205 results on '"Gooding, J. Justin"'
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2. Understanding the Role of Small Platinum Island Size on Crystalline Nickel Nanoparticles in Enhancing the Hydrogen Evolution Reaction
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Mariandry, Kevin, Cheong, Soshan, Gloag, Lucy, Ramadhan, Zeno R., Somerville, Samuel V., Benedetti, Tania M., Gooding, J. Justin, and Tilley, Richard D.
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The development of Pt on Ni nanoparticles is critical for the improvement of water splitting reactions. Here, the growth of small, below 2 nm Pt islands on crystalline branched Ni nanoparticles was investigated by tuning the size of the islands using a slow seeded-growth synthesis. Smaller island size results in a greater shift in the hydrogen binding energy on the Pt sites, as characterized by the hydrogen underpotential peak position in the voltammogram. This shift indicates the weakening of the binding to hydrogen, which leads to enhanced alkaline hydrogen evolution reaction activity with smaller Pt island size.
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- 2024
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3. Nanopore Blockade Sensors for Quantitative Analysis Using an Optical Nanopore Assay
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Doan, Thanh Hoang Phuong, Fried, Jasper P., Tang, Wenxian, Hagness, Daniel Everett, Yang, Ying, Wu, Yanfang, Tilley, Richard D., and Gooding, J. Justin
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Nanopore sensing is a popular biosensing strategy that is being explored for the quantitative analysis of biomarkers. With low concentrations of analytes, nanopore sensors face challenges related to slow response times and selectivity. Here, we demonstrate an approach to rapidly detect species at ultralow concentrations using an optical nanopore blockade sensor for quantitative detection of the protein vascular endothelial growth factor (VEGF). This sensor relies on monitoring fluorescent polystyrene nanoparticles blocking nanopores in a nanopore array of 676 nanopores. The fluorescent signal is read out using a wide-field fluorescence microscope. Nonspecific blockade events are then distinguished from specific blockade events based on the ability to pull the particles out of the pore using an applied electric field. This allows the detection of VEGF at sub-picomolar concentration in less than 15 min.
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- 2024
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4. In Nanoconfined Environments, Larger Ions in the Electrolyte Influence the Local Proton Availability for the Oxygen Reduction Reaction
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Sims, Matthew, Wang, Minzhi, Wordsworth, Johanna, Alinezhad, Ali, Tilley, Richard D., Schuhmann, Wolfgang, Ho, Junming, Benedetti, Tania M., and Gooding, J. Justin
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The impact of the electrolyte ion size on electrocatalytic reactions that occur within nanoconfined volumes is currently unknown. Herein, the effect of the size of solvated alkali metal ions on the oxygen reduction reaction (ORR) in acidic electrolytes was explored by using nanoparticles that contain isolated Pt nanochannels of 1–2 nm in diameter. The exterior surface of the nanoparticles was passivated to ensure that the ORR occurred only in the nanoconfined volume defined by the nanochannels. A number of alkali metal ions, with different hydrated sizes, were added into the acidic electrolyte, and different electrolyte ionic strengths were used to establish different levels of nanoconfinement. The results show that the ORR activity at comparatively positive applied potentials is not affected by the presence and nature of the alkali metal ions in the electrolyte. At less positive potentials, however, the activity is influenced by the presence of alkali metal ions in the electrolyte, and this is dependent on both the identity of the alkali metal ions and the electrolyte ionic strength. The differences in activities at less positive potentials are attributed to differences in the alkali metal ions’ accessibility to the nanoconfined space with Li+being accessible and decreasing the electrocatalytic activity relative to inaccessible K+ions that cannot enter the nanoconfined channels. This was corroborated by molecular dynamics modeling suggesting that the energy penalty for the alkali metal ions to enter the nanochannels is different for the different alkali metal ions and is affected by the surface charge of the nanochannel walls.
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- 2024
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5. Electrochemically controlled blinking of fluorophores for quantitative STORM imaging
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Yang, Ying, Ma, Yuanqing, Berengut, Jonathan F., Lee, Lawrence K., Tilley, Richard D., Gaus, Katharina, and Gooding, J. Justin
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Stochastic optical reconstruction microscopy (STORM) allows wide-field imaging with single-molecule resolution by calculating the coordinates of individual fluorophores from the separation of fluorophore emission in both time and space. Such separation is achieved by photoswitching the fluorophores between a long-lived OFF state and an emissive ON state. Although STORM can image single molecules, molecular counting remains challenging due to undercounting errors from photobleached or overlapping dyes and overcounting artefacts from the repetitive random blinking of dyes. Here we show that fluorophores can be electrochemically switched for STORM imaging (EC-STORM), with excellent control over the switching kinetics, duty cycle and recovery yield. Using EC-STORM, we demonstrate molecular counting by using electrochemical potential to control the photophysics of dyes. The random blinking of dyes is suppressed by a negative potential but the switching-ON event can be activated by a short positive-potential pulse, such that the frequency of ON events scales linearly with the number of underlying dyes. We also demonstrate EC-STORM of tubulin in fixed cells with a spatial resolution as low as ~28 nm and counting of single Alexa 647 fluorophores on various DNA nanoruler structures. This control over fluorophore switching will enable EC-STORM to be broadly applicable in super-resolution imaging and molecular counting.
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- 2024
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6. Tuning the Pt–Ru Atomic Neighbors for Active and Stable Methanol Oxidation Electrocatalysis
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Poerwoprajitno, Agus R., Li, Qinyu, Cheong, Soshan, Gloag, Lucy, Yang, Yuwei, Subhash, Bijil, Bedford, Nicholas M., Watt, John, Huber, Dale L., Gooding, J. Justin, Schuhmann, Wolfgang, and Tilley, Richard D.
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Controlling the coordination environment of the nanocatalyst surface is a major synthetic challenge to producing electrocatalysts with high activity and high stability. This is particularly important for the methanol oxidation reaction (MOR) in which multiple neighboring metal atoms are needed to prevent CO poisoning. Using a combination of tunable Pt-island size and a spreading process, we can vary the Pt loading on branched Ru nanoparticles, which leads to tunable proportions of Pt–Pt and Pt–Ru neighboring atoms at the surface. The controlled coordination environments are shown to be critical to stripping poisoning CO intermediates and can be precisely tuned to achieve highly active and stable MOR catalysts. These results show a new concept in synthetically controlling the coordination environment around a catalytic site for improved activity and stability that can be applied to other multimetal nanocatalysts.
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- 2023
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7. Controlling Platinum Active Sites on Silver Nanoparticles for Hydrogen Evolution Reaction
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Mariandry, Kevin, Kokate, Ravindra, Somerville, Samuel V., Gloag, Lucy, Cheong, Soshan, Carroll, Liam R., Kumar, Priyank V., Gooding, J. Justin, and Tilley, Richard D.
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Growing Pt on Ag nanoparticles is a promising approach to forming catalysts that present active sites with both Pt and Ag available to improve the activity for the hydrogen evolution reaction (HER). By carefully controlling the concentration of a Pt precursor, the amount of Pt-decorated particles onto the Ag nanoparticles could be controlled to grow Pt islands between 0.6 and 1.5 nm. As a result, the relative amounts of the Ag–Pt active sites could be tuned. The smallest, 0.6 nm Pt islands on the Ag nanoparticle, with the highest ratio of Ag–Pt to Pt–Pt sites was found to have the highest activity and an accelerated Volmer step. DFT modeling showed that the improved performance was due to increased electron density on Pt from electron donation from neighboring Ag that leads to weaker Pt–H binding and the presence of more oxophilic Ag that can bind −OH on the active site that accelerates the water splitting.
