28 results on '"Bourke D"'
Search Results
2. Maternal social support, depression and emotional availability in early mother-infant interaction: Findings from a pregnancy cohort
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MacMillan, K.K., Lewis, A.J., Watson, S.J., Bourke, D., Galbally, M., MacMillan, K.K., Lewis, A.J., Watson, S.J., Bourke, D., and Galbally, M.
- Abstract
Background Social support theory suggests that parental social support may influence the nature of early parenting behaviours and specifically the mother-infant relationship. This study examines whether support from a partner, friends or family is associated with differences in quality of mother-infant interactions in the context of maternal depression. Methods 210 women were followed from early pregnancy to six months postpartum within Australian pregnancy cohort, the Mercy Pregnancy and Emotional Wellbeing Study (MPEWS). Mother-infant interactions within a standardised observation at six months postpartum were measured by the Emotional Availability (EA) Scales using total scores of the parental scales. In early and late pregnancy and at six months postpartum, mothers rated perceived maternal social support from a partner, family and friends using subscales of the Multidimensional Scale of Perceived Social Support. Depression was measured in early pregnancy and at six months postpartum using the Structured Clinical Interview for the DSM-IV-TR, with repeated measurement of depressive symptoms by the Edinburgh Postnatal Depression Scale (EPDS). Data was analysed using structural equation models. Results There were significant interactions between depressive symptoms in early pregnancy and perceived maternal support from a partner (B = .18, 95% CI = 03, .31) and separately from family (B = .12, 95% CI = .03, .32) in predicting maternal emotional availability. No such interaction was found for support from friends. While partner and family support moderated the association between early depressive symptoms and emotional availability, there were no direct associations between maternal depressive disorder in early pregnancy and perceived support, and further, maternal depression was not a significant predictor of emotional availability. Limitations Future studies should consider extending measurement of the mother-infant relationship beyond the EA Scales, inclusion of a
- Published
- 2021
3. Early impact of the Australian national shingles vaccination program with the herpes zoster live attenuated vaccine
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Litt, J, Booy, R, Bourke, D, Dwyer, DE, Leeb, A, McCloud, P, Stein, AN, Woodward, M, Cunningham, AL, Litt, J, Booy, R, Bourke, D, Dwyer, DE, Leeb, A, McCloud, P, Stein, AN, Woodward, M, and Cunningham, AL
- Abstract
Herpes zoster (shingles) is a painful condition resulting from reactivation of latent varicella zoster virus (VZV). The Australian National Shingles Vaccination Program (commenced November 2016) provides free herpes zoster vaccination for eligible adults aged 70 years, with a 5-year catch-up program (until October 2021) for adults aged 71-79 years. Patterns and impact of the program were evaluated by analysis of vaccine distribution and delivery data and specific antiviral prescription data from the Pharmaceutical Benefits Scheme. During the first 2 years, uptake of funded live attenuated shingles vaccine ZOSTAVAX® (Zoster Virus Vaccine Live; ZVL) was high across the ongoing and catch-up programs. Before program implementation (2006-2016), herpes zoster coded antiviral prescription rates increased by 2.2% per year (95% CI: 1.5, 2.9) in the 70-79 years age group. In the two years since program launch, herpes zoster antiviral prescription rates declined substantially in this age group, by an average of 13.6% per year (95% CI: 1.5, 24.2). These results indicate that the National Shingles Vaccination Program has been highly successful in vaccinating a considerable proportion of Australian adults aged 70-79 years against herpes zoster and suggest that vaccine uptake was associated with decreased incidence of herpes zoster.
