1. Establishment of a cost-effective method to detect FLT-ITD and D835 mutations in acute myeloid leukemia patients in the Taiwanese population
- Author
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Ching Huai Ko, Kuei Fang Lee, Hsingjin Eugene Liu, Freda Lam, and Lawrence Shih-Hsin Wu
- Subjects
Medicine(all) ,Mutation ,education.field_of_study ,Acute myeloid leukemia ,FLT3-ITD ,business.industry ,Population ,Myeloid leukemia ,General Medicine ,Gene mutation ,medicine.disease_cause ,Bioinformatics ,law.invention ,law ,Cancer research ,medicine ,Gene chip analysis ,Microsatellite ,FLT3-D835 ,Personalized medicine ,business ,education ,Polymerase chain reaction - Abstract
Objective The FMS-related tyrosine kinase 3 ( FLT-3 ) gene is a hematopoietic growth factor receptor gene, an independent negative prognostic factor, which affects the proliferation and differentiation of stem cells or hematopoietic progenitor cells. Patients with FLT-3 gene mutations have a worse prognosis and responsiveness to chemotherapy than those without these mutations. Our study aims to establish a conventional detection method for FLT3-ITD and D835 mutations in patients with acute myeloid leukemia (AML). Materials and methods In this study, we recruited 100 patients with AML. Primers were designed to distinguish between wild-type FLT-3 , FLT3-ITD , and D835 variants. Methods using a polymerase chain reaction (PCR)-Agilent 2100 Bioanalyzer, PCR-ABI PRISM 3100 Genetic Analyzer, and PCR–agarose gel electrophoresis were compared. Results A high-accuracy, easily operated, low-cost technique to detect the FLT-3 variation with 99.9% specificity was established in this study. The PCR platform, the Agilent 2100 Bioanalyzer (plus DNA 1000 LabChip kit) chip analysis platform, and the ABI PRISM 3100 Genetic Analyzer (plus GeneScan-500 size standard) short tandem repeat (STR) fluorescence analysis platform were used in different experimental comparisons. The ABI PRISM 3100 Genetic Analyzer (plus GeneScan-500 size standard) STR fluorescence analysis platform was the most suitable method to detect FLT3 variants. This method has a high degree of sensitivity, accuracy, and a specificity of 99.9%. Conclusion AML with the homozygous mutated FLT-3 may have a worse cure rate than AML with heterozygous mutation. This mutation is not related to drug resistance, but is a factor in a high risk of relapse; it is also related to unfavorable overall survival. Our designed detection methods should provide key information to develop personalized medicine for AML patients.
- Published
- 2015
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