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- 2023
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8. Electrostatic Assembly of Multiarm PEG-Based Hydrogels as Extracellular Matrix Mimics: Cell Response in the Presence and Absence of RGD Cell Adhesive Ligands
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Suwannakot, Panthipa, Nemec, Stephanie, Peres, Newton Gil, Du, Eric Y., Kilian, Kristopher A., Gaus, Katharina, Kavallaris, Maria, and Gooding, J. Justin
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Synthetic hydrogels have been used widely as extracellular matrix (ECM) mimics due to the ability to control and mimic physical and biochemical cues observed in natural ECM proteins such as collagen, laminin, and fibronectin. Most synthetic hydrogels are formed viacovalent bonding resulting in slow gelation which is incompatible with drop-on-demand 3D bioprinting of cells and injectable hydrogels for therapeutic delivery. Herein, we developed an electrostatically crosslinked PEG-based hydrogel system for creating high-throughput 3D in vitro models using synthetic hydrogels to mimic the ECM cancer environment. A 3-arm PEG-based polymer backbone was first modified with either permanent cationic charged moieties (2-(methacryloyloxy)ethyl trimethylammonium) or permanent anionic charged moieties (3-sulfopropyl methacrylate potassium salt). The resulting charged polymers can be conjugated further with various amounts of cell adhesive RGD motifs (0, 25, 75, and 98%) to study the influences of RGD motifs on breast cancer (MCF-7) spheroid formation. Formation, stability, and mechanical properties of hydrogels were tested with, and without, RGD to evaluate the cellular response to material parameters in a 3D environment. The hydrogels can be degraded in the presence of salts at room temperature by breaking the interaction of oppositely charged polymer chains. MCF-7 cells could be released with high viability through brief exposure to NaCl solution. Flow cytometry characterization demonstrated that embedded MCF-7 cells proliferate better in a softer (60 Pa) 3D hydrogel environment compared to those that are stiffer (1160 Pa). As the stiffness increases, the RGD motif plays a role in promoting cell proliferation in the stiffer hydrogel. Flow cytometry characterization demonstrated that embedded MCF-7 cells proliferate better in a softer (60 Pa) 3D hydrogel environment compared to those that are stiffer (1160 Pa). As the stiffness increases, the RGD motif plays a role in promoting cell proliferation in the stiffer hydrogel. Additionally, cell viability was not impacted by the tested hydrogel stiffness range between 60 to 1160 Pa. Taken together, this PEG-based tuneable hydrogel system shows great promise as a 3D ECM mimic of cancer extracellular environments with controllable biophysical and biochemical properties. The ease of gelation and dissolution through salt concentration provides a way to quickly harvest cells for further analysis at any given time of interest without compromising cell viability.
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- 2023
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9. Synthetic Strategies to Enhance the Electrocatalytic Properties of Branched Metal Nanoparticles
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Poerwoprajitno, Agus R., Cheong, Soshan, Gloag, Lucy, Gooding, J. Justin, and Tilley, Richard D.
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Branched metal nanoparticles have unique catalytic properties because of their high surface area with multiple branches arranged in an open 3D structure that can interact with reacting species and tailorable branch surfaces that can maximize the exposure of desired catalytically active crystal facets. These exceptional properties have led to the exploration of the roles of branch structural features ranging from the number and dimensions of branches at the larger scales to the atomic-scale arrangement of atoms on precise crystal facets. The fundamental significance of how larger-scale branch structural features and atomic-scale surface faceting influence and control the catalytic properties has been at the forefront of the design of branched nanoparticles for catalysis. Current synthetic advances have enabled the formation of branched nanoparticles with an unprecedented degree of control over structural features down to the atomic scale, which have unlocked opportunities to make improved nanoparticle catalysts. These catalysts have high surface areas with controlled size and surface facets for achieving exceedingly high activity and stability. The synthetic advancement has recently led to the use of branched nanoparticles as ideal substrates that can be decorated with a second active metal in the form of islands and single atoms. These decorated branched nanoparticles have new and highly effective catalytic active sites where both branch metal and decorating metal play essential roles during catalysis.
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- 2022
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10. A Transparent Semiconducting Surface for Capturing and Releasing Single Cells from a Complex Cell Mixture
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Lian, Jiaxin, Tang, Wenxian, Yang, Ying, Vaidyanathan, Ramanathan, Gonçales, Vinicius R., Arman, Seyed Yousef, Tilley, Richard D., and Gooding, J. Justin
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Selective isolation of individual target cells from a heterogeneous population is technically challenging; however, the ability to retrieve single cells can have high significance in various aspects of biological research. Here, we present a new photoelectrochemical surface based on a transparent electrode that is compatible with high-resolution fluorescence microscopy for isolating individual rare cells from complex biological samples. This is underpinned by two important factors: (i) careful design of the electrode by patterning discrete Au disks of micron dimension on amorphous silicon–indium tin oxide films and (ii) orthogonal surface chemistry, which modifies the patterned electrode with self-assembly layers of different functionalities, to selectively capture target cells on the Au disks and resist cell binding to the amorphous silicon surface. The co-stimulation of the surface using light from a microscope and an electric potential triggers the reductive desorption of the alkanethiol monolayer from the Au disks to release the single cells of interest from the illuminated regions only. Using circulating tumor cells as a model, we demonstrate the capture of cancer cells on an antibody-coated surface and selective release of single cancer cells with low expression of epithelial cell adhesion molecules.
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- 2022
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11. Optical Nanopore Sensors for Quantitative Analysis
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Fried, Jasper P., Wu, Yanfang, Tilley, Richard D., and Gooding, J. Justin
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Nanopore sensors have received significant interest for the detection of clinically important biomarkers with single-molecule resolution. These sensors typically operate by detecting changes in the ionic current through a nanopore due to the translocation of an analyte. Recently, there has been interest in developing optical readout strategies for nanopore sensors for quantitative analysis. This is because they can utilize wide-field microscopy to independently monitor many nanopores within a high-density array. This significantly increases the amount of statistics that can be obtained, thus enabling the analysis of analytes present at ultralow concentrations. Here, we review the use of optical nanopore sensing strategies for quantitative analysis. We discuss optical nanopore sensing assays that have been developed to detect clinically relevant biomarkers, the potential for multiplexing such measurements, and techniques to fabricate high density arrays of nanopores with a view toward the use of these devices for clinical applications.
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- 2022
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12. Highly efficient and stable Ru nanoparticle electrocatalyst for the hydrogen evolution reaction in alkaline conditionsElectronic supplementary information (ESI) available: Experimental procedure; TEM images and particle size distributions; Rietveld refinements; STEM-EDS elemental mapping; XPS spectra of all three Ru samples; TGA analysis; HER testing protocol; comparison of HER activity in alkaline conditions; PXRD of Pt/C reference samples; modelling of EIS spectra; electrochemical active surface area (ECSA) determination and specific activities and references (PDF). See DOI: https://doi.org/10.1039/d2cy00177b
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Søndergaard-Pedersen, Frederik, Lakhotiya, Harish, Bøjesen, Espen Drath, Bondesgaard, Martin, Myekhlai, Munkhshur, Benedetti, Tania M., Gooding, J. Justin, Tilley, Richard D., and Iversen, Bo B.
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Developing alternatives to platinum-based electrocatalysts for the hydrogen evolution reaction (HER) is an important challenge for realizing the green transition. This is especially the case for alkaline conditions where Pt-based catalysts have very poor stability. Here, we demonstrate a new solvothermal synthesis method with facile allotropism control for selectively obtaining hexagonal-close-packed (hcp) and face-centered cubic (fcc) ruthenium nanoparticles. Both samples are highly active and durable HER catalysts in alkaline conditions outperforming state-of-the-art Pt/C. However, the samples show markedly different stabilities. The hcp sample shows exceptional stability for 12 hours constant operation at 10 mA cm−2with an overpotential that only increases 6 mV whereas the fcc sample increases 50 mV and the commercial Pt/C more than 350 mV. The significant variation in the stability of two Ru allotropes could be attributed to the difference in their crystal symmetries. Thus, this study underlines the importance of controlling the crystal structure of nanoparticle electrocatalysts and underlines the potential of using relatively cheaper Ru as an alternative to Pt for HER in alkaline conditions.
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- 2022
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13. Engineering regioselectivity in the hydrosilylation of alkynes using heterobimetallic dual-functional hybrid catalystsElectronic supplementary information (ESI) available Experimental details, spectral and catalysis data. See DOI: 10.1039/d1cy01804c
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Roemer, Max, Keaveney, Sinead T., Gonçales, Vinicius R., Lian, Jiaxin, Downes, James E., Gautam, Shreedhar, Gooding, J. Justin, and Messerle, Barbara A.
