30 results on '"LODDO R."'
Search Results
2. A combined in silico / in vitro approach unveils common molecular requirements for efficient BVDV RdRp binding of linear aromatic N-polycyclic systems
- Author
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Carta, A., primary, Briguglio, I., additional, Piras, S., additional, Corona, P., additional, Ibba, R., additional, Laurini, E., additional, Fermeglia, M., additional, Pricl, S., additional, Desideri, N., additional, Atzori, E.M., additional, La Colla, P., additional, Collu, G., additional, Delogu, I., additional, and Loddo, R., additional
- Published
- 2016
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3. Synthesis and Antiviral Evaluation of 1-[(2-Phenoxyethyl)oxymethyl] and 6-(3,5-Dimethoxybenzyl) Analogues of HIV Drugs Emivirine and TNK-651
- Author
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El-Brollosy, N., additional and Loddo, R., additional
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- 2015
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4. Synthesis and Antiviral Evaluation of 1-[(2-Phenoxyethyl) oxymethyl] and 6-(3,5-Dimethoxybenzyl) Analogues of HIV Drugs Emivirine and TNK-651.
- Author
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El-Brollosy, N. R. and Loddo, R.
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- 2016
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5. Synthesis and Antiviral Evaluation of 1-[(2-Phenoxyethyl)oxymethyl] and 6-(3,5-Dimethoxybenzyl) Analogues of HIV Drugs Emivirine and TNK-651
- Author
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El-Brollosy, N. R. and Loddo, R.
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- 2016
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6. A combined in silico/in vitro approach unveils common molecular requirements for efficient BVDV RdRp binding of linear aromatic N-polycyclic systems
- Author
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Paola Corona, Gabriella Collu, R. Loddo, Antonio Carta, Irene Briguglio, Elena Maria Atzori, Maurizio Fermeglia, Sabrina Pricl, P. La Colla, Roberta Ibba, Erik Laurini, Nicoletta Desideri, Ilenia Delogu, Sandra Piras, Carta, A., Briguglio, I., Piras, S., Corona, P., Ibba, R., Laurini, Erik, Fermeglia, Maurizio, Pricl, Sabrina, Desideri, N., Atzori, E. M., La Colla, P., Collu, G., Delogu, I., and Loddo, R.
- Subjects
Models, Molecular ,Stereochemistry ,viruses ,In silico ,enzymatic activity ,RNA-dependent RNA polymerase ,Plasma protein binding ,010402 general chemistry ,01 natural sciences ,Antiviral Agents ,chemistry.chemical_compound ,Bovine viral diarrhea virus ,Rna dependent Rna Polymerase ,antiviral drug design and development ,computer-assisted drug design ,protein expression ,Drug Discovery ,Animals ,bovine viral diarrhea virus (BVDV) ,RNA-dependent RNA polymerase (RdRp) inhibitors ,Imidazo[4,5-g]quinoline ,pyrido[2,3-g]quinoxaline ,aromatic N-polycyclic systems ,Binding site ,Polycyclic Aromatic Hydrocarbons ,NS5B ,Polymerase ,Pharmacology ,Bovine viral diarrhea viru ,Binding Sites ,Diarrhea Viruses, Bovine Viral ,biology ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,Hydrogen Bonding ,General Medicine ,RNA-Dependent RNA Polymerase ,0104 chemical sciences ,Biochemistry ,Docking (molecular) ,biology.protein ,Bovine Virus Diarrhea-Mucosal Disease ,Cattle ,Pharmacophore - Abstract
In this work, we present and discuss a comprehensive set of both newly and previously synthesized compounds belonging to 5 distinct molecular classes of linear aromatic N-polycyclic systems that efficiently inhibits bovine viral diarrhea virus (BVDV) infection. A coupled in silico/in vitro investigation was employed to formulate a molecular rationale explaining the notable affinity of all molecules to BVDV RNA dependent RNA polymerase (RdRp) NS5B. We initially developed a three-dimensional common-feature pharmacophore model according to which two hydrogen bond acceptors and one hydrophobic aromatic feature are shared by all molecular series in binding the viral polymerase. The pharmacophoric information was used to retrieve a putative binding site on the surface of the BVDV RdRp and to guide compound docking within the protein binding site. The affinity of all compounds towards the enzyme was scored via molecular dynamics-based simulations, showing high correlation with in vitro EC50 data. The determination of the interaction spectra of the protein residues involved in inhibitor binding highlighted amino acids R295 and Y674 as the two fundamental H-bond donors, while two hydrophobic cavities HC1 (residues A221, I261, I287, and Y289) and HC2 (residues V216, Y303, V306, K307, P408, and A412) fulfill the third pharmacophoric requirement. Three RdRp (K263, R295 and Y674) residues critical for drug binding were selected and mutagenized, both in silico and in vitro, into alanine, and the affinity of a set of selected compounds towards the mutant RdRp isoforms was determined accordingly. The agreement between predicted and experimental data confirmed the proposed common molecular rationale shared by molecules characterized by different chemical scaffolds in binding to the BVDV RdRp, ultimately yielding compound 6b (EC50 = 0.3 μM; IC50 = 0.48 μM) as a new, potent inhibitor of this Pestivirus.
- Published
- 2016
7. Design, Synthesis, and Antiviral Activities of New Benzotriazole-Based Derivatives.
- Author
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Ibba R, Corona P, Nonne F, Caria P, Serreli G, Palmas V, Riu F, Sestito S, Nieddu M, Loddo R, Sanna G, Piras S, and Carta A
- Abstract
Several human diseases are caused by enteroviruses and are currently clinically untreatable, pushing the research to identify new antivirals. A notable number of benzo[ d ][1,2,3]triazol-1(2)-yl derivatives were designed, synthesized, and in vitro evaluated for cytotoxicity and antiviral activity against a wide spectrum of RNA positive- and negative-sense viruses. Five of them ( 11b , 18e , 41a , 43a , 99b ) emerged for their selective antiviral activity against Coxsackievirus B5, a human enteroviruses member among the Picornaviridae family. The EC
50 values ranged between 6 and 18.5 μM. Among all derivatives, compounds 18e and 43a were interestingly active against CVB5 and were selected to better define the safety profile on cell monolayers by transepithelial resistance test (TEER). Results indicated compound 18e as the hit compound to investigate the potential mechanism of action by apoptosis assay, virucidal activity test, and the time of addition assay. CVB5 is known to be cytotoxic by inducing apoptosis in infected cells; in this study, compound 18e was proved to protect cells from viral infection. Notably, cells were mostly protected when pre-treated with derivative 18e , which had, however, no virucidal activity. From the performed biological assays, compound 18e turned out to be non-cytotoxic as well as cell protective against CVB5 infection, with a mechanism of action ascribable to an interaction on the early phase of infection, by hijacking the viral attachment process.- Published
- 2023
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8. Benzimidazole-2-Phenyl-Carboxamides as Dual-Target Inhibitors of BVDV Entry and Replication.
