32 results on '"Stephan, Philipp"'
Search Results
2. Analysing Megasynthetase Mutants at High Throughput Using Droplet Microfluidics**
- Author
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Pourmasoumi, Farzaneh, primary, Hengoju, Sundar, additional, Beck, Katharina, additional, Stephan, Philipp, additional, Klopfleisch, Lukas, additional, Hoernke, Maria, additional, Rosenbaum, Miriam A., additional, and Kries, Hajo, additional
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- 2023
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3. Viki LibraRy
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Babbili, Shaduan, primary, Bönisch, Kevin, additional, Heinrich, Yannick, additional, Stephan, Philipp, additional, Abrami, Giuseppe, additional, and Mehler, Alexander, additional
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- 2023
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4. Early long-term administration of the CSF1R inhibitor PLX3397 ablates microglia and reduces accumulation of intraneuronal amyloid, neuritic plaque deposition and pre-fibrillar oligomers in 5XFAD mouse model of Alzheimer’s disease
- Author
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Justyna Sosna, Stephan Philipp, Ricardo Albay, Jorge Mauricio Reyes-Ruiz, David Baglietto-Vargas, Frank M. LaFerla, and Charles G. Glabe
- Subjects
Alzheimer’s disease ,Amyloid beta ,Plaques ,Intraneuronal amyloid ,Microglia ,Neuroinflammation ,Neurology. Diseases of the nervous system ,RC346-429 ,Geriatrics ,RC952-954.6 - Abstract
Abstract Background Besides the two main classical features of amyloid beta aggregation and tau-containing neurofibrillary tangle deposition, neuroinflammation plays an important yet unclear role in the pathophysiology of Alzheimer’s disease (AD). Microglia are believed to be key mediators of neuroinflammation during AD and responsible for the regulation of brain homeostasis by balancing neurotoxicity and neuroprotective events. We have previously reported evidence that neuritic plaques are derived from dead neurons that have accumulated intraneuronal amyloid and further recruit Iba1-positive cells, which play a role in either neuronal demise or neuritic plaque maturation or both. Methods To study the impact of microglia on neuritic plaque development, we treated two-month-old 5XFAD mice with a selective colony stimulation factor 1 receptor (CSF1R) inhibitor, PLX3397, for a period of 3 months, resulting in a significant ablation of microglia. Directly after this treatment, we analyzed the amount of intraneuronal amyloid and neuritic plaques and performed behavioral studies including Y-maze, fear conditioning and elevated plus maze. Results We found that early long-term PLX3397 administration results in a dramatic reduction of both intraneuronal amyloid as well as neuritic plaque deposition. PLX3397 treated young 5XFAD mice also displayed a significant decrease of soluble fibrillar amyloid oligomers in brain lysates, a depletion of soluble pre-fibrillar oligomers in plasma and an improvement in cognitive function measured by fear conditioning tests. Conclusions Our findings demonstrate that CSF1R signaling, either directly on neurons or mediated by microglia, is crucial for the accumulation of intraneuronal amyloid and formation of neuritic plaques, suggesting that these two events are serially linked in a causal pathway leading to neurodegeneration and neuritic plaque formation. CSF1R inhibitors represent potential preventative or therapeutic approach that target the very earliest stages of the formation of intraneuronal amyloid and neuritic plaques.
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- 2018
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5. Directed Evolution of Piperazic Acid Incorporation by a Nonribosomal Peptide Synthetase**
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Stephan, Philipp, primary, Langley, Chloe, additional, Winkler, Daniela, additional, Basquin, Jérôme, additional, Caputi, Lorenzo, additional, O'Connor, Sarah E., additional, and Kries, Hajo, additional
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- 2023
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6. Gerichtete Evolution von Piperazinsäureeinbau durch eine Nichtribosomale Peptidsynthetase**
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Stephan, Philipp, primary, Langley, Chloe, additional, Winkler, Daniela, additional, Basquin, Jérôme, additional, Caputi, Lorenzo, additional, O'Connor, Sarah E., additional, and Kries, Hajo, additional
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- 2023
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7. Structure-based inhibitors of amyloid beta core suggest a common interface with tau
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Sarah L Griner, Paul Seidler, Jeannette Bowler, Kevin A Murray, Tianxiao Peter Yang, Shruti Sahay, Michael R Sawaya, Duilio Cascio, Jose A Rodriguez, Stephan Philipp, Justyna Sosna, Charles G Glabe, Tamir Gonen, and David S Eisenberg
- Subjects
amyloid beta ,tau ,inhibitor ,MicroED ,amyloid ,cross-seeding ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
Alzheimer’s disease (AD) pathology is characterized by plaques of amyloid beta (Aβ) and neurofibrillary tangles of tau. Aβ aggregation is thought to occur at early stages of the disease, and ultimately gives way to the formation of tau tangles which track with cognitive decline in humans. Here, we report the crystal structure of an Aβ core segment determined by MicroED and in it, note characteristics of both fibrillar and oligomeric structure. Using this structure, we designed peptide-based inhibitors that reduce Aβ aggregation and toxicity of already-aggregated species. Unexpectedly, we also found that these inhibitors reduce the efficiency of Aβ-mediated tau aggregation, and moreover reduce aggregation and self-seeding of tau fibrils. The ability of these inhibitors to interfere with both Aβ and tau seeds suggests these fibrils share a common epitope, and supports the hypothesis that cross-seeding is one mechanism by which amyloid is linked to tau aggregation and could promote cognitive decline.