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The synthesis and characterization of carbon black supported rhodium and iridium heterobimetallic catalysts, termed hybrid catalysts, and their application in the hydrosilylation of alkynes is described. An aryl diazonium grafting procedure was applied to simultaneously immobilize Rh and Ir pyrazole–triazole complexes with tethers of varying lengths to carbon black, yielding the hybrid catalysts. The complexes differ in metal centre oxidation state and co-ligands, which are CO or Cp*Cl for the Rh complexes and Cp*Cl for the Ir complexes. The immobilization results in simultaneous surface binding and modification of the Rh complexes bearing CO-ligands. In this process, the CO ligands are removed and the overall structure of the catalytically active complex is altered. Analysis of the hybrid catalysts by XPS and SEM/EDX shows that the catalysts bear both surface bound Rh- and Ir-complexes. The Rh content is substantially higher than the Ir content. This is due to more efficient binding of the modified Rh complexes to the carbon black, as they feature two potential binding sites. Synchrotron based X-ray absorption spectroscopy (XAS) at the Rh K- and Ir L3edges further confirms the presence of the surface bound metal complexes. There is no indication that the presence of a secondary metal affects the electronic structure of the adjacent metal in the systems under investigation, for either the long or short tether derivatives. The performance of the different catalysts was assessed for promoting the hydrosilylation of alkynes, an important industrially relevant reaction. All catalysts are highly efficient. The modified Rh sites are α-selective in the product formation on activation of terminal alkynes, while the RhCp*Cl and IrCp*Cl sites are β(Z)-selective. When operating at mild conditions with high metal loadings, the surface bound Rh catalyst is the active species, while the Ir sites are inactive. At a lower overall surface coverage or higher temperature, the Ir sites become active, which allows engineering of the regioselectivity by adjusting surface coverages and metal loadings.
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- 2022
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14. A calibration-free approach to detecting microRNA with DNA-modified gold coated magnetic nanoparticles as dispersible electrodes
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Hoque, Sharmin, Gonçales, Vinicius R., Bakthavathsalam, Padmavathy, Tilley, Richard D., and Gooding, J. Justin
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Gold coated magnetic nanoparticles (Au@MNPs), modified with DNA sequences give dispersible electrodes that can detect ultralow amounts of microRNAs and other nucleic acids but, as with most other sensors, they require calibration. Herein we show how to adapt a calibration free approach for electrochemical aptamer-based sensors on bulk electrodes to microRNA (miR-21) detection with methylene blue terminated DNA modified Au@MNPs. The electrochemical square wave voltammetry signal from the DNA-Au@MNPs when collected at a bulk electrode under magnetic control, decreases upon capture of miR-21. We show that the square wave voltammogram has concentration dependent and independent frequencies that can be used to give a calibration free signal.
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- 2022
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15. A high-throughput 3D bioprinted cancer cell migration and invasion model with versatile and broad biological applicabilityElectronic supplementary information (ESI) available. See DOI: https://doi.org/10.1039/d2bm00651k
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Jung, MoonSun, Skhinas, Joanna N., Du, Eric Y., Tolentino, M. A. Kristine, Utama, Robert H., Engel, Martin, Volkerling, Alexander, Sexton, Andrew, O'Mahony, Aidan P., Ribeiro, Julio C. C., Gooding, J. Justin, and Kavallaris, Maria
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Understanding the underlying mechanisms of migration and metastasis is a key focus of cancer research. There is an urgent need to develop in vitro3D tumor models that can mimic physiological cell–cell and cell–extracellular matrix interactions, with high reproducibility and that are suitable for high throughput (HTP) drug screening. Here, we developed a HTP 3D bioprinted migration model using a bespoke drop-on-demand bioprinting platform. This HTP platform coupled with tunable hydrogel systems enables (i) the rapid encapsulation of cancer cells within in vivotumor mimicking matrices, (ii) in situand real-time measurement of cell movement, (iii) detailed molecular analysis for the study of mechanisms underlying cell migration and invasion, and (iv) the identification of novel therapeutic options. This work demonstrates that this HTP 3D bioprinted cell migration platform has broad applications across quantitative cell and cancer biology as well as drug screening.
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- 2022
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16. Stochastic Electrochemical Measurement of a Biofouling Layer on Gold
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Jamali, Sina S., Somerville, Samuel V., Dief, Essam M., and Gooding, J. Justin
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Adsorption of a biofouling layer on the surface of biosensors decreases the electrochemical activity and hence shortens the service life of biosensors, particularly implantable and wearable biosensors. Real-time quantification of the loss of activity is important for in situassessment of performance while presenting an opportunity to compensate for the loss of activity and recalibrate the sensor to extend the service life. Here, we introduce an electrochemical noise measurement technique as a tool for the quantification of the formation of a biofouling layer on the surface of gold. The technique uniquely affords thermodynamic and kinetic information without applying an external bias (potential and/or current), hence allowing the system to be appraised in its innate state. The technique relies on the analysis of non-faradaic current and potential fluctuations that are intrinsically generated by the interaction of charged species at the electrode surface, i.e., gold. An analytical model is extended to explain the significance of parameters drawn from statistical analysis of the noise signal. This concept is then examined in buffered media in the presence of albumin, a common protein in the blood and a known source of a fouling layer in biological systems. Results indicate that the statistical analysis of the noise signal can quantify the loss of electrochemical activity, which is also corroborated by impedance spectroscopy as a complementary technique.
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- 2024
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17. Investigating Spatial Heterogeneity of Nanoparticles Movement in Live Cells with Pair-Correlation Microscopy and Phasor Analysis
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Wang, Wenqian, Ma, Yuanqing, Bonaccorsi, Simone, Cong, Vu Thanh, Pandžić, Elvis, Yang, Zhengmin, Goyette, Jesse, Lisi, Fabio, Tilley, Richard D., Gaus, Katharina, and Gooding, J. Justin
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How nanoparticles distribute in living cells and overcome cellular barriers are important criteria in the design of drug carriers. Pair-correlation microscopy is a correlation analysis of fluctuation in the fluorescence intensity obtained by a confocal line scan that can quantify the dynamic properties of nanoparticle diffusion including the number of mobile nanoparticles, diffusion coefficient, and transit time across a spatial distance. Due to the potential heterogeneities in nanoparticle properties and the complexity within the cellular environment, quantification of averaged auto- and pair-correlation profiles may obscure important insights into the ability of nanoparticles to deliver drugs. To overcome this issue, we used phasor analysis to develop a data standardizing method, which can segment the scanned line into several subregions according to diffusion and address the spatial heterogeneity of nanoparticles moving inside cells. The phasor analysis is a fit-free method that represents autocorrelation profiles for each pixel relative to free diffusion on the so-called phasor plots. Phasor plots can then be used to select subpopulations for which the auto- and pair-correlation analysis can be performed separately. We demonstrate the phasor analysis for pair-correlation microscopy for investigating 16 nm, Cy5-labeled silica nanoparticles diffusing across the plasma membrane and green fluorescent proteins (GFP) diffusing across nuclear envelope in MCF-7 cells.
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- 2021
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18. Carbon supported hybrid catalysts for controlled product selectivity in the hydrosilylation of alkynesElectronic supplementary information (ESI) available: Experimental details, spectral and catalysis data (PDF), crystallographic data in cif-format for 3a, 6aand 6b. CCDC: 1961819–1961821. For ESI and crystallographic data in CIF or other electronic format see DOI: 10.1039/d0cy02136a
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Roemer, Max, Gonçales, Vinicius R., Keaveney, Sinead T., Pernik, Indrek, Lian, Jiaxin, Downes, James, Gooding, J. Justin, and Messerle, Barbara A.
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A series of Rh- and Ir-hybrid catalysts with varying tether lengths has been prepared by immobilization of RhI, RhIIIand IrIIIcomplexes on carbon black viaradical grafting. The performance of the different catalysts was assessed for the hydrosilylation of phenylacetylene with Et3SiH. The efficiency of the catalysts was dependent on the length of the tethers to the surface. The RhIII- and IrIIIhybrids afforded the β(Z)-vinylsilanes, as observed for the analogous homogeneous RhIIIcatalyst. No distinct product selectivity was observed when using the homogeneous RhIprecursors as catalysts. However, on using the RhIIIhybrid catalysts derived from the RhIprecursors to promote hydrosilylation, the major products were the α-vinylsilanes and the origin of the difference in reactivity was found to be a chemical modification of the catalysts during immobilization. Substrate scope is demonstrated for a number of alkynes, and feasible mechanisms supported by DFT calculations are proposed.
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- 2021
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19. Porous Graphene Oxide Films Prepared via the Breath-Figure Method: A Simple Strategy for Switching Access of Redox Species to an Electrode Surface
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Cheng, Rumei, Colombo, Rafael N. P., Zhang, Long, Nguyen, Duyen H. T., Tilley, Richard, Cordoba de Torresi, Susana I., Dai, Liming, Gooding, J. Justin, and Gonçales, Vinicius R.