- Author
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Ibba R, Riu F, Delogu I, Lupinu I, Carboni G, Loddo R, Piras S, and Carta A
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- Animals, Antiviral Agents pharmacology, Benzimidazoles pharmacology, Cattle, Sheep, Swine, Diarrhea Viruses, Bovine Viral, Pestivirus
- Abstract
Bovine viral diarrhea virus (BVDV), also known as Pestivirus A, causes severe infection mostly in cattle, but also in pigs, sheep and goats, causing huge economical losses on agricultural farms every year. The infections are actually controlled by isolation of persistently infected animals and vaccination, but no antivirals are currently available to control the spread of BVDV on farms. BVDV binds the host cell using envelope protein E2, which has only recently been targeted in the research of a potent and efficient antiviral. In contrast, RdRp has been successfully inhibited by several classes of compounds in the last few decades. As a part of an enduring antiviral research agenda, we designed a new series of derivatives that emerged from an isosteric substitution of the main scaffold in previously reported anti-BVDV compounds. Here, the new compounds were characterized and tested, where several turned out to be potent and selectively active against BVDV. The mechanism of action was thoroughly studied using a time-of-drug-addition assay and the results were validated using docking simulations.
- Published
- 2022
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9. Synthesis, Antitumor and Antiviral In Vitro Activities of New Benzotriazole-Dicarboxamide Derivatives.
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Ibba R, Piras S, Corona P, Riu F, Loddo R, Delogu I, Collu G, Sanna G, Caria P, Dettori T, and Carta A
- Abstract
Cancer and viral infections continue to threaten humankind causing death worldwide. Hence, the discovery of new anticancer and antiviral agents still represents a major scientific goal. Heterocycles designed to mimic the chemical structure of natural pyrimidines and purines have been designed over the years, exerting their activity acting as false substrates on several different targets. We reported a series of bis-benzotriazole-dicarboxamide derivatives which inhibit viral helicase of poliovirus, and hence we planned structure modifications to obtain different series of new dicarboxamides. Here, the synthesis and characterization of 56 new compounds: 31 bis-benzotriazole dicarboxamides and 25 mono-substituted acidic derivatives are reported. The synthesized compounds were tested for their antiviral and antitumor activity. Mostly, compounds 4a , 4c and 4d showed antiviral activity against tested Picornaviruses, Coxsackievirus B5 and Poliovirus-1. Likewise, four derivatives ( 3b , 3d , 4d , 9b ) showed notable antiproliferative activity inhibiting cell growth in two distinct antitumor screenings. Compound 3b was selected as the antitumor lead compound for the wide range of activity and the potency proved. The lead compound was proved to induce apoptosis in SK-MES1 tumor cells, in a dose-dependent manner., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Ibba, Piras, Corona, Riu, Loddo, Delogu, Collu, Sanna, Caria, Dettori and Carta.)
- Published
- 2021
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10. Inhibition of Enterovirus A71 by a Novel 2-Phenyl-Benzimidazole Derivative.
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Ibba R, Carta A, Madeddu S, Caria P, Serreli G, Piras S, Sestito S, Loddo R, and Sanna G
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- Animals, Caco-2 Cells, Chlorocebus aethiops, Hand, Foot and Mouth Disease virology, HeLa Cells, Humans, Vero Cells, Viral Load, Viral Plaque Assay, Antiviral Agents pharmacology, Apoptosis drug effects, Benzimidazoles pharmacology, Enterovirus A, Human drug effects
- Abstract
Enterovirus A71 (EV-A71) infection has emerged as a significant public health concern atthe global level. Epidemic events of EV-A71 have been reported worldwide, and this succession of outbreaks has heightened concern that EV-A71 may become a public health threat. In recent years, widespread A71 enterovirus also occurred in European countries. EV-A71 infection causes hand-foot-mouth disease (HFMD), herpangina, and fever. However, it can sometimes induce a variety of neurological complications, including encephalitis, aseptic meningitis, pulmonary edema, and acute flaccid paralysis. We identified new benzimidazole derivatives and described their in vitro cytotoxicity and broad-spectrum anti-enterovirus activity. Among them, derivative 2b resulted in interesting activity against EV-A71, and therefore it was selected for further investigations. Compound 2b proved to be able to protect cell monolayers from EV-A71-induced cytopathogenicity, with an EC
50 of 3 µM. Moreover, Vero-76 cells resulted in being significantly protected from necrosis and apoptosis when treated with 2b at 20 and 80 µM. Compound 2b reduced viral adsorption to Vero-76 cells, and when evaluated in a time-of-addition assay, the derivative had the highest effect when added during the infection period. Moreover, derivative 2b reduced viral penetration into host cells. Besides, 2b did not affect intestinal monolayers permeability, showing no toxic effects. A detailed insight into the efficacy of compound 2b against EV-A71 showed a dose-dependent reduction in the viral titer, also at low concentrations. Mechanism of action investigations suggested that our derivative can inhibit viral endocytosis by reducing viral attachment to and penetration into host cells. Pharmacokinetic and toxicity predictions validated compound 2b as a good candidate for further in vivo assays.- Published
- 2021
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11. 5,6-Dichloro-2-phenyl-benzotriazoles: New Potent Inhibitors of Orthohantavirus.
