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Coastal urbanization and the consequent proliferation of artificial structures greatly impact rocky reef communities, productive and diverse marine environments that play a crucial role in the functioning of broader coastal ecosystems. This study, conducted along a 7 km stretch of coastline at increasing distance from the port of Genoa (Ligurian Sea), investigated whether the alternating presence of artificial and natural reefs leads to discernible differences in the biota inhabiting these two reef types. The study area is one of the most anthropized areas of the Mediterranean Sea, exhibiting nearly 60% coastal artificialization, which severely impacts coastal ecosystems, favouring the replacement of sensitive species with more tolerant species. Ten reefs (5 natural and 5 artificial) were surveyed by scuba diving at about a 6-m depth, employing quadrats of 50 cm × 50 cm to estimate visually the percent cover of conspicuous sessile organisms. The artificial reefs hosted a similar number of species (18) to their natural counterparts (19) but exhibited a distinct community composition: the former were especially characterized by Jania rubens and filamentous algae, with the latter characterized by Peyssonnelia squamaria and Mesophyllum lichenoides. This difference, however, became negligible where coastal habitat fragmentation (here measured with a purposely devised Fragmentation Index) was minimal. Reducing fragmentation may therefore represent a management strategy to minimize the potential impact of artificial structures on marine biodiversity. [ABSTRACT FROM AUTHOR]

Global warming is causing poleward expansion of species ranges. Temperate seas, in particular, are undergoing a process known as 'tropicalisation', i.e., the combination of sea-water warming and establishment of southern species. The Ligurian Sea is one of the coldest sectors of the Mediterranean and has thus been characterized by a dearth of warm-temperate species and a comparative abundance of cold-temperate species. This paper uses a time series of sea surface temperature (SST) and new records of thermophilic fish species to reconsider the biogeography of the Ligurian Sea. SST has risen by about 0.7 °C on average between 1948 and 2023, but two phases may be distinguished: a cool one (ended in the mid-1980s) and a warm one (still ongoing); the latter phase shows alternating periods of rapid warming and comparatively stationary temperature. The arrival of thermophilic species coincided with the periods of rapid warming; some of these species were established in the subsequent stationary periods. Heatwaves and climate-related diseases associated with the periods of rapid warming have caused mass mortalities of autochthonous species. Our knowledge on the biogeography of the Ligurian Sea was established during the cool phase; the present situation, however, calls for re-defining the chorological spectrum of the Ligurian Sea biota. [ABSTRACT FROM AUTHOR]

In the Mediterranean Sea, the bivalve genus Pinna is represented by two species: the endemic Pinna nobilis and the (sub)tropical Atlantic Pinna rudis. P. rudis is generally less common and mostly restricted to the warmer regions of the western Mediterranean. However, since a mass mortality event, caused by a pathogen infection, has brought P. nobilis to the brink of extinction, records of P. rudis have increased in several Mediterranean regions, where it had not been previously observed. This paper reports on the presence of several P. rudis individuals in the Ligurian Sea, the northernmost reach of this species in the western Mediterranean. P. rudis has become increasingly common between 2021 and 2023, with a total of 28 new records from seven localities along the Ligurian coast. The size of the individuals and their estimated growth rate (3.6 cm·a−1) indicated that a recruitment event most likely took place in summer 2020, when P. nobilis was no longer present in the area. Our observations suggest that the recruitment success of P. rudis increased following the decline of P. nobilis. However, considering the thermophilic nature of P. rudis, in all likelihood, the ongoing water warming is playing a crucial role in the successful establishment of this species in the Ligurian Sea. A full understanding of the recent range expansion of P. rudis in the Mediterranean is far from being achieved, and whether P. rudis will be able to fulfil the ecological role of P. nobilis is difficult to predict. Large scale monitoring remains the only effective way to know about the future of Pinnids in the Mediterranean Sea. [ABSTRACT FROM AUTHOR]

Coral reefs are exposed worldwide to several global and local human pressures including climate change and coastal development. Assessing the effects of such pressures on coral reef communities and the changes they undergo over time is mandatory to understand their possible future trends. Nonetheless, some coral reefs receive no or little scientific attention, as in the case of Huvadhoo Atoll that is an under-studied region in the southernmost area of the Maldives (Indian Ocean). This study analyzes the changes occurring over time in eight coral reefs (four inner reefs within the atoll lagoon and four outer reefs on the ocean side) at Huvadhoo Atoll, firstly surveyed in 2009 and revisited in 2020 using the same field methods. The cover of 23 morphological benthic descriptors (including different growth forms of Acropora) was taken into account and then grouped into three categories (i.e., hard coral, other benthic taxa and abiotic descriptors) to analyze the change in the composition of the coral reef community. Significant changes (e.g., increase in hard coral cover and decrease in abiotic descriptors) were observed in the inner reefs as compared to the outer reefs, which showed less variability. A significant decrease in tabular Acropora cover was observed in both inner and outer reefs, with possible negative effects on reef complexity and functioning. By comparing two time periods and two reef types, this study provides novel information on the change over time in the community composition of Maldivian coral reefs. [ABSTRACT FROM AUTHOR]

Climate change is affecting rocky reef ecosystems in a multitude of ways at global scale. During summer 2018, the rocky reef communities of Portofino Marine Protected Area (MPA) (NW Mediterranean) were affected by thermal anomalies, a mucilaginous event, and the seasonal expansion of Caulerpa cylindracea. Moreover, a severe storm occurred on 29 October. The effects of these pressures on the rocky reef communities were analysed at different depths (10 m, 20 m, 30 m, and 40 m) and at three times (June, October, December) to evaluate change at short temporal scale. Portofino MPA's communities have significantly changed: thermal anomalies mostly affected the biota living above the summer thermocline (ca 20 m depth); mucilaginoius aggregates first impacted the communities in shallow waters and only later those in deep waters, where they typically fall in late summer; the greatest impact by Caulerpa cylindracea was detected at 20 m depth; the storm directly impacted communities in shallow and intermediate waters by uprooting algal species, while it had indirect effects at greater depths through sediment redistribution. Disentangling the effects of multiple pressures on coastal ecosystems is one of the most pressing goals in marine ecology and biodiversity conservation. This study represents an attempt in this direction as applied to the short-term dynamics of rocky reef communities under a climate change scenario. [ABSTRACT FROM AUTHOR]

