24 results on '"Pampoulie, Christophe"'
Search Results
2. Supergene origin and maintenance in Atlantic cod
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Matschiner, Michael, Barth, Julia Maria Isis, Tørresen, Ole Kristian, Star, Bastiaan, Baalsrud, Helle Tessand, Brieuc, Marine Servane Ono, Pampoulie, Christophe, Bradbury, Ian, Jakobsen, Kjetill Sigurd, and Jentoft, Sissel
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- 2022
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3. The era of reference genomes in conservation genomics
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Formenti, Giulio, Theissinger, Kathrin, Fernandes, Carlos, Bista, Iliana, Bombarely, Aureliano, Bleidorn, Christoph, Čiampor, Fedor, Ciofi, Claudio, Crottini, Angelica, Godoy, José A., Hoglund, Jacob, Malukiewicz, Joanna, Mouton, Alice, Oomen, Rebekah A., Paez, Sadye, Palsbøll, Per, Pampoulie, Christophe, Ruiz-López, María José, Svardal, Hannes, Theofanopoulou, Constantina, de Vries, Jan, Waldvogel, Ann-Marie, Zhang, Goujie, Mazzoni, Camila J., Jarvis, Erich, Bálint, Miklós, Aghayan, Sargis A., Alioto, Tyler S., Almudi, Isabel, Alvarez, Nadir, Alves, Paulo C., Amorim, Isabel R., Antunes, Agostinho, Arribas, Paula, Baldrian, Petr, Berg, Paul R., Bertorelle, Giorgio, Böhne, Astrid, Bonisoli-Alquati, Andrea, Boštjančić, Ljudevit L., Boussau, Bastien, Breton, Catherine M., Buzan, Elena, Campos, Paula F., Carreras, Carlos, Castro, L. FIlipe, Chueca, Luis J., Conti, Elena, Cook-Deegan, Robert, Croll, Daniel, Cunha, Mónica V., Delsuc, Frédéric, Dennis, Alice B., Dimitrov, Dimitar, Faria, Rui, Favre, Adrien, Fedrigo, Olivier D., Fernández, Rosa, Ficetola, Gentile Francesco, Flot, Jean-François, Gabaldón, Toni, Galea Agius, Dolores R., Gallo, Guido R., Giani, Alice M., Gilbert, M. Thomas P., Grebenc, Tine, Guschanski, Katerina, Guyot, Romain, Hausdorf, Bernhard, Hawlitschek, Oliver, Heintzman, Peter D., Heinze, Berthold, Hiller, Michael, Husemann, Martin, Iannucci, Alessio, Irisarri, Iker, Jakobsen, Kjetill S., Jentoft, Sissel, Klinga, Peter, Kloch, Agnieszka, Kratochwil, Claudius F., Kusche, Henrik, Layton, Kara K.S., Leonard, Jennifer A., Lerat, Emmanuelle, Liti, Gianni, Manousaki, Tereza, Marques-Bonet, Tomas, Matos-Maraví, Pável, Matschiner, Michael, Maumus, Florian, Mc Cartney, Ann M., Meiri, Shai, Melo-Ferreira, José, Mengual, Ximo, Monaghan, Michael T., Montagna, Matteo, Mysłajek, Robert W., Neiber, Marco T., Nicolas, Violaine, Novo, Marta, Ozretić, Petar, Palero, Ferran, Pârvulescu, Lucian, Pascual, Marta, Paulo, Octávio S., Pavlek, Martina, Pegueroles, Cinta, Pellissier, Loïc, Pesole, Graziano, Primmer, Craig R., Riesgo, Ana, Rüber, Lukas, Rubolini, Diego, Salvi, Daniele, Seehausen, Ole, Seidel, Matthias, Secomandi, Simona, Studer, Bruno, Theodoridis, Spyros, Thines, Marco, Urban, Lara, Vasemägi, Anti, Vella, Adriana, Vella, Noel, Vernes, Sonja C., Vernesi, Cristiano, Vieites, David R., Waterhouse, Robert M., Wheat, Christopher W., Wörheide, Gert, Wurm, Yannick, Zammit, Gabrielle, Höglund, Jacob, Palsbøll, Per J., Ruiz-López, María J., Zhang, Guojie, and Jarvis, Erich D.
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- 2022
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4. Resolving the spatial distributions of Dipturus intermedius and Dipturus batis—the two taxa formerly known as the ‘common skate’
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Bache-Jeffreys, Maisie, de Moraes, Bárbara Lins Caldas, Ball, Rachel E., Menezes, Gui, Pálsson, Jónbjörn, Pampoulie, Christophe, Stevens, Jamie R., and Griffiths, Andrew M.
