18 results on '"Huhn K"'
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2. Characterisation of weak layers, physical controls on their global distribution and their role in submarine landslide formation
- Author
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Gatter, R., Clare, M.A., Kuhlmann, J., and Huhn, K.
- Published
- 2021
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3. Flank collapse, sediment failure and flow-transition: the multi-stage deposition of a volcanic sector collapse offshore Montserrat, Lesser Antilles
- Author
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Kühn, Michel, Berndt, Christian, Krastel, Sebastian, Kutterolf, Steffen, Karstens, Jens, Watt, S. F. L., Hornbach, M., Huhn, K., Freudenthal, K., Kühn, Michel, Berndt, Christian, Krastel, Sebastian, Kutterolf, Steffen, Karstens, Jens, Watt, S. F. L., Hornbach, M., Huhn, K., and Freudenthal, K.
- Published
- 2023
4. Episodic movement of a submarine landslide complex driven by dynamic loading during earthquakes
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Carey, J. M., Mountjoy, J. J., Crutchley, Gareth J., Petley, D. N., Holden, C. F., Kaneko, Y., Huhn, K., Carey, J. M., Mountjoy, J. J., Crutchley, Gareth J., Petley, D. N., Holden, C. F., Kaneko, Y., and Huhn, K.
- Abstract
Although subaqueous slopes on active continental margins are subject to a variety of failure styles, their movement mechanisms during earthquakes remain poorly constrained. A primary explanation is that few submarine landslides have been directly sampled for detailed investigation. We have conducted a series of dynamic shear experiments on samples recovered from the base of the Tuaheni Landslide Complex, located off the east coast of the North Island of New Zealand, to explore its behaviour during earthquakes. Our experiments suggest that whilst the basal landslide sediments can be prone to liquefaction in certain conditions, this is not a likely failure mechanism at the stress states operating in the low angled shear zone at the base of this landslide system. Instead, episodic landslide movement can occur through basal sliding when pore water pressures increase sufficiently to lower the shear zone effective stress to the material failure envelope. These low effective stress conditions are most likely to be reached during earthquakes that produce large amplitude, long duration ground shaking. The observed behaviour provides a credible mechanism through which subaqueous landslides moving on low angled shear zones in similar materials may be subject to episodic movement during earthquakes without undergoing catastrophic failure.
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- 2022
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5. Investigating the basal shear zone of the submarine Tuaheni Landslide Complex, New Zealand: a core‐log‐seismic integration study
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Crutchley, Gareth J., Elger, Judith, Kuhlmann, J., Mountjoy, J.J., Orpin, A., Georgiopoulou, A., Carey, J., Dugan, B., Cardona, S., Han, S., Cook, A., Screaton, E.J., Pecher, I.A., Barnes, P., Huhn, K., Crutchley, Gareth J., Elger, Judith, Kuhlmann, J., Mountjoy, J.J., Orpin, A., Georgiopoulou, A., Carey, J., Dugan, B., Cardona, S., Han, S., Cook, A., Screaton, E.J., Pecher, I.A., Barnes, P., and Huhn, K.
- Abstract
Although submarine landslides have been studied for decades, a persistent challenge is the integration of diverse geoscientific datasets to characterise failure processes. We present a core-log-seismic integration study of the Tuaheni Landslide Complex to investigate intact sediments beneath the undeformed seafloor as well as post-failure landslide deposits. Beneath the undeformed seafloor are coherent reflections underlain by a weakly-reflective and chaotic seismic unit. This chaotic unit is characterised by variable shear strength that correlates with density fluctuations. The basal shear zone of the Tuaheni landslide likely exploited one (or more) of the low shear strength intervals. Within landslide deposits is a widespread “Intra-debris Reflector”, previously interpreted as the landslide’s basal shear zone. This reflector is a subtle impedance drop around the boundary between upper and lower landslide units. However, there is no pronounced shear strength change across this horizon. Rather, there is a pronounced reduction in shear strength ∼10-15 m above the Intra-debris Reflector that presumably represents an induced weak layer that developed during failure. Free gas accumulates beneath some regions of the landslide and is widespread deeper in the sedimentary sequence, suggesting that free gas may have played a role in pre-conditioning the slope to failure. Additional pre-conditioning or failure triggers could have been seismic shaking and associated transient fluid pressure. Our study underscores the importance of detailed core-log-seismic integration approaches for investigating basal shear zone development in submarine landslides.