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- 2019
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8. Screening megasynthetase mutants at high throughput using droplet microfluidics
- Author
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Pourmasoumi, Farzaneh, primary, Hengoju, Sundar, additional, Beck, Katharina, additional, Stephan, Philipp, additional, Klopfleisch, Lukas, additional, Hoernke, Maria, additional, Rosenbaum, Miriam A., additional, and Kries, Hajo, additional
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- 2023
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- View/download PDF
9. Atomic structures of fibrillar segments of hIAPP suggest tightly mated β-sheets are important for cytotoxicity
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Pascal Krotee, Jose A Rodriguez, Michael R Sawaya, Duilio Cascio, Francis E Reyes, Dan Shi, Johan Hattne, Brent L Nannenga, Marie E Oskarsson, Stephan Philipp, Sarah Griner, Lin Jiang, Charles G Glabe, Gunilla T Westermark, Tamir Gonen, and David S Eisenberg
- Subjects
islet amyloid polypeptide ,amyloid fibril ,cytotoxicity ,MicroED ,Type-II Diabetes ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
hIAPP fibrils are associated with Type-II Diabetes, but the link of hIAPP structure to islet cell death remains elusive. Here we observe that hIAPP fibrils are cytotoxic to cultured pancreatic β-cells, leading us to determine the structure and cytotoxicity of protein segments composing the amyloid spine of hIAPP. Using the cryoEM method MicroED, we discover that one segment, 19–29 S20G, forms pairs of β-sheets mated by a dry interface that share structural features with and are similarly cytotoxic to full-length hIAPP fibrils. In contrast, a second segment, 15–25 WT, forms non-toxic labile β-sheets. These segments possess different structures and cytotoxic effects, however, both can seed full-length hIAPP, and cause hIAPP to take on the cytotoxic and structural features of that segment. These results suggest that protein segment structures represent polymorphs of their parent protein and that segment 19–29 S20G may serve as a model for the toxic spine of hIAPP.
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- 2017
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10. Engineering DNA-Templated Nonribosomal Peptide Synthesis
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Huang, Hsin-Mei, Stephan, Philipp, and Kries, Hajo
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- 2021
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11. Engineered Nonribosomal Peptide Synthetase Shows Opposite Amino Acid Loading and Condensation Specificity
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Stanišić, Aleksa, primary, Hüsken, Annika, additional, Stephan, Philipp, additional, Niquille, David L., additional, Reinstein, Jochen, additional, and Kries, Hajo, additional
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- 2021
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12. Generic Architecture for the Automatic Parametrization of Production Machine Assembly Programs
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Stephan, Philipp, primary, Fisch, Jessica, additional, Can, Alperen, additional, Heimann, Oliver, additional, Thiele, Gregor, additional, and Krüger, Jörg, additional
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- 2021
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13. An Engineered Nonribosomal Peptide Synthetase Shows Opposite Amino Acid Loading and Condensation Specificity
- Author
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Stanišić, Aleksa, primary, Hüsken, Annika, primary, Stephan, Philipp, primary, Niquille, David L., primary, Reinstein, Jochen, primary, and Kries, Hajo, primary
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- 2021
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14. Automated continuous learn and improvement process of energy efficiency in manufacturing
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Can, Alperen, primary, Fisch, Jessica, additional, Stephan, Philipp, additional, Thiele, Gregor, additional, and Kruger, Jorg, additional
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- 2020
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15. Engineering DNA templated nonribosomal peptide synthesis
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Huang, Hsin-Mei, primary, Stephan, Philipp, additional, and Kries, Hajo, additional
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- 2020
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16. TRPC1- and TRPC3-dependent Ca2+signaling in mouse cortical astrocytes affects injury-evoked astrogliosisin vivo
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Stephan Philipp, Andreas Keller, Frank Kirchhoff, Veit Flockerzi, Thabet Belkacemi, Anja Scheller, Ulrich Wissenbach, Eckart Meese, Lutz Birnbaumer, Alexander Niermann, Petra Weissgerber, Petra Leidinger, Andreas Beck, Xianshu Bai, Laura Hofmann, and Christina Backes
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0301 basic medicine ,biology ,medicine.disease ,Astrogliosis ,TRPC1 ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,Transient receptor potential channel ,030104 developmental biology ,0302 clinical medicine ,TRPC3 ,medicine.anatomical_structure ,Neurology ,Gliosis ,medicine ,Glutamate aspartate transporter ,biology.protein ,medicine.symptom ,Neuroscience ,030217 neurology & neurosurgery ,TRPC ,Astrocyte - Abstract
Following brain injury astrocytes change into a reactive state, proliferate and grow into the site of lesion, a process called astrogliosis, initiated and regulated by changes in cytoplasmic Ca2+ . Transient receptor potential canonical (TRPC) channels may contribute to Ca2+ influx but their presence and possible function in astrocytes is not known. By RT-PCR and RNA sequencing we identified transcripts of Trpc1, Trpc2, Trpc3, and Trpc4 in FACS-sorted glutamate aspartate transporter (GLAST)-positive cultured mouse cortical astrocytes and subcloned full-length Trpc1 and Trpc3 cDNAs from these cells. Ca2+ entry in cortical astrocytes depended on TRPC3 and was increased in the absence of Trpc1. After co-expression of Trpc1 and Trpc3 in HEK-293 cells both proteins co-immunoprecipitate and form functional heteromeric channels, with TRPC1 reducing TRPC3 activity. In vitro, lack of Trpc3 reduced astrocyte proliferation and migration whereas the TRPC3 gain-of-function moonwalker mutation and Trpc1 deficiency increased astrocyte migration. In vivo, astrogliosis and cortex edema following stab wound injury were reduced in Trpc3-/- but increased in Trpc1-/- mice. In summary, our results show a decisive contribution of TRPC3 to astrocyte Ca2+ signaling, which is even augmented in the absence of Trpc1, in particular following brain injury. Targeted therapies to reduce TRPC3 channel activity in astrocytes might therefore be beneficial in traumatic brain injury.