Decapod crustaceans are important components of the fauna of marine caves worldwide, yet information on their ecology is still scarce. Mediterranean marine caves are perhaps the best known of the world and may offer paradigms to the students of marine cave decapods from other geographic regions. This review summarizes and updates the existing knowledge about the decapod fauna of Mediterranean marine caves on the basis of a dataset of 76 species from 133 caves in 13 Mediterranean countries. Most species were found occasionally, while 15 species were comparatively frequent (found in at least seven caves). They comprise cryptobiotic and bathyphilic species that only secondarily colonize caves (secondary stygobiosis). Little is known about the population biology of cave decapods, and quantitative data are virtually lacking. The knowledge on Mediterranean marine cave decapods is far from being complete. Future research should focus on filling regional gaps and on the decapod ecological role: getting out at night to feed and resting in caves during daytime, decapods may import organic matter to the cave ecosystem. Some decapod species occurring in caves are protected by law. Ecological interest and the need for conservation initiatives combine to claim for intensifying research on the decapod fauna of the Mediterranean Sea caves. [ABSTRACT FROM AUTHOR]

Detailed knowledge about the distribution of species in need of protection is required for the management of Marine Protected Areas, a major tool to reduce marine biodiversity loss. Such knowledge is deficient for most marine invertebrates.Axinella polypoides is a marine sponge included on the list of protected species by the Barcelona Convention (1976) and the Bern Convention (1987). This large and erect species has an important ecological role in habitat forming and benthic–pelagic coupling.Bathymetrical, geographical and ecological data over the last 60 years were collated from publications and reports, together with new surveys to assess the distribution and protection status in Liguria of A. polypoides. It identified a more widespread distribution than previously thought, which points at a general need for dedicated investigations on the occurrence of species that require protection.Bathymetrical distribution was trimodal, with peaks corresponding to different geomorphological settings: coastal cliff bases (around 38 m depth), inner shelf shoals (52 m) and rocks amidst coarse sediment on the outer shelf (79 m). Density was significantly greater at the shallowest depths. The species was mostly found in the coralligenous biocoenosis, in association with other characteristic species or forming a monospecific facies.On (sub)vertical cliffs, A. polypoides often exhibited an unusual cane shape, rather than the typical bushy morphology, thus causing confusion with the congeneric A. cannabina, a more southern species. Records of the latter in the Ligurian Sea therefore need confirmation.Only a minority (22.6%) of A. polypoides records were in Marine Protected Areas, the remainder being located in areas with no current environmental protection plans in place. While the occurrence of this species in MPAs remained stable over the decades, the only quantitative historical data available indicated that populations in non‐protected areas were declining owing to anthropogenic impacts (fishing and anchoring). [ABSTRACT FROM AUTHOR]

This study investigates the bottlenose dolphin (Tursiops truncatus, Montagu 1821) habitat use in the Portofino marine protected area (NW Italy) and adjacent waters, a core area for the dolphins and a highly touristic area in the Mediterranean Sea. A permanent automated real-time passive acoustic monitoring system, able to detect and track dolphins continuously, was tested in the area within the activities of the Life+ Nature project ARION. The habits of bottlenose dolphins was investigated considering the resident rate inside the area, which quantifies the amount of time dolphins spent in these waters, by means of random forest regression. The dependency of dolphin resident rate was analyzed in relation to four explanatory variables: sea surface temperature, season, time of day, and proximity to the coast. Dolphins spent more time in the area during spring and when sea surface temperature ranged between 15–16°C. Summer resulted the season with lower dolphin residency with significant difference between working day and weekend, in the last the lowest residency was recorded. Main findings provide important information to properly manage the area in order to protect bottlenose dolphins. [ABSTRACT FROM AUTHOR]

Coralligenous reefs represent one of the most important coastal ecosystems of the Mediterranean Sea, and their ecological quality must be assessed under the Marine Strategy Framework Directive to evaluate seafloor integrity. An effective standardized monitoring protocol is urgently needed in order to compare data at the Mediterranean scale and to plan efficient management and intervention programmes.This paper aims to: (a) review methods used to study shallow coralligenous reefs to propose a method able to optimize sampling effort; (b) select the most effective ecological descriptors to evaluate the responses of coralligenous assemblages to anthropogenic stress; and (c) synthesize available information in an integrated and standardized procedure.Ninety‐five scientific papers dealing with shallow coralligenous reefs were found. Among these, 52 papers reporting detailed descriptions about sampling methods were selected to identify methodologies and ecological descriptors suitable for monitoring purposes.Downstream of the bibliographic review, an integrated and standardized procedure, named STAR (STAndaRdized coralligenous evaluation procedure), was proposed to assess the ecological quality of coralligenous reefs.STAR was tested on coralligenous reefs at 12 sites, six of them subjected to high human pressure and six located in areas characterized by low human pressure.Significant differences between the two conditions were detected for all the ecological descriptors selected, thus confirming the effectiveness of STAR in the assessment of ecological quality of coralligenous reefs. [ABSTRACT FROM AUTHOR]

