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Mesopelagic communities are characterized by a large biomass of diverse macrozooplankton and micronekton (MM) performing diel vertical migration (DVM) connecting the surface to the deeper ocean and contributing to biogeochemical fluxes. In the Southern Ocean, a prominent High Nutrient Low Chlorophyll (HNLC) and low carbon export region, the contribution of MM to the vertical carbon flux of the biological pump remains largely unknown. Furthermore, few studies have investigated MM communities and vertical flux in naturally iron fertilized areas associated with shallow bathymetry. In this study, we assessed the MM community diversity, abundance and biomass in the Kerguelen Island region, including two stations in the HNLC region upstream of the islands, and two stations in naturally iron fertilized areas, one on the Plateau, and one downstream of the Plateau. The MM community was examined using a combination of trawl sampling and acoustic measurements at 18 and 38 kHz from the surface to 800 m. A conspicuous three-layer vertical system was observed in all areas - a shallow scattering layer, SSL, between 10 and 200 m; mid-depth scattering layer, MSL, between 200 and 500 m; deep scattering layer, DSL, between 500 and 800 m - but communities differing among stations. While salps (Salpa thompsoni) dominated the biomass at the productive Kerguelen Plateau and the downstream station, they were scarce in the HNLC upstream area. In addition, crustaceans (mainly Euphausia vallentini and Themisto gaudichaudii) were particularly abundant over the Plateau, representing a large, although varying, carbon stock in the 0–500 m water layer. Mesopelagic fish were prominent below 400 m where they formed permanent or migrant layers accounting for the main source of carbon biomass. Through these spatial and temporal sources of variability, complex patterns of the MM vertical distribution and associated carbon content were identified. The total carbon flux mediated by migratory myctophids a

For top consumers in marine environments, trophic discrimination factors (∆13C and ∆15N) between food and consumers’ tissues are expected to be similar among related species. However, few studies conducted in the laboratory indicate a large variability among species, which should be potentially higher in free-ranging animals. Here, we test for differences in tissue-specific ∆13C and ∆15N values of two wild penguin species (Chinstrap Pygoscelis antarctica and Gentoo P. papua) breeding in sympatry at Livingston Island, Antarctica. A total of 41 adults and 28 chicks, and food items comprised exclusively by Antarctic krill (Euphausia superba, n = 22) in Chinstraps and almost exclusively in Gentoos, were sampled for stable isotope analyses. Overall, Δ13C values varied between -1.8 and 4.0 ‰ and Δ15N values ranged from 1.2 to 6.1 ‰, and these differed between species, tissues and age-classes. Δ13C in adult penguins differed between species for feather and blood. Species-specific differences in Δ13C and Δ15N were seen in chick nail and muscle, while only Δ13C values differed between species in feathers. Our results show that trophic discrimination factors can differ substantially between closely related species consuming similar prey, especially in Δ13C value. Variation in Δ13C was driven by species, tissue and age-class, while variation in Δ15N was mostly driven by tissue type. Trophic discrimination factors may be associated to physiological and/or stress factors which may fluctuate in the wild, and this was particularly evident on chicks. This study highlights the use of diet-specialised species for the determination of trophic discrimination factors in the wild.

Cephalopods are an important component of Southern Ocean food webs but studies analysing their habitat and trophic ecology are scarce. Here, we use the Antarctic toothfish Dissostichus mawsoni as a biological sampler of the Southern Ocean's cephalopods in the Ross, Amundsen, and D'Urville Seas. Ten cephalopod taxa were identified in the diet of the Antarctic toothfish, with Pareledone turqueti and Moroteuthopsis longimana being the only species present in all the three studied areas. DNA analysis conducted on squid flesh samples allowed identification of eight and two specimens of Mesonychoteuthis hamiltoni and M. longimana, respectively, proving this technique as a useful tool to improve the knowledge of cephalopods biodiversity and biogeography in the Southern Ocean. Stable isotopes were used to compare the habitat (δ13C) and trophic ecology (δ15N) between two life-stages of the two most abundant squid species (M. longimana and Psychroteuthis glacialis) from the D'Urville Sea (both squid species) and Amundsen Sea (only P. glacialis). Higher δ13C values in M. longimana suggest that this species inhabits waters near the Antarctic Polar Front, with incursions into sub-Antarctic waters, whilst P. glacialis spends its entire life in Antarctic waters. The most recently deposited part of the beak is enriched in 15N suggesting an increase in trophic level during squid growth. These results give us the first insights into the bathyal distribution of cephalopods in the Amundsen and D'Urville Seas, as well as into the ontogenetic changes of two of the most consumed squid species by top predators in this region. Such results are an important step towards improving the biogeography of Antarctic cephalopods, being of utmost importance to understand the biodiversity, food web structure, and functioning of this region.