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Sanna G, Piras S, Madeddu S, Busonera B, Klempa B, Corona P, Ibba R, Murineddu G, Carta A, and Loddo R
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- Animals, Antiviral Agents chemistry, Chlorocebus aethiops, Drug Discovery, Vero Cells, Antiviral Agents pharmacology, Orthohantavirus drug effects, Triazoles chemistry, Triazoles pharmacology
- Abstract
Orthohantaviruses, previously known as hantaviruses (family Hantaviridae, order Bunyavirales), are emerging zoonoses hosted by different rodent and insectivore species. Orthohantaviruses are transmitted by aerosolized excreta (urine, saliva and feces) of their reservoir hosts. When transmitted to humans, they cause hemorrhagic fever with renal syndrome (HFRS) in Asia and Europe and hantavirus (cardio) pulmonary syndrome (HPS) in the Americas. Clinical studies have shown that early treatments of HFRS patients with ribavirin (RBV) improve prognosis. Nevertheless, there is the need for urgent development of specific antiviral drugs. In the search for new RNA virus inhibitors, we recently identified a series of variously substituted 5,6-dichloro-1(2)-phenyl-1(2)H-benzo[d][1,2,3]triazole derivatives active against the human respiratory syncytial virus (HRSV). Interestingly, several 2-phenyl-benzotriazoles resulted in fairly potent inhibitors of the Hantaan virus in a chemiluminescence focus reduction assay (C-FRA) showing an EC
50 = 4-5 µM, ten-fold more active than ribavirin. Currently, there are no FDA approved drugs for the treatment of orthohantavirus infections. Antiviral activities and cytotoxicity profiles suggest that 5,6-dichloro-1(2)-phenyl-1(2)H-benzo[d][1,2,3]triazoles could be promising candidates for further investigation as a potential treatment of hantaviral diseases.- Published
- 2020
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12. Preliminary Anti-Coxsackie Activity of Novel 1-[4-(5,6-dimethyl(H)- 1H(2H)-benzotriazol-1(2)-yl)phenyl]-3-alkyl(aryl)ureas.
- Author
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Piras S, Corona P, Ibba R, Riu F, Murineddu G, Sanna G, Madeddu S, Delogu I, Loddo R, and Carta A
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- Animals, Antiviral Agents chemical synthesis, Antiviral Agents chemistry, Chlorocebus aethiops, Microbial Sensitivity Tests, Molecular Structure, Urea analogs & derivatives, Urea chemistry, Vero Cells, Antiviral Agents pharmacology, Enterovirus B, Human drug effects, Poliovirus drug effects, Urea pharmacology
- Abstract
Background: Coxsackievirus infections are associated with cases of aseptic meningitis, encephalitis, myocarditis, and some chronic disease., Methods: A series of benzo[d][1,2,3]triazol-1(2)-yl derivatives (here named benzotriazol-1(2)-yl) (4a-i, 5a-h, 6a-e, g, i, j and 7a-f, h-j) were designed, synthesized and in vitro evaluated for cytotoxicity and antiviral activity against two important human enteroviruses (HEVs) members of the Picornaviridae family [Coxsackievirus B 5 (CVB-5) and Poliovirus 1 (Sb-1)]., Results: Compounds 4c (CC50 >100 μM; EC50 = 9 μM), 5g (CC50 >100 μM; EC50 = 8 μM), and 6a (CC50 >100 μM; EC50 = 10 μM) were found active against CVB-5. With the aim of evaluating the selectivity of action of this class of compounds, a wide spectrum of RNA (positive- and negativesense), double-stranded (dsRNA) or DNA viruses were also assayed. For none of them, significant antiviral activity was determined., Conclusion: These results point towards a selective activity against CVB-5, an important human pathogen that causes both acute and chronic diseases in infants, young children, and immunocompromised patients., (Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.net.)
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- 2020
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13. Dichloro-Phenyl-Benzotriazoles: A New Selective Class of Human Respiratory Syncytial Virus Entry Inhibitors.
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Piras S, Sanna G, Carta A, Corona P, Ibba R, Loddo R, Madeddu S, Caria P, Aulic S, Laurini E, Fermeglia M, and Pricl S
- Abstract
Human Respiratory Syncytial Virus (RSV) is the primary cause of bronchopneumonia in infants and children worldwide. Clinical studies have shown that early treatments of RSV patients with ribavirin improve prognosis, even if the use of this drug is limited due to myelosuppression and toxicity effects. Furthermore, effective vaccines to prevent RSV infection are currently unavailable. Thus, the development of highly effective and specific antiviral drugs for pre-exposure prophylaxis and/or treatment of RSV infections is a compelling need. In the quest of new RSV inhibitors, in this work we evaluated the antiviral activity of a series of variously substituted 5,6-dichloro-1-phenyl-1(2)H-benzo[d][1,2,3]triazole derivatives in cell-based assays. Several 1- and 2-phenyl-benzotriazoles resulted fairly potent (μM concentrations) inhibitors of RSV infection in plaque reduction assays, accompanied by low cytotoxicity in human highly dividing T lymphoid-derived cells and primary cell lines. Contextually, no inhibitory effects were observed against other RNA or DNA viruses assayed, suggesting specific activity against RSV. Further results revealed that the lead compound 10d was active during the early phase of the RSV infection cycle. To understand whether 10d interfered with virus attachment to target cells or virus-cell fusion events, inhibitory activity tests against the RSV mutant strain B1 cp-52-expressing only the F envelope glycoprotein-and a plasmid-based reporter assay that quantifies the bioactivity of viral entry were also performed. The overall biological results, in conjunction with in silico modeling studies, supported the conclusion that the RSV fusion process could be the target of this new series of compounds.
- Published
- 2019
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14. Design, Synthesis, Antiviral Evaluation, and SAR Studies of New 1-(Phenylsulfonyl)-1 H -Pyrazol-4-yl-Methylaniline Derivatives.
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Desideri N, Fioravanti R, Proietti Monaco L, Atzori EM, Carta A, Delogu I, Collu G, and Loddo R
- Abstract
A series of N -((3-phenyl-1-(phenylsulfonyl)-1 H -pyrazol-4-yl)methyl)anilines 7a-p and 8a-l , structurally related to previously synthesized and tested ( N -(1,3-diphenyl-1 H -pyrazol-4-yl)methyl)anilines ( 1a-v ), were designed and synthesized. The new derivatives were evaluated in cell-based assays for their cytotoxicity and antiviral activity against a large panel of RNA and DNA viruses of public health significance. Generally, the tested compounds did not display cytotoxicity toward the cell lines used. The majority of derivatives 7a - p were able to interfered with YFV and RSV replication in the micromolar range showing a marked improvement in potency and selectivity with respect to the reference inhibitors 6-azauridine and ribavirin, respectively. The introduction of a p -methoxy substituent on the phenylsulfonyl group (compounds 8a-l ) completely abolished the anti-RSV activity and reduced or eliminated the potency against YFV. On the contrary, several p -methoxy analogs were able to interfere with BVDV replication with a comparable ( 8b, 8c, 8g , and 8k ) or better ( 8a and 8f ) potency than the reference inhibitor, ribavirin. Compound 7e , selected for time of addition experiments on BHK-21 cell cultures infected with YFV, achieved the highest reduction of virus titer when added 2 h post infection and maintained up to 4 h post infection.
