35 results on '"Smith, Alec S. T."'
Search Results
2. Spaceflight-induced contractile and mitochondrial dysfunction in an automated heart-on-a-chip platform.
- Author
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Mair, Devin B., Tsui, Jonathan H., Ty Higashi, Koenig, Paul, Zhipeng Dong, Chen, Jeffrey F., Meir, Jessica U., Smith, Alec S. T., Lee, Peter H. U., Eun Hyun Ahn, Countryman, Stefanie, Sniadecki, Nathan J., and Deok-Ho Kim
- Subjects
HUMAN space flight ,RNA sequencing ,OXIDATIVE stress ,SPACE stations ,SPACE flight - Abstract
With current plans for manned missions to Mars and beyond, the need to better understand, prevent, and counteract the harmful effects of long-duration spaceflight on the body is becoming increasingly important. In this study, an automated heart-on-a-chip platform was flown to the International Space Station on a 1-mo mission during which contractile cardiac function was monitored in real-time. Upon return to Earth, engineered human heart tissues (EHTs) were further analyzed with ultrastructural imaging and RNA sequencing to investigate the impact of prolonged microgravity on cardiomyocyte function and health. Spaceflight EHTs exhibited significantly reduced twitch forces, increased incidences of arrhythmias, and increased signs of sarcomere disruption and mitochondrial damage. Transcriptomic analyses showed an up-regulation of genes and pathways associated with metabolic disorders, heart failure, oxidative stress, and inflammation, while genes related to contractility and calcium signaling showed significant down-regulation. Finally, in silico modeling revealed a potential link between oxidative stress and mitochondrial dysfunction that corresponded with RNA sequencing results. This represents an in vitro model to faithfully reproduce the adverse effects of spaceflight on three-dimensional (3D)-engineered heart tissue. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
3. Human Motor Neurons Elicit Pathological Hallmarks of ALS and Reveal Potential Biomarkers of the Disease in Response to Prolonged IFNγ Exposure.
- Author
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Changho Chun, Jung Hyun Lee, Bothwell, Mark, Nghiem, Paul, Smith, Alec S. T., and Mack, David L.
- Subjects
MOTOR neuron diseases ,AMYOTROPHIC lateral sclerosis ,MOTOR neurons ,IMMUNE checkpoint proteins ,PROGRAMMED death-ligand 1 ,BIOMARKERS ,DNA-binding proteins - Abstract
Amyotrophic lateral sclerosis (ALS) is a debilitating neurodegenerative disorder marked by progressive motor neuron degeneration and muscle denervation. A recent transcriptomic study integrating a wide range of human ALS samples revealed that the upregulation of p53, a downstream target of inflammatory stress, is commonly detected in familial and sporadic ALS cases by a mechanism linked to a transactive response DNA-binding protein 43 (TDP-43) dysfunction. In this study, we show that prolonged interferongamma (IFNγ) treatment of human induced pluripotent stem cell-derived spinal motor neurons results in a severe cytoplasmic aggregation of TDP-43. TDP-43 dysfunction resulting from either IFNγ exposure or an ALS-associated TDP-43 mutation was associated with the activation of the p53 pathway. This was accompanied by the hyperactivation of neuronal firing, followed by the complete loss of their electrophysiological function. Through a comparative single-cell transcriptome analysis, we have identified significant alterations in ALS-associated genes in motor neurons exposed to IFNγ, implicating their direct involvement in ALS pathology. Interestingly, IFNγ was found to induce significant levels of programmed death-ligand 1 (PD-L1) expression in motor neurons without affecting the levels of any other immune checkpoint proteins. This finding suggests a potential role of excessive PD-L1 expression in ALS development, given that PD-L1 was recently reported to impair neuronal firing ability in mice. Our findings suggest that exposing motor neurons to IFNγ could directly derive ALS pathogenesis, even without the presence of the inherent genetic mutation or functional glia component. Furthermore, this study provides a comprehensive list of potential candidate genes for future immunotherapeutic targets with which to treat sporadic forms of ALS, which account for 90% of all reported cases. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
4. Bioengineered Human Heart and Skeletal Muscles on Chips: Methods and Applications
- Author
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Nam, Ki-Hwan, Perla, Mikael, Smith, Alec S. T., Kim, Deok-Ho, Guglielmelli, Eugenio, Series editor, Jo, Hanjoong, editor, Jun, Ho-Wook, editor, Shin, Jennifer, editor, and Lee, SangHoon, editor
- Published
- 2016
- Full Text
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5. Editorial: Modeling neuromuscular diseases to determine molecular drivers of pathology and for drug discovery
- Author
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Smith, Alec S. T., primary, McCain, Megan L., additional, Bothwell, Mark, additional, and Mack, David L., additional
- Published
- 2022
- Full Text
- View/download PDF
6. Nanopatterned Human iPSC-Based Model of a Dystrophin-Null Cardiomyopathic Phenotype
- Author
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Macadangdang, Jesse, Guan, Xuan, Smith, Alec S. T., Lucero, Rachel, Czerniecki, Stefan, Childers, Martin K., Mack, David L., and Kim, Deok-Ho
- Published
- 2015
- Full Text
- View/download PDF
7. Bioengineered Human Heart and Skeletal Muscles on Chips: Methods and Applications
- Author
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Nam, Ki-Hwan, primary, Perla, Mikael, additional, Smith, Alec S. T., additional, and Kim, Deok-Ho, additional
- Published
- 2015
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8. Human Induced Pluripotent Stem Cell-Derived TDP-43 Mutant Neurons Exhibit Consistent Functional Phenotypes Across Multiple Gene Edited Lines Despite Transcriptomic and Splicing Discrepancies
- Author
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Smith, Alec S. T., primary, Chun, Changho, additional, Hesson, Jennifer, additional, Mathieu, Julie, additional, Valdmanis, Paul N., additional, Mack, David L., additional, Choi, Byung-Ok, additional, Kim, Deok-Ho, additional, and Bothwell, Mark, additional
- Published
- 2021
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9. Creating stem cell‐derived neuromuscular junctions in vitro
- Author
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Luttrell, Shawn M., primary, Smith, Alec S. T., additional, and Mack, David L., additional
- Published
- 2021
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10. Nanopatterned Nafion Microelectrode Arrays for In Vitro Cardiac Electrophysiology
- Author
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Choi, Jong Seob, primary, Smith, Alec S. T., additional, Williams, Nisa P., additional, Matsubara, Tatsuya, additional, Choi, Minji, additional, Kim, Joon‐Wan, additional, Kim, Hyung Jin, additional, Choi, Seungkeun, additional, and Kim, Deok‐Ho, additional
- Published
- 2020
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11. NanoMEA: A Tool for High-Throughput, Electrophysiological Phenotyping of Patterned Excitable Cells
- Author
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Smith, Alec S. T., primary, Choi, Eunpyo, additional, Gray, Kevin, additional, Macadangdang, Jesse, additional, Ahn, Eun Hyun, additional, Clark, Elisa C., additional, Laflamme, Michael A., additional, Wu, Joseph C., additional, Murry, Charles E., additional, Tung, Leslie, additional, and Kim, Deok-Ho, additional
- Published
- 2019
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12. High-throughput, real-time monitoring of engineered skeletal muscle function using magnetic sensing.