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- 2020
4. Trip Niger
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Bourke, D O'D
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The Nigerian Field, 36 (2), 75-90
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- 2019
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5. Toad Trap
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Bourke, D O'D
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The Nigerian Field, 33 (3), 143-143
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- 2019
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6. The Kazabo
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Bourke, D O'D
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The Nigerian Field, 32 (1), 17-21
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- 2019
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7. Some Observations
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Bourke, D O'D
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The Nigerian Field, 30 (3), 99-112
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- 2019
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8. Owls in Captivity
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Bourke, D O'D
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The Nigerian Field, 21 (1), 28-35
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- 2019
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9. Quele Quele
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Bourke, D O'D
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The Nigerian Field, 25 (1), 3-12
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- 2019
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10. Projected climate change impacts on upland heaths in Ireland
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Coll, J, primary, Bourke, D, additional, Hodd, RL, additional, Sheehy Skeffington, M, additional, Gormally, M, additional, and Sweeney, J, additional
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- 2016
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11. The evolution, ecology and conservation of Conophytum N.E.Br. (Aizoaceae) ��� a diverse genus of dwarf succulent plants in an arid biodiversity hotspot in southern Africa
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Bentley, L, Bourke, D, Young, A, and Kapralov, M
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QK - Abstract
Conophytum N.E.Br. (Aizoaceae) is a genus of dwarf succulent plants endemic to western South Africa and southern Namibia. It is highly diverse, with 106 constituent species and is considered a model genus for the Succulent Karoo Biome, an arid region with uniquely high desiccation-tolerant (succulent) plant diversity, based on its variety of distribution types and growth forms. The aim of this project was twofold: to provide a clearer understanding of the patterns and drivers of speciation in the genus, and to identify conservation strategies that maximise the likely survival of these species, based on spatial ecological analyses of their current distributions. The biodiversity of the Succulent Karoo biome is increasingly vulnerable to a multitude of threats, mostly as a consequence of growing levels of human activity. The current and future conservation of Conophytum is dependent on evidence-based interventions that, in particular, help mitigate the effects of a changing climate and illegal collecting. First, an updated phylogeny was produced providing the foundation to many of the analyses undertaken in this thesis, beginning with an assessment of the drivers of diversification. For the first time, nuclear gene regions and sequences from almost all species in the genus (102 of 106) were included in the development of phylogenetic hypotheses. From there, a selection of 12 pertinent characters was mapped over the phylogeny and phylogenetic signal was calculated in a univariate and multivariate manner. This, along with correlations in character evolution, was used to infer potential drivers of diversification. Nocturnal flowering was found to characterise certain clades and was correlated with pollen type D and flower structure A2, suggesting an influence of pollinator specialisation on evolution, while windowed leaves characterised one particularly large, strongly supported clade in the phylogeny, and, through correlated evolution with other traits such as the presence of bladder cells, suggested a key influence of the abiotic environment in this clade���s formation. This abiotic influence on speciation was further investigated using spatial environmental data to determine differences in the abiotic preferences of individual Conophytum species and five large, strongly supported clades in the phylogeny. Geological, topographical and climatic variables were mapped onto the phylogeny, while differences in clade and species��� environmental preferences were assessed. Associations between environmental variables and the evolution of certain traits were also analysed. Variation in precipitation/moisture, elevation and slope were identified as key drivers of diversification in the genus, with niche divergence prevalent in driving speciation. Additionally, some clades were characterised by both nocturnal flowering and certain leaf traits (e.g. very long trichomes, sunken stomata), suggesting a possible interaction between biotic and abiotic diversification drivers. These interactions were analysed mainly by calculating correlations between nocturnal flowering and abiotic variables. Nocturnal flowering was strongly correlated with a lower mean annual temperature, suggesting a possible climatic influence on pollinator assemblages potentially driving a greater likelihood of species in cooler locations to be nocturnally moth pollinated. After gaining a greater understanding of what drove diversity in Conophytum, attention switched to the vulnerability of this diversity to future changes in climate by projecting range change responses using species distribution models (SDMs). These analyses focused on the more broadly distributed species (a minimum of 20 occurrence points) to facilitate the building of statistically robust models, comparing climate change vulnerability at both the species- and clade-levels. For four of the five clades, and for the genus as a whole, range size reduction was prevalent, with a range contraction from the north occurring as conditions in the north of the genus��� range become unsuitable through lower winter rainfall and increased temperatures, while the more mesic southern reaches of South Africa remain unsuitable for Conophytum inhabitation. One clade, however, characterised by bladder cells and windowed leaves which give constituent species better adaptation to hotter conditions, may include some species that benefit from predicted future climate conditions. Two new regions were prioritised based on these projections for future protection, as these successfully cover the areas of high current and future diversity in the genus, along with protecting separate clades and thereby maintaining phylogenetic diversity. As SDMs excluded narrow endemics in the genus because of the low numbers of occurrence points available, a final assessment on the abiotic environmental preferences and trait associations of narrow endemic Conophytum species was performed to better understand their ecology and to aid their conservation. These taxa make up a sizable proportion of species in the genus (~33%) and are some of the most vulnerable Conophytum species through their small range and population sizes. This assessment demonstrated a preference of these species for more high-stress environments (steeper slopes, higher elevation and low moisture) compared to broadly distributed species, and identified that these taxa are predominantly diurnal flowering, although this was likely to be because narrow endemic distribution overlaps strongly with diurnal wasp pollinators. This study also identified an important region for the conservation of narrow endemics and these ecological findings will assist prioritising regions for protection or translocation. The findings of this project shed light on the evolution of Conophytum and its vulnerability to anthropogenic impacts and provide an improved basis for understanding of the genus��� ecology and biogeography. Based on these findings, Conophytum can now act as an ideal model genus for the Succulent Karoo, a uniquely biodiverse arid hotspot. An improved understanding of the evolution and vulnerability of Conophytum provides important evidence for drivers of rapid speciation in a region known for its diversifications and, perhaps even more importantly, highlights threats and important conservation strategies for the Succulent Karoo in an uncertain future.