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- 2021
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5. Nesting behavior of greater eelpout (Lycodes esmarkii), identified through a predation event by spotted wolffish (Anarhichas minor)
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Kennedy, James, primary, Gunnarsson, Ásgeir, additional, Pampoulie, Christophe, additional, and Wienerroither, Rupert, additional
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- 2024
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6. Genome-wide analysis of the harbour porpoise (Phocoena phocoena) indicates isolation-by-distance across the North Atlantic and potential local adaptation in adjacent waters
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Autenrieth, Marijke, primary, Havenstein, Katja, additional, De Cahsan, Binia, additional, Canitz, Julia, additional, Benke, Harald, additional, Roos, Anna, additional, Pampoulie, Christophe, additional, Sigurðsson, Guðjón Már, additional, Siebert, Ursula, additional, Olsen, Morten Tange, additional, Biard, Vincent, additional, Heide-Jørgensen, Mads Peter, additional, Öztürk, Ayaka Amaha, additional, Öztürk, Bayram, additional, Lawson, John W., additional, and Tiedemann, Ralph, additional
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- 2023
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7. Biological information on a rare pelagic fish, black ruff Centrolophus niger, caught in Icelandic waters: distribution, feeding and otoliths
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Kennedy, James, primary, Ólafsdóttir, Anna Heiða, additional, Aradóttir, Svandís Eva, additional, Egilsdóttir, Svanhildur, additional, and Pampoulie, Christophe, additional
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- 2023
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8. Biological information on a rare pelagic fish, black ruff Centrolophus niger, caught in Icelandic waters: Distribution, feeding, and otoliths.
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Kennedy, James, Ólafsdóttir, Anna Heiða, Aradóttir, Svandís Eva, Egilsdóttir, Svanhildur, and Pampoulie, Christophe
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WATER distribution ,RARE fishes ,OTOLITHS ,PELAGIC fishes ,SIZE of fishes ,GASTROINTESTINAL contents ,FISHING nets - Abstract
Black ruff (Centrolophus niger) is a rare and poorly studied species found in both the Atlantic and Pacific Oceans and also in the Mediterranean Sea. It is sporadically caught south of Iceland during the annual International Ecosystem Summer Survey of the Nordic Seas. In total, 43 specimens were caught from 2009 to 2021, of which 41 specimens were caught during 2017–2021. All specimens, except one, were caught using a pelagic trawl (cod‐end mesh‐size: 50 mm) close to the surface (trawl depth: 0–35 m) with in situ temperature ranging from 9 to 13°C. The area south of Iceland is characterized by having warmer temperatures than other areas around the island, which might be indicative of a northern limit for the distribution of black ruff. The fish were primarily in the range of 29–46 cm with a few larger individuals up to 71 cm. Fourteen fish, caught in 2017 and 2021, were dissected to gather biological information on this species. These fish were all juveniles with no obvious sign of gonad development. Correlations between total length, fork length, and standard length are presented. Otoliths were thin and delicate with a length of ~13–16 mm, and otolith size (length, width, and area) was correlated with fish size. Much of the stomach content was at an advanced stage of digestion, but some contents could be identified and consisted of invertebrates, primarily of the orders Amphipoda and Calanoida with some unidentified fish also present. [ABSTRACT FROM AUTHOR]
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- 2024
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9. First record of Risso's dolphin Grampus griseus (Cuvier, 1812) in Icelandic waters
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Chosson, Valérie, primary, Randhawa, Haseeb S., additional, Sigurðsson, Guðjón M., additional, Halldórsson, Sverrir D., additional, Björnsson, Þorvaldur Þ., additional, Svansson, Vilhjálmur, additional, Granquist, Sandra M., additional, Gunnarsson, Karl, additional, Samarra, Filipa I. P., additional, and Pampoulie, Christophe, additional
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- 2023
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10. Exploitation shifted trophic ecology and habitat preferences of Mediterranean and Black Sea bluefin tuna over centuries
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Andrews, Adam J., primary, Pampoulie, Christophe, additional, Di Natale, Antonio, additional, Addis, Piero, additional, Bernal‐Casasola, Darío, additional, Aniceti, Veronica, additional, Carenti, Gabriele, additional, Gómez‐Fernández, Verónica, additional, Chosson, Valerie, additional, Ughi, Alice, additional, Von Tersch, Matt, additional, Fontanals‐Coll, Maria, additional, Cilli, Elisabetta, additional, Onar, Vedat, additional, Tinti, Fausto, additional, and Alexander, Michelle, additional
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- 2023
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11. Detection and distribution of the North Atlantic capelin (Mallotus villosus) using environmental DNA—comparison with data from the main fishery management survey.