- Author
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Smith, Alec S. T., Luttrell, Shawn M., Dupont, Jean-Baptiste, Gray, Kevin, Lih, Daniel, Fleming, Jacob W., Cunningham, Nathan J., Jepson, Sofia, Hesson, Jennifer, Mathieu, Julie, Maves, Lisa, Berry, Bonnie J., Fisher, Elliot C., Sniadecki, Nathan J., Geisse, Nicholas A., and Mack, David L.
- Subjects
- *
SKELETAL muscle , *INDUCED pluripotent stem cells , *HIGH throughput screening (Drug development) , *MUSCULAR sense - Abstract
Engineered muscle tissues represent powerful tools for examining tissue level contractile properties of skeletal muscle. However, limitations in the throughput associated with standard analysis methods limit their utility for longitudinal study, high throughput drug screens, and disease modeling. Here we present a method for integrating 3D engineered skeletal muscles with a magnetic sensing system to facilitate non-invasive, longitudinal analysis of developing contraction kinetics. Using this platform, we show that engineered skeletal muscle tissues derived from both induced pluripotent stem cell and primary sources undergo improvements in contractile output over time in culture. We demonstrate how magnetic sensing of contractility can be employed for simultaneous assessment of multiple tissues subjected to different doses of known skeletal muscle inotropes as well as the stratification of healthy versus diseased functional profiles in normal and dystrophic muscle cells. Based on these data, this combined culture system and magnet-based contractility platform greatly broadens the potential for 3D engineered skeletal muscle tissues to impact the translation of novel therapies from the lab to the clinic. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
13. Chromatin compartment dynamics in a haploinsufficient model of cardiac laminopathy
- Author
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Bertero, Alessandro, primary, Fields, Paul A., additional, Smith, Alec S. T., additional, Leonard, Andrea, additional, Beussman, Kevin, additional, Sniadecki, Nathan J., additional, Kim, Deok-Ho, additional, Tse, Hung-Fat, additional, Pabon, Lil, additional, Shendure, Jay, additional, Noble, William S., additional, and Murry, Charles E., additional
- Published
- 2019
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14. Temporal Characterization of Neuronal Migration Behavior on Chemically Patterned Neuronal Circuits in a Defined in Vitro Environment
- Author
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Natarajan, Anupama, primary, Smith, Alec S. T., additional, Berry, Bonnie, additional, Lambert, Stephen, additional, Molnar, Peter, additional, and Hickman, James J., additional
- Published
- 2018
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15. Physiological Aβ Concentrations Produce a More Biomimetic Representation of the Alzheimer’s Disease Phenotype in iPSC Derived Human Neurons
- Author
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Berry, Bonnie J., primary, Smith, Alec S. T., additional, Long, Christopher J., additional, Martin, Candace C., additional, and Hickman, James J., additional
- Published
- 2018
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16. Regulation of skeletal myotube formation and alignment by nanotopographically controlled cell-secreted extracellular matrix
- Author
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Jiao, Alex, primary, Moerk, Charles T., additional, Penland, Nisa, additional, Perla, Mikael, additional, Kim, Jinsung, additional, Smith, Alec S. T., additional, Murry, Charles E., additional, and Kim, Deok-Ho, additional
- Published
- 2018
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17. Micro- and nano-patterned conductive graphene–PEG hybrid scaffolds for cardiac tissue engineering
- Author
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Smith, Alec S. T., primary, Yoo, Hyok, additional, Yi, Hyunjung, additional, Ahn, Eun Hyun, additional, Lee, Justin H., additional, Shao, Guozheng, additional, Nagornyak, Ekaterina, additional, Laflamme, Michael A., additional, Murry, Charles E., additional, and Kim, Deok-Ho, additional
- Published
- 2017
- Full Text
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18. NanoMEA: A Tool for High-Throughput, Electrophysiological Phenotyping of Patterned Excitable Cells
- Author
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Smith, Alec S. T., Choi, Eunpyo, Gray, Kevin, Macadangdang, Jesse, Ahn, Eun Hyun, Clark, Elisa C., Laflamme, Michael A., Wu, Joseph C., Murry, Charles E., Tung, Leslie, and Kim, Deok-Ho
- Abstract
Matrix nanotopographical cues are known to regulate the structure and function of somatic cells derived from human pluripotent stem cell (hPSC) sources. High-throughput electrophysiological analysis of excitable cells derived from hPSCs is possible via multielectrode arrays (MEAs) but conventional MEA platforms use flat substrates and do not reproduce physiologically relevant tissue-specific architecture. To address this issue, we developed a high-throughput nanotopographically patterned multielectrode array (nanoMEA) by integrating conductive, ion-permeable, nanotopographic patterns with 48-well MEA plates, and investigated the effect of substrate-mediated cytoskeletal organization on hPSC-derived cardiomyocyte and neuronal function at scale. Using our nanoMEA platform, we found patterned hPSC-derived cardiac monolayers exhibit both enhanced structural organization and greater sensitivity to treatment with calcium blocking or conduction inhibiting compounds when subjected to high-throughput dose–response studies. Similarly, hPSC-derived neurons grown on nanoMEA substrates exhibit faster migration and neurite outgrowth speeds, greater colocalization of pre- and postsynaptic markers, and enhanced cell–cell communication only revealed through examination of data sets derived from multiple technical replicates. The presented data highlight the nanoMEA as a new tool to facilitate high-throughput, electrophysiological analysis of ordered cardiac and neuronal monolayers, which can have important implications for preclinical analysis of excitable cell function.