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- 2022
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12. Conserving temperate montane birds under climate change: an assessment of potential management options
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Bellis, J, Bourke, D, Dalrymple, S, and Bowe, C
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QL ,GE ,QH ,QH Natural history ,QL Zoology ,GE Environmental Sciences - Abstract
Montane species are particularly vulnerable to the threats posed by climate change. As temperatures increase, their climatic niche will shift upwards – and species must either adapt to warmer conditions, or migrate to avoid extinction. In the first section of this thesis, I assessed the feasibility of management strategies available to conservation practitioners for conserving montane bird species under climate change. I integrated the dimensions of vulnerability outlined in previous research with management strategies relevant to the conservation of montane birds in order to specify the most appropriate strategy for species that display certain elements of vulnerability. I also outline the specific data and research needs that would allow conservation practitioners to more rigorously assess the management strategy for their focal montane species. It is evident that for some highly specialised species – such as alpine birds that are restricted to habitats above the treeline – conservation practitioners will be more limited in their choice of management approach. Assisted colonisation (AC) has been proposed as a strategy for mountaintop species with nowhere left to go. However, this strategy is reliant on the identification of suitable sites elsewhere. In the second section of this thesis, I focused on the identification and assessment of potential AC sites for European alpine birds. My results highlight the severe threat posed by climate change, with European alpine birds projected to lose 57-80% of their climatically suitable area by 2080. I identified promising AC sites that will sustain suitable conditions under climate change for the majority of species considered. My findings are useful for guiding conservation practitioners to the most suitable AC sites for alpine birds under climate change, as well as for identifying the most suitable source populations for translocating individuals to those sites, the latter of which represents a novel approach.
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- 2018
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13. The epidemiology of psoriatic arthritis in the UK: a health intelligence analysis of UK Primary Care Electronic Health Records 1991-2020.
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Druce KL, Yimer BB, Humphreys J, Njuki LN, Bourke D, Li M, Ellis B, Zhang Y, Bravo R, Hyrich KL, Verstappen SMM, Dixon WG, and McBeth J
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- Humans, Male, United Kingdom epidemiology, Female, Middle Aged, Incidence, Adult, Prevalence, Aged, Young Adult, Adolescent, Bayes Theorem, Arthritis, Psoriatic epidemiology, Electronic Health Records statistics & numerical data, Primary Health Care statistics & numerical data
- Abstract
Objectives: Epidemiological estimates of psoriatic arthritis (PsA) underpin the provision of healthcare, research, and the work of government, charities and patient organizations. Methodological problems impacting prior estimates include small sample sizes, incomplete case ascertainment, and representativeness. We developed a statistical modelling strategy to provide contemporary prevalence and incidence estimates of PsA from 1991 to 2020 in the UK., Methods: Data from Clinical Practice Research Datalink (CPRD) were used to identify cases of PsA between 1st January 1991 and 31st December 2020. To optimize ascertainment, we identified cases of Definite PsA (≥1 Read code for PsA) and Probable PsA (satisfied a bespoke algorithm). Standardized annual rates were calculated using Bayesian multilevel regression with post-stratification to account for systematic differences between CPRD data and the UK population, based on age, sex, socioeconomic status and region of residence., Results: A total of 26 293 recorded PsA cases (all definitions) were identified within the study window (77.9% Definite PsA). Between 1991 and 2020 the standardized prevalence of PsA increased twelve-fold from 0.03-0.37. The standardized incidence of PsA per 100 000 person years increased from 8.97 in 1991-15.08 in 2020, an almost 2-fold increase. Over time, rates were similar between the sexes, and across socioeconomic status. Rates were strongly associated with age, and consistently highest in Northern Ireland., Conclusion: The prevalence and incidence of PsA recorded in primary care has increased over the last three decades. The modelling strategy presented can be used to provide contemporary prevalence estimates for musculoskeletal disease using routinely collected primary care data., (© The Author(s) 2023. Published by Oxford University Press on behalf of the British Society for Rheumatology.)