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- 2022
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6. Investigating the Basal Shear Zone of the Submarine Tuaheni Landslide Complex, New Zealand: A Core‐Log‐Seismic Integration Study
- Author
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Crutchley, G. J., primary, Elger, J., additional, Kuhlmann, J., additional, Mountjoy, J. J., additional, Orpin, A., additional, Georgiopoulou, A., additional, Carey, J., additional, Dugan, B., additional, Cardona, S., additional, Han, S., additional, Cook, A., additional, Screaton, E. J., additional, Pecher, I. A., additional, Barnes, P., additional, and Huhn, K., additional
- Published
- 2022
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7. Investigating the basal shear zone of the submarine Tuaheni Landslide Complex, New Zealand: a core‐log‐seismic integration study
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G. J. Crutchley, J. Elger, J. Kuhlmann, J. J. Mountjoy, A. Orpin, A. Georgiopoulou, J. Carey, B. Dugan, S. Cardona, S. Han, A. Cook, E. J. Screaton, I. A. Pecher, P. Barnes, K. Huhn, Elger, J., 1 GEOMAR Helmholtz Centre for Ocean Research Kiel Kiel Germany, Kuhlmann, J., 2 Centre for Marine Environmental Sciences (MARUM) University of Bremen Bremen Germany, Mountjoy, J. J., 3 National Institute of Water and Atmospheric Research (NIWA) Wellington New Zealand, Orpin, A., Georgiopoulou, A., 4 School of Environment and Technology University of Brighton Brighton UK, Carey, J., 5 GNS Science Lower Hutt New Zealand, Dugan, B., 6 Colorado School of Mines Golden CO USA, Cardona, S., Han, S., 7 Jackson School of Geosciences The University of Texas at Austin Austin TX USA, Cook, A., 8 Ohio State University Columbus OH USA, Screaton, E. J., 9 University of Florida Gainesville FL USA, Pecher, I. A., 10 School of Environment University of Auckland Auckland New Zealand, Barnes, P., and Huhn, K.
- Subjects
Geophysics ,010504 meteorology & atmospheric sciences ,Space and Planetary Science ,Geochemistry and Petrology ,ddc:551 ,Earth and Planetary Sciences (miscellaneous) ,14. Life underwater ,010502 geochemistry & geophysics ,01 natural sciences ,ddc:622.15 ,0105 earth and related environmental sciences - Abstract
Although submarine landslides have been studied for decades, a persistent challenge is the integration of diverse geoscientific datasets to characterize failure processes. We present a core‐log‐seismic integration study of the Tuaheni Landslide Complex to investigate intact sediments beneath the undeformed seafloor as well as post‐failure landslide deposits. Beneath the undeformed seafloor are coherent reflections underlain by a weakly‐reflective and chaotic seismic unit. This chaotic unit is characterized by variable shear strength that correlates with density fluctuations. The basal shear zone of the Tuaheni landslide likely exploited one (or more) of the low shear strength intervals. Within the landslide deposits is a widespread “Intra‐debris Reflector”, previously interpreted as the landslide's basal shear zone. This reflector is a subtle impedance drop around the boundary between upper and lower landslide units. However, there is no pronounced shear strength change across this horizon. Rather, there is a pronounced reduction in shear strength ∼10–15 m above the Intra‐debris Reflector that presumably represents an induced weak layer that developed during failure. Free gas accumulates beneath some regions of the landslide and is widespread deeper in the sedimentary sequence, suggesting that free gas may have played a role in pre‐conditioning the slope to failure. Additional pre‐conditioning or failure triggers could have been seismic shaking and associated transient fluid pressure. Our study underscores the importance of detailed core‐log‐seismic integration approaches for investigating basal shear zone development in submarine landslides., Plain Language Summary: Submarine landslides move enormous amounts of sediment across the seafloor and have the potential to generate damaging tsunamis. To understand how submarine landslides develop, we need to be able to image and sample beneath the seafloor in regions where landslides have occurred. To image beneath the seafloor we generate sound waves in the ocean and record reflections from those waves, enabling us to produce “seismic images” of sediment layers and structures beneath the seafloor. We then use scientific drilling to sample the sediment layers and measure physical properties. In this study, we combine seismic images and drilling results to investigate a submarine landslide east of New Zealand's North Island. Drilling next to the landslide revealed a ∼25 m‐thick layer of sediment (from ∼75–95 m below the seafloor) that has strong variations in sediment strength and density. We infer that intervals of relatively low strength within this layer developed into the main sliding surface of the landslide. Additionally, results from within the landslide suggest that the process of landslide emplacement has induced a zone of weak sediments closer to the seafloor. Our study demonstrates how combining seismic images and drilling data helps to understand submarine landslide processes., Key Points: We integrate scientific drilling data with seismic reflection data to investigate the submarine Tuaheni Landslide Complex. Basal shear zone of the landslide likely exploited a relatively low shear strength interval within an older (buried) mass transport deposit. Landslide emplacement seems to have induced an additional weak zone that is shallower than the interpreted base of the landslide deposit., Marsden Fund (Royal Society of New Zealand Marsden Fund) http://dx.doi.org/10.13039/501100009193, European Consortium for Ocean Research Drilling, International Ocean Drilling Program, Science Support Program, New Zealand Ministry for Business Innovation and Employment, Deutsche Forschungsgemeinschaft (DFG) http://dx.doi.org/10.13039/501100001659, https://doi.pangaea.de/10.1594/PANGAEA.928073