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Porous materials can be modified with physical barriers to control the transport of ions and molecules through channels via an external stimulus. Such capability has brought attention toward drug delivery, separation methods, nanofluidics, and point-of-care devices. In this context, gated platforms on which access to an electrode surface of species in solution can be reversibly hindered/unhindered on demand are appearing as promising materials for sensing and microfluidic switches. The preparation of a reversible gated device usually requires mesoporous materials, nanopores, or molecularly imprinted polymers. Here, we show how the breath-figure method assembly of graphene oxide can be used as a simple strategy to produce gated electrochemical materials. This was achieved by forming an organized porous thin film of graphene oxide onto an ITO surface. Localized brushes of thermoresponsive poly(N-isopropylacrylamide) were then grown to specific sites of the porous film by in situ reversible addition-fragmentation chain-transfer polymerization. The gating mechanism relies on the polymeric chains to expand and contract depending on the thermal stimulus, thus modulating the accessibility of redox species inside the pores. The resulting platform was shown to reversibly hinder or facilitate the electron transfer of solution redox species by modulating temperature from the room value to 45 °C or vice versa.
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- 2020
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20. Tuning of the Aggregation Behavior of Fluorinated Polymeric Nanoparticles for Improved Therapeutic Efficacy
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Zhang, Cheng, Liu, Tianqing, Wang, Wenqian, Bell, Craig A., Han, Yanxiao, Fu, Changkui, Peng, Hui, Tan, Xiao, Král, Petr, Gaus, Katharina, Gooding, J. Justin, and Whittaker, Andrew K.
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Incorporation of fluorinated moieties in polymeric nanoparticles has been shown in many instances to increase their uptake by living cells and, hence, has proven to be a useful approach to enhancing delivery to cells. However, it remains unclear how incorporation of fluorine affects critical transport processes, such as interactions with membranes, intracellular transport, and tumor penetration. In this study, we investigate the influence of fluorine on transport properties using a series of rationally designed poly(oligo(ethylene glycol) methyl ether acrylate)-block-perfluoropolyether (poly(OEGA)m-PFPE) copolymers. Copolymers with different fluorine contents were prepared and exhibit aggregate in solution in a manner dependent on the fluorine content. Doxorubicin-conjugated poly(OEGA)20-PFPE nanoparticles with lower fluorine content exist in solution as unimers, leading to greater exposure of hydrophobic PFPE segments to the cell surface. This, in turn, results in greater cellular uptake, deeper tumor penetration, as well as enhanced therapeutic efficacy compared to that with the micelle-state nanoaggregates (poly(OEGA)10-PFPE and poly(OEGA)5-PFPE) with higher fluorine content but with less PFPE exposed to the cell membranes. Our results demonstrate that the aggregation behavior of these fluorinated polymers plays a critical role in internalization and transport in living cells and 3D spheroids, providing important design criteria for the preparation of highly effective delivery agents.
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- 2020
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21. Patterned Molecular Films of Alkanethiol and PLL-PEG on Gold–Silicate Interfaces: How to Add Functionalities while Retaining Effective Antifouling
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Wu, Yanfang, Lian, Jiaxin, Gonçales, Vinicius R., Pardehkhorram, Raheleh, Tang, Wenxian, Tilley, Richard D., and Gooding, J. Justin
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Spatial control of surface functionalization and interactions is essential for microarray-based analysis. This study reports the fabrication of two-dimensional molecular films with site-specific functionalities, forming microarrays at discrete locations. Arrays of microsized gold disks were produced on a silicate membrane using microfabrication. On these arrays, orthogonal self-assembly of molecules was performed that can specifically bind to gold or silicate. The gold array elements were functionalized with a range of alkanethiols and the silicate with polymeric poly-l-lysine-grafted-poly(ethylene glycol) (PLL-PEG). The surface functionalization on the gold disk array and the surrounding substrate was characterized at each step using X-ray photoelectron spectroscopy (XPS) to show that alkanethiols are specifically attached to the gold. PLL-PEG was used to provide resistance against nonspecific protein and cell adsorption and attached exclusively to the silicate. The effectiveness of the surface chemistry was validated by the selective self-assembly of a gold nanoparticle monolayer array on the gold regions. In a more sophisticated example, selective adhesion of MCF-7 cells to anti-EpCAM antibody modified gold areas of the gold–silicate surface was demonstrated to give a cell microarray. This study provides a general approach to fabricate chemical patterns on silicon-based devices with the convergence of microfabrication and material-specific surface modification, which may be useful to expand the functionalities and potential applications for patterned biomolecular films. Importantly, the ability to pattern surfaces with different surface chemistries is not limited to planar surfaces using this orthogonal surface-coupling approach.
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- 2020
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22. Metal–Organic Framework-Enhanced Solid-Phase Microextraction Mass Spectrometry for the Direct and Rapid Detection of Perfluorooctanoic Acid in Environmental Water Samples
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Suwannakot, Panthipa, Lisi, Fabio, Ahmed, Ezaz, Liang, Kang, Babarao, Ravichandar, Gooding, J. Justin, and Donald, William A.
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We report the development of metal–organic framework (MOF)-based probes for the direct and rapid detection and quantification of perfluorooctanoic acid (PFOA) by mass spectrometry. Four water-resistant MOFs—ZIF-8, UiO-66, MIL88-A, and Tb2(BDC)3—were coated on poly(dopamine) precoated stainless steel needles and used to rapidly preconcentrate PFOA from water for direct analysis by nanoelectrospray ionization mass spectrometry. The analytical performance of each MOF for detecting PFOA was correlated with both the calculated binding energy of the MOF for PFOA and the relative change in the surface area of the MOF upon exposure to PFOA. MOF-functionalized probes can be used for the rapid (<5 min) and sensitive quantification of PFOA molecules at low ng L–1levels in environmental water samples (i.e., tap water, rainwater, and seawater) with no sample preparation. The limit of detection of PFOA in ultrapure water was 11.0 ng L–1. Comparable accuracy to an accredited analytical method was achieved, despite the MOF-functionalized probe approach being ∼40 times quicker and requiring ∼10 times less sample. These features indicate that MOF-coated probes are promising for the direct and rapid monitoring of polyfluorinated substances and other pollutants in the field.
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- 2020
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23. Preserving the Exposed Facets of Pt3Sn Intermetallic Nanocubes During an Order to Disorder Transition Allows the Elucidation of the Effect of the Degree of Alloy Ordering on Electrocatalysis
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Chen, Hsiang-Sheng, Benedetti, Tania M., Gonçales, Vinicius R., Bedford, Nicholas M., Scott, Robert W. J., Webster, Richard F., Cheong, Soshan, Gooding, J. Justin, and Tilley, Richard D.
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Controlling which facets are exposed in nanocrystals is crucial to understanding different activity between ordered and disordered alloy electrocatalysts. We modify the degree of ordering of Pt3Sn nanocubes, while maintaining the shape and size, to enable a direct evaluation of the effect of the order on ORR catalytic activity. We demonstrate a 2.3-fold enhancement in specific activity by 60- and 30%-ordered Pt3Sn nanocubes compared to 95%-ordered. This was shown to be likely due to surface vacancies in the less-ordered particles. The greater order, however, results in higher stability of the electrocatalyst, with the more disordered nanoparticles showing the dissolution of tin and platinum species during electrocatalysis.
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- 2020
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24. Heterojunctions Based on Amorphous Silicon: A Versatile Surface Engineering Strategy To Tune Peak Position of Redox Monolayers on Photoelectrodes
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Gonçales, Vinicius R., Lian, Jiaxin, Gautam, Shreedhar, Hagness, Daniel, Yang, Ying, Tilley, Richard D., Ciampi, Simone, and Gooding, J. Justin
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Heterojunctions are typically used to generate large photovoltages and to influence the direction of flow of charge carriers on photovoltaic and photocatalytic devices. Herein, we propose how heterojunctions can be used as a pathway for tuning the peak position of redox active monolayers. This was possible by exploring the principle of contact between materials in heterojunctions leading to a common equilibrium Fermi level for both sides of the heterojunction. The phenomenon was demonstrated with thin layers of intrinsic amorphous silicon deposited on platinum, indium tin oxide, and either n-type or p-type crystalline silicon electrodes. At fixed light-intensity conditions, the potential required for electron transfer of a model redox probe was modulated according to the substrate on which the amorphous silicon was deposited. This allowed us to alter the peak position of a redox process occurring on the electrolyte side of the junction despite it being isolated from the underlying conducting material. We show how such an effect can be explored in a potential range that encompasses any of the redox monolayers electroactive in aqueous electrolytes.