Global climate change has increased the frequency and intensity of extreme heat anomalies and consequent mass coral bleaching events. Long‐term dynamics of hard coral cover, bioconstruction potential, carbonate deposition, and reef accretion was monitored over a 20‐year period on Maldivian coral reefs in order to investigate the effects of high‐temperature anomalies on coral reef accretion and their recovery potential. Changes experienced by shallow reefs between 1997 and 2017 were evaluated by considering five different bioconstructional guilds and the BioConstruction Potential index (BCP), a proxy for the constructional capacity of reefs. Abnormally high temperatures in 1998 and 2016 led to severe coral bleaching and consequent mortality, especially of the primary builders. Renewed carbonate deposition was not documented until 2–3 years after the bleaching, and 6–9 years passed until constratal (i.e., low relief) growth was achieved. Finally, 14–16 years were required to reach accretion rates high enough to ensure superstratal (i.e., high relief) growth. Coral mortality in the Maldives during the 2016 bleaching event was lower than in 1998, and the initial recovery was faster and occurred via a different trajectory than in 1998. Rising levels of anthropogenic carbon emissions are predicted to accelerate sea level rise and trigger severe coral bleaching events at least twice per decade, a frequency that will (a) prevent coral recovery, (b) nullify reef accretion, and consequently, (c) result in the drowning of Maldivian reefs under the worst climate projections. Long term dynamics of hard coral cover, bioconstruction potential, carbonate deposition, and reef accretion were monitored over a 20‐year period on Maldivian coral reefs in order to investigate the effects of high‐temperature anomalies on coral reefs and their recovery potential. Abnormally high temperatures in 1998 and 2016 led to severe coral bleaching and consequent mortality, especially of the primary builders. Renewed carbonate deposition was not documented until 2–3 years after the bleaching, 6–9 years passed until constratal (low relief) growth was achieved, and 14–16 years were required to reach accretion rates high enough to ensure superstratal (high relief) growth. [ABSTRACT FROM AUTHOR]

Marine Protected Areas (MPAs) are a major tool to conserve marine ecosystems but are also strongly attractive to tourists, the increased numbers of which can cause environmental issues if not properly managed.Proposing an MPA and then failing to establish it risks advertising the beauty of a marine area without managing the unavoidable increase in tourism. This is what happened at Gallinara Island (Ligurian Sea, north‐western Mediterranean), where an MPA was proposed in 1990 but has not yet been established.Benthic data collected soon after the proposal (1990–92) have been compared with similar information obtained in subsequent periods (2009 and 2016): change has been assessed both visually and statistically, using multivariate and univariate techniques.The Gallinara sea floor supported five epibenthic communities in 1991, four of which corresponded to European Nature Information System (EUNIS) habitats; the fifth epibenthic community, characterized by the erect sponge Axinella polypoides, should be included in the next revision of EUNIS.In the 25 years since the original MPA proposal, all epibenthic communities have exhibited a reduction in their three‐dimensional structure and biotic homogenization, and severe decreases in species diversity, and the sea floor has been littered with derelict fishing gear and other waste from boats.In absence of the MPA, proposals to develop a management plan for a marine Site of Community Importance (SCI) have been provided, to reduce sea‐based human pressures. The dramatic alteration of Gallinara sea floor after 25 years of negligence and inaction is a sad warning for other unmanaged yet beautiful natural areas within urbanized regions of the world. [ABSTRACT FROM AUTHOR]

The availability of marine habitats maps remains limited due to difficulty and cost of working at sea. Reduced light penetration in the water hampers the use of optical imagery, and acoustic methods require extensive sea-truth activities. Predictive spatial modelling may offer an alternative to produce benthic habitat maps based on complete acoustic coverage of the seafloor together with a comparatively low number of sea truths. This approach was applied to the coralligenous reefs of the Marine Protected Area of Tavolara - Punta Coda Cavallo (NE Sardinia, Italy). Fuzzy clustering, applied to a set of observations made by scuba diving and used as sea truth, allowed recognising five coralligenous habitats, all but one existing within EUNIS (European Nature Information System) types. Variable importance plots showed that the distribution of habitats was driven by distance from coast, depth, and lithotype, and allowed mapping their distribution over the MPA. Congruence between observed and predicted distributions and accuracy of the classification was high. Results allowed calculating the occurrence of the distinct coralligenous habitats in zones with different protection level. The five habitats are unequally protected since the protection regime was established when detailed marine habitat maps were not available. A SWOT (Strengths-Weaknesses-Opportunities-Threats) analysis was performed to identify critical points and potentialities of the method. The method developed proved to be reliable and the results obtained will be useful when modulating on-going and future management actions in the studied area and in other Mediterranean MPAs to develop conservation efforts at basin scale. [ABSTRACT FROM AUTHOR]

Global warming is facilitating the poleward range expansion of plant and animal species. In the Mediterranean Sea, the concurrent temperature increase and abundance of (sub)tropical non-indigenous species (NIS) is leading to the so-called ‘tropicalization’ of the Mediterranean Sea, which is dramatically evident in the south-eastern sectors of the basin. At the same time, the colder north-western sectors of the basin have been said to undergo a process of ‘meridionalization’, that is the establishment of warm-water native species (WWN) previously restricted to the southern sectors. The Gulf of Genoa (Ligurian Sea) is the north-western reach for southern species of whatever origin in the Mediterranean. Recent (up to 2015) observations of NIS and WWN by diving have been collated to update previous similar inventories. In addition, the relative occurrences of both groups of southern species have been monitored by snorkelling between 2009 and 2015 in shallow rocky reefs at Genoa, and compared with the trend in air and sea surface temperatures. A total of 20 southern species (11 NIS and 9 WWN) was found. Two WWN (the zebra seabream Diplodus cervinus and the parrotfish Sparisoma cretense) and three NIS (the SW Atlantic sponge Paraleucilla magna, the Red Sea polychaete Branchiomma luctuosum, and the amphi-American and amphi-Atlantic crab Percnon gibbesi) are new records for the Ligurian Sea, whereas juveniles of the Indo-Pacific bluespotted cornetfish Fistularia commersonii have been found for the first time. While temperature has kept on increasing for the whole period, with 2014 and 2015 being the warmest years since at least 1950, the number of WWN increased linearly, that of NIS increased exponentially, contradicting the idea of meridionalization and supporting that of tropicalization even in the northern sectors of the Mediterranean basin. [ABSTRACT FROM PUBLISHER]