- Published
- 2022
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8. Exploration of Student Experiences and Perceptions of Self and Peer: Implications for Tailoring Supports.
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Huhn K, Costello E, Healey WE, Hilliard MJ, Maring J, and Plack M
- Abstract
Introduction: Doctor of Physical Therapy (DPT) students have reported learning new behaviors, enhanced self-awareness, and personal and professional growth during their first year of DPT school. The purpose of this study was to explore in greater depth, through semistructured interviews, the student perceptions of self-identity and social identity., Subjects: Seventeen early second-year DPT students from 3 universities., Methods: This investigation is an extension of a larger multisite study. Qualitative interviews were employed to enable the use of a constructivist lens to explore the importance of personal context in participants' experiences during the first year of DPT school., Results: Students across programs shared similar characteristics and experiences. Three themes emerged: DPT students share common perceptions of themselves and classmates; sociocultural experiences shaped their actions and perceptions of self; and students recognized the need to change to be successful. The voices of the older second-career students and racially minoritized students were uniquely different from other participants., Discussion and Conclusion: Doctor of Physical Therapy student experiences are similar across programs except for older students and racially minoritized students. Early professional identity formation was noted as well. A richer understanding of the personal characteristics, influential sociocultural factors, and student perceptions of self and classmates could enable educators to customize supports and educational strategies to help students understand the role their past and present experiences play in shaping their professional identities., Competing Interests: The authors declare no conflicts of interest., (Copyright © 2024 Academy of Physical Therapy Education, APTA.)
- Published
- 2024
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9. Personal characteristic differences among Doctor of Physical Therapy students with unique sociodemographic factors.
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Reynolds K, Horn M, Huhn K, and George SZ
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- Humans, Female, Male, Prospective Studies, Adult, Resilience, Psychological, Young Adult, Anxiety, Sociodemographic Factors, Students, Medical psychology, Sex Factors, Surveys and Questionnaires, Physical Therapy Specialty education, Stress, Psychological, Self Efficacy
- Abstract
Background: The Association of American Medical Colleges suggests an Experiences-Attributes-Metrics framework for holistic review, but there is minimal research on demographic and personal characteristic attributes and the interplay between these Attributes subcategories. Understanding how personal attributes may vary among students considered represented and those considered underrepresented in one or more categories is critical to avoid unintentionally perpetuating practices that favor represented groups. This study explored differences in six personal characteristics either consistently related to academic performance or deemed positive professional traits based on diversity characteristics (categories of underrepresentation), age, and sex., Methods: Three cohorts of first-year Doctor of Physical Therapy students at a single institution were invited to participate in this prospective, observational study. Participants completed six surveys: PROMIS® General Self-efficacy, PROMIS® Anxiety, 12-item Grit Scale, Perceived Stress Scale-10 (PSS-10), Brief Resilience Scale (BRS), and PROMIS® Positive Affect. T-tests and ANOVAs (or nonparametric equivalents) were used to examine differences in these measures by number of diversity characteristics, age, and sex. Multivariate linear regression was used to determine if diversity characteristics explained additional variance in each of the personal attribute scores after controlling for age and sex., Results: One Hundred and Forty Five students participated (80.7% female, 77.9% < 25 years old, 51% 0 diversity characteristics). Students with more diversity characteristics and males reported higher self-efficacy and resilience (p's < 0.05). Females reported higher anxiety (p's < 0.01). Diversity characteristics explained additional variance in self-efficacy (3.3%, p = 0.02) and resilience (2.5%, p = 0.05) after controlling for age and sex. Grit, perceived stress, and positive affect did not show any group differences., Conclusions: Underrepresented students demonstrated higher self-efficacy and resilience than their represented peers, qualities that may be important to overcome challenges prior to and during graduate school. Males exhibited higher self-efficacy and resilience, but lower anxiety than females which is generally consistent across higher education. Grit, perceived stress, and positive affect were similar across all students and may be less useful to create a diverse learning environment. Further studies should investigate differences in attributes among admitted and unadmitted students and the relationship to future performance for admitted students., (© 2024. The Author(s).)
