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UNLABELLED: Gastrointestinal diseases are the most frequently reported clinical problems in captive common marmosets (Callithrix jacchus), often affecting the health and welfare of the animal and ultimately their use as a research subject. The microbiome has been shown to be intimately connected to diet and gastrointestinal health. Here, we use shotgun metagenomics and untargeted metabolomics in fecal samples of common marmosets collected before, during, and after a dietary transition from a biscuit to a gel diet. The overall health of marmosets, measured as weight recovery and reproductive outcome, improved after the diet transition. Moreover, each marmoset pair had significant shifts in the microbiome and metabolome after the diet transition. In general, we saw a decrease in Escherichia coli and Prevotella species and an increase in Bifidobacterium species. Untargeted metabolic profiles indicated that polyamine levels, specifically cadaverine and putrescine, were high after diet transition, suggesting either an increase in excretion or a decrease in intestinal reabsorption at the intestinal level. In conclusion, our data suggest that Bifidobacterium species could potentially be useful as probiotic supplements to the laboratory marmoset diet. Future studies with a larger sample size will be beneficial to show that this is consistent with the diet change. IMPORTANCE: Appropriate diet and health of the common marmoset in captivity are essential both for the welfare of the animal and to improve experimental outcomes. Our study shows that a gel diet compared to a biscuit diet improves the health of a marmoset colony, is linked to increases in Bifidobacterium species, and increases the removal of molecules associated with disease. The diet transition had an influence on the molecular changes at both the pair and time point group levels, but only at the pair level for the microbial changes. It appears to be more important which genes and functions present changed rather than specific microbes. Further studies are needed to identify specific components that should be considered when choosing an appropriate diet and additional supplementary foods, as well as to validate the benefits of providing probiotics. Probiotics containing Bifidobacterium species appear to be useful as probiotic supplements to the laboratory marmoset diet, but additional work is needed to validate these findings.

Introduction: Veterinary clinical microbiology laboratories play a key role in antimicrobial stewardship, surveillance of antimicrobial resistance and prevention of healthcare associated-infections. However, there is a shortage of international harmonized guidelines covering all steps of veterinary bacterial culture from sample receipt to reporting. Methods: In order to gain insights, the European Network for Optimization of Veterinary Antimicrobial Treatment (ENOVAT) designed an online survey focused on the practices and interpretive criteria used for bacterial culture and identification (C&ID), and antimicrobial susceptibility testing (AST) of animal bacterial pathogens. Results: A total of 241 microbiology laboratories in 34 European countries completed the survey, representing a mixture of academic (37.6%), governmental (27.4%), and private (26.5%) laboratories. The C&ID turnaround varied from 1 to 2 days (77.8%) to 3-5 days (20%), and 6-8 days (1.6%), with similar timeframes for AST. Individual biochemical tests and analytical profile index (API) biochemical test kits or similar were the most frequent tools used for bacterial identification (77% and 56.2%, respectively), followed by PCR (46.6%) and MALDI-TOF MS (43.3%). For AST, Kirby-Bauer disk diffusion (DD) and minimum inhibitory concentration (MIC) determination were conducted by 43.8% and 32.6% of laboratories, respectively, with a combination of EUCAST and CLSI clinical breakpoints (CBPs) preferred for interpretation of the DD (41.2%) and MIC (47.6%) results. In the absence of specific CBPs, laboratories used human CBPs (53.3%) or veterinary CBPs representing another body site, organism or animal species (51.5%). Importantly, most laboratories (47.9%) only report the qualitative interpretation of the result (S, R, and I). As regards testing for AMR mechanisms, 48.5% and 46.7% of laboratories routinely screened isolates for methicillin resistance and ESBL production, respectively. Notably, selective reporting of AST results (i.e. excluding highest priority critically important antimicrobials from AST reports) was adopted by 39.5% of laboratories despite a similar proportion not taking any approach (37.6%) to guide clinicians towards narrower-spectrum or first-line antibiotics. Discussion: In conclusion, we identified a broad variety of methodologies and interpretative criteria used for C&ID and AST in European veterinary microbiological diagnostic laboratories. The observed gaps in veterinary microbiology practices emphasize a need to improve and harmonize professional training, innovation, bacterial culture methods and interpretation, AMR surveillance and reporting strategies. [ABSTRACT FROM AUTHOR]

