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228 results on '"Sun, Zhifu"'

3. Hypoxia-Inducible Factor 1α Stabilization Restores Epigenetic Control of Nitric Oxide Synthase 1 Expression and Reverses Gastroparesis in Female Diabetic Mice

Author

Gao, Fei, Hayashi, Yujiro, Saravanaperumal, Siva Arumugam, Gajdos, Gabriella B., Syed, Sabriya A., Bhagwate, Aditya V., Ye, Zhenqing, Zhong, Jian, Zhang, Yuebo, Choi, Egan L., Kvasha, Sergiy M., Kaur, Jagneet, Paradise, Brooke D., Cheng, Liang, Simone, Brandon W., Wright, Alec M., Kellogg, Todd A., Kendrick, Michael L., McKenzie, Travis J., Sun, Zhifu, Yan, Huihuang, Yu, Chuanhe, Bharucha, Adil E., Linden, David R., Lee, Jeong-Heon, and Ordog, Tamas

Published
2023
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5. G9a Modulates Lipid Metabolism in CD4 T Cells to Regulate Intestinal Inflammation

Author

Ramos, Guilherme Piovezani, Bamidele, Adebowale O., Klatt, Emily E., Sagstetter, Mary R., Kurdi, Ahmed T., Hamdan, Feda H., Kosinsky, Robyn Laura, Gaballa, Joseph M., Nair, Asha, Sun, Zhifu, Dasari, Surendra, Lanza, Ian R., Rozeveld, Cody N., Schott, Micah B., Urrutia, Guillermo, Westphal, Maria S., Clarkson, Benjamin D., Howe, Charles L., Marietta, Eric V., Luckey, David H., Murray, Joseph A., Gonzalez, Michelle, Braga Neto, Manuel B., Gibbons, Hunter R., Smyrk, Thomas C., Johnsen, Steven, Lomberk, Gwen, and Faubion, William A.

Published
2023
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6. Estrogen receptor beta repurposes EZH2 to suppress oncogenic NFκB/p65 signaling in triple negative breast cancer

Author

Aspros, Kirsten G. M., Carter, Jodi M., Hoskin, Tanya L., Suman, Vera J., Subramaniam, Malayannan, Emch, Michael J., Ye, Zhenqing, Sun, Zhifu, Sinnwell, Jason P., Thompson, Kevin J., Tang, Xiaojia, Rodman, Esther P. B., Wang, Xiyin, Nelson, Adam W., Chernukhin, Igor, Hamdan, Feda H., Bruinsma, Elizabeth S., Carroll, Jason S., Fernandez-Zapico, Martin E., Johnsen, Steven A., Kalari, Krishna R., Huang, Haojie, Leon-Ferre, Roberto A., Couch, Fergus J., Ingle, James N., Goetz, Matthew P., and Hawse, John R.

Published
2022
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8. An investigation of plasma cell-free RNA for the detection of colorectal cancer: From transcriptome marker selection to targeted validation.

Author

Northrop-Albrecht, Emmalee J., Wu, Chung Wah, Berger, Calise K., Taylor, William R., Foote, Patrick H., Doering, Karen A., Gonser, Anna M., Bhagwate, Aditya, Sun, Zhifu, Mahoney, Douglas W., Burger, Kelli N., Boardman, Lisa A., and Kisiel, John B.