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- 2024
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10. The Role of Movement in Physical Therapist Clinical Reasoning.
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Christensen N, Black L, Gilliland S, Huhn K, and Wainwright S
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- Humans, Child, Problem Solving, Clinical Reasoning, Physical Therapists
- Abstract
Objective: The purpose of this study was to explore how physical therapists use movement as a component of their clinical reasoning. Additionally, this research explored whether movement as a component of clinical reasoning aligns with the proposed signature pedagogy for physical therapist education, human body as teacher., Methods: The study utilized qualitative, descriptive methods in a multiple case studies design (each practice setting represented a different case for analysis purposes) with cross-case comparisons. Researchers conducted 8 focus groups across practice settings including acute care, inpatient neurological, outpatient orthopedics, and pediatrics. Each focus group had 4 to 6 participants. Through an iterative, interactive process of coding and discussion among all researchers, a final coding scheme was developed., Results: Through exploration of the research aims, 3 themes emerged from the data. These primary themes are: (1) movement drives clinical reasoning to optimize function; (2) reasoning about movement is multisensory and embodied; and (3) reasoning about movement relies on communication., Conclusions: This research supports a description of movement as the lens used by physical therapists in clinical reasoning and the integral role of movement in clinical reasoning and in learning from and through movement of the human body while learning from clinical reasoning experiences in practice., Impact: As the understanding of the ways physical therapists use and learn from movement in clinical reasoning and practice continues to emerge, it is important to continue exploring ways to best make this expanded, embodied conception of clinical reasoning explicit in the education of future generations of physical therapists., (© The Author(s) 2023. Published by Oxford University Press on behalf of the American Physical Therapy Association. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)
- Published
- 2023
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11. Influence of Residual Quadrupolar Interaction on Quantitative Sodium Brain Magnetic Resonance Imaging of Patients With Multiple Sclerosis.