Antimicrobial stewardship is one of the cornerstones in the battle against antimicrobial resistance. Restrictive legislation aims to foster antimicrobial stewardship. Prophylactic prescription of antimicrobials is still a widespread practice in canine breeding management to prevent suspected infectious infertility. The aim of this study was to evaluate the efficacy of restrictive legislation in Germany (Veterinary Home Pharmacy Ordinance, TÄHAV) based on resistance profiles of common bacterial isolates from the vaginal tract by comparing the resistance situation before (time frame (TF1)) and after (TF2) its amendment. In total, results of 13,373 antimicrobial susceptibility tests of bacterial isolates of Escherichia coli (n = 5209), beta-hemolytic streptococci (n = 4010), and Staphylococcus (Staph.) intermedius group (n = 4154) derived from canine vaginal swabs were assessed. Antimicrobial susceptibility testing was performed on pure cultures using the broth microdilution method. Susceptibility to selected antimicrobials was evaluated. Susceptibility of Escherichia coli generally increased within TF2 with, however, a significant increase in the number of non-susceptible isolates to cefalexin (p < 0.0001). Beta-hemolytic streptococci exhibited good susceptibility to most antimicrobials. Susceptibility developed ambivalently within the Staphylococcus intermedius group. Despite an overall positive effect of increased susceptibility, an increase in non-susceptibility to single antimicrobials was detected, possibly indicating a need for refinement of the legislation. [ABSTRACT FROM AUTHOR]

Hospital-Associated Infections (HAIs) are caused by microorganisms that are not present before patients are admitted to healthcare facilities, and usually have multidrug resistance profiles. There is ample information and active research in human medicine to create preventive and control measures, but there have been fewer efforts in animal medicine, and studies in only a few countries have been examining how this problem presents in veterinary hospitals. In Mexico, there have been no studies on the presence of multidrug-resistant bacteria associated with HAIs in veterinary medicine. Therefore, the surfaces of inanimate objects and equipment in a university veterinary hospital for small species were sampled to search for bacteria with the potential to cause HAIs. After isolation, molecular identification and multidrug resistance tests were carried out. One bacterial strain was found to be resistant to carbapenems, third-generation cephalosporines, and penicillin/β-lactamase inhibitors. Additionally, other susceptible bacterial genera were identified as potential nosocomial pathogens in humans and animals. The presence of multidrug-resistant bacteria was confirmed. Further studies should be conducted to determine the isolate's origin and its relationship with reported human clinical genotypes. This type of study highlights the importance of epidemiological surveillance and the need to not underestimate the potential risk posed by multidrug-resistant microorganisms. [ABSTRACT FROM AUTHOR]

Antimicrobial resistance (AMR) is a critical One Health concern with implications for human, animal, plant, and environmental health. Antimicrobial susceptibility testing (AST), antimicrobial resistance testing (ART), and surveillance practices must be harmonized across One Health sectors to ensure consistent detection and reporting practices. Veterinary diagnostic laboratory stewardship, clinical outcomes studies, and training for current and future generations of veterinarians and laboratorians are necessary to minimize the spread of AMR and move veterinary medicine forward into an age of better antimicrobial use practices. The purpose of this article is to describe current knowledge gaps present in the literature surrounding ART, AST, and clinical or surveillance applications of these methods and to suggest areas where AMR research can fill these knowledge gaps. The related Currents in One Health by Maddock et al, JAVMA, March 2024, addresses current limitations to the use of genotypic ART methods in clinical veterinary practice. [ABSTRACT FROM AUTHOR]