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- 2024
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14. A multi-exon RFC1 deletion in a case of CANVAS: expanding the genetic mechanism of disease.
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Davies KC, Fearnley LG, Snell P, Bourke D, Mossman S, Kyne K, McKeown C, Delatycki MB, Bahlo M, and Lockhart PJ
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Competing Interests: Declarations. Conflicts of interest: On behalf of all authors, the corresponding author states that there is no conflict of interest. Ethical approval: The Royal Children’s Hospital Human Research Ethics Committee (HREC #28097) and the Walter and Eliza Hall Institute of Medical Research Human Research Ethics Committee (HREC #18/06) approved the study, and all procedures were conducted according to the guidelines of the Declaration of Helsinki. Informed consent was obtained from the participant and clinical details were collected from review of medical records.
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- 2024
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15. Feasibility and acceptability to use a smartphone-based manikin for daily longitudinal self-reporting of chronic pain.
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Ali SM, Selby DA, Bourke D, Bravo Santisteban RD, Chiarotto A, Firth J, James B, Parker B, Dixon WG, and van der Veer SN
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Background: As management of chronic pain continues to be suboptimal, there is a need for tools that support frequent, longitudinal pain self-reporting to improve our understanding of pain. This study aimed to assess the feasibility and acceptability of daily pain self-reporting using a smartphone-based pain manikin., Methods: For this prospective feasibility study, we recruited adults with lived experience of painful musculoskeletal condition. They were asked to complete daily pain self-reports via an app for 30 days. We assessed feasibility by calculating pain report completion levels, and investigated differences in completion levels between subgroups. We assessed acceptability via an end-of-study questionnaire, which we analysed descriptively., Results: Of the 104 participants, the majority were female ( n = 87; 84%), aged 45-64 ( n = 59; 57%), and of white ethnic background ( n = 89; 86%). The mean completion levels was 21 (± 7.7) pain self-reports. People who were not working (odds ratio (OR) = 1.84; 95% confidence interval (CI), 1.52-2.23) were more likely, and people living in less deprived areas (OR = 0.77; 95% CI, 0.62-0.97) and of non-white ethnicity (OR = 0.45; 95% CI, 0.36-0.57) were less likely to complete pain self-reports than their employed, more deprived and white counterparts, respectively. Of the 96 participants completing the end-of-study questionnaire, almost all participants agreed that it was easy to complete a pain drawing ( n = 89; 93%)., Conclusion: It is feasible and acceptable to self-report pain using a smartphone-based manikin over a month. For its wider adoption for pain self-reporting, the feasibility and acceptability should be further explored among people with diverse socio-economic and ethnic backgrounds., Competing Interests: The authors declared no potential conflicts of interest with respect to the research, authorship and/or publication of this article., (© The Author(s) 2023.)
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- 2023
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16. Maternal social support, depression and emotional availability in early mother-infant interaction: Findings from a pregnancy cohort.
