17 results on '"Bonierbale M"'
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2. A Case for Crop Wild Relative Preservation and Use in Potato
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Jansky, S. H., Dempewolf, H., Camadro, E. L., Simon, R., Zimnoch‐Guzowska, E., Bisognin, D. A., and Bonierbale, M.
- Abstract
Crop wild relatives (CWR) offer a critical resource to address food security needs by providing genetic diversity for crop improvement, leading to increased plasticity and productivity of farming systems. However, plant breeders typically have not developed systematic or comprehensive strategies for the characterization and use of CWR for cultivar improvement. Potato (Solanum tuberosumL.) provides an excellent case study for the use of CWR germplasm in addressing global food security needs. International cooperation and collaboration are critical to collect, characterize, and use CWR in anticipation of future production needs. Both ex situ and in situ preservation of wild potato species are essential to assure a comprehensive conservation plan. Top priorities include a coordinated inventory of gene bank holdings followed by re‐collection of CWR and new collection where gaps exist. Access to CWR genetic diversity will continue to be critical as breeders face the challenge of developing cultivars that fit into new production systems, especially in response to climate change. With the advent of the genomics era, new visions of germplasm use strategies are emerging. In addition to filling gaps in collections, it will be important to expand efforts to characterize and use potato CWR. A systematic and integrated strategy is needed to evaluate CWR in gene banks for traits to continue breeding progress.
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- 2013
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3. Large-Scale Evaluation of Potato Improved Varieties, Genetic Stocks and Landraces for Drought Tolerance
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Cabello, R., De Mendiburu, F., Bonierbale, M., Monneveux, P., Roca, W., and Chujoy, E.
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Abstract: Potato production worldwide is strongly affected by water stress, either because of insufficient rainfall or due to inadequate irrigation. Improving drought tolerance is consequently becoming a priority for potato breeders, particularly in the perspective of climate change. In the present study, a set of 918 accessions from CIP world potato collection was evaluated under field conditions with full irrigation and deficit irrigation, on the desertic coast of Peru. The set included improved varieties, genetic stocks and landraces. The subset of landraces comprised accessions from the species Solanum ajanhuiri Juz. & Bukasov, Solanum curtilobum Juz. & Bukasov, Solanum juzepczukii Bukasov and Solanum tuberosum L. S. tuberosum L. included non Andean accessions of the ssp. Chilotanum as well as accessions belonging to the Andean cultivar groups Andigenum, Chaucha, Goniocalyx, Phureja and Stenotomum. Under both drought and irrigated treatments, significant differences were found for tuber yield, tuber number and tuber weight among subsets, cultivar groups and accessions. On average, improved varieties and advanced bred lines yielded more under both deficit and well-irrigated conditions than did landraces, while variation for drought susceptibility was greater in landraces and genetic stocks than in improved varieties. Within the subset of landraces, the species Solanum juzepczukii Bukasov exhibited the lowest average values and highest variation for drought susceptibility. A high proportion of accessions combining low drought susceptibility and high irrigated yield were found in Andean landraces, and particularly in the species Solanum curtilobum Juz. & Bukasov in the S. tuberosum L. cultivar groups Stenotomum, Andigenum and Chaucha. The differences observed among species and cultivar groups were not directly related to their eco-geographic distribution. The polyploid species and cultivars groups appeared more drought tolerant than the diploid ones. The study evidenced the interest of Andean landraces as potential sources of drought tolerance in potato breeding programs.
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- 2012
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4. High Levels of Heritable Resistance to Potato Leafroll Virus(PLRV) in Solanum tuberosumsubsp. andigena
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Mihovilovich, E., Alarcón, L., Pérez, A. L., Alvarado, J., Arellano, C., and Bonierbale, M.
- Abstract
Phenotypic characterization and genetic studies were performed to provide fundamental information for the exploitation of the native cultivated potato species Solanum tuberosumsubsp. andigena(Juz. and Bukasov.) Hawkes (andigena) as a source of resistance to Potato leafroll virus(PLRV). Analysis of a diallel mating design among andigenacultivars revealed the importance of additive gene effects. Phenotypic assessment of components of PLRV resistance showed that andigenacultivars with high levels of resistance to infection were also resistant to the accumulation of PLRV and able to restrict translocation of the virus to their tubers. Three andigenacultivars (LOP‐868, HUA‐332, and OCH‐7643) identified with these features also showed high positive general combining ability (GCA) for PLRV resistance. High frequencies of individuals in progenies from crosses between these cultivars and both resistant and susceptible commercial varieties were also resistant. No interaction in the expression of resistance from andigenain tuberosumbackgrounds was observed indicating that breeding advances for this trait should proceed well using this new resistance source. Our results support the previous hypothesis that multiple components of resistance in a single genotype could be the result of a common mechanism controlled by several genes. The remarkably high frequency (>70%) of uninfected individuals in all progenies derived from the highly resistant andigenacultivar LOP‐868 and the occurrence of highly resistant clones selected from this parent suggest the presence of an allele with large effects.