1. This study compared the results obtained through the concurrent use of the two indices ESCA (Ecological Status of Coralligenous Assemblages) and COARSE (COralligenous Assessment by ReefScape Estimate) to define the ecological status of coralligenous reefs. 2. The study evaluated: i) the effectiveness of the two indices at a regional spatial scale (100 s of km); ii) the descriptors that mostly influence the indices; and iii) the ecological information provided by the two indices. 3. Both ESCA and COARSE were applied to coralligenous reefs selected at sites affected by different human-induced pressures. 4. The two indices provided different but complementary information to determine the intrinsic quality of coralligenous reefs and to detect the effects of human pressures on the associated assemblages. 5. The simultaneous use of ESCA and COARSE can be effective in providing information about the alteration of ecological quality of coralligenous reefs, in order to achieve the requirements of European directives. [ABSTRACT FROM AUTHOR]

A new method based on photographic sampling coupled with in situ observations was applied to 53 stations along the French Mediterranean coast, to assess the integrity of coralligenous reefs affected by different levels of anthropogenic pressure. The conservation state of the assemblages characterizing these habitats was then assessed by an index – the INDEX-COR – that integrates three metrics: (i) the sensitivity of the taxa to organic matter and sediment deposition, (ii) the observable taxonomic richness, and (iii) the structural complexity of the assemblages. The sensitivity of INDEX-COR was tested and showed good correlation with the Level of Pressure calculated for each station according to expert judgment and field observations. [ABSTRACT FROM AUTHOR]

Global climate change is affecting the planet’s biodiversity, altering marine ecosystems and modifying species distributions. Using historical and recently collected data, changes in depth distribution of two hydrozoan taxa (Ectopleura croceaandMilleporaspp.) with different life histories, ecology and geographic distributions were compared to trends in sea surface temperature (SST).Ectopleura crocea, a temperate species, used to be very common in Italian seas on shallow water artificial substrata, where it settled mainly between spring and autumn. In the Maldives, three species of the tropical hydrocoralMillepora(M. platyphylla,M. latifoliaandM. tenera) were reported as common from the early 20th century until recently.Milleporaunderwent mass mortality during a bleaching event linked to a thermal positive anomaly caused by El Niño and lasting from April to July, 1998. Similarly,E. croceadisappeared from Italian surface waters where it was once abundant. Both the temperate and the tropical hydrozoans survived at moderate depth and recolonized shallow water habitats in recent years. These two hydrozoan examples support the depth refugia hypothesis, according to which marine organisms may shift to deeper habitats to avoid shallow water heatwaves and increased temperature variability. Return to shallow water has been possible only after acclimation such as shifting season of occurrence from summer to winter–spring (E. croceain Italian seas) or possibly through species replacement (Milleporain the Maldives). Continued field research is needed to understand and evaluate the effect of climate change on marine species distribution. [ABSTRACT FROM PUBLISHER]

Paracoryne huveiis a rare encrusting hydrozoan living in the intertidal zone of the North-western Mediterranean Sea, from the Catalan coast to the Ligurian Sea. In 2014, a large bloom ofP. huveiwas recorded along the cliffs of the Marine Protected Area ‘Isola di Bergeggi’ (Ligurian Sea). The species has shown densities related to important biomass values never previously recorded (wet weight as high as 1600 g m−2), creating a continuous belt up to 1 m wide from February to April. At an increasing distance from the promontory, the species decreased in abundance, assuming a spotted aspect comparable to the colonies recorded by earlier researchers. In the Bergeggi area, the species has exhibited an almost complete cover of the lower intertidal zone, and for the first time it was recorded in the infralittoral and upper intertidal zone and in tide pools, demonstrating a wider range of habitat than had previously been observed. The life cycle appeared significantly shorter than cycles reported in earlier literature, and this phenomenon has been compared with similar observations from other shallow water hydrozoans in the same area. The abundance of the species was continually monitored in 2015–2016 to help assess the inter-annual variations in relation to temperature and rainfall trends and, indirectly, to competition with other species. Finally, a comparison of the 59 years of scattered data of occurrence in the literature has shownP. huveito be a strict stenothermal species, reported only in winters characterized by average temperatures. [ABSTRACT FROM PUBLISHER]

Marine coastal ecosystems are affected by a vast array of human-induced disturbances and stresses, which are often capable of overwhelming the effects of natural changes. Despite the conceptual and practical difficulty in differentiating between disturbance and stress, which are often used interchangeably, the two terms bear different ecological meanings. Both are external agents, but the former causes mortality or physical damage (subtraction of biomass), whereas the latter causes physiological alteration (reduction in productivity). Sensitivity of marine organisms may thus have a dual connotation, being influenced in different ways by disturbance and by stress following major environmental change. Coralligenous assemblages, which shape unique biogenic formations in the Mediterranean Sea, are considered highly sensitive to change. In this paper, we propose a method to differentiate between disturbance and stress to assess the ecological status of the coralligenous assemblages. Disturbance sensitivity level (DSL) and stress sensitivity level (SSL) of the sessile organisms thriving in the coralligenous assemblages were combined into the integrated sensitivity level of coralligenous assemblages (ISLA) index. Changes in the coralligenous status were assessed in space, along a gradient of stress (human-induced pressures) at several sites of the western Mediterranean, and in time, from a long-term series (1961–2008) at Mesco Reef (Ligurian Sea) that encompasses a mass mortality event in the 1990s. The quality of the coralligenous assemblages was lower in highly urbanised sites than that in sites in both marine protected areas and areas with low levels of urbanisation; moreover, the quality of the assemblages at Mesco Reef decreased during the last 50 years. Reduction in quality was mainly due to the increase in stress-tolerant and/or opportunist species (e.g. algal turfs, hydroids and encrusting sponges), the disappearance of the most sensitive macroalgae (e.g. Udoteaceae and erect Rhodophyta) and macro-invertebrates (e.g. Savalia savaglia , Alcyonium coralloides and Smittina cervicornis ), and the appearance of invasive alien algal species. Although the specific indices of SSL or DSL well illustrated the changes in the spatial or temporal datasets, respectively, their integration in the ISLA index was more effective in measuring the change experienced by the coralligenous assemblages in both space and time. [ABSTRACT FROM AUTHOR]