- Published
- 2020
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19. Biomimetic 3D Tissue Models for Advanced High-Throughput Drug Screening.
- Author
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Nam, Ki-Hwan, Smith, Alec S. T., Lone, Saifullah, Kwon, Sunghoon, and Kim, Deok-Ho
- Subjects
DRUG design ,CLINICAL drug trials ,HUMAN anatomical models ,NANOTECHNOLOGY ,BIOCHIPS ,HIGH throughput screening (Drug development) - Abstract
Most current drug screening assays used to identify new drug candidates are 2D cell-based systems, even though such in vitro assays do not adequately re-create the in vivo complexity of 3D tissues. Inadequate representation of the human tissue environment during a preclinical test can result in inaccurate predictions of compound effects on overall tissue functionality. Screening for compound efficacy by focusing on a single pathway or protein target, coupled with difficulties in maintaining long-term 2D monolayers, can serve to exacerbate these issues when using such simplistic model systems for physiological drug screening applications. Numerous studies have shown that cell responses to drugs in 3D culture are improved from those in 2D, with respect to modeling in vivo tissue functionality, which highlights the advantages of using 3D-based models for preclinical drug screens. In this review, we discuss the development of microengineered 3D tissue models that accurately mimic the physiological properties of native tissue samples and highlight the advantages of using such 3D microtissue models over conventional cell-based assays for future drug screening applications. We also discuss biomimetic 3D environments, based on engineered tissues as potential preclinical models for the development of more predictive drug screening assays for specific disease models. [ABSTRACT FROM PUBLISHER]
- Published
- 2015
- Full Text
- View/download PDF
20. Chromatin compartment dynamics in a haploinsufficient model of cardiac laminopathy.
- Author
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Bertero, Alessandro, Fields, Paul A., Smith, Alec S. T., Leonard, Andrea, Beussman, Kevin, Sniadecki, Nathan J., Deok-Ho Kim, Hung-Fat Tse, Pabon, Lil, Shendure, Jay, Noble, William S., and Murry, Charles E.
- Subjects
- *
PLURIPOTENT stem cells , *CHROMATIN , *CHROMOSOME analysis , *CALCIUM channels , *DILATED cardiomyopathy - Abstract
Mutations in A-type nuclear lamins cause dilated cardiomyopathy, which is postulated to result from dysregulated gene expression due to changes in chromatin organization into active and inactive compartments. To test this, we performed genome-wide chromosome conformation analyses in human induced pluripotent stem cell–derived cardiomyocytes (hiPSCCMs) with a haploinsufficient mutation for lamin A/C. Compared with gene-corrected cells, mutant hiPSC-CMs have marked electrophysiological and contractile alterations, with modest gene expression changes. While large-scale changes in chromosomal topology are evident, differences in chromatin compartmentalization are limited to a few hotspots that escape segregation to the nuclear lamina and inactivation during cardiogenesis. These regions exhibit up-regulation of multiple noncardiac genes including CACNA1A, encoding for neuronal P/Q-type calcium channels. Pharmacological inhibition of the resulting current partially mitigates the electrical alterations. However, chromatin compartment changes do not explain most gene expression alterations in mutant hiPSC-CMs. Thus, global errors in chromosomal compartmentation are not the primary pathogenic mechanism in heart failure due to lamin A/C haploinsufficiency. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
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21. Human Motor Neurons Elicit Pathological Hallmarks of ALS and Reveal Potential Biomarkers of the Disease in Response to Prolonged IFNγ Exposure.