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- 2017
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17. Author response: Structure-based inhibitors of amyloid beta core suggest a common interface with tau
- Author
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Stephan Philipp, Sarah Griner, David Eisenberg, Duilio Cascio, Jose A. Rodriguez, Shruti Sahay, Kevin A. Murray, Tamir Gonen, Paul M. Seidler, Justyna Sosna, Jeannette Bowler, Charles G. Glabe, Michael R. Sawaya, and Tianxiao Peter Yang
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Core (optical fiber) ,Materials science ,biology ,Interface (Java) ,Amyloid beta ,Biophysics ,biology.protein ,Structure based - Published
- 2019
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18. P4‐697: ATOMIC STRUCTURES OF A SINGLE CHAIN ANTIBODY THAT BINDS AND INHIBITS SEEDING BY TAU OLIGOMERS
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Romany Abskharon, Duilio Cascio, Charles G. Glabe, David Eisenberg, Paul M. Seidler, Michael R. Sawaya, and Stephan Philipp
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biology ,Epidemiology ,Chemistry ,Health Policy ,Single chain ,Psychiatry and Mental health ,Cellular and Molecular Neuroscience ,Developmental Neuroscience ,Biophysics ,biology.protein ,Seeding ,Neurology (clinical) ,Geriatrics and Gerontology ,Antibody - Published
- 2019
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19. Effects of climate change on regional energy systems
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Hausl, Stephan Philipp, Hamacher, Thomas (Prof. Dr.), and Streicher, Wolfgang (Prof. Dr.)
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Ingenieurwissenschaften ,ddc:620 ,Climate change, Energy system modelling, Regional energy systems, Regional climate models, Energy system optimisation, Space heating demand, Cooling demand, Renewable energies, GIS, RESRO ,Klimawandel, Energiesystemmodellierung, Regionale Energiesysteme, Regionale Klimamodelle, Energiesystemoptimierung, Heizbedarf, Kühlbedarf, Erneuerbare Energien, GIS, RESRO - Abstract
In vorliegender Arbeit werden die Auswirkungen des Klimawandels auf regionale Energiesysteme untersucht. Auf Basis räumlich hochaufgelöster Klima- und Gebäudedaten werden hierzu der Wärme- und Kältebedarf für drei ländlich geprägte Regionen in Österreich bis zum Jahr 2050 modelliert. Die Ergebnisse finden Eingang in eine Energiesystemoptimierung, bei der die kostenoptimale Energiebereitstellung unter Berücksichtigung regional verfügbarer Potenziale erneuerbarer Energien berechnet wird. Neben den Erkenntnissen zur klimabedingten Verschiebung zwischen Wärme- und Kältebedarf in Gebäuden zeigt die Arbeit somit Konzepte zur zukünftigen Zusammensetzung regionaler Energiesysteme auf. In the following thesis effects of climate change on regional energy systems are examined. Heating and cooling demand for three rural regions in Austria are modelled until the year 2050 using climate and building data with high spatial resolution. The outcomes are then fed into an energy system optimisation, where the cost-optimum energy supply considering regionally available renewable energy potentials is calculated. The thesis provides findings about the climate-induced shift between heating and cooling demand in buildings, and shows concepts concerning the future composition of regional energy systems.
- Published
- 2019
20. A background Ca2+entry pathway mediated by TRPC1/TRPC4 is critical for development of pathological cardiac remodelling
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Veit Flockerzi, Frank Schweda, Ulrich Laufs, Laura Schröder, Tao He, Juan E. Camacho Londoño, Marc Freichel, Stefanie Mannebach, Ilka Mathar, Martin Oberhofer, Lars Kaestner, Peter Lipp, Stephan Philipp, Wiebke Tabellion, Karin P. Hammer, Jan Christian Reil, Alexander Dietrich, Lutz Birnbaumer, Julia Camacho Londoño, and Qinghai Tian
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medicine.medical_specialty ,Otras Ciencias Biológicas ,Angiotensinogen ,Cardiomegaly ,Muscle hypertrophy ,Ciencias Biológicas ,purl.org/becyt/ford/1 [https] ,TRPC3 ,Basic Science ,Internal medicine ,Cardiac remodelling ,medicine ,Animals ,Homeostasis ,Myocytes, Cardiac ,Calcium Signaling ,purl.org/becyt/ford/1.6 [https] ,Ventricular remodeling ,TRPC ,TRPC Cation Channels ,Mice, Knockout ,Ventricular Remodeling ,business.industry ,Angiotensin II ,Cardiac myocyte ,Hemodynamics ,TRPC1/TRPC4 ,medicine.disease ,Endocrinology ,Ion channels ,Knockout mouse ,cardiovascular system ,Background Ca2+ entry ,Calcium ,Calcium Channels ,Cardiology and Cardiovascular Medicine ,business ,CIENCIAS NATURALES Y EXACTAS - Abstract