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- 2007
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5. Genome mapping in cassava improvement: Challenges, achievements and opportunities
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Fregene, M., Okogbenin, E., Mba, C., Angel, F., Suarez, Maria, Janneth, Guitierez, Chavarriaga, P., Roca, W., Bonierbale, M., and Tohme, J.
- Abstract
Breeding goals of yield increases, root quality improvement, and disease resistance in cassava are considerably slowed down by biological characteristics of the crop, which includes a long growth cycle, a heterozygous genetic background and a poor knowledge of the organization of crop diversity. These factors severely hamper the speed and ease of moving around useful genes in cassava. The consequences are that cassava production fails to keep up with demand, especially in regions where over90% of yield is consumed as food, leading to an increase in acreage of cassava fields mostly into marginal lands. The advent of molecular markers,genome studies and plant genetic transformation holds promise of providing ways around breeding obstacles in long growth cycle and heterozygous crops. A number of these new tools, including a molecular genetic map, markers linked to disease resistance genes, and marker-aided studies of complex traits now exist or are being developed for cassava at CIAT. Large scale sequencing and mapping of expressed sequence tags(ESTs) have been initiated, towards a transcript map of cassava and the implementation of the candidate-gene approach to complex trait mapping. A cassava bacterial artificial chromosome (BAC) library has also been constructed to expedite positional cloning of genes, known only by their phenotypes and their position relative to markers on a molecular genetic map and complementation studies of candidate loci. Studies of genes that control traits of agronomic importance, and their allelic diversity in nature,provides powerful tools for understanding the basis of crop performance and improvement.
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- 2001
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6. QTL mapping of foliar glycoalkaloid aglycones in Solanum tuberosum×S. berthaultii potato progenies: quantitative variation and plant secondary metabolism
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Yencho, G. C., Kowalski, S. P., Kobayashi, R. S., Sinden, S. L., Bonierbale, M. W., and Deahl, K. L.
- Abstract
Abstract: Glycoalkaloids are quantitatively inherited in Solanum, and in high concentrations they can be toxic to humans. The increased use of wild potato germplasm to improve the pest resistance, yield, and quality characteristics of cultivated potato may elevate or introduce new, more toxic glycoalkaloids into the cultivated gene pool. Therefore, it is important to increase our understanding of their inheritance, accumulation, and biosynthesis. Glycoalkaloids have two basic constituents – a glycosidic grouping and a steroid alkaloid skeleton. Steroid alkaloids are classified as solanidanes and spirosolanes, of which solanidine and solasodine are, respectively, representatives. RFLP-mapped, diploid, reciprocal backcross potato progenies involving the parents S. tuberosum and S. berthaultii, which produce solanidine and solasodine, respectively, were analyzed for segregation of the glycoalkaloids solanine, chaconine, solasodine and solamargine to identify quantitative trait loci (QTLs) for the production of the aglycones solanidine and solasodine. The F
1 clone M200-30 exhibited low to nondetectable levels of solasodine and solanidine, suggesting that expression was controlled by recessive genes. In a backcross to berthaultii (BCB) and backcross to tuberosum (BCT), several QTLs for the accumulation of solasodine and solanidine were identified. Three QTLs explaining approximately 20% of the variation in solasodine were identified in BCB on chromosomes 4, 6, and 12. Similarly, three QTLs were identified in BCT on chromosomes 4, 8 and 11, but these accounted for only 10% of the variation observed in solasodine accumulation. Two QTLs for solanidine were identified in BCT on chromosomes 1 and 4. The QTL located on chromosome 1 was highly significant, accounting for 17% and 22% of the variation in solanidine accumulation in 1994 and 1995, respectively. This same QTL was also detected in BCB. The QTLs detected in this study probably represent structural and/or regulatory genes controlling the accumulation of solasodine and solanidine. Results are discussed in the context of steroid alkaloid accumulation and biosynthesis.- Published
- 1998
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7. Microsatellites in Cassava (Manihot esculenta Crantz): discovery, inheritance and variability
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Chavarriaga-Aguirre, P. P., Maya, M. M., Bonierbale, M. W., Kresovich, S., Fregene, M. A., Tohme, J., and Kochert, G.
