7 results on '"Frapard, Solène"'
Search Results
2. Challenges and considerations for single-cell and spatially resolved transcriptomics sample collection during spaceflight
- Author
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Overbey, Eliah G., Das, Saswati, Cope, Henry, Madrigal, Pedro, Andrusivova, Zaneta, Frapard, Solène, Klotz, Rebecca, Bezdan, Daniela, Gupta, Anjali, Scott, Ryan T., Park, Jiwoon, Chirko, Dawn, Galazka, Jonathan M., Costes, Sylvain V., Mason, Christopher E., Herranz, Raul, Szewczyk, Nathaniel J., Borg, Joseph, and Giacomello, Stefania
- Published
- 2022
- Full Text
- View/download PDF
3. Challenges and considerations for single-cell and spatially resolved transcriptomics sample collection during spaceflight
- Author
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European Space Agency, National Aeronautics and Space Administration (US), University of Nottingham, Swedish Research Council, Overbey, Eliah G. [0000-0002-2866-8294], Das, Saswati [0000-0002-4548-0066], Cope, Henry [0000-0002-4984-0567], Madrigal, Pedro [0000-0003-1959-8199], Andrusivova, Zaneta [0000-0002-4350-2524], Frapard, Solène [0000-0002-2649-7225], Klotz, Rebecca [0000-0001-7093-8086], Bezdan, Daniela [0000-0002-1203-8239], Park, Jiwoon [0000-0003-0045-1429], Chirko, Dawn [0000-0002-8879-3652], Galazka, Jonathan M. [0000-0002-4153-0249], Costes, Sylvain V. [0000-0002-8542-2389], Mason, Christopher E. [0000-0002-1850-1642], Herranz, Raúl [0000-0002-0246-9449], Szewczyk, Nathaniel [0000-0003-4425-9746], Borg, Joseph [0000-0002-0270-3098], Giacomello, Stefania [0000-0003-0738-1574], Overbey, Eliah G., Das, Saswati, Cope, Henry, Madrigal, Pedro, Andrusivova, Zaneta, Frapard, Solène, Klotz, Rebecca, Bezdan, Daniela, Gupta, Anjali, Scott, Ryan T., Park, Jiwoon, Chirko, Dawn, Galazka, Jonathan M., Costes, Sylvain V., Mason, Christopher E., Herranz, Raúl, Szewczyk, Nathaniel, Borg, Joseph, Giacomello, Stefania, European Space Agency, National Aeronautics and Space Administration (US), University of Nottingham, Swedish Research Council, Overbey, Eliah G. [0000-0002-2866-8294], Das, Saswati [0000-0002-4548-0066], Cope, Henry [0000-0002-4984-0567], Madrigal, Pedro [0000-0003-1959-8199], Andrusivova, Zaneta [0000-0002-4350-2524], Frapard, Solène [0000-0002-2649-7225], Klotz, Rebecca [0000-0001-7093-8086], Bezdan, Daniela [0000-0002-1203-8239], Park, Jiwoon [0000-0003-0045-1429], Chirko, Dawn [0000-0002-8879-3652], Galazka, Jonathan M. [0000-0002-4153-0249], Costes, Sylvain V. [0000-0002-8542-2389], Mason, Christopher E. [0000-0002-1850-1642], Herranz, Raúl [0000-0002-0246-9449], Szewczyk, Nathaniel [0000-0003-4425-9746], Borg, Joseph [0000-0002-0270-3098], Giacomello, Stefania [0000-0003-0738-1574], Overbey, Eliah G., Das, Saswati, Cope, Henry, Madrigal, Pedro, Andrusivova, Zaneta, Frapard, Solène, Klotz, Rebecca, Bezdan, Daniela, Gupta, Anjali, Scott, Ryan T., Park, Jiwoon, Chirko, Dawn, Galazka, Jonathan M., Costes, Sylvain V., Mason, Christopher E., Herranz, Raúl, Szewczyk, Nathaniel, Borg, Joseph, and Giacomello, Stefania
- Abstract
Single-cell RNA sequencing (scRNA-seq) and spatially resolved transcriptomics (SRT) have experienced rapid development in recent years. The findings of spaceflight-based scRNA-seq and SRT investigations are likely to improve our understanding of life in space and our comprehension of gene expression in various cell systems and tissue dynamics. However, compared to their Earth-based counterparts, gene expression experiments conducted in spaceflight have not experienced the same pace of development. Out of the hundreds of spaceflight gene expression datasets available, only a few used scRNA-seq and SRT. In this perspective piece, we explore the growing importance of scRNA-seq and SRT in space biology and discuss the challenges and considerations relevant to robust experimental design to enable growth of these methods in the field.