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MacMillan KK, Lewis AJ, Watson SJ, Bourke D, and Galbally M
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- Australia, Depression, Female, Humans, Infant, Mother-Child Relations, Postpartum Period, Pregnancy, Social Support, Depression, Postpartum, Mothers
- Abstract
Background: Social support theory suggests that parental social support may influence the nature of early parenting behaviours and specifically the mother-infant relationship. This study examines whether support from a partner, friends or family is associated with differences in quality of mother-infant interactions in the context of maternal depression., Methods: 210 women were followed from early pregnancy to six months postpartum within Australian pregnancy cohort, the Mercy Pregnancy and Emotional Wellbeing Study (MPEWS). Mother-infant interactions within a standardised observation at six months postpartum were measured by the Emotional Availability (EA) Scales using total scores of the parental scales. In early and late pregnancy and at six months postpartum, mothers rated perceived maternal social support from a partner, family and friends using subscales of the Multidimensional Scale of Perceived Social Support. Depression was measured in early pregnancy and at six months postpartum using the Structured Clinical Interview for the DSM-IV-TR, with repeated measurement of depressive symptoms by the Edinburgh Postnatal Depression Scale (EPDS). Data was analysed using structural equation models., Results: There were significant interactions between depressive symptoms in early pregnancy and perceived maternal support from a partner (B = .18, 95% CI = 03, .31) and separately from family (B = .12, 95% CI = .03, .32) in predicting maternal emotional availability. No such interaction was found for support from friends. While partner and family support moderated the association between early depressive symptoms and emotional availability, there were no direct associations between maternal depressive disorder in early pregnancy and perceived support, and further, maternal depression was not a significant predictor of emotional availability., Limitations: Future studies should consider extending measurement of the mother-infant relationship beyond the EA Scales, inclusion of a measure of maternal childhood trauma, and replicating our findings., Conclusion: Maternal perception of partner and family support in the postpartum is a predictor of the association between early pregnancy depressive symptoms and maternal emotional availability., (Crown Copyright © 2021. Published by Elsevier B.V. All rights reserved.)
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- 2021
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17. The impact of an online adult headache guideline on headache referrals to the neurology clinic.
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Huang L, Bourke D, and Ranta A
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- Adult, Ambulatory Care Facilities, Headache diagnosis, Headache epidemiology, Headache therapy, Humans, Referral and Consultation, Headache Disorders, Secondary diagnosis, Headache Disorders, Secondary epidemiology, Headache Disorders, Secondary therapy, Neurology
- Abstract
Background: Headache is a common problem in primary care and one of the main reasons general practitioners (GP) consult the neurology service. We developed an online adult headache guideline (Supporting Information Appendix S1) for the greater Wellington Region as a resource for GP to guide identification of concerning headaches, initiation of prophylactic medications for migraine and management of analgesic overuse headache., Aims: To examine the effectiveness of this adult headache guideline in reducing demand on the neurology outpatient service for headache patients that could readily be managed in primary care., Methods: We reviewed electronic referrals to Wellington Hospital's neurology department before and after the implementation of the online headache guideline. The primary outcome was the proportion of referrals for headache. Secondary outcomes included proportion of referrals requiring clinic review, rate of pre-referral trial of headache prophylactic medication and medication overuse headache diagnosed at neurological consultation., Results: Nine hundred neurology referrals before and 801 referrals after the publication of the online headache guideline were included. There was a statistically significant reduction in proportion of referrals for headache (15.4% vs 11.7%; P = 0.026). There was neither an increased rate of pre-referral adequate prophylactic medication trial (33.8% vs 27.7%; P = 0.320) nor fewer medication overuse headaches diagnosed during the neurology assessment (21.9% vs 25.0%; P = 0.674)., Conclusion: The launch of an online headache guideline was associated with a reduction in demand on neurology service. Further education could improve the utilisation of this guideline, to avoid delays in prophylactic treatment and reduce the harm of medication overuse., (© 2020 Royal Australasian College of Physicians.)
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- 2021
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18. Reducing medication errors for hospital inpatients with Parkinsonism.