- Abstract
Abstract: Fourteen microsatellites containing GA-repeats were isolated and characterized in cassava (Manihot esculenta Crantz, Euphorbiaceae). Microsatellite heterozygosity (h) was estimated in 48 accessions using (
32 P)-end-labeled primers and in more than 500 accessions using fluorescence-based genotyping. Heterozygosity values ranged from 0.00 to 0.88 and the number of alleles detected varied from 1 to 15. The reproducibility of allele sizing was also assessed using fluorescence-based genotyping. The average inter-gel size difference was 1.03 nucleotides. Chi-square tests (χ2 ) were performed to analyse segregation distortion and the linkage between alleles segregating from either or both parents in an F1 mapping population. Most microsatellite loci segregated in the expected 1 : 1, 1 : 2 : 1 or 1 : 1 : 1 : 1 ratio. Linkage was detected between loci segregating from either parent, and segregation distortion from the male parent was detected for locus GA-131. Approximately 80% of the microsatellites detected one or two alleles per accession, suggesting a low degree of microsatellite locus duplication, an unexpected finding for a putative allopolyploid, highly heterozygous species. The high h values of most microsatellites, their amplification in other Manihot taxa and their suitability for high-throughput, fluorescence-based genotyping, make microsatellites the marker of choice for germplasm characterization and saturation of the cassava map.- Published
- 1998
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8. RFLP Mapping in Plant Breeding: New Tools for an Old Science
- Author
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Tanksley, S. D., Young, N. D., Paterson, A. H., and Bonierbale, M. W.
- Abstract
Breeders have traditionally improved plant varieties by selecting on the basis of phenotype. Now restriction fragment length polymorphism (RFLP) linkage maps are being constructed for most major crop plants and these maps provide a more direct method for selecting desirable genes via their linkage to easily detectable RFLP markers. The integration of RFLP techniques into plant breeding promises to: (1) Expedite the movement of desirable genes among varieties, (2) Allow the transfer of novel genes from related wild species, (3) Make possible the analysis of complex polygenic characters as ensembles of single Mendelian factors, and (4) Establish genetic relationships between sexually incompatible crop plants. In the future, high density RFLP maps may also make it possible to clone genes whose products are unknown, such as genes for disease resistance or stress tolerance.
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- 1989
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9. A molecular genetic map of cassava (Manihot esculenta Crantz)
- Author
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Fregene, M., Angel, F., Gomez, R., Rodriguez, F., Chavarriaga, P., Roca, W., Tohme, J., and Bonierbale, M.
- Abstract
Abstract: A genetic linkage map of cassava has been constructed with 132 RFLPs, 30 RAPDs, 3 microsatellites, and 3 isoenzyme markers segregating from the heterozygous female parent of an intraspecific cross. The F
1 cross was made between ‘TMS 30572’ and ‘CM 2177-2’, elite cassava cultivars from Nigeria and Colombia, respectively. The map consists of 20 linkage groups spanning 931.6 cM or an estimated 60% of the cassava genome. Average marker density is 1 per 7.9 cM. Since the mapping population is an F1 cross between heterozygous parents, with unique alleles segregating from either parent, a second map was constructed from the segregation of 107 RFLPs, 50 RAPDs, 1 microsatellite, and 1 isoenzyme marker from the male parent. Comparison of intervals in the male-and female-derived maps, bounded by markers heterozygous in both parents, revealed significantly less meiotic recombination in the gametes of the female than in the male parent. Six pairs of duplicated loci were detected by low-copy genomic and cDNA sequences used as probes. Efforts are underway to saturate the cassava map with additional markers, to join the male- and female-derived maps, and to elucidate genome organization in cassava.- Published
- 1997
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10. RFLP maps of potato and their alignment with the homoeologous tomato genome
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Gebhardt, C., Ritter, E., Barone, A., Debener, T., Walkemeier, B., Schachtschabel, U., Kaufmann, H., Thompson, R. D., Bonierbale, M. W., Ganal, M. W., Tanksley, S. D., and Salamini, F.
