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BackgroundB lymphocytes have multifaceted functions in the tumour microenvironment, and their prognostic role in human cancers is controversial. Here we aimed to identify tumour microenvironmental factors that influence the prognostic effects of B cells.MethodsWe conducted a gene expression analysis of 3585 patients for whom the clinical outcome information was available. We further investigated the clinical relevance for predicting immunotherapy response.ResultsWe identified a novel B cell-related gene (BCR) signature consisting of nine cytokine signalling genes whose high expression could diminish the beneficial impact of B cells on patient prognosis. In triple-negative breast cancer, higher B cell abundance was associated with favourable survival only when the BCR signature was low (HR = 0.68, p = 0.0046). By contrast, B cell abundance had no impact on prognosis when the BCR signature was high (HR = 0.93, p = 0.80). This pattern was consistently observed across multiple cancer types including lung, colorectal, and melanoma. Further, the BCR signature predicted response to immune checkpoint blockade in metastatic melanoma and compared favourably with the established markers.ConclusionsThe prognostic impact of tumour-infiltrating B cells depends on the status of cytokine signalling genes, which together could predict response to cancer immunotherapy.

While the past decade has seen meaningful improvements in clinical outcomes for multiple myeloma patients, a subset of patients does not benefit from current therapeutics for unclear reasons. Many gene expression-based models of risk have been developed, but each model uses a different combination of genes and often involves assaying many genes making them difficult to implement. We organized the Multiple Myeloma DREAM Challenge, a crowdsourced effort to develop models of rapid progression in newly diagnosed myeloma patients and to benchmark these against previously published models. This effort lead to more robust predictors and found that incorporating specific demographic and clinical features improved gene expression-based models of high risk. Furthermore, post-challenge analysis identified a novel expression-based risk marker, PHF19, which has recently been found to have an important biological role in multiple myeloma. Lastly, we show that a simple four feature predictor composed of age, ISS, and expression of PHF19 and MMSET performs similarly to more complex models with many more gene expression features included.

Fine particulate (PM2.5) is a severe problem of air pollution in the world. Although many studies were performed on examining effects of PM2.5 on human health, the understanding of PM2.5 influence on aquatic organisms is limited. Due to wet deposition, the pollutants in PM2.5 can enter aquatic ecosystems and affect aquatic organisms. This study tested the hypothesis that PM2.5 will negatively affect the behavior of freshwater snail Parafossarulus striatulus (Benson, 1842). Along with PM2.5, a number of components (Al, Pb, and Zn) that are commonly present in PM2.5 were also tested for their effects on the snail's behavior. The snail behavior was scored using the Behavioral State Score (BSS), ranging from 0 (no movement) to 5 (active locomotion and fully extended body). The result shows that high PM2.5 concentration dose (7.75 mg/L) induced a significant decrease in snails' movement behavior, and such reduced movement. The same behavior was also observed for treatments with chemical components related to PM2.5, including aluminum and acidity (pH 5.0). In contrast, a low concentration of PM2.5 (3.88 mg/L), lead, and zinc did not significantly affect snails' behavior. The results suggest that high PM2.5 deposition in water bodies, associated with acidification and some metals, can have an adverse effect on aquatic organisms.

Fine particulate (PM2.5) is a severe problem of air pollution in the world. Although many studies were performed on examining effects of PM2.5 on human health, the understanding of PM2.5 influence on aquatic organisms is limited. Due to wet deposition, the pollutants in PM2.5 can enter aquatic ecosystems and affect aquatic organisms. This study tested the hypothesis that PM2.5 will negatively affect the behavior of freshwater snail Parafossarulus striatulus (Benson, 1842). Along with PM2.5, a number of components (Al, Pb, and Zn) that are commonly present in PM2.5 were also tested for their effects on the snail's behavior. The snail behavior was scored using the Behavioral State Score (BSS), ranging from 0 (no movement) to 5 (active locomotion and fully extended body). The result shows that high PM2.5 concentration dose (7.75 mg/L) induced a significant decrease in snails' movement behavior, and such reduced movement. The same behavior was also observed for treatments with chemical components related to PM2.5, including aluminum and acidity (pH 5.0). In contrast, a low concentration of PM2.5 (3.88 mg/L), lead, and zinc did not significantly affect snails' behavior. The results suggest that high PM2.5 deposition in water bodies, associated with acidification and some metals, can have an adverse effect on aquatic organisms.

Fine particulate (PM2.5) is a severe problem of air pollution in the world. Although many studies were performed on examining effects of PM2.5 on human health, the understanding of PM2.5 influence on aquatic organisms is limited. Due to wet deposition, the pollutants in PM2.5 can enter aquatic ecosystems and affect aquatic organisms. This study tested the hypothesis that PM2.5 will negatively affect the behavior of freshwater snail Parafossarulus striatulus (Benson, 1842). Along with PM2.5, a number of components (Al, Pb, and Zn) that are commonly present in PM2.5 were also tested for their effects on the snail's behavior. The snail behavior was scored using the Behavioral State Score (BSS), ranging from 0 (no movement) to 5 (active locomotion and fully extended body). The result shows that high PM2.5 concentration dose (7.75 mg/L) induced a significant decrease in snails' movement behavior, and such reduced movement. The same behavior was also observed for treatments with chemical components related to PM2.5, including aluminum and acidity (pH 5.0). In contrast, a low concentration of PM2.5 (3.88 mg/L), lead, and zinc did not significantly affect snails' behavior. The results suggest that high PM2.5 deposition in water bodies, associated with acidification and some metals, can have an adverse effect on aquatic organisms.