Abstract

Regular screening for colorectal cancer (CRC) is critical for early detection and long-term survival. Despite the current screening options available and advancements in therapies there will be around 53,000 CRC related deaths this year. There is great interest in non-invasive alternatives such as plasma cell-free RNA (cfRNA) for diagnostic, prognostic, and predictive applications. In the current study, our aim was to identify and validate potential cfRNA candidates to improve early CRC diagnosis. In phase 1 (n = 49; 25 controls, 24 cancers), discovery total RNA sequencing was performed. Select exons underwent validation in phase 2 (n = 73; 35 controls, 29 cancers, 9 adenomas) using targeted capture sequencing (n = 10,371 probes). In phase 3 (n = 57; 30 controls, 27 cancers), RT-qPCR was performed on previously identified candidates (n = 99). There were 895 exons that were differentially expressed (325 upregulated, 570 downregulated) among cancers versus controls. In phases 2 and 3, fewer markers were validated than expected in independent sets of patients, most of which were from previously published literature (FGA, FGB, GPR107, CDH3, and RP23AP7). In summary, we optimized laboratory processes and data analysis strategies which can serve as methodological framework for future plasma RNA studies beyond just the scope of CRC detection. Additionally, further exploration is needed in order to determine if the few cfRNA candidates identified in this study have clinical utility for early CRC detection. Over time, advancements in technologies, data analysis, and RNA preservation methods at time of collection may improve the biological and technical reproducibility of cfRNA biomarkers and enhance the feasibility of RNA-based liquid biopsies. [ABSTRACT FROM AUTHOR]

Published
2024
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14. Corrigendum to “Host immunity and KLF 11 deficiency together promote fibrosis in a mouse model of endometriosis” [BBA - Mol. Basis of Dis. 1869 (2023) 166784]

Author

Grande, Joseph, primary, Jones, Tiffanny L., additional, Sun, Zhifu, additional, Chanana, Pritha, additional, Jaiswal, Indu, additional, Leontovich, Alexey, additional, Carapanceanu, Nicoletta, additional, Carapanceanu, Valentin, additional, Saadalla, Abdulrahman, additional, Osman, Abu, additional, Famuyide, Abimbola O., additional, Daftary, Gaurang S., additional, Khan, Zaraq, additional, and Khazaie, Khashayarsha, additional

Published
2023
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18. Supplementary Table 2 from Genetic Variants Associated with the Risk of Chronic Obstructive Pulmonary Disease with and without Lung Cancer

Author

de Andrade, Mariza, primary, Li, Yan, primary, Marks, Randolph S., primary, Deschamps, Claude, primary, Scanlon, Paul D., primary, Olswold, Curtis L., primary, Jiang, Ruoxiang, primary, Swensen, Stephen J., primary, Sun, Zhifu, primary, Cunningham, Julie M., primary, Wampfler, Jason A., primary, Limper, Andrew H., primary, Midthun, David E., primary, and Yang, Ping, primary

Published
2023
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19. Data from Genetic Variants Associated with the Risk of Chronic Obstructive Pulmonary Disease with and without Lung Cancer

Author

de Andrade, Mariza, primary, Li, Yan, primary, Marks, Randolph S., primary, Deschamps, Claude, primary, Scanlon, Paul D., primary, Olswold, Curtis L., primary, Jiang, Ruoxiang, primary, Swensen, Stephen J., primary, Sun, Zhifu, primary, Cunningham, Julie M., primary, Wampfler, Jason A., primary, Limper, Andrew H., primary, Midthun, David E., primary, and Yang, Ping, primary

Published
2023
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20. Supplementary Table 3 from Genetic Variants Associated with the Risk of Chronic Obstructive Pulmonary Disease with and without Lung Cancer

Author

de Andrade, Mariza, primary, Li, Yan, primary, Marks, Randolph S., primary, Deschamps, Claude, primary, Scanlon, Paul D., primary, Olswold, Curtis L., primary, Jiang, Ruoxiang, primary, Swensen, Stephen J., primary, Sun, Zhifu, primary, Cunningham, Julie M., primary, Wampfler, Jason A., primary, Limper, Andrew H., primary, Midthun, David E., primary, and Yang, Ping, primary

Published
2023
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21. Supplementary Table 1 from Genetic Variants Associated with the Risk of Chronic Obstructive Pulmonary Disease with and without Lung Cancer