- Abstract
An RFLP linkage map of the potato is presented which comprises 304 loci derived from 230 DNA probes and one morphological marker (tuber skin color). The self-incompatibility locus of potato was mapped to chromosome I, which is homoeologous to tomato chromosome I. By mapping chromosome-specific tomato RFLP markers in potato and, vice versa, potato markers in tomato, the different potato and tomato RFLP maps were aligned to each other and the similarity of the potato and tomato genome was confirmed. The numbers given to the 12 potato chromosomes are now in accordance with the established tomato nomenclature. Comparisons between potato RFLP maps derived from different genetic backgrounds revealed conservation of marker order but differences in chromosome and total map length. In particular, significant reduction of map length was observed in interspecific compared to intraspecific crosses. The distribution of regions with distorted segregation ratios in the genome was analyzed for four potato parents. The most prominent distortion of recombination was found to be caused by the self-incompatibility locus.
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- 1991
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11. Genetic mapping and utilization of quantitative trichome-mediated insect resistance in potato
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Bonierbale, M., Plaisted, R., and Tanksley, S.
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Introgression of trichome-mediated insect resistance from the wild speciesSolanum berthaultii has become a major focus of the potato improvement program at Cornell University during the past twelve years. Several quantitative characters are involved in this resistance which is effective against a wide range of pest types. Correlative biochemical assays have been developed to assay specific components of the resistance, and the effects of the resistance on the target pests have been studied. Quantitative laboratory assays and specific measurements of insect behavior and biology have increased the precision of selection and enable the investigation of the genetic control of the resistance.
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- 1992
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12. QTL analysis of potato tuberization
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van den Berg, J. H., Ewing, E. E., Plaisted, R. L., McMurry, S., and Bonierbale, M. W.
- Abstract
Quantitative trait loci (QTLs) affecting tuberization were detected in reciprocal backcrosses between Solanum tuberosum and S. berthaultii. Linkage analyses were performed between traits and RFLP alleles segregating from both the hybrid and the recurrent parent using a set of framework markers from the potato map. Eleven distinct loci on seven chromosomes were associated with variation in tuberization. Most of the loci had small effects, but a QTL explaining 27% of the variance was found on chromosome 5. More QTLs were detected while following alleles segregating from the recurrent S. tuberosum parent used to make the backcross than were detected by following alleles segregating from the hybrid parent. More than half of the alleles favoring tuberization were at least partly dominant. Tuberization was favored by an allele from S. berthaultii at 3 of the 5 QTLs detected by segregation from the hybrid parent. The additive effects of the QTLs for tuberization explained up to 53% of the phenotypic variance, and inclusion of epistatic effects increased this figure to 60%. The most common form of epistasis was that in which presence of an allele at each of 2 loci favoring tuberization was no more effective than the presence of a favorable allele at 1 of the 2 loci. The QTLs detected for tuberization traits are discussed in relationship to those previously detected for trichome-mediated insect resistance derived from the unadapted wild species.
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- 1996
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13. QTL analysis of potato tuber dormancy
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van den Berg, J. H., Ewing, E. E., Plaisted, R. L., McMurry, S., and Bonierbale, M. W.
- Abstract
The potential loss of chemical sprout inhibitors because of public concern over the use of pesticides underscores the desirability of breeding for long dormancy of potato ( Solanum tuberosum L.) tubers. Quantitative trait locus (QTL) analyses were performed in reciprocal backcrosses between S. tuberosumand S. berthaultii toward defining the complexity of dormancy. S. berthaultii is a wild Bolivian species characterized by a short-day requirement for tuberization, long tuber dormancy, and resistance to several insect pests. RFLP alleles segregating from the recurrent parents as well as from the interspecific hybrid were monitored in two segregating progenies. We detected QTLs on nine chromosomes that affected tuber dormancy, either alone or through epistatic interactions. Alleles from the wild parent promoted dormancy, with the largest effect at a QTL on chromosome 2. Long dormancy appeared to be recessive in the backcross to S. berthaultii (BCB). In BCB the additive effects of dormancy QTLs accounted for 48% of the measured phenotypic variance, and adding epistatic effects to the model explained only 4% more. In contrast, additive effects explained only 16% of the variance in the backcross to S. tuberosum(BCT), and an additional 24% was explained by the inclusion of epistatic effects. In BCB variation at all QTLs detected was associated with RFLP alleles segregating from the hybrid parent; in BCT all QTLs except for two found through epistasis were detected through RFLP alleles segregating from the recurrent parent. At least three dormancy QTLs mapped to markers previously found to be associated with tuberization in these crosses.