- Published
- 2022
4. Omics Technologies in Spaceflight: Challenges and Considerations for Applying Single-Cell and Spatially Resolved Gene Expression Technologies to Samples Collected In-Flight
- Author
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Overbey, Eliah, primary, Das, Saswati, additional, Cope, Henry, additional, Madrigal, Pedro, additional, Andrusivova, Zaneta, additional, Frapard, Solène, additional, Klotz, Rebecca, additional, Bezdan, Daniela, additional, Scott, Ryan, additional, Park, Jiwoon, additional, Chirko, Dawn, additional, Galazka, Jonathan Matthew, additional, Costes, Sylvain V., additional, Mason, Christopher E., additional, Herranz, Raul, additional, Szewczyk, Nathaniel J., additional, Borg, Joseph, additional, and Giacomello, Stefania, additional
- Published
- 2022
- Full Text
- View/download PDF
5. Challenges and considerations for single-cell and spatially resolved transcriptomics sample collection during spaceflight
- Author
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Eliah G. Overbey, Saswati Das, Henry Cope, Pedro Madrigal, Zaneta Andrusivova, Solène Frapard, Rebecca Klotz, Daniela Bezdan, Anjali Gupta, Ryan T. Scott, Jiwoon Park, Dawn Chirko, Jonathan M. Galazka, Sylvain V. Costes, Christopher E. Mason, Raul Herranz, Nathaniel J. Szewczyk, Joseph Borg, Stefania Giacomello, European Space Agency, National Aeronautics and Space Administration (US), University of Nottingham, Swedish Research Council, Overbey, Eliah G., Das, Saswati, Cope, Henry, Madrigal, Pedro, Andrusivova, Zaneta, Frapard, Solène, Klotz, Rebecca, Bezdan, Daniela, Park, Jiwoon, Chirko, Dawn, Galazka, Jonathan M., Costes, Sylvain V., Mason, Christopher E., Herranz, Raúl, Szewczyk, Nathaniel, Borg, Joseph, and Giacomello, Stefania
- Subjects
Single-cell ,RNA-sequencing ,Genetics ,Spatial ,Spatially resolved transcriptomics ,Radiology, Nuclear Medicine and imaging ,Spaceflight ,Transcriptomics ,Biochemistry, Genetics and Molecular Biology (miscellaneous) ,Biochemistry ,Computer Science Applications ,Biotechnology - Abstract
15 p.-2 fig.-3 tab., Single-cell RNA sequencing (scRNA-seq) and spatially resolved transcriptomics (SRT) have experienced rapid development in recent years. The findings of spaceflight-based scRNA-seq and SRT investigations are likely to improve our understanding of life in space and our comprehension of gene expression in various cell systems and tissue dynamics. However, compared to their Earth-based counterparts, gene expression experiments conducted in spaceflight have not experienced the same pace of development. Out of the hundreds of spaceflight gene expression datasets available, only a few used scRNA-seq and SRT. In this perspective piece, we explore the growing importance of scRNA-seq and SRT in space biology and discuss the challenges and considerations relevant to robust experimental design to enable growth of these methods in the field., H.C., P.M., D.B., R.H., N.J.S., J.B., and S.G. are members of the ESA Space Omics Topical Team, funded by the ESA grant/contract 4000131202/20/NL/PG/pt “Space Omics: Towards an integrated ESA/NASA – omics database for spaceflight and ground facilities experiments” awarded to R.H., which was the main funding source for this work. H.C. is also supported by the Horizon Centre for Doctoral Training at the University of Nottingham (UKRI grant no. EP/S023305/1). S.G. is supported by the Swedish Research Council VR grant 2020-04864. E.G.O. is supported through NASA Postdoctoral Fellowship 80NSSC21K0316.