ABSTRACT Gastrointestinal diseases are the most frequently reported clinical problems in captive common marmosets (Callithrix jacchus), often affecting the health and welfare of the animal and ultimately their use as a research subject. The microbiome has been shown to be intimately connected to diet and gastrointestinal health. Here, we use shotgun metagenomics and untargeted metabolomics in fecal samples of common marmosets collected before, during, and after a dietary transition from a biscuit to a gel diet. The overall health of marmosets, measured as weight recovery and reproductive outcome, improved after the diet transition. Moreover, each marmoset pair had significant shifts in the microbiome and metabolome after the diet transition. In general, we saw a decrease in Escherichia coli and Prevotella species and an increase in Bifidobacterium species. Untargeted metabolic profiles indicated that polyamine levels, specifically cadaverine and putrescine, were high after diet transition, suggesting either an increase in excretion or a decrease in intestinal reabsorption at the intestinal level. In conclusion, our data suggest that Bifidobacterium species could potentially be useful as probiotic supplements to the laboratory marmoset diet. Future studies with a larger sample size will be beneficial to show that this is consistent with the diet change.IMPORTANCEAppropriate diet and health of the common marmoset in captivity are essential both for the welfare of the animal and to improve experimental outcomes. Our study shows that a gel diet compared to a biscuit diet improves the health of a marmoset colony, is linked to increases in Bifidobacterium species, and increases the removal of molecules associated with disease. The diet transition had an influence on the molecular changes at both the pair and time point group levels, but only at the pair level for the microbial changes. It appears to be more important which genes and functions present changed rather than specific microbes. Further studies are needed to identify specific components that should be considered when choosing an appropriate diet and additional supplementary foods, as well as to validate the benefits of providing probiotics. Probiotics containing Bifidobacterium species appear to be useful as probiotic supplements to the laboratory marmoset diet, but additional work is needed to validate these findings.

Antimicrobial stewardship is one of the cornerstones in the battle against antimicrobial resistance. Restrictive legislation aims to foster antimicrobial stewardship. Prophylactic prescription of antimicrobials is still a widespread practice in canine breeding management to prevent suspected infectious infertility. The aim of this study was to evaluate the efficacy of restrictive legislation in Germany (Veterinary Home Pharmacy Ordinance, TÄHAV) based on resistance profiles of common bacterial isolates from the vaginal tract by comparing the resistance situation before (time frame (TF1)) and after (TF2) its amendment. In total, results of 13,373 antimicrobial susceptibility tests of bacterial isolates of Escherichia coli (n = 5209), beta-hemolytic streptococci (n = 4010), and Staphylococcus (Staph.) intermedius group (n = 4154) derived from canine vaginal swabs were assessed. Antimicrobial susceptibility testing was performed on pure cultures using the broth microdilution method. Susceptibility to selected antimicrobials was evaluated. Susceptibility of Escherichia coli generally increased within TF2 with, however, a significant increase in the number of non-susceptible isolates to cefalexin (p < 0.0001). Beta-hemolytic streptococci exhibited good susceptibility to most antimicrobials. Susceptibility developed ambivalently within the Staphylococcus intermedius group. Despite an overall positive effect of increased susceptibility, an increase in non-susceptibility to single antimicrobials was detected, possibly indicating a need for refinement of the legislation.

This paper gives an account of the history of veterinary bacteriology including clinical veterinary bacteriology as well as the area of veterinary public health in Denmark from the 1880s to 2022. We describe key persons, including B. Bang, C.O. Jensen, K.A. Jensen and others who made important contributions to the development of these areas of microbiological expertise, and we discuss how challenges ranging from bovine tuberculosis to bacterial antimicrobial resistance have been met. Further, we describe progress in research on important bacterial pathogens both with regard to animal clinical aspects and zoonotic food‐related aspects. Finally, we describe current issues in relation to One Health and research organization. [ABSTRACT FROM AUTHOR]

Høiby N. Louis Pasteur and the birth of microbiology in Denmark. APMIS 2022. Louis Pasteur's work initiated the birth of microbiology in Denmark. Carl Julius Salomonsen was the pioneer who inspired and taught Christian Gram, Thorvald Madsen and Bernhard Bang bacteriological techniques in his annual bacteriological course which he started in 1883 at the University of Copenhagen. These pioneers developed Danish human and veterinary microbiology and became world famous. Emil Chr. Hansen developed Danish technical/industrial microbiology in the Carlsberg Laboratory and purified yeast and designed equipment for the propagation of pure yeast which was used worldwide in beer brewing. He also became world famous. The fascinating birth and development of Danish microbiology is summarized in this article, which is dedicated to the 200th birthday of Louis Pasteur, December 27, and 100th birthday of the Danish Pasteur Society, October 25, 2022. [ABSTRACT FROM AUTHOR]