Aims: Pathological cardiac hypertrophy is a major predictor for the development of cardiac diseases. It is associated with chronic neurohumoral stimulation and with altered cardiac Ca2+ signalling in cardiomyocytes. TRPC proteins form agonist-induced cation channels, but their functional role for Ca2+ homeostasis in cardiomyocytes during fast cytosolic Ca2+ cycling and neurohumoral stimulation leading to hypertrophy is unknown. Methods and results: In a systematic analysis of multiple knockout mice using fluorescence imaging of electrically paced adult ventricular cardiomyocytes and Mn2+-quench microfluorimetry, we identified a background Ca2+ entry (BGCE) pathway that critically depends on TRPC1/C4 proteins but not others such as TRPC3/C6. Reduction of BGCE in TRPC1/C4-deficient cardiomyocytes lowers diastolic and systolic Ca2+ concentrations both, under basal conditions and under neurohumoral stimulation without affecting cardiac contractility measured in isolated hearts and in vivo. Neurohumoral-induced cardiac hypertrophy as well as the expression of foetal genes (ANP, BNP) and genes regulated by Ca2+-dependent signalling (RCAN1-4, myomaxin) was reduced in TRPC1/C4 knockout (DKO), but not in TRPC1- or TRPC4-single knockout mice. Pressure overload-induced hypertrophy and interstitial fibrosis were both ameliorated in TRPC1/C4-DKO mice, whereas they did not show alterations in other cardiovascular parameters contributing to systemic neurohumoral-induced hypertrophy such as renin secretion and blood pressure. Conclusions: The constitutively active TRPC1/C4-dependent BGCE fine-tunes Ca2+ cycling in beating adult cardiomyocytes. TRPC1/C4-gene inactivation protects against development of maladaptive cardiac remodelling without altering cardiac or extracardiac functions contributing to this pathogenesis. Fil: Camacho Londoño, Juan E.. Pharmakologisches Institut; Alemania. Experimentelle und Klinische Pharmakologie und Toxikologie; Alemania. German Centre for Cardiovascular Research; Alemania Fil: Tian, Qinghai. Institut fur Molekulare Zellbiologie; Alemania Fil: Hammer, Karin. Institut fur Molekulare Zellbiologie; Alemania Fil: Schröder, Laura. Institut fur Molekulare Zellbiologie; Alemania Fil: Camacho Londoño, Julia. Experimentelle und Klinische Pharmakologie und Toxikologie; Alemania Fil: Reil, Jan C.. Universitat des Saarlandes; Alemania Fil: He, Tao. German Centre for Cardiovascular Research; Alemania. Research Unit Cardiac Epigenetics; Alemania. Tongji Hospital; China Fil: Oberhofer, Martin. Institut fur Molekulare Zellbiologie; Alemania Fil: Mannebach, Stefanie. Experimentelle und Klinische Pharmakologie und Toxikologie; Alemania Fil: Mathar, Ilka. Pharmakologisches Institut; Alemania. Experimentelle und Klinische Pharmakologie und Toxikologie; Alemania Fil: Philipp, Stephan E.. Experimentelle und Klinische Pharmakologie und Toxikologie; Alemania Fil: Tabellion, Wiebke. Institut fur Molekulare Zellbiologie; Alemania Fil: Schweda, Frank. Universitat Regensburg; Alemania Fil: Dietrich, Alexander. Walther-Straub-Institut fur Pharmakologie und Toxikologie; Alemania Fil: Kaestner, Lars. Institut fur Molekulare Zellbiologie; Alemania Fil: Laufs, Ulrich. Universitat des Saarlandes; Alemania Fil: Birnbaumer, Lutz. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Transmembrane Signaling Group; Alemania Fil: Flockerzi, Veit. Experimentelle und Klinische Pharmakologie und Toxikologie; Alemania Fil: Freichel, Marc. Pharmakologisches Institut; Alemania. Experimentelle und Klinische Pharmakologie und Toxikologie; Alemania. German Centre for Cardiovascular Research; Alemania Fil: Lipp, Peter. Institut fur Molekulare Zellbiologie; Alemania
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- 2015
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21. Auswirkungen des Klimawandels auf regionale Energiesysteme
- Author
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Hamacher, Thomas (Prof. Dr.), Streicher, Wolfgang (Prof. Dr.), Hausl, Stephan Philipp, Hamacher, Thomas (Prof. Dr.), Streicher, Wolfgang (Prof. Dr.), and Hausl, Stephan Philipp
- Abstract
In vorliegender Arbeit werden die Auswirkungen des Klimawandels auf regionale Energiesysteme untersucht. Auf Basis räumlich hochaufgelöster Klima- und Gebäudedaten werden hierzu der Wärme- und Kältebedarf für drei ländlich geprägte Regionen in Österreich bis zum Jahr 2050 modelliert. Die Ergebnisse finden Eingang in eine Energiesystemoptimierung, bei der die kostenoptimale Energiebereitstellung unter Berücksichtigung regional verfügbarer Potenziale erneuerbarer Energien berechnet wird. Neben den Erkenntnissen zur klimabedingten Verschiebung zwischen Wärme- und Kältebedarf in Gebäuden zeigt die Arbeit somit Konzepte zur zukünftigen Zusammensetzung regionaler Energiesysteme auf., In the following thesis effects of climate change on regional energy systems are examined. Heating and cooling demand for three rural regions in Austria are modelled until the year 2050 using climate and building data with high spatial resolution. The outcomes are then fed into an energy system optimisation, where the cost-optimum energy supply considering regionally available renewable energy potentials is calculated. The thesis provides findings about the climate-induced shift between heating and cooling demand in buildings, and shows concepts concerning the future composition of regional energy systems.