Author

de Andrade, Mariza, primary, Li, Yan, primary, Marks, Randolph S., primary, Deschamps, Claude, primary, Scanlon, Paul D., primary, Olswold, Curtis L., primary, Jiang, Ruoxiang, primary, Swensen, Stephen J., primary, Sun, Zhifu, primary, Cunningham, Julie M., primary, Wampfler, Jason A., primary, Limper, Andrew H., primary, Midthun, David E., primary, and Yang, Ping, primary

Published
2023
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22. Data from Fine Mapping of Chromosome 6q23-25 Region in Familial Lung Cancer Families Reveals RGS17 as a Likely Candidate Gene

Author

You, Ming, primary, Wang, Daolong, primary, Liu, Pengyuan, primary, Vikis, Haris, primary, James, Michael, primary, Lu, Yan, primary, Wang, Yian, primary, Wang, Min, primary, Chen, Qiong, primary, Jia, Dongmei, primary, Liu, Yan, primary, Wen, Weidong, primary, Yang, Ping, primary, Sun, Zhifu, primary, Pinney, Susan M., primary, Zheng, Wei, primary, Shu, Xiao-Ou, primary, Long, Jirong, primary, Gao, Yu-Tang, primary, Xiang, Yong-Bing, primary, Chow, Wong-Ho, primary, Rothman, Nat, primary, Petersen, Gloria M., primary, de Andrade, Mariza, primary, Wu, Yanhong, primary, Cunningham, Julie M., primary, Wiest, Jonathan S., primary, Fain, Pamela R., primary, Schwartz, Ann G., primary, Girard, Luc, primary, Gazdar, Adi, primary, Gaba, Colette, primary, Rothschild, Henry, primary, Mandal, Diptasri, primary, Coons, Teresa, primary, Lee, Juwon, primary, Kupert, Elena, primary, Seminara, Daniela, primary, Minna, John, primary, Bailey-Wilson, Joan E., primary, Amos, Christopher I., primary, and Anderson, Marshall W., primary

Published
2023
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23. Supplementary Tables 1-4 from Genetic Variations in Multiple Drug Action Pathways and Survival in Advanced Stage Non–Small Cell Lung Cancer Treated with Chemotherapy

Author

Li, Yafei, primary, Sun, Zhifu, primary, Cunningham, Julie M., primary, Aubry, Marie C., primary, Wampfler, Jason A., primary, Croghan, Gary A., primary, Johnson, Cassandra, primary, Wu, Danli, primary, Aakre, Jeremiah A., primary, Molina, Julian, primary, Wang, Liewei, primary, Pankratz, V. Shane, primary, and Yang, Ping, primary

Published
2023
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24. Supplemental Figures 1-6 from New DNA Methylation Markers for Pancreatic Cancer: Discovery, Tissue Validation, and Pilot Testing in Pancreatic Juice

Author

Kisiel, John B., primary, Raimondo, Massimo, primary, Taylor, William R., primary, Yab, Tracy C., primary, Mahoney, Douglas W., primary, Sun, Zhifu, primary, Middha, Sumit, primary, Baheti, Saurabh, primary, Zou, Hongzhi, primary, Smyrk, Thomas C., primary, Boardman, Lisa A., primary, Petersen, Gloria M., primary, and Ahlquist, David A., primary

Published
2023
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25. Supplemental Table 2 from New DNA Methylation Markers for Pancreatic Cancer: Discovery, Tissue Validation, and Pilot Testing in Pancreatic Juice

Author

Kisiel, John B., primary, Raimondo, Massimo, primary, Taylor, William R., primary, Yab, Tracy C., primary, Mahoney, Douglas W., primary, Sun, Zhifu, primary, Middha, Sumit, primary, Baheti, Saurabh, primary, Zou, Hongzhi, primary, Smyrk, Thomas C., primary, Boardman, Lisa A., primary, Petersen, Gloria M., primary, and Ahlquist, David A., primary

Published
2023
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26. Supplementary Figure 1 from Increased miR-708 Expression in NSCLC and Its Association with Poor Survival in Lung Adenocarcinoma from Never Smokers