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Pampoulie, Christophe, Singh, Warsha, Guðnason, Kristinn, Bárðarson, Birkir, Ólafsdóttir, Guðbjörg, Þórarinsson, Þorri, Sveinsson, Sæmundur, and Gíslason, Davið
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- 2024
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12. How genomics can help biodiversity conservation
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Theissinger, Kathrin, primary, Fernandes, Carlos, additional, Formenti, Giulio, additional, Bista, Iliana, additional, Berg, Paul R., additional, Bleidorn, Christoph, additional, Bombarely, Aureliano, additional, Crottini, Angelica, additional, Gallo, Guido R., additional, Godoy, José A., additional, Jentoft, Sissel, additional, Malukiewicz, Joanna, additional, Mouton, Alice, additional, Oomen, Rebekah A., additional, Paez, Sadye, additional, Palsbøll, Per J., additional, Pampoulie, Christophe, additional, Ruiz-López, María J., additional, Secomandi, Simona, additional, Svardal, Hannes, additional, Theofanopoulou, Constantina, additional, de Vries, Jan, additional, Waldvogel, Ann-Marie, additional, Zhang, Guojie, additional, Jarvis, Erich D., additional, Bálint, Miklós, additional, Ciofi, Claudio, additional, Waterhouse, Robert M., additional, Mazzoni, Camila J., additional, Höglund, Jacob, additional, Aghayan, Sargis A., additional, Alioto, Tyler S., additional, Almudi, Isabel, additional, Alvarez, Nadir, additional, Alves, Paulo C., additional, Amorim do Rosario, Isabel R., additional, Antunes, Agostinho, additional, Arribas, Paula, additional, Baldrian, Petr, additional, Bertorelle, Giorgio, additional, Böhne, Astrid, additional, Bonisoli-Alquati, Andrea, additional, Boštjančić, Ljudevit L., additional, Boussau, Bastien, additional, Breton, Catherine M., additional, Buzan, Elena, additional, Campos, Paula F., additional, Carreras, Carlos, additional, Castro, L. FIlipe C., additional, Chueca, Luis J., additional, Čiampor, Fedor, additional, Conti, Elena, additional, Cook-Deegan, Robert, additional, Croll, Daniel, additional, Cunha, Mónica V., additional, Delsuc, Frédéric, additional, Dennis, Alice B., additional, Dimitrov, Dimitar, additional, Faria, Rui, additional, Favre, Adrien, additional, Fedrigo, Olivier D., additional, Fernández, Rosa, additional, Ficetola, Gentile Francesco, additional, Flot, Jean-François, additional, Gabaldón, Toni, additional, Agius, Dolores R., additional, Giani, Alice M., additional, Gilbert, M. Thomas P., additional, Grebenc, Tine, additional, Guschanski, Katerina, additional, Guyot, Romain, additional, Hausdorf, Bernhard, additional, Hawlitschek, Oliver, additional, Heintzman, Peter D., additional, Heinze, Berthold, additional, Hiller, Michael, additional, Husemann, Martin, additional, Iannucci, Alessio, additional, Irisarri, Iker, additional, Jakobsen, Kjetill S., additional, Klinga, Peter, additional, Kloch, Agnieszka, additional, Kratochwil, Claudius F., additional, Kusche, Henrik, additional, Layton, Kara K.S., additional, Leonard, Jennifer A., additional, Lerat, Emmanuelle, additional, Liti, Gianni, additional, Manousaki, Tereza, additional, Marques-Bonet, Tomas, additional, Matos-Maraví, Pável, additional, Matschiner, Michael, additional, Maumus, Florian, additional, Mc Cartney, Ann M., additional, Meiri, Shai, additional, Melo-Ferreira, José, additional, Mengual, Ximo, additional, Monaghan, Michael T., additional, Montagna, Matteo, additional, Mysłajek, Robert W., additional, Neiber, Marco T., additional, Nicolas, Violaine, additional, Novo, Marta, additional, Ozretić, Petar, additional, Palero, Ferran, additional, Pârvulescu, Lucian, additional, Pascual, Marta, additional, Paulo, Octávio S., additional, Pavlek, Martina, additional, Pegueroles, Cinta, additional, Pellissier, Loïc, additional, Pesole, Graziano, additional, Primmer, Craig R., additional, Riesgo, Ana, additional, Rüber, Lukas, additional, Rubolini, Diego, additional, Salvi, Daniele, additional, Seehausen, Ole, additional, Seidel, Matthias, additional, Studer, Bruno, additional, Theodoridis, Spyros, additional, Thines, Marco, additional, Urban, Lara, additional, Vasemägi, Anti, additional, Vella, Adriana, additional, Vella, Noel, additional, Vernes, Sonja C., additional, Vernesi, Cristiano, additional, Vieites, David R., additional, Wheat, Christopher W., additional, Wörheide, Gert, additional, Wurm, Yannick, additional, and Zammit, Gabrielle, additional
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- 2023
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13. Detection and distribution of the North Atlantic capelin ( Mallotus villosus ) using environmental DNA—comparison with data from the main fishery management survey