Cephalopods play a major role in marine ecosystems, yet very little is known about the dynamics of their habitat use and trophic ecology across the stages of their life cycle, particularly in the Southern Ocean. Here, we used stable isotope analyses of δ13C (a proxy for foraging habitat) and δ15N (a proxy for trophic position) to investigate the habitat use and trophic ecology of 10 squid species, collected from the diet of Antipodean (Diomedea antipodensis antipodensis) and Gibson’s (D. a. gibsoni) albatrosses breeding at Antipodes and Adams Island (South Pacific), respectively. We analyzed isotopes in 2 sections of squid lower beaks, representing 2 stages of the life cycle: the tip of the rostrum (juvenile stage) and the wing (adult stage). Higher δ13C values in early life stages (-20.8 ± 1.7‰) than in adult life stages (-21.6 ± 1.9‰) suggest that Southern Ocean squids tend to move southwards as they grow, with oceanic fronts being an important habitat for these species. Our results also suggest that adults may move southwards with climate change, possibly impacting top predators living on northern islands. Overall, δ15N values revealed an increase in trophic position from early (6.7 ± 2.7‰) to adult life stages (9.0 ± 2.5‰) in all species. Nevertheless, significant differences between δ15N values of the 10 species, in both beak sections, suggest different feeding strategies between species and life stages.

Understanding the underlying ecological factors that affect the distribution patterns of organisms is vital for their conservation. Cephalopods such as giant warty squids Moroteuthopsis longimana are important in the diets of marine predators, including grey-headed albatrosses Thalassarche chrysostoma, yet our understanding of their habitat and trophic ecology remains limited. We investigated the habitat and trophic niche utilised by M. longimana through the δ13C and δ15N profiles captured in their beaks. M. longimana beaks were collected around grey-headed albatross nests at the Prince Edward Islands during 2004 and 2013 (n = 40 beaks). The results showed distinctly Antarctic distributions (δ13C = -24.0 ± 1.0‰, mean ± SD) for M. longimana, consistent with albatrosses foraging at the Southwest Indian Ridge, as opposed to broader foraging zones utilised by albatrosses from Îles Crozet and Îles Kerguelen. Slightly lower δ15N values (5.4 ± 0.7‰) were found compared to other islands in the Indian Sector of the Southern Ocean, which may indicate more crustaceans in the squid diets. Sequential sampling along the lateral walls of individual beaks (n = 4) revealed ontogenetic shifts in δ13C and δ15N values, but individual variation in these shifts requires further investigation.

The non-breeding period plays a major role in seabird survival and population dynamics. However, our understanding of the migratory behaviour, moulting and feeding strategies of non-breeding seabirds is still very limited, especially for small-sized species. The present study investigated the post-breeding behaviour of three distant populations (Kerguelen Archipelago, southeastern Australia, New Zealand) of the common diving petrel (CDP) (Pelecanoides urinatrix), an abundant, widely distributed zooplanktivorous seabird breeding throughout the southern Atlantic, Indian and Pacific oceans. The timing, geographical destination and activity pattern of birds were quantified through geolocator deployments during the post-breeding migration, while moult pattern of body feathers was investigated using stable isotope analysis. Despite the high energetic cost of flapping flight, all the individuals quickly travelled long distances (greater than approx. 2500 km) after the end of the breeding season, targeting oceanic frontal systems. The three populations, however, clearly diverged spatially (migration pathways and destinations), and temporally (timing and duration) in their post-breeding movements, as well as in their period of moult. Philopatry to distantly separated breeding grounds, different breeding phenologies and distinct post-breeding destinations suggest that the CDP populations have a high potential for isolation, and hence, speciation. These results contribute to improving knowledge of ecological divergence and evolution between populations, and inform the challenges of conserving migratory species.

Early life-history stages of cephalopods are known to play an important role as prey in food webs of the Southern Ocean, but little information is available about their biology and availability to predators. Top predators, such as penguins, are known to feed regularly on coastal juvenile/sub-adult cephalopods. Using eastern rockhopper penguins Eudyptes filholi as coastal biological samplers, we examined in detail the cephalopod component of their diet in Campbell Island (New Zealand) during two consecutive breeding seasons in order to evaluate (1) the relative importance of cephalopods (by frequency of occurrence, by number and by mass) to the diet of both adult and chick penguins, (2) the habitat and trophic levels of the cephalopods in the region and (3) the status of the juvenile/sub-adult cephalopod community in the waters around Campbell Island. Our results show that eastern rockhopper penguins feed on eight species of juvenile and sub-adult cephalopods, with Onykia ingens, Martialia hyadesi and Octopus campbelli being the most important species by frequency of occurrence, number and mass. Differences between the diets of adult and chick penguins and between breeding seasons were found. Habitat (δ13C) and trophic level (δ15N) information also showed that all cephalopod species (and all studied stages) occupy similar habitat on the Campbell shelf, with M. hyadesi showing lower δ15N values than O. ingens and O. campbelli. This study indicates that eastern rockhopper penguins can be valuable biological samplers of local juvenile/sub-adult cephalopods (including poorly known cephalopod species) around Campbell Island when breeding, that these cephalopods were likely to be caught naturally (not from fisheries), providing relevant information for the conservation of these penguins.