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Wilferth T, Mennecke A, Huhn K, Uder M, Doerfler A, Schmidt M, and Nagel AM
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- Humans, Brain diagnostic imaging, Brain pathology, Magnetic Resonance Imaging methods, Sodium analysis, Brain Chemistry, Multiple Sclerosis diagnostic imaging, Multiple Sclerosis pathology
- Abstract
Objectives: The purpose of this work was to evaluate the influence of residual quadrupolar interaction on the determination of human brain apparent tissue sodium concentrations (aTSCs) using quantitative sodium magnetic resonance imaging ( 23 Na MRI) in healthy controls (HCs) and patients with multiple sclerosis (MS). Especially, it was investigated if the more detailed examination of residual quadrupolar interaction effects enables further analysis of the observed 23 Na MRI signal increase in MS patients., Materials and Methods: 23 Na MRI with a 7 T MR system was performed on 21 HC and 50 MS patients covering all MS subtypes (25 patients with relapsing-remitting MS, 14 patients with secondary progressive MS, and 11 patients with primary progressive MS) using 2 different 23 Na pulse sequences for quantification: a commonly used standard sequence (aTSC Std ) as well as a sequence with shorter excitation pulse length and lower flip angle for minimizing signal loss resulting from residual quadrupolar interactions (aTSC SP ). Apparent tissue sodium concentration was determined using the same postprocessing pipeline including correction of the receive profile of the radiofrequency coil, partial volume correction, and relaxation correction. Spin dynamic simulations of spin-3/2 nuclei were performed to aid in the understanding of the measurement results and to get deeper insight in the underlying mechanisms., Results: In normal-appearing white matter (NAWM) of HC and all MS subtypes, the aTSC SP values were approximately 20% higher than the aTSC Std values ( P < 0.001). In addition, the ratio aTSC SP /aTSC Std was significantly higher in NAWM than in normal-appearing gray matter (NAGM) for all subject cohorts ( P < 0.002). In NAWM, aTSC Std values were significantly higher in primary progressive MS compared with HC ( P = 0.01) as well as relapsing-remitting MS ( P = 0.03). However, in contrast, no significant differences between the subject cohorts were found for aTSC SP . Spin simulations assuming the occurrence of residual quadrupolar interaction in NAWM were in good accordance with the measurement results, in particular, the ratio aTSC SP /aTSC Std in NAWM and NAGM., Conclusions: Our results showed that residual quadrupolar interactions in white matter regions of the human brain have an influence on aTSC quantification and therefore must be considered, especially in pathologies with expected microstructural changes such as loss of myelin in MS. Furthermore, the more detailed examination of residual quadrupolar interactions may lead to a better understanding of the pathologies themselves., Competing Interests: Conflicts of interest and sources of funding: none declared., (Copyright © 2023 The Author(s). Published by Wolters Kluwer Health, Inc.)
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- 2023
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12. The clinical phenotype with gastrostomy and abdominal wall infection in a pediatric patient with Takenouchi-Kosaki syndrome due to a heterozygous c.191A > G (p.Tyr64Cys) variant in CDC42 : a case report.
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Szczawińska-Popłonyk A, Popłonyk N, Badura-Stronka M, Juengling J, Huhn K, Biskup S, Bancerz B, and Walkowiak J
- Abstract
The CDC42 (cell division cycle homolog 42) gene product, Cdc42 belongs to the Rho GTPase family which plays a pivotal role in the regulation of multiple cellular functions, including cell cycle progression, motility, migration, proliferation, transcription activation, and reactive oxygen species production. The Cdc42 molecule controls various tissue-specific functional pathways underpinning organogenesis as well as developmental integration of the hematopoietic and immune systems. Heterozygous c.191A>G (p.Tyr64Cys) pathogenic variants in CDC42 cause Takenouchi-Kosaki syndrome characterized by a spectrum of phenotypic features comprising psychomotor developmental delay, sensorineural hearing loss, growth retardation, facial dysmorphism, cardiovascular and urinary tract malformations, camptodactyly, accompanied by thrombocytopenia and immunodeficiency of variable degree. Herein, we report a pediatric patient with the Takenouchi-Kosaki syndrome due to a heterozygous p.Tyr64Cys variant in CDC42 manifesting as a congenital malformation complex accompanied by macrothrombocytopenia, poor specific antibody response, B and T cell immunodeficiency, and low serum immunoglobulin A level. We also suggst that feeding disorders, malnutrition, and a gastrointestinal infection could be a part of the phenotypic characteristics of Takenouchi-Kosaki syndrome supporting the hypothesis of immune dysregulation and systemic inflammation occurring in the p.Tyr64Cys variant in CDC42., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Szczawińska-Popłonyk, Popłonyk, Badura-Stronka, Juengling, Huhn, Biskup, Bancerz and Walkowiak.)
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- 2023
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13. Transformative Learning Emerging From Challenges First-Year Students Experienced.