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Pampoulie, Christophe, primary, Singh, Warsha, additional, Guðnason, Kristinn, additional, Bárðarson, Birkir, additional, Ólafsdóttir, Guðbjörg, additional, Þórarinsson, Þorri, additional, Sveinsson, Sæmundur, additional, and Gíslason, Davið, additional
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- 2023
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14. Global, regional, and cryptic population structure in a high gene-flow transatlantic fish
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Jansson, Eeva, primary, Faust, Ellika, additional, Bekkevold, Dorte, additional, Quintela, María, additional, Durif, Caroline, additional, Halvorsen, Kim Tallaksen, additional, Dahle, Geir, additional, Pampoulie, Christophe, additional, Kennedy, James, additional, Whittaker, Benjamin, additional, Unneland, Laila, additional, Post, Søren, additional, André, Carl, additional, and Glover, Kevin A., additional
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- 2023
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15. A note on a mother-foetus pair and alleged father match in the Atlantic fin whale (Balaenoptera physalus) off Iceland
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Pampoulie, Christophe, primary, Olafsdottir, Gudbjorg, additional, Hauksdottir, Sigurbjorg, additional, Skirnisdottir, Sigurlaug, additional, Olafsson, Kristinn, additional, Magnusdottir, Steinunn, additional, Chosson, Valerie, additional, Halldorsson, Sverrir Daniel, additional, Olafsdottir, Droplaug, additional, Gunnlaugsson, Thorvaldur, additional, Danielsdottir, Anna K., additional, and Vikingsson, Gisli A., additional
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- 2023
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16. How genomics can help biodiversity conservation
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Theissinger, Kathrin, Fernandes, Carlos, Formenti, Giulio, Bista, Iliana, Berg, Paul R., Bleidorn, Christoph, Bombarely, Aureliano, Crottini, Angelica, Gallo, Guido R., Godoy, José A., Jentoft, Sissel, Malukiewicz, Joanna, Mouton, Alice, Oomen, Rebekah A., Paez, Sadye, Palsbøll, Per J., Pampoulie, Christophe, Ruiz-López, María J., Secomandi, Simona, Svardal, Hannes, Theofanopoulou, Constantina, de Vries, Jan, Waldvogel, Ann-Marie, Zhang, Guojie, Jarvis, Erich D., Bálint, Miklós, Ciofi, Claudio, Waterhouse, Robert M., Mazzoni, Camila J., and Höglund, Jacob
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Genetics - Published
- 2023
17. The role of genomic signatures of directional selection and demographic history in the population structure of a marine teleost with high gene flow
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Weist, Peggy, primary, Jentoft, Sissel, additional, Tørresen, Ole K., additional, Schade, Franziska M., additional, Pampoulie, Christophe, additional, Krumme, Uwe, additional, and Hanel, Reinhold, additional
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- 2022
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18. Hidden but revealed: After years of genetic studies behavioural monitoring combined with genomics uncover new insight into the population dynamics of Atlantic cod in Icelandic waters
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Pampoulie, Christophe, primary, Berg, Paul Ragnar, additional, and Jentoft, Sissel, additional
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- 2022
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19. The genetic composition of feeding aggregations of the Atlantic mackerel (Scomber scombrus) in the central North Atlantic: A microsatellite loci approach. ICESJMS-2019-497.R1
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Gislason, David, Heylar, Sarah, Óskarsson, Guðmundur, Ólafsdóttir, Guðbjörg, Slotte, Aril, Jansen, Teunis, Jacobsen, Jan, Ólafsson, Kristinn, Skirnisdottir, Sigurlaug, Dahle, Geir, Siegstad, Helle, Joensen, Hóraldur, Curti, Kiersten, Grégoire, François, Masse, Jacques, Sveinsson, Sæmundur, Daníelsdóttir, Anna, and Pampoulie, Christophe
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Atlantic Mackerel ,Feeding grounds composition ,Microsatellite ,Population structure ,Mixed fishing analysis - Abstract
Microsatellite data for Atlantic Mackerel
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- 2022
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20. Hidden but revealed: After years of genetic studies behavioural monitoring combined with genomics uncover new insight into the population dynamics of Atlantic cod in Icelandic waters.