- Published
- 2019
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15. Benzimidazole derivatives endowed with potent antileishmanial activity.
- Author
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Tonelli M, Gabriele E, Piazza F, Basilico N, Parapini S, Tasso B, Loddo R, Sparatore F, and Sparatore A
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- Animals, Antiprotozoal Agents chemical synthesis, Antiprotozoal Agents chemistry, Benzimidazoles chemical synthesis, Benzimidazoles chemistry, Cell Line, Cell Survival drug effects, Chlorocebus aethiops, Dose-Response Relationship, Drug, Humans, Molecular Structure, Parasitic Sensitivity Tests, Structure-Activity Relationship, Vero Cells, Antiprotozoal Agents pharmacology, Benzimidazoles pharmacology, Leishmania infantum drug effects, Leishmania tropica drug effects
- Abstract
Two sets of benzimidazole derivatives were synthesised and tested in vitro for activity against promastigotes of Leishmania tropica and L. infantum. Most of the tested compounds resulted active against both Leishmania species, with IC
50 values in the low micromolar/sub-micromolar range. Among the set of 2-(long chain)alkyl benzimidazoles, whose heterocyclic head was quaternised, compound 8 resulted about 100-/200-fold more potent than miltefosine, even if the selectivity index (SI) versus HMEC-1 cells was only moderately improved. In the set of 2-benzyl and 2-phenyl benzimidazoles, bearing a basic side chain in position 1, compound 28 (2-(4-chlorobenzyl)-1-lupinyl-5-trifluoromethylbenzimidazole) was 12-/7-fold more potent than miltefosine, but exhibited a further improved SI. Therefore, compounds 8 and 28 represent interesting hit compounds, susceptible of structural modification to improve their safety profiles.- Published
- 2018
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16. 9-Aminoacridine-based agents impair the bovine viral diarrhea virus (BVDV) replication targeting the RNA-dependent RNA polymerase (RdRp).
- Author
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Loddo R, Francesconi V, Laurini E, Boccardo S, Aulic S, Fermeglia M, Pricl S, and Tonelli M
- Subjects
- Aminacrine metabolism, Aminacrine pharmacology, Animals, Antiviral Agents chemical synthesis, Antiviral Agents pharmacology, Binding Sites, Calorimetry, Cattle, Diarrhea Viruses, Bovine Viral enzymology, Drug Design, Molecular Docking Simulation, Mutagenesis, Site-Directed, Protein Structure, Tertiary, RNA-Dependent RNA Polymerase genetics, RNA-Dependent RNA Polymerase metabolism, Structure-Activity Relationship, Thermodynamics, Virus Replication drug effects, Aminacrine chemistry, Antiviral Agents chemistry, Diarrhea Viruses, Bovine Viral physiology, RNA-Dependent RNA Polymerase antagonists & inhibitors
- Abstract
Bovine viral diarrhea virus (BVDV) infection is still a plague that causes important livestock pandemics. Despite the availability of vaccines against BVDV, and the implementation of massive eradication or control programs, this virus still constitutes a serious agronomic burden. Therefore, the alternative approach to combat Pestivirus infections, based on the development of antiviral agents that specifically inhibit the replication of these viruses, is of preeminent actuality and importance. Capitalizing from a long-standing experience in antiviral drug design and development, in this work we present and characterize a series of small molecules based on the 9-aminoacridine scaffold that exhibit potent anti-BVDV activity coupled with low cytotoxicity. The relevant viral protein target - the RNA-dependent RNA polymerase - the binding mode, and the mechanism of action of these new antivirals have been determined by a combination of in vitro (i.e., enzymatic inhibition, isothermal titration calorimetry and site-directed mutagenesis assays) and computational experiments. The overall results obtained confirm that these acridine-based derivatives are promising compounds in the treatment of BVDV infections and, based on the reported structure-activity relationship, can be selected as a starting point for the design of a new generation of improved, safe and selective anti-BVDV agents., (Copyright © 2018 Elsevier Ltd. All rights reserved.)
- Published
- 2018
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17. Quinoxaline derivatives as new inhibitors of coxsackievirus B5.
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Carta A, Sanna G, Briguglio I, Madeddu S, Vitale G, Piras S, Corona P, Peana AT, Laurini E, Fermeglia M, Pricl S, Serra A, Carta E, Loddo R, and Giliberti G
- Subjects
- Animals, Antiviral Agents chemical synthesis, Antiviral Agents chemistry, Cattle, Cell Line, Cell Survival drug effects, Cricetinae, Dose-Response Relationship, Drug, Haplorhini, Humans, Microbial Sensitivity Tests, Models, Molecular, Molecular Structure, Quinoxalines chemical synthesis, Quinoxalines chemistry, Structure-Activity Relationship, Antiviral Agents pharmacology, Enterovirus B, Human drug effects, Quinoxalines pharmacology
- Abstract
Enteroviruses are among the most common and important human pathogens for which there are no specific antiviral agents approved by the US Food and Drug Administration so far. Particularly, coxsackievirus infections have a worldwide distribution and can cause many important diseases. We here report the synthesis of new 14 quinoxaline derivatives and the evaluation of their cytotoxicity and antiviral activity against representatives of ssRNA, dsRNA and dsDNA viruses. Promisingly, three compounds showed a very potent and selective antiviral activity against coxsackievirus B5, with EC
50 in the sub-micromolar range (0.3-0.06 μM). A combination of experimental techniques (i.e. virucidal activity, time of drug addition and adsorption assays) and in silico modeling studies were further performed, aiming to understand the mode of action of the most active, selective and not cytotoxic compound, the ethyl 4-[(2,3-dimethoxyquinoxalin-6-yl)methylthio]benzoate (6)., (Copyright © 2017 Elsevier Masson SAS. All rights reserved.)- Published
- 2018
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18. Benzimidazole-based derivatives as privileged scaffold developed for the treatment of the RSV infection: a computational study exploring the potency and cytotoxicity profiles.
