1. A tRNA modification with aminovaleramide facilitates AUA decoding in protein synthesis
- Author
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Miyauchi, Kenjyo, Kimura, Satoshi, Akiyama, Naho, Inoue, Kazuki, Ishiguro, Kensuke, Vu, Thien-Son, Srisuknimit, Veerasak, Koyama, Kenta, Hayashi, Gosuke, Soma, Akiko, Nagao, Asuteka, Shirouzu, Mikako, Okamoto, Akimitsu, Waldor, Matthew K., and Suzuki, Tsutomu
- Abstract
Modified tRNA anticodons are critical for proper mRNA translation during protein synthesis. It is generally thought that almost all bacterial tRNAsIleuse a modified cytidine—lysidine (L)—at the first position (34) of the anticodon to decipher the AUA codon as isoleucine (Ile). Here we report that tRNAsIlefrom plant organelles and a subset of bacteria contain a new cytidine derivative, designated 2-aminovaleramididine (ava2C). Like L34, ava2C34 governs both Ile-charging ability and AUA decoding. Cryo-electron microscopy structural analyses revealed molecular details of codon recognition by ava2C34 with a specific interaction between its terminal amide group and an mRNA residue 3′-adjacent to the AUA codon. These findings reveal the evolutionary variation of an essential tRNA modification and demonstrate the molecular basis of AUA decoding mediated by a unique tRNA modification.
- Published
- 2024
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