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Pampoulie, Christophe, Berg, Paul Ragnar, and Jentoft, Sissel
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ATLANTIC cod , *POPULATION dynamics , *CHROMOSOME inversions , *GENOMICS , *GENETIC markers , *SUSTAINABLE development , *GENE flow - Abstract
Stock structure is of paramount importance for sustainable management of exploited resources. In that context, genetic markers have been used for more than two decades to resolve spatial structure of marine exploited resources and to fully fathom stock dynamics and interactions. While genetic markers such as allozymes and RFLP dominated the debate in the early era of genetics, technology advances have provided scientists with new tools every decade to better assess stock discrimination and interactions (i.e. gene flow). Here, we provide a review of genetic studies performed to understand stock structure of Atlantic cod in Icelandic waters, from the early allozyme approaches to the genomic work currently carried out. We further highlight the importance of the generation of a chromosome‐anchored genome assembly together with whole‐genome population data, which drastically changed our perception of the possible management units to consider. After nearly 60 years of genetic investigation of Atlantic cod structure in Icelandic waters, genetic (and later genomic) data combined with behavioural monitoring using Data Storage Tags shifted the attention from geographical population structures to behavioural ecotypes. This review also demonstrates the need for future research to further disentangle the impact of these ecotypes (and gene flow among them) on the population structure of Atlantic cod in Icelandic waters. It also highlights the importance of whole‐genome data to unravel unexpected within‐species diversity related to chromosomal inversions and associated supergenes, which are important to consider for future development of sustainable management programmes of the species within the North Atlantic. [ABSTRACT FROM AUTHOR]
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- 2023
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21. Global, regional, and cryptic population structure in a high gene-flow transatlantic fish
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Jansson, Eeva, primary, Faust, Ellika, additional, Bekkevold, Dorte, additional, Quintela, María, additional, Durif, Caroline, additional, Halvorsen, Kim Tallaksen, additional, Dahle, Geir, additional, Pampoulie, Christophe S., additional, Kennedy, James, additional, Whittaker, Benjamin, additional, Unneland, Laila, additional, André, Carl, additional, and Glover, Kevin A., additional
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- 2022
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22. Stock Identification Methods Working Group (SIMWG)
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Berg, Florian, Cadrin , Steve, Castilho, Rita, Hidalgo, Manuel, Hüssy, Karin, Kerr, Lisa, Leinonen, Tuomas, Mackenzie, Ken, Mahe, Kélig, Mariani, Stefano, McBride, Richard, Albertsen, Christoffer Moesgaard, Murray, David, Pampoulie, Christophe, Rodríguez-Ezpeleta, Naiara, Stransky, Christoph, Tanner, Susanne, White, Emma, Wennerström, Lovisa, Whitener, Zachary, and Zemeckis, Douglas
- Abstract
The Stock Identification Methods Working Group (SIMWG) reviews new methods for the definition and investigation of stock structure and provides recommendations to other ICES expert groups on how to interpret patterns of population structure.In 2022, SIMWG continued providing annual updates on recent applications of stock identification methods to species assessed by ICES and on advances in stock identification methods. Based on the wide expertise of SIMWG members, we provide reviews of recent literature on genetics growth marks in calcified structures, life history parameters, morphometrics/ meristics, tagging, otolith shape, otolith chemistry, parasites and interdisciplinary approaches.A key activity of SIMWG is to address requests by ICES working groups for technical recommendations on issues of stock identity. In the current term, we reviewed the outcome of the Workshop on Stock Identification of North Sea Cod (WKNSCodID) and the report of a project on herring stock structure upon request by the ICES Herring Assessment Working Group (HAWG). Moreover, SIMWG members contributed to the preparation of the Benchmark Workshop for selected elasmobranch stocks (WKELASMO) and reviewed the outcome of the Workshop on Stock Identification of West of Scotland Sea Cod (WK6aCodID). In 2022, the group reviewed and discussed stock structure of hake and anglerfish stocks by request of the Working Group for the Bay of Biscay and the Iberian Waters Ecoregion (WGBIE) and of anchovy by request of the Working Group on Southern Horse Mackerel, Anchovy, and Sardine (WGHANSA).SIMWG contributes to the general understanding of the biological features of the north Atlantic ecosystem through its work to describe fish population structure. Additionally, SIMWG’s annual reviews on advances in stock identification methods keep ICES members abreast of best practices in this field of study. SIMWG expert reviews on questions of stock structure for particular ICES species are directly relevant to the appropriate definition of stock and contribute to the accuracy of stock assessment and effectiveness of management actions. We see an important role for SIMWG in the future as ICES copes with the shifting distributions of fishery resources and questions regarding the appropriate definition of fish stocks. Understanding stock structure is a fundamental requirement before any assessment or modelling on a stock can be contemplated and SIMWG will continue to work with ICES expert groups to address pressing stock identification issues.