- Author
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Cichero E, Tonelli M, Novelli F, Tasso B, Delogu I, Loddo R, Bruno O, and Fossa P
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- Animals, Antiviral Agents chemical synthesis, Antiviral Agents chemistry, Benzimidazoles chemical synthesis, Benzimidazoles chemistry, Cell Line, Chlorocebus aethiops, Dose-Response Relationship, Drug, Humans, Microbial Sensitivity Tests, Models, Molecular, Molecular Structure, Quantitative Structure-Activity Relationship, Vero Cells, Antiviral Agents pharmacology, Benzimidazoles pharmacology, Respiratory Syncytial Viruses drug effects, Respirovirus Infections drug therapy
- Abstract
Respiratory syncytial virus (RSV) has been identified as a main cause of hospitalisation in infants and children. To date, the current therapeutic arsenal is limited to ribavirin and palivizumab with variable efficacy. In this work, starting from a number of in-house series of previously described anti-RSV agents based on the benzimidazole scaffold, with the aim at gaining a better understanding of the related chemical features involved in potency and safety profiles, we applied a computational study including two focussed comparative molecular fields analysis (CoMFA) and comparative molecular similarity indices analysis (CoMSIA). The results allowed us to derive useful suggestions for the design of derivatives and also to set up statistical models predicting the potency and selectivity index (SI = CC
50 /EC50 ) of any new analogue prior to synthesis. Accordingly, here, we discuss preliminary results obtained through the applied exhaustive QSAR analyses, leading to design and synthesise more effective anti-RSV agents.- Published
- 2017
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19. Inhibitors of Yellow Fever Virus replication based on 1,3,5-triphenyl-4,5-dihydropyrazole scaffold: Design, synthesis and antiviral evaluation.
- Author
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Fioravanti R, Desideri N, Carta A, Atzori EM, Delogu I, Collu G, and Loddo R
- Subjects
- Animals, Antiviral Agents chemical synthesis, Antiviral Agents chemistry, Cattle, Cell Line, Cell Survival drug effects, Cricetinae, Dose-Response Relationship, Drug, Haplorhini, Microbial Sensitivity Tests, Molecular Structure, Pyrazoles chemical synthesis, Pyrazoles chemistry, Structure-Activity Relationship, Virus Replication drug effects, Antiviral Agents pharmacology, Drug Design, Pyrazoles pharmacology, Yellow fever virus drug effects
- Abstract
By the antiviral screening of an in house library of pyrazoline compounds, 4-(3-(4-phenoxyphenyl)-5-phenyl-4,5-dihydro-1H-pyrazol-1-yl)benzenesulfonamide (5a) was identified as a promising hit compound for the development of anti- Yellow Fever Virus (YFV) agents. Structural optimization studies were focused on the development of 5a analogues which retain the potency as YFV inhibitors and show a reduced cytotoxicity. The synthesized 1-3,5-triphenyl-pyrazolines (4a-j, 5a-j, 6a-j) were evaluated in cell based assays for cytotoxicity and antiviral activity against representative viruses of two of the three genera of the Flaviviridae family, i.e.: Pestivirus (BVDV) and Flavivirus (YFV). These compounds were also tested against a large panel of different pathogenic RNA and DNA viruses. Most of the new 1-3,5-triphenyl-pyrazolines (4a-j, 5a-j, 6a-j) exhibited a specific activity against YFV, showing EC
50 values in the low micromolar range with almost a 10-fold improvement in potency compared to the reference inhibitor 6-azauridine. However, the selectivity indexes of the unsubstituted (4a-j) and the phenoxy (5a-j) analogues were generally modest due to the pronounced cytotoxicity against BHK-21 cells. Otherwise, the benzyloxy derivatives (6a-j) generally coupled high potency and selectivity. On the basis of both anti-YFV activity and selectivity index, pyrazolines 6a and 6b were chosen for time of addition experiments. The selected pyrazolines and the reference inhibitor 6-azauridine displayed maximal inhibition when added in the pretreatment or during the infection., (Copyright © 2017 Elsevier Masson SAS. All rights reserved.)- Published
- 2017
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20. Host dihydrofolate reductase (DHFR)-directed cycloguanil analogues endowed with activity against influenza virus and respiratory syncytial virus.
- Author
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Tonelli M, Naesens L, Gazzarrini S, Santucci M, Cichero E, Tasso B, Moroni A, Costi MP, and Loddo R
- Subjects
- Antiviral Agents chemical synthesis, Antiviral Agents chemistry, Crystallography, X-Ray, Dose-Response Relationship, Drug, Folic Acid Antagonists chemical synthesis, Folic Acid Antagonists chemistry, Humans, Microbial Sensitivity Tests, Models, Molecular, Molecular Structure, Proguanil chemical synthesis, Proguanil chemistry, Structure-Activity Relationship, Triazines chemical synthesis, Triazines chemistry, Antiviral Agents pharmacology, Folic Acid Antagonists pharmacology, Influenza A Virus, H1N1 Subtype drug effects, Influenza B virus drug effects, Proguanil pharmacology, Respiratory Syncytial Viruses drug effects, Tetrahydrofolate Dehydrogenase metabolism, Triazines pharmacology
- Abstract
We have identified a series of 1-aryl-4,6-diamino-1,2-dihydrotriazines, structurally related to the antimalarial drug cycloguanil, as new inhibitors of influenza A and B virus and respiratory syncytial virus (RSV) via targeting of the host dihydrofolate reductase (DHFR) enzyme. Most analogues proved active against influenza B virus in the low micromolar range, and the best compounds (11, 13, 14 and 16) even reached the sub-micromolar potency of zanamivir (EC
50 = 0.060 μM), and markedly exceeded (up to 327 times) the antiviral efficacy of ribavirin. Activity was also observed for two influenza A strains, including a virus with the S31N mutant form of M2 proton channel, which is the most prevalent resistance mutation for amantadine. Importantly, the compounds displayed nanomolar activity against RSV and a superior selectivity index, since the ratio of cytotoxic to antiviral concentration was >10,000 for the three most active compounds 11, 14 and 16 (EC50 ∼0.008 μM), far surpassing the potency and safety profile of the licensed drug ribavirin (EC50 = 5.8 μM, SI > 43)., (Copyright © 2017 Elsevier Masson SAS. All rights reserved.)- Published
- 2017
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21. Synthesis, structural characterization and biological evaluation of 4'-C-methyl- and phenyl-dioxolane pyrimidine and purine nucleosides.