Bacterial culture and susceptibility are widely used in veterinary medicine to determine the specific bacteria causing infection as well as aid in appropriate antimicrobial selection. Previous studies have shown variable results with culture and susceptibility depending on the laboratory and methodology used. Samples from dogs with superficial pyoderma were obtained to make a homogeneous solution of bacteria. Sample acquisition from this solution was randomized and submitted to four veterinary laboratories for microbial identification and sensitivity. There was fair agreement among the laboratories in identification of a Staphylococcus spp. as well as fair agreement among the laboratories on the same Staphylococcus sp. Very good agreement was noted on identification of methicillin-resistant Staphylococcus spp. Additionally, good to very good agreement was noted on all antimicrobials that were tested across all four laboratories. A difference in turnaround time for sample processing was observed between the laboratories in the present study. Overall, there was mild variability among the laboratory results in this study. [ABSTRACT FROM AUTHOR]

Ptyas korros or Indo-China Rat Snake is one of the snakes that are commonly hunted in Indonesia. This study aimed to identify Spirometra sp. on P. korros in Sidoarjo. A total of 18 snakes were collected within 3 months. Identification of Spirometra sp. was done using a native method, Semichen Acetic Carmine, and HE staining. As a results, 8 (44.4%) of 18 samples showed positive infection with Spirometra sp. The results of this study indicate the presence of spargana in P. korros in Sidoarjo and no adult Spirometra sp. was found. [ABSTRACT FROM AUTHOR]

ABSTRACTHuman cutaneous squamous cell carcinomas (SCCs) and actinic keratoses (AK) display microbial dysbiosis with an enrichment of staphylococcal species, which have been implicated in AK and SCC progression. SCCs are common in both felines and canines and are often diagnosed at late stages leading to high disease morbidity and mortality rates. Although recent studies support the involvement of the skin microbiome in AK and SCC progression in humans, there is no knowledge of this in companion animals. Here, we provide microbiome data for SCC in cats and dogs using culture-independent molecular profiling and show a significant decrease in microbial alpha diversity on SCC lesions compared to normal skin (P ≤ 0.05). Similar to human skin cancer, SCC samples had an elevated abundance of staphylococci relative to normal skin—50% (6/12) had >50% staphylococci, as did 16% (4/25) of perilesional samples. Analysis of Staphylococcus at the species level revealed an enrichment of the pathogenic species Staphylococcus felis in cat SCC samples, a higher prevalence of Staphylococcus pseudintermedius in dogs, and a higher abundance of Staphylococcus aureus compared to normal skin in both companion animals. Additionally, a comparison of previously published human SCC and perilesional samples against the present pet samples revealed that Staphylococcus was the most prevalent genera across human and companion animals for both sample types. Similarities between the microbial profile of human and cat/dog SCC lesions should facilitate future skin cancer research.IMPORTANCEThe progression of precancerous actinic keratosis lesions (AK) to cutaneous squamous cell carcinoma (SCC) is poorly understood in humans and companion animals, despite causing a significant burden of disease. Recent studies have revealed that the microbiota may play a significant role in disease progression. Staphylococcus aureus has been found in high abundance on AK and SCC lesions, where it secretes DNA-damaging toxins, which could potentiate tumorigenesis. Currently, a suitable animal model to investigate this relationship is lacking. Thus, we examined the microbiome of cutaneous SCC in pets, revealing similarities to humans, with increased staphylococci and reduced commensals on SCC lesions and peri-lesional skin compared to normal skin. Two genera that were in abundance in SCC samples have also been found in human oral SCC lesions. These findings suggest the potential suitability of pets as a model for studying microbiome-related skin cancer progression.