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- 2022
23. D1.2 SUMMER background knowledge available in open access
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Wittmann, Astrid C, Alonso-Sáez, Laura, Blümel, Martina, Estupiñán, Mónica, Galino Barres, Jorge, Hernández-León, Santiago, Iñarra Chastagnol, Bruno, Jonasdottir, Sigrun, Kaartvedt, Stein, Knutsen, Tor, Lindegren, Martin, Martin, Adrian, Benguria, Beatriz, Aksnes, Dag, Andersen, Tom, Aristegui, Javier, Belharet, Mokrane, Brierley, Andrew, Lindemann, Chris, Giering, Sari, Hernandez, Nauzet, Maury, Olivier, Olivar, M. Pilar, Pampoulie, Christophe, Proud, Roland, Silva, Mónica, and Spitz, Jérôme
- Abstract
The SUMMER project will explore recent findings that suggest that the global ocean’s mesopelagic zone contains 90 % of the planet’s fish biomass. Even if this is correct by only a fraction of this value, the exploitation potential in fishmeal production, nutraceuticals and pharmaceuticals is enormous. However, as the role of mesopelagic fish in pelagic ecosystems is not well understood, it is necessary to first establish methods to accurately estimate their biomass, taxonomic/functional diversity, contribution to the global carbon cycle and potential as a sustainable fishery. Using state-of-the-art tools (e.g. eDNA, acoustics and gut analysis), SUMMER will also investigate environmental repercussions of such exploitation, and quantify the impact of commercial extraction on pelagic ecosystems. This deliverable reports on the outcomes of Task 1.2: “Assemble relevant research outputs from research”. It addresses the second objective of Work Package 1, which is to compile background knowledge suitable to contributing to the scientific objectives of the SUMMER project. In total, 160 literature and 200 data references were identified, covering topics on mesopelagic resources with a focus on taxa specific biomass and community composition. The references and links are provided as Excel table and reference database in .ris format in open access. Ca. 1 TB of historical echosounder, abundance and biomass data were published in open access under this task via the databases PANGAEA and NMDC.
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- 2021
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24. The era of reference genomes in conservation genomics
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Giulio Formenti, Kathrin Theissinger, Carlos Fernandes, Iliana Bista, Aureliano Bombarely, Christoph Bleidorn, Claudio Ciofi, Angelica Crottini, José A. Godoy, Jacob Höglund, Joanna Malukiewicz, Alice Mouton, Rebekah A. Oomen, Sadye Paez, Per J. Palsbøll, Christophe Pampoulie, María J. Ruiz-López, Hannes Svardal, Constantina Theofanopoulou, Jan de Vries, Ann-Marie Waldvogel, Guojie Zhang, Camila J. Mazzoni, Erich D. Jarvis, Miklós Bálint, Fedor Čiampor, Jacob Hoglund, Per Palsbøll, María José Ruiz-López, Goujie Zhang, Erich Jarvis, Sargis A. Aghayan, Tyler S. Alioto, Isabel Almudi, Nadir Alvarez, Paulo C. Alves, Isabel R. Amorim, Agostinho Antunes, Paula Arribas, Petr Baldrian, Paul R. Berg, Giorgio Bertorelle, Astrid Böhne, Andrea Bonisoli-Alquati, Ljudevit L. Boštjančić, Bastien Boussau, Catherine M. Breton, Elena Buzan, Paula F. Campos, Carlos Carreras, L. FIlipe Castro, Luis J. Chueca, Elena Conti, Robert Cook-Deegan, Daniel Croll, Mónica V. Cunha, Frédéric Delsuc, Alice B. Dennis, Dimitar Dimitrov, Rui Faria, Adrien Favre, Olivier D. Fedrigo, Rosa Fernández, Gentile Francesco Ficetola, Jean-François Flot, Toni Gabaldón, Dolores