- Author
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Franchini S, Battisti UM, Sorbi C, Tait A, Cornia A, Jeong LS, Lee SK, Song J, Loddo R, Madeddu S, Sanna G, and Brasili L
- Subjects
- Anti-HIV Agents chemical synthesis, Anti-HIV Agents chemistry, Antineoplastic Agents chemical synthesis, Antineoplastic Agents chemistry, Cell Line, Cell Proliferation drug effects, Crystallography, X-Ray, Dioxolanes chemical synthesis, Dioxolanes chemistry, Dose-Response Relationship, Drug, Drug Screening Assays, Antitumor, Humans, Microbial Sensitivity Tests, Models, Molecular, Molecular Structure, Purine Nucleosides chemical synthesis, Purine Nucleosides chemistry, Pyrimidine Nucleosides chemical synthesis, Pyrimidine Nucleosides chemistry, Structure-Activity Relationship, Anti-HIV Agents pharmacology, Antineoplastic Agents pharmacology, Dioxolanes pharmacology, HIV-1 drug effects, Purine Nucleosides pharmacology, Pyrimidine Nucleosides pharmacology
- Abstract
Nucleoside analogues play an important role in antiviral, antibacterial and antineoplastic chemotherapy. Herein we report the synthesis, structural characterization and biological activity of some 4'-C -methyl- and -phenyl dioxolane-based nucleosides. In particular, α and β anomers of all natural nucleosides were obtained and characterized by NMR, HR-MS and X-ray crystallography. The compounds were tested for antimicrobial activity against some representative human pathogenic fungi, bacteria and viruses. Antitumor activity was evaluated in a large variety of human cancer cell-lines. Although most of the compounds showed non-significant activity, 23α weakly inhibited HIV-1 multiplication. Moreover, 22α and 32α demonstrated a residual antineoplastic activity, interestingly linked to the unnatural α configuration. These results may provide structural insights for the design of active antiviral and antitumor agents.
- Published
- 2017
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22. Activity of bis(7-hydroxycoumarin) Mannich bases against bovine viral diarrhoea virus.
- Author
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Ibrahim MM, Mazzei M, Delogu I, Szabó R, Sanna G, and Loddo R
- Subjects
- Animals, Cattle, Cell Line, Diarrhea virology, Mannich Bases chemical synthesis, Mannich Bases pharmacology, Structure-Activity Relationship, Umbelliferones chemical synthesis, Antiviral Agents pharmacology, Diarrhea veterinary, Diarrhea Viruses, Bovine Viral drug effects, Mannich Bases chemistry, Umbelliferones chemistry, Umbelliferones pharmacology
- Abstract
Some Mannich bases of 7-hydroxycoumarins (3-6) with piperazine or other amines bearing two secondary amine groups were prepared and tested against viruses representative of RNA families. All compounds were symmetrical and possessed two identical coumarin moieties with respect to one diamine. In the series of 7-hydroxy derivatives, 3a was endowed with a significant activity against BVDV. Then, some of these double Mannich bases were alkylated and acylated. Among the propyloxy derivatives, only 3f showed a modest activity against BVDV. Among the acyl derivatives, the p-nitrobenzoyl derivative 3i emerged as the most active compound; in this series, the p-nitrobenzoyl derivative 3j also exhibited good action against BVDV and modest activity against CVB-5. On the whole, the compounds presented here show some differences, with respect to previous studies in terms of SAR from similar Mannich bases of 7-hydroxycoumarin., (Copyright © 2016 Elsevier B.V. All rights reserved.)
- Published
- 2016
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23. Synthesis and Anti-HIV-1 Evaluation of Some Novel MC-1220 Analogs as Non-Nucleoside Reverse Transcriptase Inhibitors.
- Author
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Loksha YM, Pedersen EB, Loddo R, and La Colla P
- Subjects
- Cell Line, Cells, Cultured, HIV-1 drug effects, Microbial Sensitivity Tests, Models, Molecular, Structure-Activity Relationship, Anti-HIV Agents chemical synthesis, Anti-HIV Agents pharmacology, Fluorobenzenes pharmacology, HIV Reverse Transcriptase antagonists & inhibitors, Pyrimidinones pharmacology, Reverse Transcriptase Inhibitors chemical synthesis, Reverse Transcriptase Inhibitors pharmacology
- Abstract
Some novel MC-1220 analogs were synthesized by condensation of 4,6-dichloro-N-methylpyrimidin-2-amine derivatives (1a,b and 15) and/or 4-chloro-6-methoxy-N,N,5-trimethylpyrimidin-2-amine (2a) with the sodium salt of 2,6-difluorophenylacetonitrile followed by treatment with aqueous sodium hydroxide in methanol, alkylation, reduction, halogenation, and/or acidic hydrolysis. All synthesized compounds were evaluated for their activity against HIV-1. The most active compound in this study was compound 7, which showed activity against HIV-1 comparable to that of MC-1220. The only difference in structure between compound 7 and MC-1220 is a fluoro atom instead of a CH3 group., (© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2016
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24. Facile synthesis of the NNRTI microbicide MC-1220 and synthesis of its phosphoramidate prodrugs.
