1. Sugar transporter proteins in Capsicum: identification, characterization, evolution and expression patterns
- Author
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Wei, Huawei, Liu, Jia, Zheng, Jiaqiu, Zhou, Rong, Cheng, Yuan, Ruan, Meiying, Ye, Qingjing, Wang, Rongqing, Yao, Zhuping, Zhou, Guozhi, Deng, Minghua, Chen, Yougen, and Wan, Hongjian
- Abstract
AbstractSugar transporter proteins (STPs) play an important role in plant growth and development and stress resistance. Pepper (Capsicum annuumL.) is a significant economic crop and is widely cultivated worldwide. However, the evolution and the roles of STPgenes in the growth and development and in coping with abiotic stresses in pepper are poorly known. Here, we characterized STPgene family in pepper through integration of chromosomal location, gene structure, conserved motif, phylogeny, expression patterns in different tissues and abiotic stresses. Using bioinformatics-based methods, we identified 17 putative STPgenes in pepper. Chromosome mapping indicated that they are unevenly distributed on 9 chromosomes and there are tandem duplication events. Gene structure analysis revealed that intron numbers among these CaSTPgenes ranged from 2 to 5, except that CaSTP12and CaSTP13genes contained no introns. The phylogenetic tree of STPgenes from pepper and other plant species revealed that STPgenes were grouped into 4 subfamilies, suggesting that these gene subfamilies may have diverged from a single common ancestor prior to the mono-dicot split. Gene expression analysis based on RNA-seq data showed that three genes were expressed constitutively in all the tissues analyzed, implying that these genes might have specific function in pepper. Stress data analysis showed that the expression profiles of some members of the CaSTPgene family were altered under cold, heat, salt and hormone stress conditions. The present results will provide valuable information into the evolutionary relationships and functional divergence of the STPfamily in the future.
- Published
- 2020
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