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Plack MM, Hilliard MJ, Costello E, Huhn K, Maring J, and Healey WE
- Subjects
- Humans, Narration, Students, Faculty
- Abstract
Introduction: Doctor of physical therapy (PT) (DPT) programs are rigorous, and students report facing overwhelming challenges. Faculty may not be cognizant of the extent of these challenges and miss opportunities to support student learning. The purpose of this article is to describe factors affecting student coping abilities and the lessons they learned from managing their self-identified challenges., Review of Literature: Given the growing body of evidence surrounding mental health issues in DPT students, educators are exploring ways to support student well-being and promote their professional development., Subjects: This study is a component of a larger multisite study of first-year DPT students from 3 private universities., Methods: Participants submitted written narratives in response to a critical incident questionnaire designed to better understand first-year challenges. Responses were deidentified, researchers were blinded to participation, and confidentiality was maintained throughout. A consensus-driven interpretivist approach to qualitative data analysis was used. Strategies to ensure trustworthiness included triangulation of researchers, peer review, prolonged engagement, and use of thick rich descriptions., Results: Seventy responses were analyzed. Two major themes are presented: (1) students described factors internal and external to the learning environment that inhibited and facilitated their ability to cope with challenges and (2) students shared academic successes and lessons learned from overcoming challenges, including the development of new behaviors, enhanced self-awareness, and personal and professional growth., Discussion and Conclusion: Building on previous work, analysis of the lived experiences of first-year DPT students revealed a process of transformational learning through challenge. This process highlights the importance of recognizing and supporting the significant incidental learning that occurs in our students during their journey through PT school. Faculty focusing solely on content knowledge, skills, and even critical thinking may not recognize and support the incidental learning occurring and may be missing significant transformational learning opportunities., Competing Interests: The authors declare no conflicts of interest., (Copyright © 2022 Academy of Physical Therapy Education, APTA.)
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- 2023
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14. Breastfeeding in Mothers with Multiple Sclerosis: The German Experience.
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Aigner S, Huhn K, Cepek L, Hellwig K, Nickel FT, and Bayas A
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- Female, Humans, Pregnancy, Mothers education, Weaning, Parturition, Breast Feeding, Multiple Sclerosis epidemiology
- Abstract
Background: Many female people with multiple sclerosis (pwMS) are in childbearing age; however, only few data exist about the situation of breastfeeding in pwMS. Objective: Our study analyzed breastfeeding rate and duration, reasons for weaning, and the impact of disease severity on successful breastfeeding in pwMS. Methods: The study included pwMS giving birth within 3 years before study participation. Data were collected by structured questionnaire. Results: Compared to published data, we found a significant difference ( p = 0.0007) between the nursing rate in the general population (96.6%) and females with MS (85.9%). However, a higher rate of exclusive breastfeeding could be observed in our study population for 5-6 months in 40.6% of pwMS versus 9% for 6 months in the general population. In contrast, total breastfeeding duration in our study population was shorter (18.8% for 11-12 months) than in the general population (41.1% for 12 months). Reasons for weaning were predominantly (68.7%) related to breastfeeding barriers based on MS. No significant impact of prepartum or postpartum education on the breastfeeding rate could be observed. Prepartum relapse rate and prepartum disease-modifying drugs had no effect on breastfeeding success. Conclusion: Our survey provides an insight into the situation of breastfeeding in pwMS in Germany.
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- 2023
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15. Quantitative 7T sodium magnetic resonance imaging of the human brain using a 32-channel phased-array head coil: Application to patients with secondary progressive multiple sclerosis.
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Wilferth T, Mennecke A, Gast LV, Lachner S, Müller M, Rothhammer V, Huhn K, Uder M, Doerfler A, Nagel AM, and Schmidt M
- Subjects