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Lance S, Travers J, and Bourke D
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- Hospitals, Humans, Medication Errors prevention & control, Pharmacists, Inpatients, Parkinsonian Disorders
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Background: Patients with Parkinsonism are 1.5 times more likely than comparators to be hospitalised and have a significantly longer length of stay in hospital. Medication delays, inappropriate medication omission, and administration of contraindicated medications likely contribute to these poor outcomes. Education and hospital system interventions may reduce these errors., Aim: To determine the effectiveness of a multimodal education and awareness campaign in reducing medication errors in patients with Parkinsonism at Hutt Hospital., Methods: We performed an audit of hospital medication charts to establish the baseline medication error rate and patient outcomes over a 3-month period. We then delivered an intervention consisting of staff education sessions, a sticker alert system and increased priority for pharmacist review of patient drug charts. We repeated the audit after the intervention., Results: In the initial audit, the medication error rate was 22.5%, the clinical complication rate was 45% and one death was directly attributable to medication error. At follow up, the medication error and complication rates were 9.3% (absolute difference 13% (95% conflict of interest (CI) 10-16.4), P < 0.001) and 38% (absolute difference 7% (95% CI -19 to 34), P = 0.59), respectively, and there were no attributable deaths. The average length of stay before and after the intervention was 13 and 8 days respectively (absolute difference 5.7 days (95% CI -1.8 to 13.3), P = 0.135)., Conclusions: There was a high in-hospital medication error rate for Parkinsonian patients. The intervention resulted in a statistically significantly improvement in the medication error rate. The estimated reductions in complication rate and length of stay may be clinically important. Similar interventions may be beneficial in other institutions., (© 2020 Royal Australasian College of Physicians.)
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- 2021
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19. Early impact of the Australian national shingles vaccination program with the herpes zoster live attenuated vaccine.
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Litt J, Booy R, Bourke D, Dwyer DE, Leeb A, McCloud P, Stein AN, Woodward M, and Cunningham AL
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- Adult, Aged, Australia epidemiology, Herpesvirus 3, Human immunology, Humans, Vaccination, Herpes Zoster epidemiology, Herpes Zoster prevention & control, Herpes Zoster Vaccine therapeutic use, Neuralgia, Postherpetic epidemiology, Neuralgia, Postherpetic prevention & control, Vaccines, Attenuated
- Abstract
Herpes zoster (shingles) is a painful condition resulting from reactivation of latent varicella zoster virus (VZV). The Australian National Shingles Vaccination Program (commenced November 2016) provides free herpes zoster vaccination for eligible adults aged 70 years, with a 5-year catch-up program (until October 2021) for adults aged 71-79 years. Patterns and impact of the program were evaluated by analysis of vaccine distribution and delivery data and specific antiviral prescription data from the Pharmaceutical Benefits Scheme. During the first 2 years, uptake of funded live attenuated shingles vaccine ZOSTAVAX® (Zoster Virus Vaccine Live; ZVL) was high across the ongoing and catch-up programs. Before program implementation (2006-2016), herpes zoster coded antiviral prescription rates increased by 2.2% per year (95% CI: 1.5, 2.9) in the 70-79 years age group. In the two years since program launch, herpes zoster antiviral prescription rates declined substantially in this age group, by an average of 13.6% per year (95% CI: 1.5, 24.2). These results indicate that the National Shingles Vaccination Program has been highly successful in vaccinating a considerable proportion of Australian adults aged 70-79 years against herpes zoster and suggest that vaccine uptake was associated with decreased incidence of herpes zoster.
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- 2020
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20. Climate suitability as a predictor of conservation translocation failure.
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Bellis J, Bourke D, Maschinski J, Heineman K, and Dalrymple S
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- Amphibians, Animals, Biodiversity, Reptiles, Conservation of Natural Resources, Ecosystem
- Abstract
The continuing decline and loss of biodiversity has caused an increase in the use of interventionist conservation tools, such as translocation. However, many translocation attempts fail to establish viable populations, with poor release site selection often flagged as an inhibitor of success. We used species distribution models (SDMs) to predict the climate suitability of 102 release sites for amphibians, reptiles, and terrestrial insects and compared suitability predictions between successful and failed attempts. We then quantified the importance of climate suitability relative to 5 other variables frequently considered in the literature as important determinants of translocation success: number of release years, number of individuals released, life stage released, origin of the source population, and position of the release site relative to the species' range. Probability of translocation success increased as predicted climate suitability increased and this effect was the strongest among the variables we considered, accounting for 48.3% of the variation in translocation outcome. These findings should encourage greater consideration of climate suitability when selecting release sites for conservation translocations and we advocate the use of SDMs as an effective way to do this., (© 2020 The Authors. Conservation Biology published by Wiley Periodicals LLC on behalf of Society for Conservation Biology.)
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- 2020
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21. Craniectomy for acute disseminated encephalomyelitis.