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- 1996
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14. A test of the maximum heterozygosity hypothesis using molecular markers in tetraploid potatoes
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Bonierbale, M. W., Plaisted, R. L., and Tanksley, S. D.
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It has been theorized that in cross-pollinated polyploid species hybrid vigor is maximized by the frequent occurrence of more than two alleles per chromosomal locus. In polyploid crops this condition of maximum heterozygosity has been reported to be associated with increased yield and optimum field performance. We report herein the first direct test of the maximum heterozygosity hypothesis. Molecular markers were used to examine the association between maximum heterozygosity and several components of yield in three different populations of tetraploid potatoes. The results indicate that the value of maximum heterozygosity is not universal but dependent on the genetic background of the material under evaluation. In a cross between adapted breeding lines, homozygosity was negatively correlated with tuber yield, and maximum heterozygosity was positively correlated with the proportion of tuber yield in the large-size fraction. In contrast, in crosses between adapted and unadapted parents, maximum heterozygosity had no detectable effect on any character. Quantitative trait locus (QTL) analysis of the three populations reveals that, regardless of the genetic background, additive genetic effects are more strongly correlated with the components of yield than are any measures of heterozygosity and that some common QTLs may be influencing yield in all three populations.
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- 1993
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15. QTL analysis of trichome-mediated insect resistance in potato
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Bonierbale, M. W., Plaisted, R. L., Pineda, O., and Tanksley, S. D.
- Abstract
Genetic mapping of several components of a complex type of insect resistance has been undertaken as a means toward more efficient use of the valuable characteristics of a wild relative of potato. RFLP maps constructed on interspecific diploid progenies of Solanum tuberosum × S. berthaultii were used in conjunction with morphological, biochemical and biological phenotyping to identify quantitative trait loci (QTLs) contributing to trichome-mediated insect resistance. By superimposing QTL data for a wide range of phenotypes including biochemical assays, correlative and direct screens for insect resistance, and adaptation to the target environment on the genetic maps, we have addressed the organization, action and interaction of genes controlling the resistance mechanism. The outcome contributes to an understanding of the association between component traits and between desirable and undesirable features of the donor species generated in an applied breeding program. Research is proceeding toward the development of selectable markers for the introgression and transfer of this resistance among potato gene pools.
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- 1994
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16. AFLP analysis of relationships among cassava and other Manihot species
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Roa, A. C., Maya, M. M., Duque, M. C., Tohme, J., Allem, A. C., and Bonierbale, M. W.
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Abstract: Despite the worldwide importance of cultivated cassava (M. esculenta Crantz) its origin and taxonomic relationships with other species in the genus have not been clearly established. We evaluated a representative sample of the crop’s diversity and six wild taxa with AFLPs to estimate genetic relationships within the genus. Groupings of accessions of each species by data analysis corresponded largely with their previous taxonomic classifications. A mixed group, consisting of Manihot esculenta subsp. flabellifolia and M. esculenta subsp. peruviana, was most similar to cassava, while M. aesculifolia, M. brachyloba, and M. carthaginensis were more distant. Species-specific markers, which may be useful in germ-plasm classification or introgression studies, were suggested by the unique presence of AFLP products in samples of each of the three wild species. Heterogeneity of similarities among individuals of certain species suggested the existence of intraspecific gene pools, a hypothesis that was supported by morphological or ecogeographic evidence with varying degrees of success. Quantitative assessment of genetic diversity revealed greater homogeneity among cassava accessions than among itsclosest wild relatives. The demonstration of unique genetic diversity in the two M. esculenta subspecies and their genetic similarity to the crop supports the hypothesis that these materials may be the ancestors of cassava.
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- 1997
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17. L’irréversibilité du traitement hormonal confrontée à l’histologie chez les transsexuels FtM
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Vermalle, M., Lazard, A., Cravello, L., Perchenet, A.S., Lagrange, G., Drai, D., Gorin, A., Maquigneau, A., Brue, T., Bonierbale, M., and Albarel, F.
- Abstract
Il existe actuellement des débats portant sur le caractère irréversible de l’hormonothérapie chez les personnes transsexuelles. Si, en ce qui concerne les FtM (femme vers homme), Il est connu que les androgènes ont une action sur les organes génitaux, il existe peu d’informations sur la réversibilité de ces effets.
- Published
- 2015
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