- Author
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Loksha YM, Pedersen EB, La Colla P, and Loddo R
- Subjects
- Amides chemistry, Amides pharmacology, Anti-HIV Agents chemistry, Anti-HIV Agents pharmacology, Cells, Cultured, Dose-Response Relationship, Drug, Fluorobenzenes chemistry, Fluorobenzenes pharmacology, HIV-1 drug effects, Humans, Microbial Sensitivity Tests, Molecular Structure, Phosphoric Acids chemistry, Phosphoric Acids pharmacology, Prodrugs chemistry, Prodrugs pharmacology, Pyrimidinones chemistry, Pyrimidinones pharmacology, Structure-Activity Relationship, Amides chemical synthesis, Anti-HIV Agents chemical synthesis, Fluorobenzenes chemical synthesis, Phosphoric Acids chemical synthesis, Prodrugs chemical synthesis, Pyrimidinones chemical synthesis
- Abstract
A facile and novel synthetic route to MC-1220 was achieved by condensation of 4,6-dichloro-N,N-5-trimethylpyrimidin-2-amine (1) with the sodium salt of 2,6-difluorophenylacetonitrile, followed by methylation and strong acidic hydrolysis. The prodrugs of MC-1220 were synthesized by reaction of chlorophosphoramidate derivatives (7a-e) or α-acetobromoglucose with the sodium salt of MC-1220. The stability and anti-HIV-1 activity of phosphoramidate prodrugs turned out to be comparable to those of the parent drug MC-1220.
- Published
- 2016
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25. Synthesis, cytotoxicity and antiviral evaluation of new series of imidazo[4,5-g]quinoline and pyrido[2,3-g]quinoxalinone derivatives.
- Author
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Briguglio I, Loddo R, Laurini E, Fermeglia M, Piras S, Corona P, Giunchedi P, Gavini E, Sanna G, Giliberti G, Ibba C, Farci P, La Colla P, Pricl S, and Carta A
- Subjects
- Antiviral Agents chemistry, Dose-Response Relationship, Drug, Humans, Imidazoles chemical synthesis, Imidazoles chemistry, Microbial Sensitivity Tests, Molecular Structure, Pyridines chemical synthesis, Pyridines chemistry, Quinolines chemical synthesis, Quinolines chemistry, Quinoxalines chemical synthesis, Quinoxalines chemistry, Structure-Activity Relationship, Antiviral Agents chemical synthesis, Antiviral Agents pharmacology, DNA Viruses drug effects, Imidazoles pharmacology, Pyridines pharmacology, Quinolines pharmacology, Quinoxalines pharmacology, RNA Viruses drug effects
- Abstract
Linear aromatic N-tricyclic compounds with promising antiviral activity and minimal cytotoxicity were prepared and analyzed in the last years. Specifically, the pyrido[2,3-g]quinoxalinone nucleus was found endowed with high potency against several pathogenic RNA viruses as etiological agents of important veterinary and human pathologies. Following our research program on new antiviral agents we have designed, synthesized and assayed new series of imidazo[4,5-g]quinoline and pyrido[2,3-g]quinoxalinone derivatives. Lead compounds 1-4 were further modified to enhance their antiviral activity and reduce their cytotoxicity. Thus, different substituents were introduced on N atom at position 1 or the O atom at position 2 of the leads; contextually, several groups were inserted on the nitrogen atom at position 7 of diaminoquinoline intermediates. Title compounds were tested in cell-based assays for cytotoxicity and antiviral activity against RNA virus families containing single-stranded (either positive-sense (ssRNA+) or negative-sense (ssRNA-)), and double-stranded genomes (dsRNA), and against two representatives of DNA virus families. Some derivatives emerged as potential leads for further development as antiviral agents against some viruses of public health significance, such as RSV, Reo, BVDV and HCV. Particularly, compounds 4, 11b, 11c, 13c, 15a, 18 and 21 resulted active against BVDV at concentrations ranging from 1.3 to 5 μM. Compound 21 was also evaluated for its activity on the BVDV RdRp. Compound 4 was also tested as potential anti-HCV compound in a subgenomic replication assay. Molecular simulation results provided a molecular rationale for the anti-BVDV activity of these compounds., (Copyright © 2015 Elsevier Masson SAS. All rights reserved.)
- Published
- 2015
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26. Antiviral activity of benzotriazole derivatives. 5-[4-(Benzotriazol-2-yl)phenoxy]-2,2-dimethylpentanoic acids potently and selectively inhibit Coxsackie Virus B5.
- Author
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Loddo R, Novelli F, Sparatore A, Tasso B, Tonelli M, Boido V, Sparatore F, Collu G, Delogu I, Giliberti G, and La Colla P
- Subjects
- Animals, Antiviral Agents chemical synthesis, Antiviral Agents toxicity, Cell Line, Cell Survival drug effects, Cricetinae, DNA Viruses drug effects, DNA Viruses physiology, Dogs, Enterovirus B, Human drug effects, Humans, RNA Viruses drug effects, RNA Viruses physiology, Structure-Activity Relationship, Triazoles chemical synthesis, Triazoles toxicity, Virus Replication drug effects, Antiviral Agents chemistry, Enterovirus B, Human physiology, Triazoles chemistry
- Abstract
A library of 64 benzotriazole derivatives (17 of which were [4-(benzotriazol-2-yl)phenoxy]alkanoic acids) were screened for antiviral activity against a panel of twelve DNA and RNA viruses. Twenty-six compounds (12 of which were [4-(benzotriazol-2-yl)phenoxy]alkanoic acids) displayed activity against one or more viruses. CVB-5, RSV, BVDV, Sb-1 and YFV were, in decreasing order, the more frequently and effectively affected viruses; DENV-2, WNV, HIV-1 and Reo-1 were only occasionally and modestly affected, while the remaining viruses were not affected by any of the tested compounds. Worth of note were compounds 33 and 35; the former for the activity against Sb-1 (EC50=7 μM) and the latter for the large spectrum of activity including six viruses with a mean EC50=12 μM. Even more interesting were the alkanoic acids 45-48 and 50-57 for their activity against RSV and/or CVB-5. In particular, compound 56 displayed a potent and selective activity against CVB-5 with EC50=0.15 μM and SI=100, thus representing a valuable hit compound for the development of antiviral agents for the treatment of human pathologies related to this virus., (Copyright © 2015 Elsevier Ltd. All rights reserved.)
- Published
- 2015
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27. Synthesis and biological evaluation of (acyl)hydrazones and thiosemicarbazones obtained via in situ condensation of iminium salts with nitrogen-containing nucleophiles.