A conceptual model was constructed for the functioning the algae-dominated rocky reef ecosystem of the Mediterranean Sea. The Ecosystem-Based Quality Index (reef-EBQI) is based upon this model. This index meets the objectives of the EU Marine Strategy Framework Directive. It is based upon (i) the weighting of each compartment, according to its importance in the functioning of the ecosystem; (ii) biological parameters assessing the state of each compartment; (iii) the aggregation of these parameters, assessing the quality of the ecosystem functioning, for each site; (iv) and a Confidence Index measuring the reliability of the index, for each site. The reef-EBQI was used at 40 sites in the northwestern Mediterranean. It constitutes an efficient tool, because it is based upon a wide set of functional compartments, rather than upon just a few species; it is easy and inexpensive to implement, robust and not redundant with regard to already existing indices. [ABSTRACT FROM AUTHOR]

The dearth of long-time series hampers the measurement of the ecosystem change that followed the global marine climate shift of the 1980–90s. The sessile communities of Portofino Promontory reefs (Ligurian Sea, NW Mediterranean) have been discontinuously studied since the 1950s. Collating information from various sources, three periods of investigations have been distinguished: 1) 1950–70s; 2) 1980–90s; 3) 2000–10s. A cooler phase in time 1 was followed by a rapid warming in time 2, to stabilize at about 0.5 °C higher in time 3. Human pressure grew impressively, especially after the establishment of a MPA in 1999. Multivariate analyses evidenced a major change of community composition in time 2. Some species disappeared or got rarer, many found refuge at depth, and among the newcomers there were recently introduced alien species. This study demonstrated the importance of descriptive historical data to understand magnitude and pattern of change in the long term evolution of marine ecosystems. [ABSTRACT FROM AUTHOR]

Marine caves are unique and vulnerable habitats, threatened by multiple global and local disturbances. Whilst the effects of climate change on marine caves have already been investigated, no information exists about the effects of local human impacts, such as coastal development, on these habitats. This study investigated the impact of the construction of a touristic harbour on two shallow underwater marine caves in the Ligurian Sea (NW Mediterranean). As a standard methodology for monitoring marine caves does not exist yet, changes over time on the benthic community were assessed adopting two different non-taxonomic descriptors: trophic guilds and growth forms. Harbour construction caused an increase of sediment load within the caves, with a consequent decline of filter feeder organisms. Abundance of small organisms, such as encrusting and flattened sponges, was greatly reduced in comparison to organisms with larger and erect growth forms, such as domed mounds and pedunculated sponges. Our study indicated that growth forms and trophic guilds are effective descriptors for evaluating changes over time in marine caves, and could be easily standardised and applied in monitoring plans. In addition, as the harbour construction impacted differently according to the cave topography, the use of a systematic sampling in different zones of an underwater cave is recommended. [ABSTRACT FROM AUTHOR]

Within the framework of the EU Life+ project named LIFE09 NAT/IT/000190 ARION, a permanent automated real-time passive acoustic monitoring system for the improvement of the conservation status of the transient and resident population of bottlenose dolphin (Tursiops truncatus) has been implemented and installed in the Portofino Marine Protected Area (MPA), Ligurian Sea. The system is able to detect the simultaneous presence of dolphins and boats in the area and to give their position in real time. This information is used to prevent collisions by diffusing warning messages to all the categories involved (tourists, professional fishermen and so on). The system consists of two gps-synchronized acoustic units, based on a particular type of marine buoy (elastic beacon), deployed about 1 km off the Portofino headland. Each one is equipped with a four-hydrophone array and an onboard acquisition system which can record the typical social communication whistles emitted by the dolphins and the sound emitted by boat engines. Signals are pre-filtered, digitized and then broadcast to the ground station via wi-fi. The raw data are elaborated to get the direction of the acoustic target to each unit, and hence the position of dolphins and boats in real time by triangulation. [ABSTRACT FROM AUTHOR]

The effects of global change are particularly serious in areas where range shifts of species are physically constrained such as the Ligurian Sea, which is one of the coldest sectors of the Mediterranean. In this basin, historical information on water temperature (from the sea surface down to 75 m depth) dates back to the 1950s. Early studies also recorded warm-water species occurrence. Thanks to these data we provide the first detailed characterization of water temperature variation from 1958 up to 2010 in the layer 0-75 m depth. We coupled this analysis with the available information on rocky reef epibenthic communities (literature review from 1955 to 1964 and field data from 1980 to 2010). The analysis of water temperature revealed several patterns of variation: a cooling phase from 1958 to 1980, a phase of rapid warming from 1980 to 1990 and a phase of slower warming from 1990 to 2010. Inter-annual variation in temperature increased over the entire period for the water layer down to 20 m. Warm-water native and alien species richness increased during the warming phases. Literature estimates suggest a decrease in warm-water native species richness during the cooling phase. The analysis of quantitative data collected in the early 1990s and late 2000s indicated a decrease in the cover of warm-water native species on shallow rocky reefs and an increase in deeper waters. We argue that increased inter-annual variation in water temperature may disadvantage native warm-water species in shallow waters. Our results indicate that the effect of temperature rises in cold, constrained basins may be more complex than the simple prediction of species changing their geographical range according to their thermal limits. [ABSTRACT FROM AUTHOR]

Coral reefs are degrading worldwide, but little information exists on their previous conditions for most regions of the world. Since 1989, we have been studying the Maldives, collecting data before, during and after the bleaching and mass mortality event of 1998. As early as 1999, many newly settled colonies were recorded. Recruits shifted from a dominance of massive and encrusting corals in the early stages of recolonisation towards a dominance of Acropora and Pocillopora by 2009. Coral cover, which dropped to less than 10% after the bleaching, returned to pre-bleaching values of around 50% by 2013. The 2004 tsunami had comparatively little effect. In 2014, the coral community was similar to that existing before the bleaching. According to descriptors and metrics adopted, recovery of Maldivian coral reefs took between 6 and 15 years, or may even be considered unachieved, as there are species that had not come back yet. [ABSTRACT FROM AUTHOR]

