1. Deep Learning Based Shear Wave Detection and Segmentation Tool for Use in Point-of-Care for Chronic Liver Disease Assessments.
- Author
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Honarvar M, Lobo J, Schneider C, Wolfe N, Gawrieh S, Loomba R, Ramji A, Hassanein T, Yoshida EM, Pang E, Curry MP, and Afdhal NH
- Subjects
- Humans, Liver Diseases diagnostic imaging, Point-of-Care Systems, Female, Male, Liver diagnostic imaging, Middle Aged, Algorithms, Chronic Disease, Adult, Fatty Liver diagnostic imaging, Software, Deep Learning, Elasticity Imaging Techniques methods
- Abstract
Objective: As metabolic dysfunction-associated steatotic liver disease (MASLD) becomes more prevalent worldwide, it is imperative to create more accurate technologies that make it easy to assess the liver in a point-of-care setting. The aim of this study is to test the performance of a new software tool implemented in Velacur (Sonic Incytes), a liver stiffness and ultrasound attenuation measurement device, on patients with MASLD. This tool employs a deep learning-based method to detect and segment shear waves in the liver tissue for subsequent analysis to improve tissue characterization for patient diagnosis., Methods: This new tool consists of a deep learning based algorithm, which was trained on 15,045 expert-segmented images from 103 patients, using a U-Net architecture. The algorithm was then tested on 4429 images from 36 volunteers and patients with MASLD. Test subjects were scanned at different clinics with different Velacur operators. Evaluation was performed on both individual images (image based) and averaged across all images collected from a patient (patient based). Ground truth was defined by expert segmentation of the shear waves within each image. For evaluation, sensitivity and specificity for correct wave detection in the image were calculated. For those images containing waves, the Dice coefficient was calculated. A prototype of the software tool was also implemented on Velacur and assessed by operators in real world settings., Results: The wave detection algorithm had a sensitivity of 81% and a specificity of 84%, with a Dice coefficient of 0.74 and 0.75 for image based and patient-based averages respectively. The implementation of this software tool as an overlay on the B-Mode ultrasound resulted in improved exam quality collected by operators., Conclusion: The shear wave algorithm performed well on a test set of volunteers and patients with metabolic dysfunction-associated steatotic liver disease. The addition of this software tool, implemented on the Velacur system, improved the quality of the liver assessments performed in a real world, point of care setting., Competing Interests: Conflict of interest M.H., J.L., and C.S. are employees of Sonic Incytes. N.W. is a consultant for Sonic Incytes. S.G.: Research grant support for Viking, Zydus, Sonic Incytes, DSM. R.L. Is the Co-founder of LipoNexus Inc. and was an investigator of clinical trials sponsored by Sonic Incytes. R.L. receives funding support from NCATS (5UL1TR001442), NIDDK (U01DK061734, U01DK130190, R01DK106419, R01DK121378, R01DK124318, P30DK120515), NHLBI (P01HL147835), John C Martin Foundation (RP124). A.R.: Advisor /consultant for Abbvie, Gilead, Intercept/ Advanz, Janssen, Novo-Nordisc. He was an investigator of clinical trials sponsored by Sonic Incytes. T.H.: Receives Grant/Research Support from AbbVie, Allergan, Amgen, Biolinq, Bristol-Myers Squibb, Cytodyn, Assembly, Astra Zeneca, Boehringer-Ingelheim, Bristol-Myers Squibb, CARA, DURECT Corporation, Enanta, Escient, Fractyl, Galectin, Gilead, Grifols, HepQuant, Intercept, Janssen, Merck, Mirum, Novartis, Novo Nordisk, Nucorion, Pfizer, Provepharm, Regeneron, Salix Pharmaceuticals, Sonic Incytes, Terns Pharmaceuticals, Valeant. He was an investigator of clinical trials sponsored by Sonic Incytes. E.Y.: Dr. Eric Yoshida is an investigator of clinical research and clinical trials sponsored by: Sonic Incytes Inc, Pfizer Inc, Gilead Inc, Intercept Inc, Madrigal Inc, Novodisc Inc, Genfit Inc. He has also received a research grant from Paladin Laboratories. EP: None. MC has received research support from CareDx, Intercept and Sonic Incytes and consults for International Healthcare and Pfizer. He was an investigator of clinical trials sponsored by Sonic Incytes. N.A. has received consulting fees from Gilead, Glaxo Smith Kline, Jannsen, Sonic Incytes, Precision Biosciences, Intercept Pharmaceuticals. He has stock in Allurion. He is director, Liver Institute for Education and Research. He was an investigator of clinical trials sponsored by Sonic Incytes., (Copyright © 2024 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2024
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