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- 2020
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25. Direct Growth of Highly Strained Pt Islands on Branched Ni Nanoparticles for Improved Hydrogen Evolution Reaction Activity
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Alinezhad, Ali, Gloag, Lucy, Benedetti, Tania M., Cheong, Soshan, Webster, Richard F., Roelsgaard, Martin, Iversen, Bo B., Schuhmann, Wolfgang, Gooding, J. Justin, and Tilley, Richard D.
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The direct growth of Pt islands on lattice mismatched Ni nanoparticles is a major synthetic challenge and a promising strategy to create highly strained Pt atoms for electrocatalysis. By using very mild reaction conditions, Pt islands with tunable strain were formed directly on Ni branched particles. The highly strained 1.9 nm Pt-island on branched Ni nanoparticles exhibited high specific activity and the highest mass activity for hydrogen evolution (HER) in a pH 13 electrolyte. These results show the ability to synthetically tune the size of the Pt islands to control the strain to give higher HER activity.
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- 2019
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26. Cascade Reactions in Nanozymes: Spatially Separated Active Sites inside Ag-Core–Porous-Cu-Shell Nanoparticles for Multistep Carbon Dioxide Reduction to Higher Organic Molecules
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O’Mara, Peter B., Wilde, Patrick, Benedetti, Tania M., Andronescu, Corina, Cheong, Soshan, Gooding, J. Justin, Tilley, Richard D., and Schuhmann, Wolfgang
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Enzymes can perform complex multistep cascade reactions by linking multiple distinct catalytic sites via substrate channeling. We mimic this feature in a generalized approach with an electrocatalytic nanoparticle for the carbon dioxide reduction reaction comprising a Ag core surrounded by a porous Cu shell, providing different active sites in nanoconfined volumes. The architecture of the nanozyme provides the basis for a cascade reaction, which promotes C–C coupling reactions. The first step occurs on the Ag core, and the subsequent steps on the porous copper shell, where a sufficiently high CO concentration due to the nanoconfinement facilitates C–C bond formation. The architecture yields the formation of n-propanol and propionaldehyde at potentials as low as −0.6 V vs RHE.
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- 2019
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27. Lighting Up Biosensors: Now and the Decade To Come
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Ligler, Frances S. and Gooding, J. Justin
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Optical biosensors are defined as portable optical devices that use biorecognition molecules to interrogate a sample for the presence of a target. The capabilities of optical biosensors have expanded rapidly with advances in miniature optical components and molecular engineering. Biosensors to meet the needs in health and environmental monitoring and food safety have become commercially available, with many more in the pipeline. We review the innovative approaches to overcoming existing hurdles to practical biosensor designs and explore potential areas for future breakthroughs in optical biosensor technology.
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- 2019
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28. Electrochemistry on Tribocharged Polymers Is Governed by the Stability of Surface Charges Rather than Charging Magnitude
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Zhang, Jinyang, Rogers, Fergus J. M., Darwish, Nadim, Gonçales, Vinicius R., Vogel, Yan B., Wang, Fei, Gooding, J. Justin, Peiris, M. Chandramalika. R., Jia, Guohua, Veder, Jean-Pierre, Coote, Michelle L., and Ciampi, Simone
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Electrically insulating objects gain a net electrical charge when brought in and out of contact. This phenomenon—triboelectricity—involves the flow of charged species, but conclusively establishing their nature has proven extremely difficult. Here, we demonstrate an almost linear relationship between a plastic sample’s net negative charge and the amount of solution metal ions discharged to metallic particles with a coefficient of proportionality linked to its electron affinity (stability of anionic fragments). The maximum magnitude of reductive redox work is also material dependent: metallic particles grow to a larger extent over charged dielectrics that yield stable cationic fragments (smaller ionization energy). Importantly, the extent to which the sample can act as electron source greatly exceeds the net charging measured in a Faraday pail/electrometer set up, which brings direct evidence of triboeletricity being a mosaic of positive and negative charges rather than a homogeneous ensemble and defines for the first time their quantitative scope in electrochemistry.
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- 2019
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29. Simultaneous Functionalization of Carbon Surfaces with Rhodium and Iridium Organometallic Complexes: Hybrid Bimetallic Catalysts for Hydroamination
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Binding, Samantha C., Pernik, Indrek, Gonçales, Vinicius R., Wong, Chin M., Webster, Richard F., Cheong, Soshan, Tilley, Richard D., Garcia-Bennett, Alfonso E., Gooding, J. Justin, and Messerle, Barbara A.
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Carbon-based surfaces were explored here for the synthesis of heterometallic surface-bound catalysts. This takes advantage of catalytic enhancements found using bimetallic catalysts relative to monometallic analogues, as well as the advantages of heterogeneous catalysts over homogeneous catalysts. To achieve this, two organometallic cations with different metal centers, oxidation states, and coligands, [Rh(N,N′)(CO)2]+and [Ir(N,N′)Cp*Cl]+(N,N′ = pyrazolyltriazolylmethane ligands), were simultaneously immobilized onto the surface of carbon materials (carbon black and reduced graphene oxide). The relative concentration of the rhodium and iridium cations in the synthetic media was varied allowing for different metal ratios on the carbon surfaces. The composition of the complexes bound to the surfaces was confirmed using XPS which revealed the relative ratios of the iridium and the rhodium species on the surface, agreeing well with the values obtained by MP-AES. The materials were further characterized by N2absorption. The qualitative distribution of rhodium and iridium ions on the carbon surfaces was determined by STEM-EDX, revealing a uniform distribution of both complexes on the carbon surfaces. The efficiency of the materials as catalysts for intramolecular hydroamination was investigated. The data acquired demonstrated that the optimized ratio of rhodium and iridium on the carbon black material led to more effective catalysts than their monometallic counterparts. Having both complexes on the same carbon black surface presented an improvement in the catalytic activity compared to the complexes immobilized on separate particles.
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- 2019
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30. Challenges and Solutions in Developing Ultrasensitive Biosensors
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Wu, Yanfang, Tilley, Richard D., and Gooding, J. Justin
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This Perspective focuses on the latest strategies and challenges for the development of bioanalytical sensors with sub-picomolar detection limits. Achieving sub-picomolar detection limits has three major challenges: (1) assay sensitivity, (2) response time, and (3) selectivity (including limiting background signals). Each of these challenges is discussed, along with how nanomaterials provide the solutions. One strategy to gain greater sensitivity involves confining the sensing volume to the nanoscale, as used in nanopore- or nanoparticle-based sensors, because nanoparticles are ubiquitous in amplification. Methods to improve response time typically focus on obtaining an intimate mixture between the sensor and the sample either by extending the length scale of nanoscale sensors using nanostructuring or by dispersing magnetic nanoparticles through the sample to capture the analyte. Loading nanoparticles with many biorecognition species is one solution to help address the challenge of selectivity. Many examples in this Perspective explore the detection of prostate-specific antigen which enables a comparison between strategies. Finally, exciting future opportunities in developing single-molecule sensors and the requirements to go even lower in concentration are explored.
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- 2019
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31. The impact of nanoparticle shape on cellular internalisation and transport: what do the different analysis methods tell us?
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Wang, Wenqian, Gaus, Katharina, Tilley, Richard D., and Gooding, J. Justin
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This article focuses on how nanoparticle shape affects the cellular internalisation and transport of nanoparticles inside cells and what the different analytical methods for determining nanoparticle internalisation by cells tell us. Rod-shaped nanoparticles typically show greater cellular internalisation relative to spherical nanoparticles, although there are studies with contradictory conclusions. The contradiction may be a result of differences in the materials being used in the comparison and/or a result of the analytical method employed. Finally, future opportunities in studying cellular internalisation with 3D cell-culture models and light-sheet microscopy are discussed.
