1. Characterization of the complete chloroplast genome of Carallia diplopetala (Rhizophoraceae).
- Author
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Wang, Renjie, Liao, Nanyan, Liu, Xiongsheng, Qin, Yi, Xiao, Yufei, Wang, Yong, and Huang, Ronglin
- Subjects
CHLOROPLAST DNA ,NUCLEOTIDE sequencing ,PSEUDOGENES - Abstract
Carallia diplopetala (Rhizophoraceae) is an important economic tree species narrowly distributed endemic to East Asia. In this study, We generate the complete chloroplast genome of C. diplopetala using next-generation sequencing technology, which is 162,052 bp in size and consists of a large single copy (LSC) of 89,556 bp and a small single copy (SSC) of 18,814 bp, separated a pair of inverted repeats (IRb and IRa) of 26,841 bp. The overall GC content is 36.4%. A total of 130 genes are annotated, including 83 protein-coding genes, 37 tRNAs, eight rRNAs and two pseudogenes (ψycf1 and ψrps19). The phylogenetic analysis indicated that C. diplopetala and C. brachiate formed a monophyletic clade with strong support and then sister to Pellacalyx yunnanensis. The plastome of C. diplopetala will provide informative genomic resources for further conservation applications. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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