1. Characterisation of insecticide resistance in Anopheles gambiae s.l. from Burkina Faso to accelerate the evaluation of vector control tools
- Author
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Williams, Jessica
- Abstract
Insecticides formulated into products that target Anopheles mosquitos have led to a substantial decline in malaria cases this century in Africa, however resistance to currently used insecticides is spreading quickly and there is an urgent need for alternative public health insecticides. Burkina Faso has one of the highest burdens of malaria globally and is a hotspot for the evolution of insecticide resistance in species of the Anopheles gambiae complex. Novel resistance mutations are emerging and spreading in malaria vectors through positive selection from insecticide use. Screening for prospective new insecticides requires access to stable colonies of the predominant vector species that contain both known and novel resistance mechanisms circulating in wild populations. The contribution of novel mechanisms to the resistant phenotype must be assessed, and monitoring for the presence and frequency of these in field populations is required to inform resistant management programmes. Several highly pyrethroid resistant populations were collected from Southwest Burkina Faso and established as stable laboratory strains at LSTM. The phenotype of these strains was fully characterised, and genotyping of resistance conferring SNPs was conducted, along with a comprehensive assessment of the transcriptome. The established strains were investigated for the presence of novel mutations in the target site of pyrethroid insecticides, the voltage gated sodium channel (known as kdr mutations) and for the presence of copy number variation (CNVs) in insecticide detoxification genes. An assessment of the contribution of different kdr haplotypes, 995F and 1527T-402L, to pyrethroid resistance was made using WHO tube and cone bioassays. To identify if resistance mechanisms respond differentially to selection with different pyrethroids, the Tiefora strain was divided into two sub-colonies and subjected to intense selection pressure with either permethrin or deltamethrin, and a review of the resulting resistance mechanisms was conducted. Pyrethroid selection pressure maintained resistance to this class in all of the resistant strains. RNAseq identified many resistance mechanisms, some found across strains, others unique to a particular species, with elevation of P450s Cyp6p3 and Cyp6z2 present in all 5 strains. Transcriptome analysis and tarsal contact data highlighted some less well researched mechanisms including penetration barriers and sequestration of toxins in several strains. Synergism assays found that piperonyl butoxide (PBO) exposure was unable to fully restore susceptibility, although exposure to a commercial insecticide treated net containing PBO resulted in 100% mortality in all 5 strains. CNVs were present in the 5 resistant strains with a significant association between Cyp6aap_Dup7 and deltamethrin survival detected in the Tiefora strain. Cyp6aa1_Dup7 duplication also led to a significant increase in the expression of Cyp6aa1. Three new diagnostic assays were designed and used to screen for novel kdr SNPs P1874S/L, V402L and 1527T in laboratory strains and field populations. All colonies contained kdr resistant alleles but with differing proportions of alternative resistant haplotypes. The V402L-I1527T haplotype was found at frequencies higher than previously reported. Selection with both deltamethrin and permethrin resulted in a significant increase in the frequency of the 995F allele (with a concurrent decrease in 1527T). RNAseq analysis revealed the transcriptomes of the two differentially selected lines to be very similar after 4 rounds of selections, with just 32 genes differentially expressed between them. Whilst many resistance mechanisms are shared between species, there are some important differences which may affect resistance to current and future insecticide classes. The complexity, and diversity of resistance mechanisms highlights the value of screening any potential new insecticide intended for use in malaria control against a wide range of populations. These stable laboratory colonies provide a valuable resource for insecticide discovery, and for further studies on the evolution, and dispersal of insecticide resistance within and between species.
- Published
- 2022
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