Author

Jang, Jin Sung, primary, Jeon, Hyo-Sung, primary, Sun, Zhifu, primary, Aubry, Marie Christine, primary, Tang, Hui, primary, Park, Cheol-Hong, primary, Rakhshan, Fariborz, primary, Schultz, Debra A., primary, Kolbert, Christopher P., primary, Lupu, Ruth, primary, Park, Jae Yong, primary, Harris, Curtis C., primary, Yang, Ping, primary, and Jen, Jin, primary

Published
2023
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27. Supplementary Data from Discovery, Validation, and Application of Novel Methylated DNA Markers for Detection of Esophageal Cancer in Plasma

Author

Qin, Yi, primary, Wu, Chung W., primary, Taylor, William R., primary, Sawas, Tarek, primary, Burger, Kelli N., primary, Mahoney, Douglas W., primary, Sun, Zhifu, primary, Yab, Tracy C., primary, Lidgard, Graham P., primary, Allawi, Hatim T., primary, Buttar, Navtej S., primary, Smyrk, Thomas C., primary, Iyer, Prasad G., primary, Katzka, David A., primary, Ahlquist, David A., primary, and Kisiel, John B., primary

Published
2023
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28. Translation on this Article from Fine Mapping of Chromosome 6q23-25 Region in Familial Lung Cancer Families Reveals RGS17 as a Likely Candidate Gene

Author

You, Ming, primary, Wang, Daolong, primary, Liu, Pengyuan, primary, Vikis, Haris, primary, James, Michael, primary, Lu, Yan, primary, Wang, Yian, primary, Wang, Min, primary, Chen, Qiong, primary, Jia, Dongmei, primary, Liu, Yan, primary, Wen, Weidong, primary, Yang, Ping, primary, Sun, Zhifu, primary, Pinney, Susan M., primary, Zheng, Wei, primary, Shu, Xiao-Ou, primary, Long, Jirong, primary, Gao, Yu-Tang, primary, Xiang, Yong-Bing, primary, Chow, Wong-Ho, primary, Rothman, Nat, primary, Petersen, Gloria M., primary, de Andrade, Mariza, primary, Wu, Yanhong, primary, Cunningham, Julie M., primary, Wiest, Jonathan S., primary, Fain, Pamela R., primary, Schwartz, Ann G., primary, Girard, Luc, primary, Gazdar, Adi, primary, Gaba, Colette, primary, Rothschild, Henry, primary, Mandal, Diptasri, primary, Coons, Teresa, primary, Lee, Juwon, primary, Kupert, Elena, primary, Seminara, Daniela, primary, Minna, John, primary, Bailey-Wilson, Joan E., primary, Amos, Christopher I., primary, and Anderson, Marshall W., primary

Published
2023
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29. Supplementary Figure 3C from Genetic Variations in Multiple Drug Action Pathways and Survival in Advanced Stage Non–Small Cell Lung Cancer Treated with Chemotherapy

Author

Li, Yafei, primary, Sun, Zhifu, primary, Cunningham, Julie M., primary, Aubry, Marie C., primary, Wampfler, Jason A., primary, Croghan, Gary A., primary, Johnson, Cassandra, primary, Wu, Danli, primary, Aakre, Jeremiah A., primary, Molina, Julian, primary, Wang, Liewei, primary, Pankratz, V. Shane, primary, and Yang, Ping, primary

Published
2023
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30. Supplementary Figure 2B from Genetic Variations in Multiple Drug Action Pathways and Survival in Advanced Stage Non–Small Cell Lung Cancer Treated with Chemotherapy

Author

Li, Yafei, primary, Sun, Zhifu, primary, Cunningham, Julie M., primary, Aubry, Marie C., primary, Wampfler, Jason A., primary, Croghan, Gary A., primary, Johnson, Cassandra, primary, Wu, Danli, primary, Aakre, Jeremiah A., primary, Molina, Julian, primary, Wang, Liewei, primary, Pankratz, V. Shane, primary, and Yang, Ping, primary