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Bourke D and Woon K
- Abstract
A 17-year-old girl underwent emergency bifrontal craniectomy for severely raised intracranial pressure with brainstem compression, having developed acute disseminated encephalomyelitis (ADEM) following Epstein-Barr virus infection. We discuss the current evidence for craniectomy in both ADEM and infective encephalitis and propose an approach to management., Competing Interests: Competing interests: None declared., (© Author(s) (or their employer(s)) 2020. No commercial re-use. See rights and permissions. Published by BMJ.)
- Published
- 2020
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22. Web Application for the Automated Extraction of Diagnosis and Site From Pathology Reports for Keratinocyte Cancers.
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Thompson BS, Hardy S, Pandeya N, Dusingize JC, Green AC, Millane A, Bourke D, Grande R, Bean CD, Olsen CM, and Whiteman DC
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- Adult, Aged, Female, Humans, Incidence, Keratinocytes, Male, Middle Aged, Carcinoma, Basal Cell diagnosis, Carcinoma, Basal Cell epidemiology, Carcinoma, Squamous Cell diagnosis, Skin Neoplasms diagnosis
- Abstract
Purpose: Keratinocyte cancers are exceedingly common in high-risk populations, but accurate measures of incidence are seldom derived because the burden of manually reviewing pathology reports to extract relevant diagnostic information is excessive. Thus, we sought to develop supervised learning algorithms for classifying basal and squamous cell carcinomas and other diagnoses, as well as disease site, and incorporate these into a Web application capable of processing large numbers of pathology reports., Methods: Participants in the QSkin study were recruited in 2011 and comprised men and women age 40-69 years at baseline (N = 43,794) who were randomly selected from a population register in Queensland, Australia. Histologic data were manually extracted from free-text pathology reports for participants with histologically confirmed keratinocyte cancers for whom a pathology report was available (n = 25,786 reports). This provided a training data set for the development of algorithms capable of deriving diagnosis and site from free-text pathology reports. We calculated agreement statistics between algorithm-derived classifications and 3 independent validation data sets of manually abstracted pathology reports., Results: The agreement for classifications of basal cell carcinoma (κ = 0.97 and κ = 0.96) and squamous cell carcinoma (κ = 0.93 for both) was almost perfect in 2 validation data sets but was slightly lower for a third (κ = 0.82 and κ = 0.90, respectively). Agreement for total counts of specific diagnoses was also high (κ > 0.8). Similar levels of agreement between algorithm-derived and manually extracted data were observed for classifications of keratoacanthoma and intraepidermal carcinoma., Conclusion: Supervised learning methods were used to develop a Web application capable of accurately and rapidly classifying large numbers of pathology reports for keratinocyte cancers and related diagnoses. Such tools may provide the means to accurately measure subtype-specific skin cancer incidence.
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- 2020
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23. Safety and acceptability of clozapine and risperidone in progressive multiple sclerosis: a phase I, randomised, blinded, placebo-controlled trial.
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La Flamme AC, Abernethy D, Sim D, Goode L, Lockhart M, Bourke D, Milner I, Garrill TM, Joshi P, Watson E, Smyth D, Lance S, and Connor B
- Abstract
Objective: Because clozapine and risperidone have been shown to reduce neuroinflammation in humans and mice, the Clozapine and Risperidone in Progressive Multiple Sclerosis (CRISP) trial was conducted to determine whether clozapine and risperidone are suitable for progressive multiple sclerosis (pMS)., Methods: The CRISP trial (ACTRN12616000178448) was a blinded, randomised, placebo-controlled trial with three parallel arms (n=12/arm). Participants with pMS were randomised to clozapine (100-150 mg/day), risperidone (2.0-3.5 mg/day) or placebo for 6 months. The primary outcome measures were safety (adverse events (AEs)/serious adverse events (SAE)) and acceptability (Treatment Satisfaction Questionnaire for Medication-9)., Results: An interim analysis (n=9) revealed significant differences in the time-on-trial between treatment groups and placebo (p=0.030 and 0.025, clozapine and risperidone, respectively) with all participants receiving clozapine being withdrawn during the titration period (mean dose=35±15 mg/day). Participants receiving clozapine or risperidone reported a significantly higher rate of AEs than placebo (p=0.00001) but not SAEs. Specifically, low doses of clozapine appeared to cause an acute and dose-related intoxicant effect in patients with pMS who had fairly severe chronic spastic ataxic gait and worsening over all mobility, which resolved on drug cessation., Interpretation: The CRISP trial results suggest that patients with pMS may experience increased sensitivity to clozapine and risperidone and indicate that the dose and/or titration schedule developed for schizophrenia may not be suitable for pMS. While these findings do not negate the potential of these drugs to reduce multiple sclerosis-associated neuroinflammation, they highlight the need for further research to understand the pharmacodynamic profile and effect of clozapine and risperidone in patients with pMS., Trial Registration Number: ACTRN12616000178448., Competing Interests: Competing interests: ACL and BC have a patent for the use of clozapine and risperidone during MS. ACL is a founding scientist and shareholder in ReKover Therapeutics, which has no relationship to the Clozapine and Risperidone in Progressive Multiple Sclerosis study. In addition, BC has a patent PCT/US2011/042244 issued., (© Author(s) (or their employer(s)) 2020. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ.)
