920s. Thus, Selbrigg was a temporal analogue for Felbrigg, from which the consequences of long-term eutrophication on food web structure could be inferred. These data represent the first steps towards reconstructing not just past assemblages (i.e. nodes within a food web), but also past interactions (i.e. links within a food web): a significant departure from much of the previous research in palaeolimnology. 3. We found that, in line with theoretical predictions, the structure of the food web changed in the latter stages of eutrophication. Not only were species lost, but so were the interconnections between them, so that the network collapsed into a simpler, less reticulate state. This structural change, which was associated with a greater channelling of energy through a smaller number of nodes as alternative feeding pathways disappear, could lead to reduced dynamic stability, pushing the network towards further simplification. Our data suggested that these changes were linked to reductions in the spatial extent of submerged vegetation and a shift from a benthic towards a more pelagic-dominated system, as the plant-associated subweb eroded over time. 4. Although these data are among the first of their kind, the

The carbon cycle modulates climate change, via the regulation of atmospheric CO2. and it represents one of the most important services provided by ecosystems. However considerable uncertainties remain concerning potential feedbacks between the biota and the climate. In particular, it is unclear how global warming will affect the metabolic balance between the photosynthetic fixation and respiratory release of CO2 at the ecosystem scale. Here we present a combination of experimental field data from freshwater mesocosms, and theoretical predictions derived from the metabolic theory of ecology to investigate whether warming will alter the capacity of ecosystems to absorb CO2. Our manipulative experiment simulated the temperature increases predicted for the end of the century and revealed that ecosystem respiration increased at a faster rate than primary production, reducing carbon sequestration by 13%. These results confirmed our theoretical predictions based on the differential activation energies of these two processes. Using only the activation energies for whole ecosystem photosynthesis and respiration we provide a theoretical prediction that accurately quantified the precise magnitude of the reduction in carbon sequestration observed experimentally. We suggest the combination of whole-ecosystem manipulative experiments and ecological theory is one of the most promising and fruitful research areas to predict the impacts of climate change on key ecosystem services.