1. Gene Structure and Amino Acid Sequence of Latimeria chalumnae(Coelacanth) Myelin DM20: Phylogenetic Relation of the Fish
- Author
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Tohyama, Yoko, Kasama-Yoshida, Hiromi, Sakuma, Mitsuhiro, Kobayashi, Yoko, Cao, Ying, Hasegawa, Masami, Kojima, Hisako, Tamai, Yoichi, Tanokura, Masaru, and Kurihara, Tadashi
- Abstract
The structure of Latimeria chalumnae(coelacanth) proteolipid protein/DM20 gene excluding exon 1 was determined, and the amino acid sequence of LatimeriaDM20 corresponding to exons 2–7 was deduced. The nucleotide sequence of exon 3 suggests that only DM20 isoform is expressed in Latimeria.The structure of proteolipid protein/DM20 gene is well preserved among human, dog, mouse, and Latimeria.Southern blot analysis indicates that LatimeriaDM20 gene is a single-copy gene. When the amino acid sequences of DM20 were compared among various species, Latimeriawas more similar to tetrapods than other fishes including lungfish, confirming the previous finding by immunoreactivity (Waehneldt and Malotka 1989 J. Neurochem. 52:1941–1943). However, when phylogenetic trees were constructed from the DM20 sequences, lungfish was clearly the closest to tetrapods. Latimeriawas situated outside of lungfish by the maximum likelihood method. The apparent similarity of LatimeriaDM20 to tetrapod proteolipid protein/DM20 is explained by the slow amino acid substitution rate of LatimeriaDM20.
- Published
- 1999
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