R. Galea Agius, Guido R. Gallo, Alice M. Giani, M. Thomas P. Gilbert, Tine Grebenc, Katerina Guschanski, Romain Guyot, Bernhard Hausdorf, Oliver Hawlitschek, Peter D. Heintzman, Berthold Heinze, Michael Hiller, Martin Husemann, Alessio Iannucci, Iker Irisarri, Kjetill S. Jakobsen, Sissel Jentoft, Peter Klinga, Agnieszka Kloch, Claudius F. Kratochwil, Henrik Kusche, Kara K.S. Layton, Jennifer A. Leonard, Emmanuelle Lerat, Gianni Liti, Tereza Manousaki, Tomas Marques-Bonet, Pável Matos-Maraví, Michael Matschiner, Florian Maumus, Ann M. Mc Cartney, Shai Meiri, José Melo-Ferreira, Ximo Mengual, Michael T. Monaghan, Matteo Montagna, Robert W. Mysłajek, Marco T. Neiber, Violaine Nicolas, Marta Novo, Petar Ozretić, Ferran Palero, Lucian Pârvulescu, Marta Pascual, Octávio S. Paulo, Martina Pavlek, Cinta Pegueroles, Loïc Pellissier, Graziano Pesole, Craig R. Primmer, Ana Riesgo, Lukas Rüber, Diego Rubolini, Daniele Salvi, Ole Seehausen, Matthias Seidel, Simona Secomandi, Bruno Studer, Spyros Theodoridis, Marco Thines, Lara Urban, Anti Vasemägi, Adriana Vella, Noel Vella, Sonja C. Vernes, Cristiano Vernesi, David R. Vieites, Robert M. Waterhouse, Christopher W. Wheat, Gert Wörheide, Yannick Wurm, Gabrielle Zammit, Repositório da Universidade de Lisboa, Formenti, Giulio, Theissinger, Kathrin, Fernandes, Carlo, Bista, Iliana, Bombarely, Aureliano, Bleidorn, Christoph, Ciofi, Claudio, Crottini, Angelica, Godoy, José A., Höglund, Jacob, Malukiewicz, Joanna, Mouton, Alice, Oomen, Rebekah A., Paez, Sadye, Palsbøll, Per J., Pampoulie, Christophe, Ruiz-López, María J., Svardal, Hanne, Theofanopoulou, Constantina, de Vries, Jan, Waldvogel, Ann-Marie, Zhang, Guojie, Mazzoni, Camila J., Jarvis, Erich D., Bálint, Mikló, Čiampor, Fedor, Hoglund, Jacob, Palsbøll, Per, José Ruiz-López, María, Zhang, Goujie, Jarvis, Erich, Aghayan, Sargis A., Alioto, Tyler S., Almudi, Isabel, Alvarez, Nadir, Alves, Paulo C., R Amorim, Isabel, Antunes, Agostinho, Arribas, Paula, Baldrian, Petr, R Berg, Paul, Bertorelle, Giorgio, Böhne, Astrid, Bonisoli-Alquati, Andrea, L Boštjančić, Ljudevit, Boussau, Bastien, M Breton, Catherine, Buzan, Elena, F Campos, Paula, Carreras, Carlo, FIlipe Castro, L., Chueca, Luis J., Conti, Elena, Cook-Deegan, Robert, Croll, Daniel, V Cunha, Mónica, Delsuc, Frédéric, Dennis, Alice B., Dimitrov, Dimitar, Faria, Rui, Favre, Adrien, Fedrigo, Olivier D., Fernández, Rosa, Francesco Ficetola, Gentile, Flot, Jean-Françoi, Gabaldón, Toni, Galea Agius, Dolores R., Gallo, Guido R., Giani, Alice M., Thomas P Gilbert, M., Grebenc, Tine, Guschanski, Katerina, Guyot, Romain, Hausdorf, Bernhard, Hawlitschek, Oliver, D Heintzman, Peter, Heinze, Berthold, Hiller, Michael, Husemann, Martin, Iannucci, Alessio, Irisarri, Iker, S Jakobsen, Kjetill, Jentoft, Sissel, Klinga, Peter, Kloch, Agnieszka, F Kratochwil, Claudiu, Kusche, Henrik, KS Layton, Kara, A Leonard, Jennifer, Lerat, Emmanuelle, Liti, Gianni, Manousaki, Tereza, Marques-Bonet, Toma, Matos-Maraví, Pável, Matschiner, Michael, Maumus, Florian, Mc Cartney, Ann M., Meiri, Shai, Melo-Ferreira, José, Mengual, Ximo, Monaghan, Michael T., Montagna, Matteo, Robertwmysłajek, T Neiber, Marco, Nicolas, Violaine, Novo, Marta, Ozretić, Petar, Palero, Ferran, Pârvulescu, Lucian, Pascual, Marta, Paulo, Octávio S., Pavlek, Martina, Pegueroles, Cinta, Pellissier, Loc, Pesole, Graziano, R Primmer, Craig, Riesgo, Ana, Rüber, Luka, Rubolini, Diego, Salvi, Daniele, Seehausen, Ole, Seidel, Matthia, Secomandi, Simona, Studer, Bruno, Theodoridis, Spyro, Thines, Marco, Urban, Lara, Vasemägi, Anti, Vella, Adriana, Vella, Noel, C