- Author
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Chun C, Lee JH, Bothwell M, Nghiem P, Smith AST, and Mack DL
- Subjects
- Animals, Humans, Mice, B7-H1 Antigen metabolism, Biomarkers, DNA-Binding Proteins genetics, Interferon-gamma metabolism, Interferon-gamma pharmacology, Motor Neurons drug effects, Motor Neurons metabolism, Motor Neurons pathology, Tumor Suppressor Protein p53 metabolism, Amyotrophic Lateral Sclerosis genetics, Amyotrophic Lateral Sclerosis metabolism, Amyotrophic Lateral Sclerosis pathology, Induced Pluripotent Stem Cells metabolism
- Abstract
Amyotrophic lateral sclerosis (ALS) is a debilitating neurodegenerative disorder marked by progressive motor neuron degeneration and muscle denervation. A recent transcriptomic study integrating a wide range of human ALS samples revealed that the upregulation of p53, a downstream target of inflammatory stress, is commonly detected in familial and sporadic ALS cases by a mechanism linked to a transactive response DNA-binding protein 43 (TDP-43) dysfunction. In this study, we show that prolonged interferon-gamma (IFNγ) treatment of human induced pluripotent stem cell-derived spinal motor neurons results in a severe cytoplasmic aggregation of TDP-43. TDP-43 dysfunction resulting from either IFNγ exposure or an ALS-associated TDP-43 mutation was associated with the activation of the p53 pathway. This was accompanied by the hyperactivation of neuronal firing, followed by the complete loss of their electrophysiological function. Through a comparative single-cell transcriptome analysis, we have identified significant alterations in ALS-associated genes in motor neurons exposed to IFNγ, implicating their direct involvement in ALS pathology. Interestingly, IFNγ was found to induce significant levels of programmed death-ligand 1 (PD-L1) expression in motor neurons without affecting the levels of any other immune checkpoint proteins. This finding suggests a potential role of excessive PD-L1 expression in ALS development, given that PD-L1 was recently reported to impair neuronal firing ability in mice. Our findings suggest that exposing motor neurons to IFNγ could directly derive ALS pathogenesis, even without the presence of the inherent genetic mutation or functional glia component. Furthermore, this study provides a comprehensive list of potential candidate genes for future immunotherapeutic targets with which to treat sporadic forms of ALS, which account for 90% of all reported cases., Competing Interests: The authors declare no competing financial interests., (Copyright © 2024 the authors.)
- Published
- 2024
- Full Text
- View/download PDF
22. HDAC6 Inhibition Corrects Electrophysiological and Axonal Transport Deficits in a Human Stem Cell-Based Model of Charcot-Marie-Tooth Disease (Type 2D).
- Author
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Smith AST, Kim JH, Chun C, Gharai A, Moon HW, Kim EY, Nam SH, Ha N, Song JY, Chung KW, Doo HM, Hesson J, Mathieu J, Bothwell M, Choi BO, and Kim DH
- Subjects
- Axonal Transport, Histone Deacetylase 6 genetics, Histone Deacetylase Inhibitors pharmacology, Humans, Tubulin genetics, Charcot-Marie-Tooth Disease drug therapy, Glycine-tRNA Ligase genetics, Induced Pluripotent Stem Cells metabolism
- Abstract
Charcot-Marie-Tooth disease type 2D (CMT2D), is a hereditary peripheral neuropathy caused by mutations in the gene encoding glycyl-tRNA synthetase (GARS1). Here, human induced pluripotent stem cell (hiPSC)-based models of CMT2D bearing mutations in GARS1 and their use for the identification of predictive biomarkers amenable to therapeutic efficacy screening is described. Cultures containing spinal cord motor neurons generated from this line exhibit network activity marked by significant deficiencies in spontaneous action potential firing and burst fire behavior. This result matches clinical data collected from a patient bearing a GARS1
P724H mutation and is coupled with significant decreases in acetylated α-tubulin levels and mitochondrial movement within axons. Treatment with histone deacetylase 6 inhibitors, tubastatin A and CKD504, improves mitochondrial movement and α-tubulin acetylation in these cells. Furthermore, CKD504 treatment enhances population-level electrophysiological activity, highlighting its potential as an effective treatment for CMT2D., (© 2021 Wiley-VCH GmbH.)- Published
- 2022
- Full Text
- View/download PDF
23. Conformational sampling of CMT-2D associated GlyRS mutations.
- Author
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Childers MC, Regnier M, Bothwell M, and Smith AST
- Abstract
During protein synthesis, aminoacyl-tRNA synthetases covalently link amino acids with their cognate tRNAs. Amino acid mutations in glycyl-tRNA synthetase can disrupt protein synthesis and lead to a neurological disorder known as Charcot-Marie-Tooth disease type 2D (CMT-2D). Several studies employing diverse techniques have identified potential disease mechanisms at the molecular level. The majority of CMT-2D mutations in glycyl-tRNA are found within its dimer interface. However, no atomic structures bearing these mutations have been solved. Consequently, the specific disease-causing structural changes that occur in glycyl-tRNA synthetase have not been definitively established. Here we use molecular dynamics simulations to probe conformational changes in glycyl-tRNA synthetase caused by one mutation within the dimer interface: G240R. Our results show that the mutation alters the number of native interactions at the dimer interface and also leads to altered dynamics of two regions of glycyl-tRNA synthetase associated with tRNA binding. Additionally, we use our simulations to make predictions about the effects of other clinically reported CMT-2D mutations. Our results identify a region of the glycyl-tRNA synthetase structure that may be disrupted in a large number of CMT-2D mutations. Structural changes in this region may be a common molecular mechanism in glycyl-tRNA synthetase CMT-2D pathologies. Statement of significance: In this study, we use molecular dynamics simulations to elucidate structural conformations accessible to glycyl-tRNA synthetase (GlyRS), an enzyme that ligates cytosolic glycine with tRNA-Gly. This protein contains multiple flexible regions with dynamics that elude in vitro structural characterization. Our computational approach provides unparalleled atomistic details of structural changes in GlyRS that contribute to its role in protein synthesis. A number of mutations in GlyRS are associated with a peripheral nerve disorder, Charcot-Marie-Tooth disease type 2D (CMT-2D). Mutation-induced structural and dynamic changes in GlyRS have similarity that elude in vitro structural characterization. Our simulations provide insights into disease mechanisms for one such mutation: G240R. Additionally, we leverage our computational data to identify regions of GlyRS critical to its function and to predict the effects of other disease-associated mutations. These results open up new directions for research into the molecular characterization of GlyRS and into hypothesis-driven studies of CMT-2D disease mechanisms., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.
- Published
- 2022
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24. Tunable electroconductive decellularized extracellular matrix hydrogels for engineering human cardiac microphysiological systems.