Published
2023
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31. Supplementary Figure 1C from Genetic Variations in Multiple Drug Action Pathways and Survival in Advanced Stage Non–Small Cell Lung Cancer Treated with Chemotherapy

Author

Li, Yafei, primary, Sun, Zhifu, primary, Cunningham, Julie M., primary, Aubry, Marie C., primary, Wampfler, Jason A., primary, Croghan, Gary A., primary, Johnson, Cassandra, primary, Wu, Danli, primary, Aakre, Jeremiah A., primary, Molina, Julian, primary, Wang, Liewei, primary, Pankratz, V. Shane, primary, and Yang, Ping, primary

Published
2023
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33. Data from Genetic Variation Predicting Cisplatin Cytotoxicity Associated with Overall Survival in Lung Cancer Patients Receiving Platinum-Based Chemotherapy

Author

Tan, Xiang-Lin, primary, Moyer, Ann M., primary, Fridley, Brooke L., primary, Schaid, Daniel J., primary, Niu, Nifang, primary, Batzler, Anthony J., primary, Jenkins, Gregory D., primary, Abo, Ryan P., primary, Li, Liang, primary, Cunningham, Julie M., primary, Sun, Zhifu, primary, Yang, Ping, primary, and Wang, Liewei, primary

Published
2023
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34. Supplemental Table 1 from New DNA Methylation Markers for Pancreatic Cancer: Discovery, Tissue Validation, and Pilot Testing in Pancreatic Juice

Author

Kisiel, John B., primary, Raimondo, Massimo, primary, Taylor, William R., primary, Yab, Tracy C., primary, Mahoney, Douglas W., primary, Sun, Zhifu, primary, Middha, Sumit, primary, Baheti, Saurabh, primary, Zou, Hongzhi, primary, Smyrk, Thomas C., primary, Boardman, Lisa A., primary, Petersen, Gloria M., primary, and Ahlquist, David A., primary

Published
2023
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35. Data from Genetic Variations in Multiple Drug Action Pathways and Survival in Advanced Stage Non–Small Cell Lung Cancer Treated with Chemotherapy

Author

Li, Yafei, primary, Sun, Zhifu, primary, Cunningham, Julie M., primary, Aubry, Marie C., primary, Wampfler, Jason A., primary, Croghan, Gary A., primary, Johnson, Cassandra, primary, Wu, Danli, primary, Aakre, Jeremiah A., primary, Molina, Julian, primary, Wang, Liewei, primary, Pankratz, V. Shane, primary, and Yang, Ping, primary

Published
2023
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36. Supplemental legend from Pathways Impacted by Genomic Alterations in Pulmonary Carcinoid Tumors

Author

Asiedu, Michael K., primary, Thomas, Charles F., primary, Dong, Jie, primary, Schulte, Sandra C., primary, Khadka, Prasidda, primary, Sun, Zhifu, primary, Kosari, Farhad, primary, Jen, Jin, primary, Molina, Julian, primary, Vasmatzis, George, primary, Kuang, Ray, primary, Aubry, Marie Christine, primary, Yang, Ping, primary, and Wigle, Dennis A., primary

Published
2023
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37. Supplementary Table 1 from Increased miR-708 Expression in NSCLC and Its Association with Poor Survival in Lung Adenocarcinoma from Never Smokers

Author

Jang, Jin Sung, primary, Jeon, Hyo-Sung, primary, Sun, Zhifu, primary, Aubry, Marie Christine, primary, Tang, Hui, primary, Park, Cheol-Hong, primary, Rakhshan, Fariborz, primary, Schultz, Debra A., primary, Kolbert, Christopher P., primary, Lupu, Ruth, primary, Park, Jae Yong, primary, Harris, Curtis C., primary, Yang, Ping, primary, and Jen, Jin, primary