- Published
- 2019
22. Common fibrillar spines of amyloid-β and human islet amyloid polypeptide revealed by microelectron diffraction and structure-based inhibitors
- Author
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Michael R. Sawaya, Pascal Krotee, Paul M. Seidler, Dan Shi, Charles G. Glabe, Sarah Griner, Lorena Saelices, David Eisenberg, Kevin A. Murray, Duilio Cascio, Ji Lee, Stephan Philipp, Tamir Gonen, Lin Jiang, and Jose Rodriguez
- Subjects
Models, Molecular ,0301 basic medicine ,Aging ,Molecular model ,Amyloid β ,Neurodegenerative ,Crystallography, X-Ray ,Alzheimer's Disease ,Biochemistry ,Medical and Health Sciences ,Mice ,0302 clinical medicine ,Models ,Insulin-Secreting Cells ,2.1 Biological and endogenous factors ,Aetiology ,Cytotoxicity ,Nootropic Agents ,Neurons ,Microscopy ,geography.geographical_feature_category ,Tumor ,Crystallography ,Chemistry ,Diabetes ,amyloid ,Molecular Bases of Disease ,Neurofibrillary Tangles ,Biological Sciences ,Islet ,Recombinant Proteins ,Islet Amyloid Polypeptide ,inhibitor ,Neurological ,electron diffraction ,crystal structure ,Biochemistry & Molecular Biology ,Amyloid ,human islet amyloid polypeptide ,Structural similarity ,amyloid-β ,Fibril ,Protein Aggregation, Pathological ,Electron ,peptide interaction ,Cell Line ,03 medical and health sciences ,Microscopy, Electron, Transmission ,Pathological ,Cell Line, Tumor ,Acquired Cognitive Impairment ,Animals ,Humans ,Hypoglycemic Agents ,Transmission ,Molecular Biology ,Metabolic and endocrine ,geography ,Amyloid beta-Peptides ,Computational Biology ,Molecular ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Cell Biology ,Protein Aggregation ,Peptide Fragments ,Rats ,Brain Disorders ,030104 developmental biology ,HEK293 Cells ,Amino Acid Substitution ,Drug Design ,Mutation ,Chemical Sciences ,Biophysics ,X-Ray ,Structure based ,Dementia ,030217 neurology & neurosurgery - Abstract
Amyloid-β (Aβ) and human islet amyloid polypeptide (hIAPP) aggregate to form amyloid fibrils that deposit in tissues and are associated with Alzheimer's disease (AD) and type II diabetes (T2D), respectively. Individuals with T2D have an increased risk of developing AD, and conversely, AD patients have an increased risk of developing T2D. Evidence suggests that this link between AD and T2D might originate from a structural similarity between aggregates of Aβ and hIAPP. Using the cryoEM method microelectron diffraction, we determined the atomic structures of 11-residue segments from both Aβ and hIAPP, termed Aβ(24–34) WT and hIAPP(19–29) S20G, with 64% sequence similarity. We observed a high degree of structural similarity between their backbone atoms (0.96-Å root mean square deviation). Moreover, fibrils of these segments induced amyloid formation through self- and cross-seeding. Furthermore, inhibitors designed for one segment showed cross-efficacy for full-length Aβ and hIAPP and reduced cytotoxicity of both proteins, although by apparently blocking different cytotoxic mechanisms. The similarity of the atomic structures of Aβ(24–34) WT and hIAPP(19–29) S20G offers a molecular model for cross-seeding between Aβ and hIAPP.
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- 2018
23. Early long-term administration of the CSF1R inhibitor PLX3397 ablates microglia and reduces accumulation of intraneuronal amyloid, neuritic plaque deposition and pre-fibrillar oligomers in 5XFAD mouse model of Alzheimer's disease
- Author
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Ricardo Albay, Frank M. LaFerla, Charles G. Glabe, Jorge Mauricio Reyes-Ruiz, David Baglietto-Vargas, Justyna Sosna, and Stephan Philipp
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0301 basic medicine ,Amyloid ,Amyloid beta ,Aminopyridines ,Amyloidogenic Proteins ,Mice, Transgenic ,Plaque, Amyloid ,lcsh:Geriatrics ,lcsh:RC346-429 ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,Mice ,0302 clinical medicine ,Neuroinflammation ,Alzheimer Disease ,medicine ,Animals ,Pyrroles ,Senile plaques ,Molecular Biology ,lcsh:Neurology. Diseases of the nervous system ,Neurons ,biology ,Microglia ,Chemistry ,Neurodegeneration ,Neurotoxicity ,Brain ,Neurofibrillary tangle ,Alzheimer's disease ,medicine.disease ,3. Good health ,Cell biology ,lcsh:RC952-954.6 ,Disease Models, Animal ,030104 developmental biology ,medicine.anatomical_structure ,Plaques ,Receptors, Granulocyte-Macrophage Colony-Stimulating Factor ,biology.protein ,Intraneuronal amyloid ,Neurology (clinical) ,Alzheimer’s disease ,030217 neurology & neurosurgery ,Research Article - Abstract
Background Besides the two main classical features of amyloid beta aggregation and tau-containing neurofibrillary tangle deposition, neuroinflammation plays an important yet unclear role in the pathophysiology of Alzheimer’s disease (AD). Microglia are believed to be key mediators of neuroinflammation during AD and responsible for the regulation of brain homeostasis by balancing neurotoxicity and neuroprotective events. We have previously reported evidence that neuritic plaques are derived from dead neurons that have accumulated intraneuronal amyloid and further recruit Iba1-positive cells, which play a role in either neuronal demise or neuritic plaque maturation or both. Methods To study the impact of microglia on neuritic plaque development, we treated two-month-old 5XFAD mice with a selective colony stimulation factor 1 receptor (CSF1R) inhibitor, PLX3397, for a period of 3 months, resulting in a significant ablation of microglia. Directly after this treatment, we analyzed the amount of intraneuronal amyloid and neuritic plaques and performed behavioral studies including Y-maze, fear conditioning and elevated plus maze. Results We found that early long-term PLX3397 administration results in a dramatic reduction of both intraneuronal amyloid as well as neuritic plaque deposition. PLX3397 treated young 5XFAD mice also displayed a significant decrease of soluble fibrillar amyloid oligomers in brain lysates, a depletion of soluble pre-fibrillar oligomers in plasma and an improvement in cognitive function measured by fear conditioning tests. Conclusions Our findings demonstrate that CSF1R signaling, either directly on neurons or mediated by microglia, is crucial for the accumulation of intraneuronal amyloid and formation of neuritic plaques, suggesting that these two events are serially linked in a causal pathway leading to neurodegeneration and neuritic plaque formation. CSF1R inhibitors represent potential preventative or therapeutic approach that target the very earliest stages of the formation of intraneuronal amyloid and neuritic plaques.