- Author
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Caneva C, Alfei S, De Maria M, Ibba C, Delogu I, Spallarossa A, and Loddo R
- Subjects
- Antiviral Agents chemical synthesis, Antiviral Agents pharmacology, Cell Proliferation drug effects, Cell Survival drug effects, Cytotoxins chemical synthesis, Cytotoxins pharmacology, Hydrazones pharmacology, Molecular Structure, Nitrogen chemistry, Salts, Thiosemicarbazones pharmacology, Hydrazones chemical synthesis, Thiosemicarbazones chemical synthesis
- Abstract
An unprecedented, highly convergent, high-yielding, one-pot synthesis of (acyl)hydrazones and thiosemicarbazones was carried out by the in situ condensation of isolable iminium chlorides of imidazolidin-2-(thio)one, tetrahydropyrimidin-2-thione and indole derivatives with nitrogen nucleophiles in the presence of a base. The developed reaction procedure is largely advantageous. It is highly parallelizable, no intermediates need to be isolated and minimal sample handling is required during the purification steps. Some relevant reaction parameters including reaction temperature and p[Formula: see text] of the base are discussed. NMR analysis was carried out to assess the stereochemistry of the obtained compounds. The stereochemical outcome of the reaction was found to be affected by the nature of the nitrogen-containing nucleophile being the majority of the derivatives isolated as single geometric isomers. The cytotoxicity and antiviral activities of the prepared compounds have been preliminary assessed. In cell-based screenings some of the derivatives proved to be cytotoxic at low micromolar concentrations and interesting anti-Reo-1 properties have been detected.
- Published
- 2015
- Full Text
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28. Unconventional Knoevenagel-type indoles: Synthesis and cell-based studies for the identification of pro-apoptotic agents.
- Author
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Spallarossa A, Caneva C, Caviglia M, Alfei S, Butini S, Campiani G, Gemma S, Brindisi M, Zisterer DM, Bright SA, Williams CD, Crespan E, Maga G, Sanna G, Delogu I, Collu G, and Loddo R
- Subjects
- Antineoplastic Agents chemical synthesis, Antineoplastic Agents chemistry, Antineoplastic Agents pharmacology, Cell Proliferation drug effects, Drug Screening Assays, Antitumor, HL-60 Cells, Humans, Indoles chemistry, K562 Cells, MCF-7 Cells, Molecular Structure, Structure-Activity Relationship, Apoptosis drug effects, Indoles chemical synthesis, Indoles pharmacology
- Abstract
A new series of indole-based analogues were recently identified as potential anticancer agents. The Knoevenagel-type indoles herein presented were prepared via a one-pot condensation of iminium salts with active methylene reagents and were isolated as single geometric isomers. Biological evaluation in different cell-based assays revealed an antiproliferative activity for some analogues already in the nanomolar range against leukaemia, breast and renal cancer cell lines. To explain these effects, the most promising analogues of the series were engaged in further cell-based studies. Compounds 5e, l, p and 6a, b highlighted a pro-apoptotic potential being able to induce apoptosis in HL60, K562 and MCF-7 cell lines in a dose and time-dependent manner. The ability of these compounds to arrest cell cycle at the G2/M phase inspired the immunofluorescence studies which allowed us to identify tubulin as a potential target for compounds 5l and 6b., (Copyright © 2015 Elsevier Masson SAS. All rights reserved.)
- Published
- 2015
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29. N-((1,3-Diphenyl-1H-pyrazol-4-yl)methyl)anilines: A novel class of anti-RSV agents.
- Author
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Fioravanti R, Desideri N, Biava M, Droghini P, Atzori EM, Ibba C, Collu G, Sanna G, Delogu I, and Loddo R
- Subjects
- Antiviral Agents chemical synthesis, Antiviral Agents chemistry, Cell Line, Humans, Virus Replication drug effects, Aniline Compounds chemistry, Antiviral Agents pharmacology, Pyrazoles chemistry, Respiratory Syncytial Viruses drug effects
- Abstract
A series of N-((1,3-diphenyl-1H-pyrazol-4-yl)methyl)anilines were synthesized and evaluated in vitro for cytotoxicity and antiviral activity against a large panel of viruses. Most of the tested compounds interfered with RSV replication in the micromolar concentrations (EC50s ranging from 5 μM to 28 μM). SAR studies suggested that the presence of a trifluoromethyl group in R(1) abolished the anti-RSV activity and enhanced the cytotoxicity while the best results in term of both anti-RSV activity and selectivity were obtained by the introduction in R(1) of a chlorine or a bromine atom., (Copyright © 2015 Elsevier Ltd. All rights reserved.)
- Published
- 2015
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30. Antitubercular activity of quinolizidinyl/pyrrolizidinylalkyliminophenazines.
- Author
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Tonelli M, Novelli F, Tasso B, Sparatore A, Boido V, Sparatore F, Cannas S, Molicotti P, Zanetti S, Parapini S, and Loddo R
- Subjects
- Animals, Antitubercular Agents pharmacology, Antitubercular Agents toxicity, Cell Line, Cell Survival drug effects, Chlorocebus aethiops, Humans, Microbial Sensitivity Tests, Mycobacterium avium drug effects, Mycobacterium avium isolation & purification, Mycobacterium tuberculosis drug effects, Mycobacterium tuberculosis isolation & purification, Phenazines pharmacology, Phenazines toxicity, Pyrrolidines chemistry, Quinolizidines chemistry, Structure-Activity Relationship, Tuberculosis microbiology, Vero Cells, Antitubercular Agents chemistry, Phenazines chemistry
- Abstract
Novel riminophenazine derivatives, characterized by the presence of the basic and cumbersome quinolizidinylalkyl and pyrrolizidinylethyl moieties, have been synthesized and tested (Rema test) against Mycobacterium tuberculosis H37Rv and H37Ra, and six clinical isolates of Mycobacterium avium and Mycobacterium tuberculosis. Most compounds exhibited potent activity against the tested strains, resulting more active than clofazimine, isoniazid and ethambutol. The best compounds (4, 5, 12 and 13) exhibited a MIC in the range 0.82-0.86μM against all strains of Mycobacterium tuberculosis and, with the exception of 4 a MIC around 3.3μM versus M. avium. The corresponding values for clofazimine (CFM) were 1.06 and 4.23μM, respectively. Cytotoxicity was evaluated against three cell lines and compound 4 displayed a selectivity index (SI) versus the human cell line MT-4 comparable with that of CFM (SI=5.23 vs 6.4). Toxicity against mammalian Vero 76 cell line was quite lower with SI=79., (Copyright © 2014 Elsevier Ltd. All rights reserved.)
- Published
- 2014
- Full Text
- View/download PDF
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