- Author
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Tsui JH, Leonard A, Camp ND, Long JT, Nawas ZY, Chavanachat R, Smith AST, Choi JS, Dong Z, Ahn EH, Wolf-Yadlin A, Murry CE, Sniadecki NJ, and Kim DH
- Subjects
- Animals, Extracellular Matrix, Humans, Reproducibility of Results, Swine, Tissue Engineering, Tissue Scaffolds, Hydrogels, Induced Pluripotent Stem Cells
- Abstract
Cardiomyocytes differentiated from human induced pluripotent stem cells (hiPSCs) offer tremendous potential when used to engineer human tissues for drug screening and disease modeling; however, phenotypic immaturity reduces assay reliability when translating in vitro results to clinical studies. To address this, we have developed hybrid hydrogels comprised of decellularized porcine myocardial extracellular matrix (dECM) and reduced graphene oxide (rGO) to provide a more instructive microenvironment for proper cell and tissue development. A tissue-specific protein profile was preserved post-decellularization, and through the modulation of rGO content and degree of reduction, the mechanical and electrical properties of the hydrogels could be tuned. Engineered heart tissues (EHTs) generated using dECM-rGO hydrogel scaffolds and hiPSC-derived cardiomyocytes exhibited significantly increased twitch forces and had increased expression of genes that regulate contractile function. Improvements in various aspects of electrophysiological function, such as calcium-handling, action potential duration, and conduction velocity, were also induced by the hybrid biomaterial. dECM-rGO hydrogels could also be used as a bioink to print cardiac tissues in a high-throughput manner, and these tissues were utilized to assess the proarrhythmic potential of cisapride. Action potential prolongation and beat interval irregularities was observed in dECM-rGO tissues at clinical doses of cisapride, indicating that the enhanced electrophysiological function of these tissues corresponded well with a capability to produce physiologically relevant drug responses., (Copyright © 2021 Elsevier Ltd. All rights reserved.)
- Published
- 2021
- Full Text
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25. Astrocyte-derived extracellular vesicles enhance the survival and electrophysiological function of human cortical neurons in vitro.
- Author
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Chun C, Smith AST, Kim H, Kamenz DS, Lee JH, Lee JB, Mack DL, Bothwell M, Clelland CD, and Kim DH
- Subjects
- Astrocytes, Cells, Cultured, Humans, Neurons, Proteomics, Extracellular Vesicles, Induced Pluripotent Stem Cells, Peripheral Nervous System Diseases
- Abstract
Neurons derived from human induced pluripotent stem cells (hiPSCs) are powerful tools for modeling neural pathophysiology and preclinical efficacy/toxicity screening of novel therapeutic compounds. However, human neurons cultured in vitro typically do not fully recapitulate the physiology of the human nervous system, especially in terms of exhibiting morphological maturation, longevity, and electrochemical signaling ability comparable to that of adult human neurons. In this study, we investigated the potential for astrocyte-derived extracellular vesicles (EVs) to modulate survival and electrophysiological function of human neurons in vitro. Specifically, we demonstrate that EVs obtained from human astrocytes promote enhanced single cell electrophysiological function and anti-apoptotic behavior in a homogeneous population of human iPSC-derived cortical neurons. Furthermore, EV-proteomic analysis was performed to identify cargo proteins with the potential to promote the physiological enhancement observed. EV cargos were found to include neuroprotective proteins such as heat shock proteins, alpha-synuclein, and lipoprotein receptor-related protein 1 (LRP1), as well as apolipoprotein E (APOE), which negatively regulates neuronal apoptosis, and a peroxidasin homolog that supports neuronal oxidative stress management. Proteins that positively regulate neuronal excitability and synaptic development were also detected, such as potassium channel tetramerization domain containing 12 (KCTD12), glucose-6- phosphate dehydrogenase (G6PD), kinesin family member 5B (KIF5B), spectrin-alpha non-erythrocytic1 (SPTAN1). The remarkable improvements in electrophysiological function and evident inhibition of apoptotic signaling in cultured neurons exposed to these cargos may hold significance for improving preclinical in vitro screening modalities. In addition, our collected data highlight the potential for EV-based therapeutics as a potential class of future clinical treatment for tackling inveterate central and peripheral neuropathies., (Copyright © 2021 Elsevier Ltd. All rights reserved.)
- Published
- 2021
- Full Text
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26. Engineering anisotropic 3D tubular tissues with flexible thermoresponsive nanofabricated substrates.
- Author
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Williams NP, Rhodehamel M, Yan C, Smith AST, Jiao A, Murry CE, Scatena M, and Kim DH
- Subjects
- Anisotropy, Gelatin, Humans, Muscle Fibers, Skeletal, Tissue Scaffolds, Hydrogels, Tissue Engineering
- Abstract
Tissue engineering aims to capture the structural and functional aspects of diverse tissue types in vitro. However, most approaches are limited in their ability to produce complex 3D geometries that are essential for tissue function. Tissues, such as the vasculature or chambers of the heart, often possess curved surfaces and hollow lumens that are difficult to recapitulate given their anisotropic architecture. Cell-sheet engineering techniques using thermoresponsive substrates provide a means to stack individual layers of cells with spatial control to create dense, scaffold-free tissues. In this study, we developed a novel method to fabricate complex 3D structures by layering multiple sheets of aligned cells onto flexible scaffolds and casting them into hollow tubular geometries using custom molds and gelatin hydrogels. To enable the fabrication of 3D tissues, we adapted our previously developed thermoresponsive nanopatterned cell-sheet technology by applying it to flexible substrates that could be folded as a form of tissue origami. We demonstrated the versatile nature of this platform by casting aligned sheets of smooth and cardiac muscle cells circumferentially around the surfaces of gelatin hydrogel tubes with hollow lumens. Additionally, we patterned skeletal muscle in the same fashion to recapitulate the 3D curvature that is observed in the muscles of the trunk. The circumferential cell patterning in each case was maintained after one week in culture and even encouraged organized skeletal myotube formation. Additionally, with the application of electrical field stimulation, skeletal myotubes began to assemble functional sarcomeres that could contract. Cardiac tubes could spontaneously contract and be paced for up to one month. Our flexible cell-sheet engineering approach provides an adaptable method to recapitulate more complex 3D geometries with tissue specific customization through the addition of different cell types, mold shapes, and hydrogels. By enabling the fabrication of scaled biomimetic models of human tissues, this approach could potentially be used to investigate tissue structure-function relationships, development, and maturation in the dish., Competing Interests: Declaration of competing interest D-H.K. is a scientific founder and equity holder of NanoSurface Biomedical Inc. A.J. is an employee of NanoSurface Biomedical. A.S.T.S. is a scientific advisor to NanoSurface Biomedical, a company that cells patterned cultureware, and has uncompensated stock in the business. C.E.M is an employee and equity holder in Sana Biotechnology., (Copyright © 2020. Published by Elsevier Ltd.)