Information is needed on how anomalous environmental conditions affect important Antarctic ecological sentinels during the winter. Using a non-invasive method (scats), the diet of non-breeding gentoo penguins Pygoscelis papua at Bird Island, South Georgia, was examined during the winter of 2009 when local environmental conditions were abnormal (e.g. warmer sea surface waters). Scats were collected every 2 weeks from May until October 2009 (N = 168); the diet was dominated by the amphipod Themisto gaudichaudii by frequency of occurrence (77.5% of the samples) and by number (70.5% of the total individuals). By mass, different species of crustaceans (T. gaudichaudii and Antarctic krill Euphausia superba) and fish (Champsocephalus gunnari, Lepidonotothen larseni and Pseudochaenichthys georgianus) were the most important in different periods. Numerically, prey switching occurred at the end of winter, when E. superba became more abundant in the penguins’ diets in late September and early October (austral spring), when sea surface temperatures became colder. T. gaudichaudii is sub-optimal prey for gentoo penguins and its consumption most likely reflects a lack of E. superba in local waters. The consumption of T. gaudichaudii and fish, in place of E. superba, was probably insufficient for the penguins to maintain a body condition suitable for reproduction, contributing to the observed late commencement of breeding (i.e. 2–3 weeks) that year. Our results highlight the sensitivity of gentoo penguin populations to variations in environmental conditions, particularly in terms of how these conditions affect the availability of preferred dietary items and potential follow-on effects in the subsequent breeding season.

© 2017 McInnes, Jarman, Lea, Raymond, Deagle, Phillips, Catry, Stanworth, Weimerskirch, Kusch, Gras, Cherel, Maschette and Alderman Almost all of the world's fisheries overlap spatially and temporally with foraging seabirds, with impacts that range from food supplementation (through scavenging behind vessels), to resource competition and incidental mortality. The nature and extent of interactions between seabirds and fisheries vary, as does the level and efficacy of management and mitigation. Seabird dietary studies provide information on prey diversity and often identify species that are also caught in fisheries, providing evidence of linkages which can be used to improve ecosystem based management of fisheries. However, species identification of fish can be difficult with conventional dietary techniques. The black-browed albatross (Thalassarche melanophris) has a circumpolar distribution and has suffered major population declines due primarily to incidental mortality in fisheries. We use DNA metabarcoding of black-browed albatross scats to investigate their fish prey during the breeding season at six sites across their range, over two seasons. We identify the spatial and temporal diversity of fish in their diets and overlaps with fisheries operating in adjacent waters. Across all sites, 51 fish species from 33 families were identified, with 23 species contributing >10% of the proportion of samples or sequences at any site. There was extensive geographic variation but little inter-annual variability in fish species consumed. Several fish species that are not easily accessible to albatross, but are commercially harvested or by-caught, were detected in the albatross diet during the breeding season. This was particularly evident at the Falkland Islands and Iles Kerguelen where higher fishery catch amounts (or discard amounts where known) corresponded to higher occurrence of these species in diet samples. This study indicates ongoing interactions with fisheries thro

Individual specialization is widespread among wild populations. While its fitness consequences are central in predicting the ecological and evolutionary trajectories of populations, they remain poorly understood. Long-term individual foraging specializations occur in male Antarctic (Arctocephalus gazella) and Australian (A. pusillus doriferus) fur seals. Strong selective pressure is expected in these highly dimorphic and polygynous species, raising the question of the fitness payoffs associated with different foraging strategies. We investigated the relationship between individual isotopic niche (a proxy of foraging specialization), body size and condition, and an index of reproductive success (harem size) in territorial males. Individuals varied greatly in their skin and fur isotopic values reflecting a range of foraging strategies within the two populations. However, in both species, isotopic niche was not correlated to body size, condition or mating success (R (2)/ρ < 0.06). Furthermore, no foraging niche was predominant in either species, which would have indicated a substantial long-term fitness benefit of a particular strategy via a higher survival rate. These results suggest that the fitness consequences of a foraging strategy depend not only on the quality of prey and feeding habitat but also on an individual's hunting efficiency and skills.

Investigating the ontogeny of niche differentiation enables to determine at which life-stages sexual segregation arises, providing insights into the main factors driving resource partitioning. We investigated the ontogeny of foraging ecology in Antarctic fur seals (Arctocephalus gazella), a highly dimorphic species with contrasting breeding strategies between sexes. Sequential δ(13)C and δ(15)N values of whiskers provided a longitudinal proxy of the foraging niche throughout the whole life of seals, from weaning, when size dimorphism is minimal to the age of 5. Females exhibited an early-life ontogenetic shift, from a total segregation during their first year at-sea, to a similar isotopic niche as breeding females as early as age 2. In contrast, males showed a progressive change in isotopic niche throughout their development such that 5-year-old males did not share the same niche as territorial bulls. Interestingly, males and females segregated straight after weaning with males appearing to feed in more southerly habitats than females. This spatial segregation was of similar amplitude as observed in breeding adults and was maintained throughout development. Such early-life niche differentiation is an unusual pattern and indicates size dimorphism and breeding constraints do not directly drive sexual segregation contrary to what has been assumed in otariid seals.