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- 2020
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24. Isolated hypoglossal nerve palsy due to internal carotid artery dissection.
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Joshi P and Bourke D
- Abstract
Competing Interests: Competing interests: None declared.
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- 2017
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- View/download PDF
25. Clozapine-Related Tachycardia in an Adolescent with Treatment-Resistant Early Onset Schizophrenia.
- Author
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Kolli V, Bourke D, Ngo J, Luber MJ, and Coffey BJ
- Subjects
- Adolescent, Age of Onset, Female, Humans, Antipsychotic Agents adverse effects, Clozapine adverse effects, Schizophrenia drug therapy, Tachycardia chemically induced
- Published
- 2017
- Full Text
- View/download PDF
26. Neuromyelitis optica presenting as acute bilateral ptosis.
- Author
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Joshi P, Lanford J, and Bourke D
- Subjects
- Aged, Blepharoptosis blood, Blepharoptosis drug therapy, Diagnosis, Differential, Female, Humans, Immunoglobulins, Intravenous therapeutic use, Neuromyelitis Optica blood, Neuromyelitis Optica drug therapy, Blepharoptosis diagnostic imaging, Neuromyelitis Optica diagnostic imaging
- Abstract
Acute bilateral ptosis can be a hallmark of several serious neurological conditions. We present the first case of acute bilateral near-complete ptosis secondary to neuromyelitis optica spectrum disorder. We suggest that clinicians should consider this disorder among the differential diagnosis of acute bilateral ptosis, especially if there are other brainstem signs., (Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/.)
- Published
- 2017
- Full Text
- View/download PDF
27. A Direct Oral Anticoagulant as a Cost Effective Alternative to Warfarin for Treatment of Provoked Venous Thrombosis.
- Author
-
Courtney W, Groarke E, Conway J, Conway E, Bourke D, Saunders J, Watts M, and O'Keefe D
- Subjects
- Anticoagulants administration & dosage, Costs and Cost Analysis, Drug Costs, Factor Xa Inhibitors administration & dosage, Female, Humans, Ireland, Male, Rivaroxaban administration & dosage, Secondary Prevention economics, Venous Thrombosis etiology, Warfarin administration & dosage, Anticoagulants economics, Factor Xa Inhibitors economics, Rivaroxaban economics, Venous Thrombosis drug therapy, Warfarin economics
- Abstract
In Ireland, Warfarin is the primary anticoagulant prescribed in the secondary prevention of provoked DVT. We completed a comprehensive cost analysis of a trial group of 24 patients treated with Rivaroxaban (between November 2013 and December 2014), versus a control group treated with Warfarin (between January 2008 and November 2013). The groups were matched for gender (3/7 M/F ratio), DVT type (5 proximal, 19 distal DVTs), provoking factor (20 traumatic, 4 atraumatc), and age. We calculated the cost for each group based on drug administration and clinic costs (labour, sample analysis, and additional costs). Warfarin patients attended clinic 14.58 times; Rivaroxaban patients attended 2.92 times. Overall, the cost per patient on Rivaroxaban is €273.30 versus €260.68 with warfarin. This excludes patient costs which would further increase cost of Warfarin therapy.
- Published
- 2016
28. A taxing case.
- Author
-
Bourke D and Wing L
- Published
- 2016
- Full Text
- View/download PDF
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