- Humans, Sodium, Reproducibility of Results, Magnetic Resonance Imaging methods, Brain diagnostic imaging, Brain pathology, Biomarkers, Multiple Sclerosis, Chronic Progressive diagnostic imaging, Multiple Sclerosis, Chronic Progressive pathology, Multiple Sclerosis diagnostic imaging, Multiple Sclerosis pathology
- Abstract
Apparent tissue sodium concentrations (aTSCs) determined by
23 Na brain magnetic resonance imaging (MRI) have the potential to serve as a biomarker in pathologies such as multiple sclerosis (MS). However, the quantification is hindered by the intrinsically low signal-to-noise ratio of23 Na MRI. The purpose of this study was to improve the accuracy and reliability of quantitative23 Na brain MRI by implementing a dedicated postprocessing pipeline and to evaluate the applicability of the developed approach for the examination of MS patients.23 Na brain MRI measurements of 13 healthy volunteers and 17 patients with secondary progressive multiple sclerosis (SPMS) were performed at 7 T using a dual-tuned23 Na/1 H birdcage coil with a receive-only 32-channel phased array. The aTSC values were determined for normal appearing white matter (NAWM) and normal appearing gray matter (NAGM) in healthy subjects and SPMS patients. Signal intensities were normalized using the mean cerebrospinal fluid (CSF) sodium concentration determined in 37 separate patients receiving a spinal tap for routine diagnostic purposes. Five volunteers underwent MRI examinations three times in a row to assess repeatability. Coefficients of variation (CoVs) were used to quantify the repeatability of the proposed method. aTSC values were compared regarding brain regions and subject cohort using the paired-samples Wilcoxon rank-sum test. Laboratory CSF sodium concentration did not differ significantly between patients without and with MS (p = 0.42). The proposed quantification workflow for23 Na MRI was highly repeatable with CoVs averaged over all five volunteers of 1.9% ± 0.9% for NAWM and 2.2% ± 1.6% for NAGM. Average NAWM aTSC was significantly higher in patients with SPMS compared with the control group (p = 0.009). Average NAGM aTSC did not differ significantly between healthy volunteers and MS patients (p = 0.98). The proposed postprocessing pipeline shows high repeatability and the results can serve as a baseline for further studies establishing23 Na brain MRI as a biomarker in diseases such as MS., (© 2022 The Authors. NMR in Biomedicine published by John Wiley & Sons Ltd.)- Published
- 2022
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16. N-terminal domain of ARF-GEF GNOM prevents heterodimerization with functionally divergent GNL1 in Arabidopsis.
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Brumm S, Singh MK, Kriechbaum C, Richter S, Huhn K, Kucera T, Baumann S, Wolters H, Takada S, and Jürgens G
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- Dimerization, Guanine Nucleotide Exchange Factors genetics, Guanine Nucleotide Exchange Factors metabolism, Golgi Apparatus metabolism, Peptidylprolyl Isomerase metabolism, Arabidopsis genetics, Arabidopsis metabolism, Arabidopsis Proteins genetics, Arabidopsis Proteins metabolism
- Abstract
Evolutionary change following gene duplication can lead to functionally divergent paralogous proteins. If comprising identical subunits their random assortment would also form potentially detrimental heteromeric proteins. In Arabidopsis, the ARF GTPase guanine-nucleotide exchange factor GNOM is essential for polar recycling of auxin-efflux transporter PIN1 from endosomes to the basal plasma membrane whereas its paralog GNL1 mediates retrograde Golgi-endoplasmic reticulum traffic. Here we show that both GNOM and GNL1 form homodimers but no heterodimers. To assess the biological significance of this, we generated transgenic plants expressing engineered heterodimer-compatible GNOM variants. Those plants showed developmental defects such as the failure to produce lateral roots. To identify mechanisms underlying heterodimer prevention, we analyzed interactions of the N-terminal dimerization and cyclophilin-binding (DCB) domain. Each DCB domain interacted with the complementary fragment (ΔDCB) both of their own and of the paralogous protein. However, only DCB
GNOM interacted with itself whereas DCBGNL1 failed to interact with itself and with DCBGNOM . GNOM variants in which the DCB domain was removed or replaced by DCBGNL1 revealed a role for DCB-DCB interaction in the prevention of GNOM-GNL1 heterodimers whereas DCB-ΔDCB interaction was essential for dimer formation and GNOM function. Our data suggest a model of early DCB-DCB interaction that facilitates GNOM homodimer formation, indirectly precluding formation of detrimental heterodimers., (© 2022 The Authors. The Plant Journal published by Society for Experimental Biology and John Wiley & Sons Ltd.)- Published
- 2022
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17. Direct imaging of white matter ultrashort T 2 ∗ components at 7 Tesla.