ABSTRACT Analysis of flanking region sequences can be useful when comparing mobile prokaryotic sequences from different bacterial isolates or metagenomes. Here, we report a new bioinformatics tool, a pipeline called Flankophile, which can analyze flanking regions and sequence variants. The main feature of Flankophile is that it visualizes flanking region synteny and sequence variants in publication-ready plots with distance trees, gene annotations, and metadata. Antimicrobial resistance is a significant threat to human health, and surveillance of the spread of antimicrobial resistance is essential. The study of acquired antimicrobial resistance genes (ARGs) is an obvious use case for Flankophile due to the typically diverse genetic context of the genes. Flanking sequences offer a stronger epidemiological signal than the gene sequence alone. To demonstrate Flankophile, we applied it to 2,057 sequenced bacterial isolates and 273 metagenomes from humans and pigs in Denmark and compared the ARGs found in each host reservoir. Gene variant results showed that just ca. 4% of all unique ARG variants found (N = 1,052) were detected in samples from both humans and pigs. Flanking region analysis of ARG variants frequently detected in this study showed multiple examples of genes where the entire 3,000-base pair flanking region was identical in samples from both hosts but also cases where no overlap was observed, and the clustering showed a complete separation of the samples from pigs and the samples from humans. IMPORTANCE The Flankophile pipeline enables the analysis and visualization of flanking regions of prokaryotic sequences of interest on large data sets in one step and in a consistent manner. A specific tool for flanking region analysis with automated visualization has not been developed before, and Flankophile will make flanking region analysis easier and accessible to more people. Flankophile will be especially useful in the field of genomic epidemiology of acquired antimicrobial resistance genes. Here, information from flanking region sequences can be instrumental in rejecting or supporting the possibility of a recent common source of the same resistance gene found in different samples.

Simple Summary: Digital dermatitis (DD) is a painful infection of the skin at the coronary band of the claws, a major cause of lameness in dairy cattle and associated with several Treponema species (spp.). Clinical inspection of the feet is the common way to diagnose the disease, but is laborious. There are no simple diagnostic tools, which makes it difficult to monitor DD prevalence in a herd. Therefore, we developed, validated and implemented a Treponema antibody detecting ELISA for use in bulk tank milk. A weak relation between clinical scores of claws with the results of ELISA in individual milk samples was found. When using bulk milk, a clear increase in the ELISA response was observed when mean clinical scores of the claws in the herd were higher. Using the results of the Treponema ELISA in bulk milk, herds with a low or high number of cattle with DD could be distinguished. This ELISA is now being used in a claw health monitoring program for dairy cattle in the Netherlands. This helps farmers to obtain insight into the level of DD in their herd and is helpful to improve claw health in dairy cattle. Digital dermatitis (DD) is a painful inflammation at the coronary band of the claws, a major cause of lameness in cattle and associated with infections with several Treponema spp. Clinical inspection of the feet is the best way to diagnose DD, but this is laborious and stressful for cattle. A simple diagnostic tool was developed to monitor DD prevalence at the herd level. An antibody ELISA based on antigens from four different Treponema spp. has been developed and validated in two field studies. In one study, bulk milk and individual milk samples of seven dairy herds, of which clinical claw scores were obtained, were tested. In the second study, bulk milk was tested from 110 herds of which clinical scores were obtained. A weak correlation between clinical scores of cows and the ELISA results in individual milk samples was observed. The ELISA response in bulk milk was higher in herds with higher mean clinical scores. Using the ELISA results in bulk milk, herds with a low or high proportion of cattle with DD lesions could be distinguished. This ELISA is useful to obtain insight into the DD status at the herd level, and is nowadays being used in a claw health monitoring program for dairy cattle in the Netherlands. [ABSTRACT FROM AUTHOR]

The article presents the discussion on research focusing the taxonomy of Afrotropical Asilidae contributing to the taxonomy of Mecoptera and collected impressive numbers of other Diptera and Hemiptera. Topics include Jason Londt’s passion for entomology and collecting being clearly be seen in the number of specimens collected during the time at the KZN Museum; and adding specimens to the collection, which is a reflection of his unwavering dedication to dipterology.