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- 2017
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24. Cover Feature: Precursor-Directed Diversification of Cyclic Tetrapeptidic Pseudoxylallemycins (ChemBioChem 21/2018)
- Author
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Guo, Huijuan, primary, Schmidt, Alexander, additional, Stephan, Philipp, additional, Raguž, Luka, additional, Braga, Daniel, additional, Kaiser, Marcel, additional, Dahse, Hans-Martin, additional, Weigel, Christiane, additional, Lackner, Gerald, additional, and Beemelmanns, Christine, additional
- Published
- 2018
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25. Precursor-Directed Diversification of Cyclic Tetrapeptidic Pseudoxylallemycins
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Guo, Huijuan, primary, Schmidt, Alexander, additional, Stephan, Philipp, additional, Raguž, Luka, additional, Braga, Daniel, additional, Kaiser, Marcel, additional, Dahse, Hans-Martin, additional, Weigel, Christiane, additional, Lackner, Gerald, additional, and Beemelmanns, Christine, additional
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- 2018
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26. The development of an authentic Mexican Food concept in Europe
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Grafl, Stephan Philipp and Duarte, Miguel Munoz
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Food concept ,Authentic mexican cuisine ,Development ,Ciências Sociais::Economia e Gestão [Domínio/Área Científica] ,Casual dining - Abstract
Mexican food is on-trend. Top chefs around the world appreciate the variety of the cuisine and see a tremendous potential in it. In Europe, people are lacking knowledge of Mexican cuisine, because Mexican food services are rare in terms of authenticity and an adapted version of it is prevalent. Therefore, this work project focuses on the development of authentic Mexican food concept in Europe. Based on actual findings as well as primary and secondary research, four potential concepts are elaborated and evaluated in order to come up with a top concept – “Mercado Auténtico” with its mission, target markets, positioning and marketing-mix.
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- 2017
27. Atomic structures of fibrillar segments of hIAPP suggest tightly mated beta-sheets are important or cytotoxicity
- Author
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David Eisenberg, Pascal Krotee, Stephan Philipp, Michael R. Sawaya, Jose A. Rodriguez, Tamir Gonen, Marie E. Oskarsson, Gunilla T. Westermark, Duilio Cascio, Sarah Griner, Dan Shi, Charles G. Glabe, Brent L. Nannenga, Francis E. Reyes, Johan Hattne, and Lin Jiang
- Subjects
0301 basic medicine ,Protein Conformation ,Cell- och molekylärbiologi ,Biochemistry ,Type ii diabetes ,Insulin-Secreting Cells ,biophysics ,amyloid fibril ,Cytotoxic T cell ,structural biology ,Biology (General) ,Cytotoxicity ,Cells, Cultured ,Cultured ,Chemistry ,General Neuroscience ,General Medicine ,Biophysics and Structural Biology ,Islet Amyloid Polypeptide ,Cell and molecular biology ,Endokrinologi och diabetes ,Medicine ,cytotoxicity ,MicroED ,Research Article ,Human ,Programmed cell death ,Amyloid ,QH301-705.5 ,Cell Survival ,Science ,Cells ,Endocrinology and Diabetes ,Fibril ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,Type-II Diabetes ,Humans ,biochemistry ,human ,030102 biochemistry & molecular biology ,General Immunology and Microbiology ,Cryoelectron Microscopy ,030104 developmental biology ,Structural biology ,Biophysics ,Protein Conformation, beta-Strand ,beta-Strand ,Generic health relevance ,Biochemistry and Cell Biology ,Cell and Molecular Biology - Abstract
hIAPP fibrils are associated with Type-II Diabetes, but the link of hIAPP structure to islet cell death remains elusive. Here we observe that hIAPP fibrils are cytotoxic to cultured pancreatic β-cells, leading us to determine the structure and cytotoxicity of protein segments composing the amyloid spine of hIAPP. Using the cryoEM method MicroED, we discover that one segment, 19–29 S20G, forms pairs of β-sheets mated by a dry interface that share structural features with and are similarly cytotoxic to full-length hIAPP fibrils. In contrast, a second segment, 15–25 WT, forms non-toxic labile β-sheets. These segments possess different structures and cytotoxic effects, however, both can seed full-length hIAPP, and cause hIAPP to take on the cytotoxic and structural features of that segment. These results suggest that protein segment structures represent polymorphs of their parent protein and that segment 19–29 S20G may serve as a model for the toxic spine of hIAPP. DOI: http://dx.doi.org/10.7554/eLife.19273.001, eLife digest In Type-II Diabetes, an individual’s cells fail to respond correctly to the hormone insulin, leaving them unable to counteract high levels of sugar in the blood. Another hormone, human islet amyloid polypeptide (hIAPP), works with insulin to