- Published
- 2020
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- View/download PDF
27. Advances and Current Challenges Associated with the Use of Human Induced Pluripotent Stem Cells in Modeling Neurodegenerative Disease.
- Author
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Berry BJ, Smith AST, Young JE, and Mack DL
- Subjects
- Cell Culture Techniques, Cell Differentiation, Humans, Induced Pluripotent Stem Cells cytology, Neurodegenerative Diseases pathology, Neurons cytology, Neurons metabolism, Neurons pathology, Animal Use Alternatives, Epigenesis, Genetic, Induced Pluripotent Stem Cells metabolism, Neurodegenerative Diseases genetics
- Abstract
One of the most profound advances in the last decade of biomedical research has been the development of human induced pluripotent stem cell (hiPSC) models for identification of disease mechanisms and drug discovery. Human iPSC technology has the capacity to revolutionize healthcare and the realization of personalized medicine, but differentiated tissues derived from stem cells come with major criticisms compared to native tissue, including variability in genetic backgrounds, a lack of functional maturity, and differences in epigenetic profiles. It is widely believed that increasing complexity will lead to improved clinical relevance, so methods are being developed that go from a single cell type to various levels of 2-D coculturing and 3-D organoids. As this inevitable trend continues, it will be essential to thoroughly understand the strengths and weaknesses of more complex models and to develop criteria for assessing biological relevance. We believe the payoff of robust, high-throughput, clinically meaningful human stem cell models could be the elimination of often inadequate animal models. To facilitate this transition, we will look at the challenges and strategies of complex model development through the lens of neurodegeneration to encapsulate where the disease-in-a-dish field currently is and where it needs to go to improve., (© 2018 S. Karger AG, Basel.)
- Published
- 2018
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28. Human iPSC-derived cardiomyocytes and tissue engineering strategies for disease modeling and drug screening.
- Author
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Smith AS, Macadangdang J, Leung W, Laflamme MA, and Kim DH
- Subjects
- Humans, Drug Evaluation, Preclinical, Induced Pluripotent Stem Cells, Models, Biological, Myocytes, Cardiac, Tissue Engineering
- Abstract
Improved methodologies for modeling cardiac disease phenotypes and accurately screening the efficacy and toxicity of potential therapeutic compounds are actively being sought to advance drug development and improve disease modeling capabilities. To that end, much recent effort has been devoted to the development of novel engineered biomimetic cardiac tissue platforms that accurately recapitulate the structure and function of the human myocardium. Within the field of cardiac engineering, induced pluripotent stem cells (iPSCs) are an exciting tool that offer the potential to advance the current state of the art, as they are derived from somatic cells, enabling the development of personalized medical strategies and patient specific disease models. Here we review different aspects of iPSC-based cardiac engineering technologies. We highlight methods for producing iPSC-derived cardiomyocytes (iPSC-CMs) and discuss their application to compound efficacy/toxicity screening and in vitro modeling of prevalent cardiac diseases. Special attention is paid to the application of micro- and nano-engineering techniques for the development of novel iPSC-CM based platforms and their potential to advance current preclinical screening modalities., (Published by Elsevier Inc.)
- Published
- 2017
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29. Muscular dystrophy in a dish: engineered human skeletal muscle mimetics for disease modeling and drug discovery.
- Author
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Smith AST, Davis J, Lee G, Mack DL, and Kim DH
- Subjects
- Animals, Biomimetics, Drug Discovery, Humans, Models, Biological, Muscle, Skeletal physiology, Muscular Dystrophies physiopathology, Tissue Engineering
- Abstract
Engineered in vitro models using human cells, particularly patient-derived induced pluripotent stem cells (iPSCs), offer a potential solution to issues associated with the use of animals for studying disease pathology and drug efficacy. Given the prevalence of muscle diseases in human populations, an engineered tissue model of human skeletal muscle could provide a biologically accurate platform to study basic muscle physiology, disease progression, and drug efficacy and/or toxicity. Such platforms could be used as phenotypic drug screens to identify compounds capable of alleviating or reversing congenital myopathies, such as Duchene muscular dystrophy (DMD). Here, we review current skeletal muscle modeling technologies with a specific focus on efforts to generate biomimetic systems for investigating the pathophysiology of dystrophic muscle., (Copyright © 2016 Elsevier Ltd. All rights reserved.)
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- 2016
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30. Nanotopography-Induced Structural Anisotropy and Sarcomere Development in Human Cardiomyocytes Derived from Induced Pluripotent Stem Cells.