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- 2019
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32. DNA-Hybridization Detection on Si(100) Surfaces Using Light-Activated Electrochemistry: A Comparative Study between Bovine Serum Albumin and Hexaethylene Glycol as Antifouling Layers
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Zarei, Leila, Tavallaie, Roya, Choudhury, Moinul H., Parker, Stephen G., Bakthavathsalam, Padmavathy, Ciampi, Simone, Gonçales, Vinicius R., and Gooding, J. Justin
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Light can be used to spatially resolve electrochemical measurements on a semiconductor electrode. This phenomenon has been explored to detect DNA hybridization with light-addressable potentiometric sensors and, more recently, with light-addressable amperometric sensors based on organic-monolayer-protected Si(100). Here, a contribution to the field is presented by comparing sensing performances when bovine serum albumin (BSA) and hexaethylene glycol (OEG6) are employed as antifouling layers that resist nonspecific adsorption to the DNA-modified interface on Si(100) devices. What is observed is that both sensors based on BSA or OEG6initially allow electrochemical distinction among complementary, noncomplementary, and mismatched DNA targets. However, only surfaces based on OEG6can sustain electroactivity over time. Our results suggest that this relates to accelerated SiOxformation occasioned by BSA proteins adsorbing on monolayer-protected Si(100) surfaces. Therefore, DNA biosensors were analytically explored on low-doped Si(100) electrodes modified on the molecular level with OEG6as an antifouling layer. First, light-activated electrochemical responses were recorded over a range of complementary DNA target concentrations. A linear semilog relation was obtained from 1.0 × 10–11to 1.0 × 10–6mol L–1with a correlation coefficient of 0.942. Then, measurements with three independent surfaces indicated a relative standard deviation of 4.5%. Finally, selectivity tests were successfully performed in complex samples consisting of a cocktail mixture of four different DNA sequences. Together, these results indicate that reliable and stable light-activated amperometric DNA sensors can be achieved on Si(100) by employing OEG6as an antifouling layer.
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- 2018
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33. Electrocatalytic Nanoparticles That Mimic the Three-Dimensional Geometric Architecture of Enzymes: Nanozymes
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Benedetti, Tania M., Andronescu, Corina, Cheong, Soshan, Wilde, Patrick, Wordsworth, Johanna, Kientz, Martin, Tilley, Richard D., Schuhmann, Wolfgang, and Gooding, J. Justin
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Enzymes are characterized by an active site that is typically embedded deeply within the protein shell thus creating a nanoconfined reaction volume in which high turnover rates occur. We propose nanoparticles with etched substrate channels as a simplified enzyme mimic, denominated nanozymes, for electrocatalysis. We demonstrate increased electrocatalytic activity for the oxygen reduction reaction using PtNi nanoparticles with isolated substrate channels. The PtNi nanoparticles comprise an oleylamine capping layer that blocks the external surface of the nanoparticles participating in the catalytic reaction. Oxygen reduction mainly occurs within the etched channels providing a nanoconfined reaction volume different from the bulk electrolyte conditions. The oxygen reduction reaction activity normalized by the electrochemically active surface area is enhanced by a factor of 3.3 for the nanozymes compared to the unetched nanoparticles and a factor of 2.1 compared to mesoporous PtNi nanoparticles that possess interconnecting pores.
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- 2018
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34. Cubic-Core Hexagonal-Branch Mechanism To Synthesize Bimetallic Branched and Faceted Pd–Ru Nanoparticles for Oxygen Evolution Reaction Electrocatalysis
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Gloag, Lucy, Benedetti, Tania M., Cheong, Soshan, Marjo, Christopher E., Gooding, J. Justin, and Tilley, Richard D.
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A major synthetic challenge is to make metal nanoparticles with nanosized branches and well-defined facets for high-performance catalysts. Herein, we introduce a mechanism that uses the growth of hexagonal crystal structured branches off cubic crystal structured core nanoparticles. We control the growth to form Pd-core Ru-branch nanoparticles that have nanosized branches with low index Ru facets. We demonstrate that the branched and faceted structural features of the Pd–Ru nanoparticles retain high catalytic activity while also achieving high stability for the oxygen evolution reaction.
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- 2018
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35. 'Connecting electrodes with light: one wire, many electrodes'
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Choudhury, Moinul H., Ciampi, Simone, Yang, Ying, Tavallaie, Roya, Zhu, Ying, Zarei, Leila, Gonqalesa, Vinicius R., and Gooding, J. Justin
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Electrodes ,Business ,Computers and office automation industries ,Engineering and manufacturing industries ,Business, international - Abstract
Abstract: The finite space taken up by the array of electrical terminals and conductive pads severely limits the achievable density of electrodes in the device. Here it is shown a [...]
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- 2016
36. Confronting Racism in Chemistry Journals
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Burrows, Cynthia J., Huang, Jiaxing, Wang, Shu, Kim, Hyun Jae, Meyer, Gerald J., Schanze, Kirk, Lee, T. Randall, Lutkenhaus, Jodie L., Kaplan, David, Jones, Christopher, Bertozzi, Carolyn, Kiessling, Laura, Mulcahy, Mary Beth, Lindsley, Craig W., Finn, M. G., Blum, Joel D., Kamat, Prashant, Choi, Wonyong, Snyder, Shane, Aldrich, Courtney C., Rowan, Stuart, Liu, Bin, Liotta, Dennis, Weiss, Paul S., Zhang, Deqing, Ganesh, Krishna N., Atwater, Harry A., Gooding, J. Justin, Allen, David T., Voigt, Christopher A., Sweedler, Jonathan, Schepartz, Alanna, Rotello, Vincent, Lecommandoux, Sébastien, Sturla, Shana J., Hammes-Schiffer, Sharon, Buriak, Jillian, Steed, Jonathan W., Wu, Hongwei, Zimmerman, Julie, Brooks, Bryan, Savage, Phillip, Tolman, William, Hofmann, Thomas F., Brennecke, Joan F., Holme, Thomas A., Merz, Kenneth M., Scuseria, Gustavo, Jorgensen, William, Georg, Gunda I., Wang, Shaomeng, Proteau, Philip, Yates, John R., Stang, Peter, Walker, Gilbert C., Hillmyer, Marc, Taylor, Lynne S., Odom, Teri W., Carreira, Erick, Rossen, Kai, Chirik, Paul, Miller, Scott J., Shea, Joan-Emma, McCoy, Anne, Zanni, Martin, Hartland, Gregory, Scholes, Gregory, Loo, Joseph A., Milne, James, Tegen, Sarah B., Kulp, Daniel T., and Laskin, Julia
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- 2020
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37. Rod-shaped mesoporous silica nanoparticles for nanomedicine: recent progress and perspectives
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Cong, Vu Thanh, Gaus, Katharina, Tilley, Richard D., and Gooding, J. Justin
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ABSTRACTIntroduction: Interest in mesoporous silica nanoparticles for drug delivery has resulted in a good understanding of the impact of size and surface chemistry of these nanoparticles on their performance as drug carriers. Shape has emerged as an additional factor that can have a significant effect on delivery efficacy. Rod-shaped mesoporous silica nanoparticles show improvements in drug delivery relative to spherical mesoporous silica nanoparticles.Areas covered: This review summarises the synthesis methods for producing rod-shaped mesoporous silica nanoparticles for use in nanomedicine. The second part covers recent progress of mesoporous silica nanorods by comparing the impact of sphere and rod-shape on drug delivery efficiency.Expert opinion: As hollow mesoporous silica nanorods are capable of higher drug loads than most other drug delivery vehicles, such particles will reduce the amount of mesoporous silica in the body for efficient therapy. However, the importance of nanoparticle shape on drug delivery efficiency is not well understood for mesoporous silica. Studies that visualize and quantify the uptake pathway of mesoporous silica nanorods in specific cell types and compare the cellular uptake to the well-studied nanospheres should be the focus of research to better understand the role of shape in uptake.
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- 2018
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38. Understanding the Effect of Au in Au–Pd Bimetallic Nanocrystals on the Electrocatalysis of the Methanol Oxidation Reaction
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Kelly, Cameron H. W., Benedetti, Tania M., Alinezhad, Ali, Schuhmann, Wolfgang, Gooding, J. Justin, and Tilley, Richard D.
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Pd or Pt alloyed with a secondary metal are the typical catalysts at the anode for the direct oxidation of methanol. The secondary metal is employed to diminish deactivation commonly ascribed to CO poisoning. Here we investigate the origin of the improved performance of Au–Pd core–shell and alloy nanocrystals as electrocatalysts for the methanol oxidation reaction (MOR), relative to Pd alone. Monodisperse Au–Pd core–shell nanocrystals were synthesized using H2as a mild reducing agent followed by annealing under a 5% H2atmosphere to produce the Au–Pd alloys. The nanocrystals were characterized using high-resolution electron microscopy to confirm their structures. The core–shell and alloy nanocrystals showed an improvement in specific activity with respect to pure Pd nanocrystals. Importantly, the stability was also improved by the inclusion of Au for both nanocrystals, being 2.7× higher for the alloy than for the core–shell after 30 min, while the activity is completely lost for the Pd nanocrystals within 10 min. We show that there is no evidence of CO formation for any of the Pd-based catalysts in an alkaline environment. The origin of the improvement in terms of both activity and stability results from positive shifts in the PdO formation/reduction potential caused by the presence of Au, which results in more Pd sites available for the MOR.