- Published
- 2022
6. Standalone single- and bi-layered human skin 3D models supported by recombinant silk feature native spatial organization.
- Author
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Gkouma S, Bhalla N, Frapard S, Jönsson A, Gürbüz H, Dogan AA, Giacomello S, Duvfa M, Ståhl PL, Widhe M, and Hedhammar M
- Subjects
- Humans, Skin, Artificial, Extracellular Matrix metabolism, Extracellular Matrix chemistry, Tissue Engineering, Models, Biological, Tissue Scaffolds chemistry, Keratinocytes cytology, Keratinocytes metabolism, Animals, Silk chemistry, Skin metabolism, Skin cytology, Recombinant Proteins metabolism, Recombinant Proteins chemistry
- Abstract
Physiologically relevant human skin models that include key skin cell types can be used for in vitro drug testing, skin pathology studies, or clinical applications such as skin grafts. However, there is still no golden standard for such a model. We investigated the potential of a recombinant functionalized spider silk protein, FN-silk, for the construction of a dermal, an epidermal, and a bilayered skin equivalent (BSE). Specifically, two formats of FN-silk (i.e. 3D network and nanomembrane) were evaluated. The 3D network was used as an elastic ECM-like support for the dermis, and the thin, permeable nanomembrane was used as a basement membrane to support the epidermal epithelium. Immunofluorescence microscopy and spatially resolved transcriptomics analysis demonstrated the secretion of key ECM components and the formation of microvascular-like structures. Furthermore, the epidermal layer exhibited clear stratification and the formation of a cornified layer, resulting in a tight physiologic epithelial barrier. Our findings indicate that the presented FN-silk-based skin models can be proposed as physiologically relevant standalone epidermal or dermal models, as well as a combined BSE., (Creative Commons Attribution license.)
- Published
- 2024
- Full Text
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7. Claustrum and dorsal endopiriform cortex complex cell-identity is determined by Nurr1 and regulates hallucinogenic-like states in mice.
- Author
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Mantas I, Flais I, Masarapu Y, Ionescu T, Frapard S, Jung F, Le Merre P, Saarinen M, Tiklova K, Salmani BY, Gillberg L, Zhang X, Chergui K, Carlén M, Giacomello S, Hengerer B, Perlmann T, and Svenningsson P
- Subjects
- Animals, Mice, Male, Mice, Knockout, Mice, Inbred C57BL, Prefrontal Cortex metabolism, Prefrontal Cortex physiology, Sensorimotor Cortex metabolism, Sensorimotor Cortex physiology, Nuclear Receptor Subfamily 4, Group A, Member 2 metabolism, Nuclear Receptor Subfamily 4, Group A, Member 2 genetics, Hallucinogens pharmacology, Claustrum metabolism, Neurons metabolism
- Abstract
The Claustrum/dorsal endopiriform cortex complex (CLA) is an enigmatic brain region with extensive glutamatergic projections to multiple cortical areas. The transcription factor Nurr1 is highly expressed in the CLA, but its role in this region is not understood. By using conditional gene-targeted mice, we show that Nurr1 is a crucial regulator of CLA neuron identity. Although CLA neurons remain intact in the absence of Nurr1, the distinctive gene expression pattern in the CLA is abolished. CLA has been hypothesized to control hallucinations, but little is known of how the CLA responds to hallucinogens. After the deletion of Nurr1 in the CLA, both hallucinogen receptor expression and signaling are lost. Furthermore, functional ultrasound and Neuropixel electrophysiological recordings revealed that the hallucinogenic-receptor agonists' effects on functional connectivity between prefrontal and sensorimotor cortices are altered in Nurr1-ablated mice. Our findings suggest that Nurr1-targeted strategies provide additional avenues for functional studies of the CLA., (© 2024. The Author(s).)
- Published
- 2024
- Full Text
- View/download PDF
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