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Müller M, Egger N, Sommer S, Wilferth T, Meixner CR, Laun FB, Mennecke A, Schmidt M, Huhn K, Rothhammer V, Uder M, Dörfler A, and Nagel AM
- Subjects
- Brain diagnostic imaging, Brain pathology, Humans, Magnetic Resonance Imaging methods, Myelin Sheath pathology, Phantoms, Imaging, Multiple Sclerosis diagnostic imaging, Multiple Sclerosis pathology, White Matter diagnostic imaging, White Matter pathology
- Abstract
Purpose: To demonstrate direct imaging of the white matter ultrashort T
2 ∗ components at 7 Tesla using inversion recovery (IR)-enhanced ultrashort echo time (UTE) MRI. To investigate its characteristics, potentials and limitations, and to establish a clinical protocol., Material and Methods: The IR UTE technique suppresses long T2 ∗ signals within white matter by using adiabatic inversion in combination with dual-echo difference imaging. Artifacts arising at 7 T from long T2 ∗ scalp fat components were reduced by frequency shifting the IR pulse such that those frequencies were inverted likewise. For 8 healthy volunteers, the T2 ∗ relaxation times of white matter were then quantified. In 20 healthy volunteers, the UTE difference and fraction contrast were evaluated. Finally, in 6 patients with multiple sclerosis (MS), the performance of the technique was assessed., Results: A frequency shift of -1.2 ppm of the IR pulse (i.e. towards the fat frequency) provided a good suppression of artifacts. With this, an ultrashort compartment of (68 ± 6) % with a T2 ∗ time of (147 ± 58) μs was quantified with a chemical shift of (-3.6 ± 0.5) ppm from water. Within healthy volunteers' white matter, a stable ultrashort T2 ∗ fraction contrast was calculated. For the MS patients, a significant fraction reduction in the identified lesions as well as in the normal-appearing white matter was observed., Conclusions: The quantification results indicate that the observed ultrashort components arise primarily from myelin tissue. Direct IR UTE imaging of the white matter ultrashort T2 ∗ components is thus feasible at 7 T with high quantitative inter-subject repeatability and good detection of signal loss in MS., (Copyright © 2021 Elsevier Inc. All rights reserved.)- Published
- 2022
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18. Longitudinal Sodium MRI of Multiple Sclerosis Lesions: Is there Added Value of Sodium Inversion Recovery MRI.
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Mennecke AB, Nagel AM, Huhn K, Linker RA, Schmidt M, Rothhammer V, Wilferth T, Linz P, Wegmann J, Eisenhut F, Engelhorn T, and Doerfler A
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- Humans, Magnetic Resonance Imaging, Prospective Studies, Multiple Sclerosis diagnostic imaging, Sodium
- Abstract
Background: Sodium enhancement has been demonstrated in multiple sclerosis (MS) lesions., Purpose: To investigate sodium MRI with and without an inversion recovery pulse in acute MS lesions in an MS relapse and during recovery., Study Type: Prospective., Subjects: Twenty-nine relapsing-remitting MS patients with an acute relapse were included., Field Strength/sequence: A 3D density-adapted radial sodium sequence at 3 T using a dual-tuned (
23 Na/1 H) head coil., Assessment: Full-brain images of the tissue sodium concentration (TSC1, n = 29) and a sodium inversion recovery sequence (SIR1, n = 20) at the beginning of the anti-inflammatory therapy and on medium-term follow-up visits (days 27-99, n = 12 [TSC], n = 5 [SIR]) were measured. Regions of interest (RoIs) with contrast enhancement (T1 CE+) and without change in T1-weighted imaging (FL + T1n) were normalized (nTSC and nSIR). To gain insight on the origin of the TSC enhancement at time point 1, it is investigated whether the nTSC enhancement of the lesions is accompanied by a change of the respective nSIR. Potential prognostic value of nSIR1 is examined referring to the nTSC progression. STATISTICAL TESTS: nTSC and nSIR were compared regarding the type of lesion and the time point using a one-way ANOVA. Pearson's correlation coefficient was calculated for nTSC over nSIR and for nTSC1-nTSC2 over nSIR1. A P-value <0.05 was considered statistically significant., Results: At the first measurement, all lesion types showed increased nTSC, while nSIR was decreased in the FL + T1 n and the T1 CE+ lesions in comparison to the normal-appearing white matter. For acute lesions, the difference between nTSC at baseline and nTSC at time point 2 showed a significant correlation with the baseline nSIR., Data Conclusion: At time point 1, nTSC is increased, while nSIR is unchanged or decreased in the lesions. The mean sodium IR signal at baseline correlates with recovery or progression of an acute lesion., Evidence Level: 2 TECHNICAL EFFICACY: Stage 4., (© 2021 The Authors. Journal of Magnetic Resonance Imaging published by Wiley Periodicals LLC. on behalf of International Society for Magnetic Resonance in Medicine.)- Published
- 2022
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