Published
2023
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39. Supplementary Table 2 from Increased miR-708 Expression in NSCLC and Its Association with Poor Survival in Lung Adenocarcinoma from Never Smokers

Author

Jang, Jin Sung, primary, Jeon, Hyo-Sung, primary, Sun, Zhifu, primary, Aubry, Marie Christine, primary, Tang, Hui, primary, Park, Cheol-Hong, primary, Rakhshan, Fariborz, primary, Schultz, Debra A., primary, Kolbert, Christopher P., primary, Lupu, Ruth, primary, Park, Jae Yong, primary, Harris, Curtis C., primary, Yang, Ping, primary, and Jen, Jin, primary

Published
2023
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41. Supplementary Figure 4A from Genetic Variations in Multiple Drug Action Pathways and Survival in Advanced Stage Non–Small Cell Lung Cancer Treated with Chemotherapy

Author

Li, Yafei, primary, Sun, Zhifu, primary, Cunningham, Julie M., primary, Aubry, Marie C., primary, Wampfler, Jason A., primary, Croghan, Gary A., primary, Johnson, Cassandra, primary, Wu, Danli, primary, Aakre, Jeremiah A., primary, Molina, Julian, primary, Wang, Liewei, primary, Pankratz, V. Shane, primary, and Yang, Ping, primary

Published
2023
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44. Supplementary Figure 2 from Increased miR-708 Expression in NSCLC and Its Association with Poor Survival in Lung Adenocarcinoma from Never Smokers

Author

Jang, Jin Sung, primary, Jeon, Hyo-Sung, primary, Sun, Zhifu, primary, Aubry, Marie Christine, primary, Tang, Hui, primary, Park, Cheol-Hong, primary, Rakhshan, Fariborz, primary, Schultz, Debra A., primary, Kolbert, Christopher P., primary, Lupu, Ruth, primary, Park, Jae Yong, primary, Harris, Curtis C., primary, Yang, Ping, primary, and Jen, Jin, primary

Published
2023
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47. Supplementary Figure 1, Table 1 from Genetic Variation Predicting Cisplatin Cytotoxicity Associated with Overall Survival in Lung Cancer Patients Receiving Platinum-Based Chemotherapy

Author

Tan, Xiang-Lin, primary, Moyer, Ann M., primary, Fridley, Brooke L., primary, Schaid, Daniel J., primary, Niu, Nifang, primary, Batzler, Anthony J., primary, Jenkins, Gregory D., primary, Abo, Ryan P., primary, Li, Liang, primary, Cunningham, Julie M., primary, Sun, Zhifu, primary, Yang, Ping, primary, and Wang, Liewei, primary

Published
2023
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48. Supplementary Table 3 from Increased miR-708 Expression in NSCLC and Its Association with Poor Survival in Lung Adenocarcinoma from Never Smokers

Author

Jang, Jin Sung, primary, Jeon, Hyo-Sung, primary, Sun, Zhifu, primary, Aubry, Marie Christine, primary, Tang, Hui, primary, Park, Cheol-Hong, primary, Rakhshan, Fariborz, primary, Schultz, Debra A., primary, Kolbert, Christopher P., primary, Lupu, Ruth, primary, Park, Jae Yong, primary, Harris, Curtis C., primary, Yang, Ping, primary, and Jen, Jin, primary

Published
2023
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50. Supplementary Figure 3 from Increased miR-708 Expression in NSCLC and Its Association with Poor Survival in Lung Adenocarcinoma from Never Smokers

Author

Jang, Jin Sung, primary, Jeon, Hyo-Sung, primary, Sun, Zhifu, primary, Aubry, Marie Christine, primary, Tang, Hui, primary, Park, Cheol-Hong, primary, Rakhshan, Fariborz, primary, Schultz, Debra A., primary, Kolbert, Christopher P., primary, Lupu, Ruth, primary, Park, Jae Yong, primary, Harris, Curtis C., primary, Yang, Ping, primary, and Jen, Jin, primary

Published
2023
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