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- 2018
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39. Ultralow- and Low-Background Surfaces for Single-Molecule Localization Microscopy of Multistep Biointerfaces for Single-Molecule Sensing
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Zhao, Manchen, Nicovich, Philip R., Janco, Miro, Deng, Qiji, Yang, Zhengmin, Ma, Yuanqing, Böcking, Till, Gaus, Katharina, and Gooding, J. Justin
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Single-molecule localization microscopy (SMLM) has created the opportunity of pushing fluorescence microscopy from being a biological imaging tool to a surface characterization and possibly even a quantitative analytical tool. The latter could be achieved by molecular counting using pointillist SMLM data sets. However, SMLM is especially sensitive to background fluorescent signals, which influences any subsequent analysis. Therefore, fabricating sensing surfaces that resist nonspecific adsorption of proteins, even after multiple modification steps, has become paramount. Herein is reported two different ways to modify surfaces: dichlorodimethylsilane-biotinylated bovine serum albumin-Tween-20 (DbT20) and poly-l-lysine grafted polyethylene glycol (PLL-PEG) mixed with biotinylated PLL-PEG (PLL-PEG/PEGbiotin). The results show that the ability to resist nonspecific adsorption of DbT20 surfaces deteriorates with an increase in the number of modification steps required after the addition of the DbT20, which limits the applicability of this surface for SMLM. As such, a new surface for SMLM that employs PLL-PEG/PEGbiotin was developed that exhibits ultralow amounts of nonspecific protein adsorption even after many modification steps. The utility of the surface was demonstrated for human influenza hemagglutinin-tagged mEos2, which was directly pulled down from cell lysates onto the PLL-PEG/PEGbiotin surface. The results strongly indicated that the PLL-PEG/PEGbiotin surface satisfies the criteria of SMLM imaging of a negligible background signal and negligible nonspecific adsorption.
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- 2018
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40. A flexible polyaniline-based bioelectronic patchElectronic supplementary information (ESI) available. See DOI: 10.1039/c7bm00880e
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Cui, Chen, Faraji, Nastaran, Lauto, Antonio, Travaglini, Lorenzo, Tonkin, Joanne, Mahns, David, Humphrey, Eleanor, Terracciano, Cesare, Gooding, J. Justin, Seidel, Jan, and Mawad, Damia
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Bioelectronic materials based on conjugated polymers are being developed in the hope to interface with electroresponsive tissues. We have recently demonstrated that a polyaniline chitosan patch can efficiently electro-couple with cardiac tissue modulating its electrophysiology. As a promising bioelectronic material that can be tailored to different types of devices, we investigate here the impact of varying the synthesis conditions and time of the in situpolymerization of aniline (An) on the sheet resistance of the bioelectronic patch. The sheet resistance increases significantly for samples that have either the lowest molar ratio of oxidant to monomer or the highest molar ratio of dopant to monomer, while the polymerization time does not have a significant effect on the electrical properties. Conductive atomic force microscopy reveals that the patch with the lowest sheet resistance has a connected network of the conductive phase. In contrast, patches with higher sheet resistances exhibit conductive areas of lower current signals or isolated conductive islands of high current signals. Having identified the formulation that results in patches with optimal electrical properties, we used it to fabricate patches that were implanted in rats for two weeks. It is shown that the patch retains an electroactive nature, and only mild inflammation is observed with fibrous tissue encapsulating the patch.
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- 2018
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41. Versatile Fabrication Approach of Conductive Hydrogels via Copolymerization with Vinyl Monomers
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Jiang, Lin, Gentile, Carmine, Lauto, Antonio, Cui, Chen, Song, Yihui, Romeo, Tony, Silva, Saimon M., Tang, Owen, Sharma, Poonam, Figtree, Gemma, Gooding, J. Justin, and Mawad, Damia
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Functionalized poly(ethylene dioxythiophene) (f-PEDOT) was copolymerized with two vinyl monomers of different hydrophilicity, acrylic acid and hydroxyethyl methacrylate, to produce electroconductive hydrogels with a range of physical and electronic properties. These hydrogels not only possessed tailored physical properties, such as swelling ratios and mechanical properties, but also displayed electroactivity dependent on the chemical composition of the network. Raman spectroscopy indicated that the functional PEDOT in the hydrogels is in an oxidized form, most likely accounting for the good electrochemical response of the hydrogels observed in physiological buffer. In vitro cell studies showed that cardiac cells respond differently when seeded on hydrogel substrates with different compositions. This study presents a facile approach for the fabrication of electroconductive hydrogels with a range of properties, paving the way for scaffolds that can meet the requirements of different electroresponsive tissues.
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- 2017
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42. Correction to “Machine Learning Color Feature Analysis of a High Throughput Nanoparticle Conjugate Sensing Assay
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Bennett, Danielle, Chen, Xueqian, Walker, Gregory J., Mehdipour, Milad, Stelzer-Braid, Sacha, Rawlinson, William D., Hibbert, D. Brynn, Tilley, Richard D., and Gooding, J. Justin
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- 2023
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43. Colloidal silicon quantum dots: from preparation to the modification of self-assembled monolayers for bioimaging and sensing applications
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Osiński, Marek, Parak, Wolfgang J., Liang, Xing-Jie, Cheng, Xiaoyu, McVey, Benjamin F. P., Robinson, Andrew B., Longatte, Guillaume, O’Mara, Peter B., Tan, Vincent T. G., Thordarson, Pall, Tilley, Richard D., Gaus, Katharina, and Gooding, J. Justin
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- 2017
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44. Pair correlation microscopy reveals the role of nanoparticle shape in intracellular transport and site of drug release
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Hinde, Elizabeth, Thammasiraphop, Kitiphume, Duong, Hien T. T., Yeow, Jonathan, Karagoz, Bunyamin, Boyer, Cyrille, Gooding, J. Justin, and Gaus, Katharina
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Nanoparticle size, surface charge and material composition are known to affect the uptake of nanoparticles by cells. However, whether nanoparticle shape affects transport across various barriers inside the cell remains unclear. Here we used pair correlation microscopy to show that polymeric nanoparticles with different shapes but identical surface chemistries moved across the various cellular barriers at different rates, ultimately defining the site of drug release. We measured how micelles, vesicles, rods and worms entered the cell and whether they escaped from the endosomal system and had access to the nucleus via the nuclear pore complex. Rods and worms, but not micelles and vesicles, entered the nucleus by passive diffusion. Improving nuclear access, for example with a nuclear localization signal, resulted in more doxorubicin release inside the nucleus and correlated with greater cytotoxicity. Our results therefore demonstrate that drug delivery across the major cellular barrier, the nuclear envelope, is important for doxorubicin efficiency and can be achieved with appropriately shaped nanoparticles.
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- 2017
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45. Machine Learning Color Feature Analysis of a High Throughput Nanoparticle Conjugate Sensing Assay
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Bennett, Danielle, Chen, Xueqian, Walker, Gregory J., Stelzer-Braid, Sacha, Rawlinson, William D., Hibbert, D. Brynn, Tilley, Richard D., and Gooding, J. Justin
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Plasmonic nanoparticles are finding applications within the single molecule sensing field in a “dimer” format, where interaction of the target with hairpin DNA causes a decrease in the interparticle distance, leading to a localized surface plasmon resonance shift. While this shift may be detected using spectroscopy, achieving statistical relevance requires the measurement of thousands of nanoparticle dimers and the timescales required for spectroscopic analysis are incompatible with point-of-care devices. However, using dark-field imaging of the dimer structures, simultaneous digital analysis of the plasmonic resonance shift after target interaction of thousands of dimer structures may be achieved in minutes. The main challenge of this digital analysis on the single-molecule scale was the occurrence of false signals caused by non-specifically bound clusters of nanoparticles. This effect may be reduced by digitally separating dimers from other nanoconjugate types. Variation in image intensity was observed to have a discernible impact on the color analysis of the nanoconjugate constructs and thus the accuracy of the digital separation. Color spaces wherein intensity may be uncoupled from the color information (hue, saturation, and value (HSV) and luminance, a* vector, and b* vector (LAB) were contrasted to a color space which cannot uncouple intensity (RGB) to train a classifier algorithm. Each classifier algorithm was validated to determine which color space produced the most accurate digital separation of the nanoconjugate types. The LAB-based learning classifier demonstrated the highest accuracy for digitally separating nanoparticles. Using this classifier, nanoparticle conjugates were monitored for their plasmonic color shift after interaction with a synthetic RNA target, resulting in a platform with a highly accurate yes/no response with a true positive rate of 88% and a true negative rate of 100%. The sensor response of tested single stranded RNA (ssRNA) samples was well above control responses for target concentrations in the range of 10 aM–1 pM.