regulate blood sugar levels. hIAPP is an amyloid protein, which means that it can lose its normal structure and form fibrils. Fibrils are difficult for cells to break down and are often associated with disease. Indeed, fibrils of hIAPP often form in the pancreas as part of Type-II Diabetes. Some studies have shown that hIAPP fibrils are toxic to pancreatic cells and worsen the symptoms of Type-II Diabetes. Others suggest that it is the process of fibril formation that is toxic, not the fibrils themselves. Although the structures of the fibrils have been described, whether these structures cause cell toxicity has not been investigated. Krotee et al. have now explored the structures of two overlapping segments of hIAPP using a new cryo electron microscopy method called MicroED that is ideal for studying such segments. One segment, called 19-29 S20G, forms a standard amyloid fibril structure that is similar to the structure of full-length hIAPP fibrils. Adding these segments to human cells causes similar levels of toxicity as the full-length hIAPP fibrils. The second segment, called 15-25 WT, forms a non-toxic structure that is less stable than standard amyloid fibrils. The results presented by Krotee et al. support the view that standard amyloid fibril structures are toxic to cells and suggest that 19-29 S20G may be a good model to use when studying how full-length hIAPP fibrils behave. The structure of 19-29 S20G may also be useful as a template for designing molecules that block amyloid fibril growth. If amyloid fibrils cause cell toxicity in the pancreas, then these molecules could be used to treat Type-II Diabetes. DOI: http://dx.doi.org/10.7554/eLife.19273.002
- Published
- 2017
28. Author response: Atomic structures of fibrillar segments of hIAPP suggest tightly mated β-sheets are important for cytotoxicity
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Michael R. Sawaya, Lin Jiang, Stephan Philipp, Sarah Griner, Jose A. Rodriguez, David Eisenberg, Dan Shi, Gunilla T. Westermark, Pascal Krotee, Charles G. Glabe, Duilio Cascio, Marie E. Oskarsson, Tamir Gonen, Johan Hattne, Francis E. Reyes, and Brent L. Nannenga
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Chemistry ,Biophysics ,Cytotoxicity - Published
- 2016
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29. Differences and Similarities in TRAIL- and Tumor Necrosis Factor-Mediated Necroptotic Signaling in Cancer Cells
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Carina Saggau, Christoph Arenz, Justyna Sosna, Thomas Pinkert, Anna Trauzold, Johannes Plenge, Alexandra Föll, Stefan Schütze, Dieter Adam, Johaiber Fuchslocher Chico, Stephan Philipp, Ingo Schmitz, Holger Kalthoff, Jürgen Fritsch, and Helmholtz Centre for infection research
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0301 basic medicine ,Programmed cell death ,Necroptosis ,ATG5 ,Apoptosis ,Mitochondrion ,Biology ,Jurkat cells ,TNF-Related Apoptosis-Inducing Ligand ,03 medical and health sciences ,Jurkat Cells ,Mice ,Necrosis ,Cell Line, Tumor ,Neoplasms ,Animals ,Humans ,Molecular Biology ,Cell Biology ,Articles ,Mitochondria ,030104 developmental biology ,Cancer cell ,Immunology ,Tumor Necrosis Factors ,Cancer research ,Tumor necrosis factor alpha ,Signal transduction ,HT29 Cells ,Signal Transduction - Abstract
Recently, a type of regulated necrosis (RN) called necroptosis was identified to be involved in many pathophysiological processes and emerged as an alternative method to eliminate cancer cells. However, only a few studies have elucidated components of TRAIL-mediated necroptosis useful for anticancer therapy. Therefore, we have compared this type of cell death to tumor necrosis factor (TNF)-mediated necroptosis and found similar signaling through acid and neutral sphingomyelinases, the mitochondrial serine protease HtrA2/Omi, Atg5, and vacuolar H(+)-ATPase. Notably, executive mechanisms of both TRAIL- and TNF-mediated necroptosis are independent of poly(ADP-ribose) polymerase 1 (PARP-1), and depletion of p38α increases the levels of both types of cell death. Moreover, we found differences in signaling between TNF- and TRAIL-mediated necroptosis, e.g., a lack of involvement of ubiquitin carboxyl hydrolase L1 (UCH-L1) and Atg16L1 in executive mechanisms of TRAIL-mediated necroptosis. Furthermore, we discovered indications of an altered involvement of mitochondrial components, since overexpression of the mitochondrial protein Bcl-2 protected Jurkat cells from TRAIL- and TNF-mediated necroptosis, and overexpression of Bcl-XL diminished only TRAIL-induced necroptosis in Colo357 cells. Furthermore, TRAIL does not require receptor internalization and endosome-lysosome acidification to mediate necroptosis. Taken together, pathways described for TRAIL-mediated necroptosis and differences from those for TNF-mediated necroptosis might be unique targets to increase or modify necroptotic signaling and eliminate tumor cells more specifically in future anticancer approaches.