The ocular flora can be affected by many factors such as the environment in which the horse lives, climate, geography, etc. The aim of this study was to determine the bacterial and fungal ocular flora and to define the determined bacterial and fungal species in healthy racehorses that race at Diyarbakir Hippodrome and do not race in farms close to the Hippodrome. The study group consisted of 112 healthy eyes of 28 Thoroughbred Arabian and British horses of different ages and genders, which raced in the Diyarbakir Hippodrome and 28 did not race in the farms near the Hippodrome. Bacterial and fungal agents in the conjunctival flora were isolated and identified by swabbing with sterile swaps from the medial canthus of healthy eyes and transported to Dicle University Veterinary Faculty Microbiology Laboratory in a cold chain. Bacteriological growth was 94.64%, fungal growth was 28.57% in the hippodrome group, bacteriological growth was 100% in the farm group, and fungal growth (14.29%) was detected. It was determined that of the evaluated conjunctival swab samples, 87.79% of isolated and identified bacteria were Gram-positive in the hippodrome group, 12.21% were Gram-negative, 82.56% were Gram-positive and 17.43% were Gram-negative in the farm group. Staphylococcus spp. formed the majority of the microflora in both groups. As a result, it is thought that it will help to determine the conjunctival flora at regular intervals and to determine the treatment to be followed in case of possible corneal or eye damage, and vision loss due to corneal damage can be prevented with early intervention. [ABSTRACT FROM AUTHOR]

Faecal microbiota transplantation (FMT) is a therapeutic approach that involves the transfer of faecal microbiota from a healthy donor to a recipient, aiming to restore a balanced microbial community in the recipient's gut. FMT has achieved significant success in human medicine, particularly in the treatment of Clostridioides difficile infection (CDI) and other gastrointestinal disorders. While FMT has been utilised in veterinary medicine for decades, its formal recognition in human medicine has influenced its adoption and advancement. In this mini review article, we provide a concise analysis of the mechanisms underlying FMT and trace the historical development of transplantation procedures in veterinary medicine. We explore the current applications of FMT in companion animals and livestock, highlighting its efficacy in managing gastrointestinal disorders. Additionally, we discuss the synergistic role of metagenomics, metabolomics, and artificial intelligence (AI) in shaping modern FMT practice, emphasizing their potential for improving FMT efficacy, personalized treatment strategies, and diagnostic approaches in veterinary medicine. By reviewing pertinent scientific literature, this comprehensive review explores the historical perspective, current state, and potential impact of FMT in the field of veterinary medicine. [ABSTRACT FROM AUTHOR]

The experiment was conducted during 5th September 17th October, 2022 (42 Days) in the Department of Veterinary Microbiology and Immunology, College of Veterinary Sciences and Animal Husbandry, Central Agricultural University, Selesih, Aizawl, Mizoram, India to study the effect of feeding fermented wheat bran on blood biochemical parameter and carcass characteristics of broiler birds. Two hundred (200) numbers of day-old chicks were divided into five dietary groups with four replicates in each group. Each replicate contained 10 birds. Five dietary treatments: basal diet (Control); basal diet with Bacitracin methylene disalicylate (AGP) @ 0.5 g kg-1 of feed; basal diet with inclusion of 10% wheat bran; basal diet with inclusion of 10% fermented wheat bran; and basal diet with inclusion 15% fermented wheat bran. The feed and water were given at free choice to the birds. Fermented wheat bran was prepared by inoculating Lactobacillus fermentum using Solid-state fermentation technology. Blood biochemical parameters like total protein, albumin, globulin, triglyceride, cholesterol, LDL and HDL did not differ significantly among the experimental groups. However, the glucose level showed significantly higher (p<0.01) at 28th and 42nd days old birds, whereas HDL was significantly (p<0.05) higher at 42nd day in AGP, FWB-10 and FWB-15 group as compared to control and WB-10 group at old birds. Therefore, it was concluded that 15% fermented wheat bran can be incorporated in the diet of broiler chickens without any adverse affect. [ABSTRACT FROM AUTHOR]