Understanding the effects of environmental change on ecosystems requires the identification of baselines that may act as reference conditions. However, the continuous change of these references challenges our ability to define the true natural status of ecosystems. The so-called sliding baseline syndrome can be overcome through the analysis of quantitative time series, which are, however, extremely rare. Here we show how combining historical quantitative data with descriptive ‘naturalistic’ information arranged in a chronological chain allows highlighting long-term trends and can be used to inform present conservation schemes. We analysed the long-term change of a coralligenous reef, a marine habitat endemic to the Mediterranean Sea. The coralligenous assemblages of Mesco Reef (Ligurian Sea, NW Mediterranean) have been studied, although discontinuously, since 1937 thus making available both detailed descriptive information and scanty quantitative data: while the former was useful to understand the natural history of the ecosystem, the analysis of the latter was of paramount importance to provide a formal measure of change over time. Epibenthic assemblages remained comparatively stable until the 1990s, when species replacement, invasion by alien algae, and biotic homogenisation occurred within few years, leading to a new and completely different ecosystem state. The shift experienced by the coralligenous assemblages of Mesco Reef was probably induced by a combination of seawater warming and local human pressures, the latter mainly resulting in increased water turbidity; in turn, cumulative stress may have favoured the establishment of alien species. This study showed that the combined analysis of quantitative and descriptive historical data represent a precious knowledge to understand ecosystem trends over time and provide help to identify baselines for ecological management. [ABSTRACT FROM AUTHOR]

Biodiversity is a portmanteau word to indicate the variety of life at all levels from genes to ecosystems, but it is often simplistically equated to species richness; the word ecodiversity has thus been coined to address habitat variety. Biodiversity represents the core of the natural capital, and as such needs to be quantified and followed over time. Marine Protected Areas (MPAs) are a major tool for biodiversity conservation at sea. Monitoring of both species and habitat diversity in MPAs is therefore mandatory and must include both inventory and periodic surveillance activities. In the case of inventories, the ideal would be to census all species and all habitats, but while the latter goal can be within reach, the former seems unattainable. Species inventory should be commeasured to investigation effort, while habitat inventory should be based on mapping. Both inventories may profit from suitability spatial modelling. Periodic surveillance actions should privilege conspicuous species and priority habitats. Efficient descriptor taxa and ecological indices are recommended to evaluate environmental status. While it seems obvious that surveillance activities should be carried out with regular recurrence, diachronic inventories and mapping are rarely carried out. Time series are of prime importance to detect marine ecosystem change even in the absence of direct human impacts. [ABSTRACT FROM AUTHOR]

Posidonia oceanica is an endemic Mediterranean seagrass used as a 'biological quality element' in monitoring programmes of the EU Water Framework Directive, providing information about coastal ecosystems status. The regression of P. oceanica meadows caused a growing interest among policy makers to assess the value of seagrasses and to increase their protection. An evaluation of P. oceanica meadows located in the Ligurian-Provençal basin (NW Mediterranean) through a biophysical approach is here developed. Six meadows located in Liguria (Italy) and Corsica (France) were investigated by applying the emergy analysis to assess the natural capital (NC) stocked by leaves and rhizomes components. Results highlighted the importance of carrying out an analysis of the variations in the NC value in both components: rhizomes defined the growth stage and the capacity to store NC over time; leaves provided information on the variability due to disturbances in the water column. Emergy analysis allows defining the NC, in terms of resources needed to maintain the meadows and to provide services to coastal communities. This research is inserted into the effort of incorporating the NC evaluation into marine planning and decision making to achieve nature conservation goals, while ensuring the sustainable exploitation of marine resources. [ABSTRACT FROM AUTHOR]

Understanding which drivers cause diversity patterns is a key issue in conservation. Here we applied a spatially explicit model to predict marine benthic diversity patterns according to environmental factors in the NW Mediterranean Sea. While most conservation-oriented diversity studies consider species richness only and neglect equitability, we measured separately species richness, equitability, and 'overall' diversity (i.e., the Shannon-Wiener H′ function) on a dataset of 890 benthic species × 209 samples. Diversity values were predicted by means of Random Forest regression, on the basis of 10 factors: depth, distance from the coast, distance from the shelf break, latitude, sea-floor slope, sediment grain size, sediment sorting, distance from harbours and marinas, distance from rivers, and sampling gear. Predictions by Random Forests were accurate, the main predictors being latitude, sediment grain size, depth and distance from the coast. Based on predicted values, diversity hotspots were identified as those localities where indices were in the 15% top segment of ranked values. Only a minority of the diversity hotspots was included within the boundaries of the protection institutes established in the region. Marine protected areas are often created in sites harbouring important coastal habitats, which risks neglecting the diversity hidden in the sedimentary seafloor. We suggest that marine protected areas should accommodate portions of sedimentary habitat within their boundaries to improve diversity conservation. • A spatially explicit model was applied to predict marine benthic diversity. • Species richness, equitability, and the Shannon-Weaver function were analyzed. • Predictions by random forests were accurate. • A minority of the diversity hotspots were included in protected areas. [ABSTRACT FROM AUTHOR]

Seawater warming is impacting marine ecosystems, but proper evaluation of change requires the availability of long-term biological data series. Mesco Reef (Ligurian Sea, Italy) offers one of the longest Mediterranean data series on sessile epibenthic communities, based on underwater photographic surveys. Photographs taken in four stations between 20 m and 40 m depth allowed calculating the percent cover of conspicuous species in 1961, 1990, 1996, 2008, and 2017. Multivariate analysis evidenced an abrupt compositional change between 1990 and 1996. A parallel change was observed in Ligurian Sea temperatures. Two invasive macroalgae (Caulerpa cylindracea and Womersleyella setacea) became dominant after 1996. Community diversity was low in 1961 to 1996, rapidly increased between 1996 and 2008, and exhibited distinctly higher values in 2008–2017. A novel community emerged from the climate shift of the 1990s, with many once characteristic species lost, reduced complexity, biotic homogenization, greater diversity and domination by aliens. Only continued monitoring will help envisage the possibility for a reversal of the present phase shift or for further transformations driven by global change. [ABSTRACT FROM AUTHOR]