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- 2016
30. Cancer and necroptosis: friend or foe?
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Dieter Adam, Justyna Sosna, and Stephan Philipp
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0301 basic medicine ,Cell signaling ,Necrosis ,Necroptosis ,Context (language use) ,Apoptosis ,Biology ,Metastasis ,TNF-Related Apoptosis-Inducing Ligand ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,Neoplasms ,medicine ,Humans ,Molecular Biology ,Pharmacology ,Tumor Necrosis Factor-alpha ,Cancer ,Cell Biology ,medicine.disease ,Cell biology ,030104 developmental biology ,Molecular Medicine ,Tumor necrosis factor alpha ,Signal transduction ,medicine.symptom ,Neuroscience ,Signal Transduction - Abstract
Regulated cell death is one major factor to ensure homoeostasis in multicellular organisms. For decades, apoptosis was considered as the sole form of regulated cell death, whereas necrosis was believed to be accidental and unregulated. Due to this view, research on necrosis was somewhat neglected, especially in the field of anti-cancer treatment. However, new interest in necrosis has been sparked by the recent discovery of different forms of necrosis that show indeed regulated pathways. More and more studies now address the molecular pathways of regulated necrosis and its connections within the cellular signaling networks. Necroptosis, a subform of regulated necrosis, has so far hardly been focused on with regard to a future treatment of cancer patients and may emerge as a novel and effective approach to eliminate tumor cells. However, and similar to apoptosis, tumor cells can develop resistances against necroptosis to ensure their own survival. In this context, new molecules that enhance necroptosis are currently being identified to overcome such resistances. This review discusses cancer and necroptosis as friends or foes, i.e. the options to exploit necroptosis in anti-cancer therapies ("foes"), but also potential limitations that may block or actually cause necroptosis to act in a protumoral manner ("friends"). The balance between these two possible roles will determine whether necroptosis can indeed be used as a promising tool for early diagnosis of tumors, prevention of metastasis and anti-cancer treatment.
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- 2016
31. Homoharringtonine, a clinically approved anti-leukemia drug, sensitizes tumor cells for TRAIL-induced necroptosis
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Holger Kalthoff, Johannes Plenge, Dieter Adam, Justyna Sosna, and Stephan Philipp
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Regulated necrosis ,Harringtonines ,Myeloid ,Necroptosis ,Antineoplastic Agents ,TRAIL ,Pharmacology ,Biology ,Biochemistry ,TNF-Related Apoptosis-Inducing Ligand ,Necrosis ,RIPK1 ,Cell Line, Tumor ,Neoplasms ,medicine ,Humans ,Cytotoxic T cell ,Cycloheximide ,Molecular Biology ,Protein Synthesis Inhibitors ,Research ,Cancer ,Cell Biology ,medicine.disease ,Receptors, TNF-Related Apoptosis-Inducing Ligand ,medicine.anatomical_structure ,Apoptosis ,Homoharringtonine ,Cancer cell ,Signal Transduction - Abstract
Background One hallmark of cancer cells is their ability to evade physiologic signals causing regulated cell death (RCD). Correspondingly, TRAIL-based therapies to eliminate human cancer cells via enforced induction of apoptosis have been established and represent a promising approach in anti-cancer research. However, due to frequently appearing intrinsic or acquired resistances of tumor cells against apoptosis, TRAIL-based apoptotic strategies for the treatment of cancer patients have shown limited efficacy. As a potential alternative, regulated necrosis (and necroptosis triggered e.g. by TRAIL receptors 1/2) has recently gained considerable attention. Regulated necrosis represents a mode of RCD molecularly distinct from apoptosis whose potential in anti-cancer therapy is almost uncharacterized. Since in most cancer cells survival pathways counteract the effects of TRAIL-induced RCD, sensitizers such as cycloheximide (CHX) are frequently added in cell culture to overcome this problem. Unfortunately, those sensitizers are cytotoxic and therefore not suitable for the treatment of cancer patients. Here, we have alternatively employed homoharringtonine (HHT), a plant alkaloid which was recently approved by the U. S. Food and Drug Administration to treat patients with chronic myeloid lymphoma. Results We show that HHT is an efficient sensitizer for TRAIL-induced necroptosis in multiple human cancer cell lines. In addition, HHT-enhanced TRAIL-mediated necroptosis occurs via the same signaling pathways (involving RIPK1/RIPK3/MLKL) as CHX-enhanced necroptosis. Importantly, consecutive treatment schedules of necroptosis and apoptosis in either combination revealed remarkable additive effects not reached by repetitive apoptotic treatments alone. Conclusions Taken together, our data demonstrate that HHT can replace harmful substances such as CHX to sensitize human cancer cells to TRAIL-induced necroptosis. Thus, HHT represents a promising enhancer in TRAIL-based necroptotic anti-cancer therapies also in patients.
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- 2015
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32. Biosynthetic incorporation of fluorinated amino acids into the nonribosomal peptide gramicidin S.
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Müll M, Pourmasoumi F, Wehrhan L, Nosovska O, Stephan P, Zeihe H, Vilotijevic I, Keller BG, and Kries H
- Abstract
Fluorine is a key element in medicinal chemistry, as it can significantly enhance the pharmacological properties of drugs. In this study, we aimed to biosynthetically produce fluorinated analogues of the antimicrobial cyclic decapeptide gramicidin S (GS). However, our results show that the A-domain of the NRPS module GrsA rejects 4-fluorinated analogues of its native substrate Phe due to an interrupted T-shaped aromatic interaction in the binding pocket. We demonstrate that GrsA mutant W239S improves the incorporation of 4-fluorinated Phe into GS both in vitro and in vivo . Our findings provide new insights into the behavior of NRPSs towards fluorinated amino acids and strategies for the engineered biosynthesis of fluorinated peptides., Competing Interests: There are no conflicts to declare., (This journal is © The Royal Society of Chemistry.)
- Published
- 2023
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