The infectious bursal diseases virus (IBDV) polymerase, VP1 protein, is responsible for transcription, initial translation and viral genomic replication. Knowledge about the new kind of post-translational modification of VP1 supports identification of novel drugs against the virus. Because the arginine residue is known to be methylated by protein arginine methyltransferase (PRMT) enzyme, we investigated whether IBDV VP1 is a substrate for known PRMTs. In this study, we show that VP1 is specifically associated with and methylated by PRMT5 at the arginine 426 (R426) residue. IBDV infection causes the accumulation of PRMT5 in the cytoplasm, which colocalizes with VP1 as a punctate structure. In addition, ectopic expression of PRMT5 significantly enhances the viral replication. In the presence of PMRT5, enzyme inhibitor and knockout of PRMT5 remarkably decreased viral replication. The polymerase activity of VP1 was severely damaged when R426 mutated to alanine, resulting in impaired viral replication. Our study reports a novel form of post-translational modification of VP1, which supports its polymerase function to facilitate the viral replication. IMPORTANCE Post-translational modification of infectious bursal disease virus (IBDV) VP1 is important for the regulation of its polymerase activity. Investigation of the significance of specific modification of VP1 can lead to better understanding of viral replication and can probably also help in identifying novel targets for antiviral compounds. Our work demonstrates the molecular mechanism of VP1 methylation mediated by PRMT5, which is critical for viral polymerase activity, as well as viral replication. Our study expands a novel insight into the function of arginine methylation of VP1, which might be useful for limiting the replication of IBDV. [ABSTRACT FROM AUTHOR]

Caseous lymphadenitis (CLA), an infectious disease caused by Corynebacterium pseudotuberculosis in goats and sheep, is highly prevalent worldwide and is characterized by economic losses in small ruminant production. Currently available techniques for clinical and laboratory diagnosis of the disease lack market availability and/or sensitivity, and therefore, infected animals can remain in the herd, serving as a source of infection for other animals. The present study aimed to verify hematological and clinical biochemistry changes in goats naturally infected by C. pseudotuberculosis. One hundred seventy-three Canindé goats were included in this study, from which blood samples and caseous lesions were collected. The animals were classified as uninfected, asymptomatic, and symptomatic according to microbiological isolation and serological assays. A high dissemination of the infection was observed in the herd, with 86.13% of positive animals, being 74.57% asymptomatic and 11.56% symptomatic. In the hemogram and clinical biochemistry analyses, the only statistical difference found was a higher level of serum urea in asymptomatic individuals than in non-infected animals. In addition, this study points to the possibility of chronic CLA being potentially reflected in hepatic and renal biochemical markers. [ABSTRACT FROM AUTHOR]

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Corneal ulcers or ulcerative keratitis is the loss of continuity of corneal epithelium leading to exposure of corneal stroma. It is a highly painful condition in dogs. The common aetiological agents responsible for this condition are bacteria and for treatment, antibiotics are widely used. Indiscriminate and prolonged use of antibiotics can cause antimicrobial resistance (AMR) in bacteria. The present communication deals with the isolation of bacteria from corneal ulcers in dogs and the assessment of quinolone resistance. A total of 15 corneal swab samples were collected from dogs suffering from corneal ulcers, presented to the Department of Veterinary Surgery and Radiology, Teaching Veterinary Clinical Complex, College of Veterinary and Animal Sciences, Mannuthy. They were inoculated on to brain heart infusion agar as well as blood agar and incubated at 37 °C for 24 h for the isolation of aerobic bacteria. Eighteen isolates obtained were then subjected to antibiotic susceptibility test by disc diffusion method using the quinolone group of antibiotics, viz. ciprofloxacin, enrofloxacin, ofloxacin and moxifloxacin. Majority of the isolates exhibited varying resistance to these antibiotics. Polymerase chain reaction was performed to amplify gyrA gene, which is reported to be one of the reasons responsible for quinolone resistance with respect to its mutation. Seven out of the 18 isolates amplified gyrA gene. The amplicon obtained corresponding to a representative sample, which was found resistant by disc diffusion method was sequenced and a single point mutation was detected. [ABSTRACT FROM AUTHOR]