Biotic homogenization is an expected effect of biological invasions. Invasive alien species typically show great adaptability to a wide range of environmental conditions and may expand into different habitats, thus reducing the dissimilarity among the recipient communities. We tested this assumption by analyzing a comprehensive database (78 species × 229 samples) collected between 2012 and 2017 in the marine protected area of Portofino (NW Italy), where Caulerpa cylindracea, one of the worst invaders in the Mediterranean Sea, exhibits high substratum cover at depths between 1 m and 45 m in 14 different communities (identified according to the European Nature Information System EUNIS for habitat classification). Five samples for each of the eight depth zones (i.e., 5 m, 10 m, 15 m, 20 m, 25 m, 30 m, 35 m, and 40 m) were randomly re-sampled from the comprehensive database to produce a dataset of 67 species × 40 samples. Then, a second dataset of 66 species × 40 samples was simulated by excluding Caulerpa cylindracea. Both re-sampled datasets underwent multivariate analysis. In the presence of C. cylindracea, the overall similarity among samples was higher, thus indicating homogenization of the rocky reef communities of Portofino Marine Protected Area. Continued monitoring activity is needed to understand and assess the pattern and extent of C. cylindracea's inclusion in the recipient ecosystems. [ABSTRACT FROM AUTHOR]

Abstract Shallow hydrothermal vents emit warm water, carbon dioxide, toxic chemicals, nutrients and reduced compounds that altogether mimic climate and human impacts, and are therefore considered as 'natural laboratories' at which can be investigated the effects of these stressors on marine ecosystems. One of the effects more thoroughly investigated is the impact of reduced pH on marine biodiversity. Calcifying organisms, such as corals, are expected to be more affected, but their response to reduced pH values in seawater has been tackled mostly by laboratory studies. Here, we assessed coral recruitment and juvenile survival, two fundamental processes for coral reef maintenance and resilience, in shallow reefs of North Sulawesi (Indonesia) close to hydrothermal vents. Differences in abundance of coral recruits (<5 cm in diameter) and juveniles (5–15 cm in diameter) were evaluated at vent sites and at control sites, on both reef flats and upper slopes. Recruits of Acropora and other broadcasting corals resulted more abundant near vents, while no difference in juvenile survival was observed between vent sites and controls. On the contrary, Pocillopora , which includes many brooders, showed a low density of recruits and low survival rates at vent sites. Vents caused a typical closed water circulation that retained coral larvae on site, and this effect, rather than water acidification or the emission of chemical compounds, was likely to be responsible for increased recruitment of broadcasters. Graphical abstract Image 1 Highlights • Coral recruitment and survival are not affected by water acidification. • Recruits' abundance is enhanced in vent sites compare to control sites. • Hydrothermal vent cause a closed water circulation. • Vent activity promote coral recruitment by retaining coral larvae. • Broadcast-spawning corals, Acropora and most of the Others, seem to be favoured. [ABSTRACT FROM AUTHOR]

Seawater warming is affecting corals worldwide. Mass mortality events are increasingly frequent, and the bioconstruction potential of coral reefs is jeopardized. Revisiting sites surveyed in the past may represent a valuable tool to better understand the health state and ongoing trend of coral reefs. In the Mediterranean Sea the only reef-building coral is the endemic species Cladocora caespitosa. Several mortality events of this coral, due to thermal anomalies, have been reported in the last decades. An impressive change occurred in a population of C. caespitosa revisited 25 years after: smaller colonies became the prevalent size class and larger colonies disappeared, highlighting a loss in the bioconstruction potential. Data collected on C. caespitosa colonies in the Eastern Ligurian Sea (NW Mediterranean) revealed that mortality rate was correlated with colony size, while reproductive potential apparently increased, suggesting hormesis (i.e., enhanced reproductive output under pre-lethal conditions). • Cladocora caespitosa is the only reef-building coral in the Mediterranean Sea. • C. caespitosa has been affected by mass mortality events due to the water warming. • Evaluation of the present coral health status requires long-term data series. • A loss in the bioconstruction potential of C. caespitosa was observed. • Mortality of C. caespitosa concerns predominantly largest colonies. [ABSTRACT FROM AUTHOR]

The Serpulidae are a large family of sedentary polychaetes, characterized by a calcareous habitation tube, which they cannot leave. The calcium carbonate tube is in the form of both aragonite and calcite, in fairly constant ratio for each taxon. Tubes are cemented firmly to any hard substrate (in only few species tubes are free). Although in the majority of the species the tubes encrust the substrate for all their length, the distal part may eventually detach and grow erectly. Certain species in dense populations build tubes vertical to the substrate in clumps and cement the tubes to each other. This gives serpulids the capability of forming reef-life structures when densely settling. Despite the relative smallness of the individual tubes (rarely longer than 15 cm and wider than 1 cm), such reef-like structures may cover tens of m2, with a layer more than 1 m thick. Serpulid reefs can be divided roughly into seven groups, according to the building modality and the type of habitat they occupy: (i) pseudocolonies; (ii) littoral belts; (iii) subtidal to deep-water reefs; (iv) reefs in coastal lakes and harbours; (v) brackish water reefs; (vi) tapestries in freshwater caves; (vii) biostalactites inside marine caves. The role of serpulid reefs in the ecosystems they inhabit is multifarious and may be distinguished in functions (biomass and production, benthic pelagic coupling, resistance and resilience, reproductive and survivorship strategies, trophodynamics, bioconstruction, living space and refuge, nursery, sediment formation and retention, food for other species, carbonate deposition and storage) and services (water clearance, reef associated fishery, cultural benefits). On the other hand, many serpulids are important constituents of biological fouling, and their calcareous masses damage submerged artefacts, causing huge economic costs. Positive and negative roles of serpulid reefs need to be compared with common metrics; the overall balance, however, is still to be assessed. [ABSTRACT FROM AUTHOR]