- Author
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Carson D, Hnilova M, Yang X, Nemeth CL, Tsui JH, Smith AS, Jiao A, Regnier M, Murry CE, Tamerler C, and Kim DH
- Subjects
- Anisotropy, Cell Differentiation, Humans, Induced Pluripotent Stem Cells, Nanostructures, Oligopeptides, Sarcomeres, Myocytes, Cardiac
- Abstract
Understanding the phenotypic development of human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) is a prerequisite to advancing regenerative cardiac therapy, disease modeling, and drug screening applications. Lack of consistent hiPSC-CM in vitro data can be largely attributed to the inability of conventional culture methods to mimic the structural, biochemical, and mechanical aspects of the myocardial niche accurately. Here, we present a nanogrid culture array comprised of nanogrooved topographies, with groove widths ranging from 350 to 2000 nm, to study the effect of different nanoscale structures on the structural development of hiPSC-CMs in vitro. Nanotopographies were designed to have a biomimetic interface, based on observations of the oriented myocardial extracellular matrix (ECM) fibers found in vivo. Nanotopographic substrates were integrated with a self-assembling chimeric peptide containing the Arg-Gly-Asp (RGD) cell adhesion motif. Using this platform, cell adhesion to peptide-coated substrates was found to be comparable to that of conventional fibronectin-coated surfaces. Cardiomyocyte organization and structural development were found to be dependent on the nanotopographical feature size in a biphasic manner, with improved development achieved on grooves in the 700-1000 nm range. These findings highlight the capability of surface-functionalized, bioinspired substrates to influence cardiomyocyte development, and the capacity for such platforms to serve as a versatile assay for investigating the role of topographical guidance cues on cell behavior. Such substrates could potentially create more physiologically relevant in vitro cardiac tissues for future drug screening and disease modeling studies.
- Published
- 2016
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31. Spatiotemporal control of cardiac anisotropy using dynamic nanotopographic cues.
- Author
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Mengsteab PY, Uto K, Smith AS, Frankel S, Fisher E, Nawas Z, Macadangdang J, Ebara M, and Kim DH
- Subjects
- Animals, Anisotropy, Cells, Cultured, Myocardial Contraction, Nanostructures ultrastructure, Rats, Sprague-Dawley, Temperature, Transition Temperature, Biocompatible Materials chemistry, Myocytes, Cardiac cytology, Nanostructures chemistry, Polyesters chemistry, Tissue Engineering methods
- Abstract
Coordinated extracellular matrix spatiotemporal reorganization helps regulate cellular differentiation, maturation, and function in vivo, and is therefore vital for the correct formation, maintenance, and healing of complex anatomic structures. In order to evaluate the potential for cultured cells to respond to dynamic changes in their in vitro microenvironment, as they do in vivo, the collective behavior of primary cardiac muscle cells cultured on nanofabricated substrates with controllable anisotropic topographies was studied. A thermally induced shape memory polymer (SMP) was employed to assess the effects of a 90° transition in substrate pattern orientation on the contractile direction and structural organization of cardiomyocyte sheets. Cardiomyocyte sheets cultured on SMPs exhibited anisotropic contractions before shape transition. 48 h after heat-induced shape transition, the direction of cardiomyocyte contraction reoriented significantly and exhibited a bimodal distribution, with peaks at ∼45 and -45° (P < 0.001). Immunocytochemical analysis highlighted the significant structural changes that the cells underwent in response to the shift in underlying topography. The presented results demonstrate that initial anisotropic nanotopographic cues do not permanently determine the organizational fate or contractile properties of cardiomyocytes in culture. Given the importance of surface cues in regulating primary and stem cell development, investigation of such tunable nanotopographies may have important implications for advancing cellular maturation and performance in vitro, as well as improving our understanding of cellular development in response to dynamic biophysical cues., (Published by Elsevier Ltd.)
- Published
- 2016
- Full Text
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32. Multi-Organ toxicity demonstration in a functional human in vitro system composed of four organs.
- Author
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Oleaga C, Bernabini C, Smith AS, Srinivasan B, Jackson M, McLamb W, Platt V, Bridges R, Cai Y, Santhanam N, Berry B, Najjar S, Akanda N, Guo X, Martin C, Ekman G, Esch MB, Langer J, Ouedraogo G, Cotovio J, Breton L, Shuler ML, and Hickman JJ
- Subjects
- Cell Line, Cells, Cultured, Coculture Techniques, Culture Media, Serum-Free, Hep G2 Cells, Humans, Induced Pluripotent Stem Cells, Lab-On-A-Chip Devices, Liver cytology, Models, Biological, Muscle Fibers, Skeletal cytology, Myocytes, Cardiac cytology, Neurons cytology, Drug Evaluation, Preclinical methods, Liver drug effects, Muscle Fibers, Skeletal drug effects, Myocytes, Cardiac drug effects, Neurons drug effects
- Abstract
We report on a functional human model to evaluate multi-organ toxicity in a 4-organ system under continuous flow conditions in a serum-free defined medium utilizing a pumpless platform for 14 days. Computer simulations of the platform established flow rates and resultant shear stress within accepted ranges. Viability of the system was demonstrated for 14 days as well as functional activity of cardiac, muscle, neuronal and liver modules. The pharmacological relevance of the integrated modules were evaluated for their response at 7 days to 5 drugs with known side effects after a 48 hour drug treatment regime. The results of all drug treatments were in general agreement with published toxicity results from human and animal data. The presented phenotypic culture model exhibits a multi-organ toxicity response, representing the next generation of in vitro systems, and constitutes a step towards an in vitro "human-on-a-chip" assay for systemic toxicity screening.
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- 2016
- Full Text
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33. Creating Interactions between Tissue-Engineered Skeletal Muscle and the Peripheral Nervous System.