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- 2023
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46. Nanoconfinement Allows a Less Active Cascade Catalyst to Produce More C2+Products in Electrochemical CO2Reduction
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Somerville, Samuel V., O’Mara, Peter B., Benedetti, Tania M., Cheong, Soshan, Schuhmann, Wolfgang, Tilley, Richard D., and Gooding, J. Justin
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Enzymes with multiple distinct active sites linked by substrate channels combined with control over the solution environment near the active sites enable the formation of complex products from simple reactants via the confinement of intermediates. We mimic this concept to facilitate the electrochemical carbon dioxide reduction reaction using nanoparticles with a core that produces intermediate CO at different rates and a porous copper shell. CO2reacts at the core to produce CO which then diffuses through the Cu to give higher order hydrocarbon molecules. By altering the rate of CO2delivery, the activity of the CO producing site, and the applied potential, we show that the nanoparticle with lower activity for CO formation produces greater amounts of hydrocarbon products. This is attributed to a combination of higher local pH and the lower amount of CO, resulting in more stable nanoparticles. However, when lower amounts of CO2were delivered to the core, the particles that are more active for CO formation produce more C3products. The importance of these results is twofold. They show that in cascade reactions, more active intermediate producing catalysts do not necessarily give greater amounts of high-value products. The effect an intermediate producing active site has on the local solution environment around the secondary active site plays an important role. As the less active catalyst for producing CO also possesses greater stability, we show that nanoconfinement can be used to get the best of both worlds with regard to having a stable catalyst with high activity.
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- 2023
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47. Advances in 3D Bioprinting for Cancer Biology and Precision Medicine: From Matrix Design to Application
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Jung, MoonSun, Ghamrawi, Sarah, Du, Eric Y., Gooding, J. Justin, and Kavallaris, Maria
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The tumor microenvironment is highly complex owing to its heterogeneous composition and dynamic nature. This makes tumors difficult to replicate using traditional 2D cell culture models that are frequently used for studying tumor biology and drug screening. This often leads to poor translation of results between in vitro and in vivo and is reflected in the extremely low success rates of new candidate drugs delivered to the clinic. Therefore, there has been intense interest in developing 3D tumor models in the laboratory that are representative of the in vivo tumor microenvironment and patient samples. 3D bioprinting is an emerging technology that enables the biofabrication of structures with the virtue of providing accurate control over distribution of cells, biological molecules, and matrix scaffolding. This technology has the potential to bridge the gap between in vitro and in vivo by closely recapitulating the tumor microenvironment. Here, a brief overview of the tumor microenvironment is provided and key considerations in biofabrication of tumor models are discussed. Bioprinting techniques and choice of bioinks for both natural and synthetic polymers are also outlined. Lastly, current bioprinted tumor models are reviewed and the perspectives of how clinical applications can greatly benefit from 3D bioprinting technologies are offered. 3D bioprinting enables the creation of 3D tumor‐like constructs in the laboratory by loading a mixture of cells and biomaterials. This review provides an overview of key considerations of the complex tumor microenvironment and matrix design when developing 3D tumor models. In this review, 3D bioprinted tumor models that are developed are highlighted and the main challenges for their clinical application discussed.
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- 2022
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48. Stability of Chemically Passivated Silicon Electrodes in Aqueous Solutions: Interplay between Bias Voltage and Hydration of the Electrolyte
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Gonçales, Vinicius R., Wu, Yanfang, Gupta, Bakul, Parker, Stephen G., Yang, Ying, Ciampi, Simone, Tilley, Richard, and Gooding, J. Justin
- Abstract
Chemical passivation of nonoxide semiconductors is a key prerequisite for electrochemical devices that operate in water-based electrolytes. Silicon remains the technologically most important material and organic monolayers based on the hydrosilylation of 1-alkynes have been shown to be a very effective approach to limit the thermodynamically favorable oxidation of the electrode, while still retaining efficient electron transfer across the solid/liquid interface. A large excess of a supporting electrolyte is always added to the solution in order to confine the applied potential gradient to the region close to the surface of the electrode. However, little is known about how the degree of solvation of the electrolyte species is linked to the degradation of the passivating chemistry. Here we test experimentally how electrolytes with different intrinsic hydration levels can influence the protection of the silicon as a function of surface biasing. X-ray photoelectron spectroscopy and contact angle experiments are used to determine under which conditions the chemical protection breaks down and oxidation of the silicon begins. Our results suggest that (i) anions seem to have a bigger impact on the growth of oxide than cations and (ii) the surface chemistry is more effective for protecting the semiconductor surface against oxidation in the presence of weakly hydrated ions. The utilization of strongly hydrated ions as the electrolyte dramatically diminishes the potential range in which the organic monolayer protects the silicon in aqueous environments.
- Published
- 2016
- Full Text
- View/download PDF
49. Light-Induced Hydrogel Based on Tumor-Targeting Mesoporous Silica Nanoparticles as a Theranostic Platform for Sustained Cancer Treatment
- Author
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Chen, Xin, Liu, Zhongning, Parker, Stephen G., Zhang, Xiaojin, Gooding, J. Justin, Ru, Yanyan, Liu, Yuhong, and Zhou, Yongsheng
- Abstract
Herein, we report a facile fabrication of a polymer (azobenzene and α-cyclodextrin-functionalized hyaluronic acid) and gold nanobipyramids (AuNBs) conjugated mesoporous silica nanoparticles (MSNs) to be used as an injectable drug delivery system for sustained cancer treatment. Because of the specific affinity between the hyaluronic acid (HA) on MSNs and the CD44 antigen overexpressed on tumor cells, the MSNs can selectively attach to tumor cells. The nanocomposite material then exploits thermoresponsive interactions between α-cyclodextrin and azobenzene, and the photothermal properties of gold nanobipyramids, to in situ self-assemble into a hydrogel under near-infrared (NIR) radiation. Upon gelation, the drug (doxorubicin)-loaded MSNs carriers were enclosed in the HA network of the hydrogel, whereas further degradation of the HA in the hydrogel due to the upregulation of hyaluronidase (HAase) around the tumor tissue will result in the release of MSNs from the hydrogel, which can then be taken by tumor cells and deliver their drug to the cell nuclei. This design is able to provide a microenvironment with rich anticancer drugs in, and around, the tumor tissue for time periods long enough to prevent the recrudescence of the disease. The extra efficacy that this strategy affords builds upon the capabilities of conventional therapies.
- Published
- 2016
- Full Text
- View/download PDF
50. Light-Activated Electrochemistry for the Two-Dimensional Interrogation of Electroactive Regions on a Monolithic Surface with Dramatically Improved Spatial Resolution
- Author
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Yang, Ying, Ciampi, Simone, Zhu, Ying, and Gooding, J. Justin
- Abstract
The concept of light-activated electrochemistry (LAE) was recently presented where faradaic electrochemistry could be spatially resolved on a monolithic silicon electrode by illuminating the specific region with light. A major implication from the previous study using illumination from the nonsolution side, or backside, is that the spatial resolution is limited by the finite thickness of silicon wafer. To overcome this restriction, and enable the further application of LAE, in combination with optical imaging for example, herein the spatial resolution of LAE using topside illumination (illumination from the solution side) is explored. The applied potential and irradiated light intensity are found to have significant effects on the spatial resolution. A spatial resolution of ∼30 μm was achieved with optimal parameters, which is a 20 times improvement compared with the previously reported backside illumination design, demonstrating the potential application of the strategy including microarray patterning of silicon or for single cell analysis.
- Published
- 2016
- Full Text
- View/download PDF
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