Abstract Marine coastal ecosystems are facing structural and functional changes due to the increasing human footprint worldwide, and the assessment of their long-term changes becomes particularly challenging. Measures of change can be done by comparing the observed ecosystem status to a purposely defined reference condition. In this paper, a geospatial modelling approach based on 2D mapping and morphodynamic data was used to predict the natural position of the upper limit (i.e., the landward continuous front) of Posidonia oceanica seagrass meadows settled on soft bottom. This predictive model, formerly developed at the regional spatial scale, was here applied for the first time at the Mediterranean spatial scale in eight coastal areas of Spain, France, Italy, and Greece showing different coastal morphologies and hydrodynamic characteristics, and affected by a number of natural and/or human local disturbances. The model was effective in measuring the regression (i.e., seaward withdrawal) of the meadow upper limit. In all the meadows investigated the upper limit was regressed, laying deeper than the reference condition, with the proportion of regression ranging from 17.7% to 98.9%. The highest values of regression were found in Spain and in France, and were consistent with the highest levels of fragmentation detected with map analysis and of coastal pressures. This geospatial modelling approach represents an effective tool to define the reference conditions when proper pristine areas or historical data are not available, thus allowing the assessment of long-time changes experienced by seagrass ecosystems due to human impacts. Highlights • Reference conditions are needed to measure long-term change in marine ecosystems. • We modelled the upper (landward) limit of seagrass meadows at Mediterranean scale. • All meadow upper limits appeared regressed and fragmented due to local disturbances. • Modelling represents an effective tool for evaluating seagrass meadow conditions. [ABSTRACT FROM AUTHOR]

Coral reefs are threatened by multiple global and local disturbances. The Maldives, already heavily hit by the 1998 mass bleaching event, are currently affected also by growing tourism and coastal development that may add to global impacts. Most of the studies investigating effects of local disturbances on coral reefs assessed the response of communities along a horizontal distance from the impact source. This study investigated the status of a Maldivian coral reef around an island where an international touristic airport has been recently (2009–2011) built, at different depths along the reef profile (5–20 m depth) and considering the change in the percentage of cover of five different non-taxonomic descriptors assessed through underwater visual surveys: hard corals, soft corals, other invertebrates, macroalgae and abiotic attributes. Eight reefs in areas not affected by any coastal development were used as controls and showed a reduction of hard coral cover and an increase of abiotic attributes (i.e. sand, rock, coral rubble) at the impacted reef. However, hard coral cover, the most widely used descriptor of coral reef health, was not sufficient on its own to detect subtle indirect effects that occurred down the reef profile. Selecting an array of descriptors and considering different depths, where corals may find a refuge from climate impacts, could guide the efforts of minimising local human pressures on coral reefs. [ABSTRACT FROM AUTHOR]

A new index of ecological status, named Mesophotic Assemblages Ecological Status (MAES) index, was elaborated on the basis of ROV (Remotely Operated Vehicle) photography and video footage in order to assess the status of mesophotic megabenthic assemblages from hard bottom. The index was tested on seven sites located between 50 and 150 m depth in the Ligurian and Tyrrhenian seas (western Mediterranean Sea). The MAES index considers three main parameters: (i) the community structure (number of megabenthic taxa, percent biotic cover in the basal layer, density of erect species); (ii) the condition of the dominant erect species (average height, percent of colonies with epibiosis/necrosis); (iii) the visible human impact (density of marine litter, including lost fishing gears). Two versions of the index have been elaborated, the complete version (MAES) and the quick version ( q -MAES), which showed comparable results, therefore suggesting the possibility of fastening assessment times. The sensitivity of the MAES index was correlated with the putative human pressure acting upon the site (semi-quantitatively assessed considering fishing effort and coastal urbanization). A standard working protocol related to the evaluation of the MAES index is here proposed with the intent to create an effective monitoring tool for the assessment of the ecological status of mesophotic assemblages on a large scale, as required by the EU Marine Strategy Framework Directive. MAES index will enhance the comprehension of the dynamics of mesophotic Mediterranean megabenthic assemblages with respect to human pressures and will also provide marine scientists and managers with a valuable tool specifically designed for the conservation of such vulnerable marine ecosystems. [ABSTRACT FROM AUTHOR]

A theoretical model of structure and functioning was constructed for the Mediterranean undersea cave ecosystem. This model integrates almost all representative components of the cave ecosystem and gives an idea of their faunal compositions, characteristics and related interactions. This model constitutes the basis of the Ecosystem-Based Quality Index (EBQI) of the European Union's Marine Strategy Framework Directive, which aims at evaluating the ecological quality of an ecosystem. It is based on four crucial complementary elements: (i) each component was weighted in accordance with its importance in determining the structure and functioning of the cave ecosystem; (ii) a suite of relevant parameters were defined to assess the ecological state of each component of the cave ecosystem; (iii) these parameters were aggregated into one relevant index, the Cave EBQI (CavEBQI), to summarize the quality evaluation for each cave site; (iv) each value of ecological state is accompanied by a Confidence Index as a measure of its reliability. The CavEBQI was used on 22 Mediterranean undersea caves of France and Italy. Disparities of ecological quality were found among caves but most of them ranged from moderate to high ecological quality. For some caves, no conclusion can be drawn when our method predicts a poor reliability of the evaluation of their ecological quality. This ecosystem-based evaluation of the quality of undersea caves seems to be a powerful tool, with the advantage of being based on almost all its components, rather than just on a few species. It is accompanied by a measure of its reliability, hence it provides a reliable idea of the ecological state of the entire ecosystem at each cave site. Monitoring the ecological state of caves and the effects of disturbances over large geographic and temporal scales is made possible with CavEBQI. Applying the same method to other ecosystems, can provide an integrated view of a marine region, which is essential when addressing questions about protection, conservation and restoration. [ABSTRACT FROM AUTHOR]