- Author
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Smith AS, Passey SL, Martin NR, Player DJ, Mudera V, Greensmith L, and Lewis MP
- Subjects
- Animals, Anterior Horn Cells cytology, Anterior Horn Cells drug effects, Cell Differentiation drug effects, Coculture Techniques, Culture Media pharmacology, Extracellular Matrix drug effects, Extracellular Matrix metabolism, Gels, Gene Expression Regulation drug effects, Mice, Motor Neurons cytology, Motor Neurons drug effects, Muscle, Skeletal cytology, Muscle, Skeletal drug effects, Neurites drug effects, Neurites metabolism, Rats, Sprague-Dawley, Synapses drug effects, Synapses metabolism, Tissue Scaffolds chemistry, Muscle, Skeletal physiology, Peripheral Nervous System physiology, Tissue Engineering methods
- Abstract
Effective models of mammalian tissues must allow and encourage physiologically (mimetic) correct interactions between co-cultured cell types in order to produce culture microenvironments as similar as possible to those that would normally occur in vivo. In the case of skeletal muscle, the development of such a culture model, integrating multiple relevant cell types within a biomimetic scaffold, would be of significant benefit for investigations into the development, functional performance, and pathophysiology of skeletal muscle tissue. Although some work has been published regarding the behaviour of in vitro muscle models co-cultured with organotypic slices of CNS tissue or with stem cell-derived neurospheres, little investigation has so far been made regarding the potential to maintain isolated motor neurons within a 3D biomimetic skeletal muscle culture platform. Here, we review the current state of the art for engineering neuromuscular contacts in vitro and provide original data detailing the development of a 3D collagen-based model for the co-culture of primary muscle cells and motor neurons. The devised culture system promotes increased myoblast differentiation, forming arrays of parallel, aligned myotubes on which areas of nerve-muscle contact can be detected by immunostaining for pre- and post-synaptic proteins. Quantitative RT-PCR results indicate that motor neuron presence has a positive effect on myotube maturation, suggesting neural incorporation influences muscle development and maturation in vitro. The importance of this work is discussed in relation to other published neuromuscular co-culture platforms along with possible future directions for the field., (© 2016 S. Karger AG, Basel.)
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- 2016
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34. Charcot-Marie-Tooth Disease Type 4H Resulting from Compound Heterozygous Mutations in FGD4 from Nonconsanguineous Korean Families.
- Author
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Hyun YS, Lee J, Kim HJ, Hong YB, Koo H, Smith AS, Kim DH, Choi BO, and Chung KW
- Subjects
- Amino Acid Sequence, Asian People genetics, DNA Mutational Analysis, Female, Heterozygote, Humans, Male, Middle Aged, Molecular Sequence Data, Mutation, Pedigree, Republic of Korea, Young Adult, Charcot-Marie-Tooth Disease genetics, Microfilament Proteins genetics
- Abstract
Charcot-Marie-Tooth disease type 4H (CMT4H) is an autosomal recessive demyelinating subtype of peripheral enuropathies caused by mutations in the FGD4 gene. Most CMT4H patients are in consanguineous Mediterranean families characterized by early onset and slow progression. We identified two CMT4H patients from a Korean CMT cohort, and performed a detailed genetic and clinical analysis in both cases. Both patients from nonconsanguineous families showed characteristic clinical manifestations of CMT4H including early onset, scoliosis, areflexia, and slow disease progression. Exome sequencing revealed novel compound heterozygous mutations in FGD4 as the underlying cause in both families (p.Arg468Gln and c.1512-2A>C in FC73, p.Met345Thr and c.2043+1G>A (p.Trp663Trpfs*30) in FC646). The missense mutations were located in highly conserved RhoGEF and PH domains which were predicted to be pathogenic in nature by in silico modeling. The CMT4H occurrence frequency was calculated to 0.7% in the Korean demyelinating CMT patients. This study is the first report of CMT4H in Korea. FGD4 assay could be considered as a means of molecular diagnosis for sporadic cases of demyelinating CMT with slow progression., (© 2015 John Wiley & Sons Ltd/University College London.)
- Published
- 2015
- Full Text
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35. Morphological and functional characterization of human induced pluripotent stem cell-derived neurons (iCell Neurons) in defined culture systems.
- Author
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Berry BJ, Akanda N, Smith AS, Long CJ, Schnepper MT, Guo X, and Hickman JJ
- Subjects
- Cell Survival, Cells, Cultured, Humans, Patch-Clamp Techniques, Cell Culture Techniques methods, Induced Pluripotent Stem Cells cytology, Induced Pluripotent Stem Cells physiology, Neurons cytology, Neurons physiology
- Abstract
Pre-clinical testing of drug candidates in animal models is expensive, time-consuming, and often fails to predict drug effects in humans. Industry and academia alike are working to build human-based in vitro test beds and advanced high throughput screening systems to improve the translation of preclinical results to human drug trials. Human neurons derived from induced pluripotent stems cells (hiPSCs) are readily available for use within these test-beds and high throughput screens, but there remains a need to robustly evaluate cellular behavior prior to their incorporation in such systems. This study reports on the characterization of one source of commercially available hiPSC-derived neurons, iCell(®) Neurons, for their long-term viability and functional performance to assess their suitability for integration within advanced in vitro platforms. The purity, morphology, survival, identity, and functional maturation of the cells utilizing different culture substrates and medium combinations were evaluated over 28 days in vitro (DIV). Patch-clamp electrophysiological data demonstrated increased capacity for repetitive firing of action potentials across all culture conditions. Significant differences in cellular maturity, morphology, and functional performance were observed in the different conditions, highlighting the importance of evaluating different surface types and growth medium compositions for application in specific in vitro protocols., (© 2015 American Institute of Chemical Engineers.)
- Published
- 2015
- Full Text
- View/download PDF
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