Vernes, Sonja, Vernesi, Cristiano, R Vieites, David, M Waterhouse, Robert, W Wheat, Christopher, Wörheide, Gert, Wurm, Yannick, Zammit., and Gabrielle, Bioinformatique, phylogénie et génomique évolutive (BPGE), Département PEGASE [LBBE] (PEGASE), Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 (LBBE), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut National de Recherche en Informatique et en Automatique (Inria)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut National de Recherche en Informatique et en Automatique (Inria)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 (LBBE), Université de Lyon-Université de Lyon-Institut National de Recherche en Informatique et en Automatique (Inria)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS), Eléments transposables, évolution, populations, Département génétique, interactions et évolution des génomes [LBBE] (GINSENG), Institut des Sciences de l'Evolution de Montpellier (UMR ISEM), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-École Pratique des Hautes Études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université de Montpellier (UM)-Institut de recherche pour le développement [IRD] : UR226-Centre National de la Recherche Scientifique (CNRS), Barcelona Supercomputing Center, European Reference Genome Atlas (ERGA) Consortium, University of St Andrews. School of Biology, University of St Andrews. St Andrews Bioinformatics Unit, Palsbøll lab, Marine Biology, University of Zurich, and Bálint, Miklós
- Subjects
QH301 Biology ,580 Plants (Botany) ,Genetics -- Research ,Evolutionsbiologi ,biodiversity conservation ,conservation genetics ,ERGA ,European Reference Genome Atlas ,Conservation genetics ,Biodiversity conservation ,Animal genome mapping ,udc:630*1 ,Genome ,GE ,[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE] ,[SDE.BE.BIOD]Environmental Sciences/Biodiversity and Ecology/domain_sde.be.biod ,Biodiversity [MeSH] ,Genomics [MeSH] ,Ecology, Evolution, Behavior and Systematics ,Genome [MeSH] ,3rd-DAS ,Genomics ,Biodiversity ,referenčni genomi ,[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM] ,[SDE.BE.BEC]Environmental Sciences/Biodiversity and Ecology/domain_sde.be.bec ,Chemistry ,10121 Department of Systematic and Evolutionary Botany ,genomika ,GE Environmental Sciences ,Informàtica::Aplicacions de la informàtica::Bioinformàtica [Àrees temàtiques de la UPC] ,biodiverziteta ,Settore BIO/18 - GENETICA ,education ,QH426 Genetics ,QH301 ,VDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470 ,[SDE.BE.EVO]Environmental Sciences/Biodiversity and Ecology/domain_sde.be.evo ,Genetics ,genomi ,10211 Zurich-Basel Plant Science Center ,Genomes ,Genetik ,Biology ,QH426 ,Evolutionary Biology ,Ambientale ,Ecología ,Genética ,1105 Ecology, Evolution, Behavior and Systematics ,Wildlife conservation ,570 Life sciences ,biology ,Human medicine ,Animal genetics ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology ,Genètica - Abstract
Progress in genome sequencing now enables the large-scale generation of reference genomes. Various international initiatives aim to generate reference genomes representing global biodiversity. These genomes provide unique insights into genomic diversity and architecture, thereby enabling comprehensive analyses of population and functional genomics, and are expected to revolutionize conservation genomics., Trends in Ecology & Evolution, 37 (3), ISSN:0169-5347, ISSN:1872-8383
- Published
- 2022
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