The aim of this study was to identify the primary bacteria associated with clinical mastitis in dairy cows and to assess the antimicrobial resistance pattern of the commonest isolate using phenotypic methods. The milk samples were collected from 83 domesticated dairy cows suffering from clinical mastitis (CM), from an organised dairy farm as well as cows presented with CM at the University Veterinary Hospital (UVH), Mannuthy, Thrissur, Kerala. Microbiological analysis, using morphological, cultural and biochemical properties as well as molecular identification using polymerase chain reaction (PCR) revealed that coagulase-negative staphylococci (CNS) were the most predominant (40.31 per cent) bacteria, followed by Staphylococcus aureus (32.83 per cent), Micrococci spp. (11.94 per cent), Klebsiella spp. (7.46 per cent) Escherichia coli (4.48 per cent) and Streptococci (2.98 per cent). The majority of the bacteria were resistant to more than one class of antimicrobials (aminoglycosides, β lactams, fluoroquinolones or tetracyclines). Furthermore, our findings revealed that the CNS is highly resistant to β-lactam family of antibiotics and that CNS may play a significant role in clinical mastitis of dairy cows. [ABSTRACT FROM AUTHOR]

Digital dermatitis (DD) is a painful inflammation at the coronary band of the claws, a major cause of lameness in cattle and associated with infections with several Treponema spp. Clinical inspection of the feet is the best way to diagnose DD, but this is laborious and stressful for cattle. A simple diagnostic tool was developed to monitor DD prevalence at the herd level. An antibody ELISA based on antigens from four different Treponema spp. has been developed and validated in two field studies. In one study, bulk milk and individual milk samples of seven dairy herds, of which clinical claw scores were obtained, were tested. In the second study, bulk milk was tested from 110 herds of which clinical scores were obtained. A weak correlation between clinical scores of cows and the ELISA results in individual milk samples was observed. The ELISA response in bulk milk was higher in herds with higher mean clinical scores. Using the ELISA results in bulk milk, herds with a low or high proportion of cattle with DD lesions could be distinguished. This ELISA is useful to obtain insight into the DD status at the herd level, and is nowadays being used in a claw health monitoring program for dairy cattle in the Netherlands.

Background: The importance of zoonotic fungal infections is increasing today and continues to increase due to changing living conditions. Methods: Between 2012 and 2019 evaluated of fungi species isolated from 51 (20.07%) of 254 samples from 10 different animal species (dog, cat, horse, cow, goat, sheep, camel, penguin, bird, rabbit) with 10 different sample types Thus, the risk of those with zoonotic characteristics was assessed. Despite fungal hyphae and/or spores were seen in 63 (24.8%) of 254 samples in the direct microscopic examination, the isolation of fungi on Sabouraud dextrose agar occurred in only 51 of these samples (20.07%). Conclusion: Of all the 51 samples, 9 (17.64%) samples had more than one fungal agent. The predominant isolate was Aspergillus spp. with an isolation rate of 24 (47.05%), followed by Malassezia spp. 11 (21.56%), Alternaria spp. 6 (11.76%), Penicillium spp. and various yeasts 4 (7.84%), Microsporum spp. 3 (5.88%), Candida spp., Mucor spp., Geotrichum spp. 2 (3.92%) and Trichophyton spp. and Rhizopus spp. 1 (1.96%). Besides, samples were examined for the presence of bacteria and one or more of the bacteria were also isolated from 14 (27.4%) of 51 samples. This assessment in the veterinary microbiology laboratory has shown that the isolated fungi agents pose a significant risk of infection for people who take care of these animals or consume animal products and pet owners. [ABSTRACT FROM AUTHOR]

The description of new taxa and nomenclature updates to currently known taxa from aquatic animal species continues. After a review of the literature from 2022 and 2023, multiple lists of bacteria, including members of Phylum Planctomycetota , were compiled. As with the previous review, most bacteria are oxidase-positive Gram-negative bacilli with familiar families including new taxa in Aeromonadaceae , Flavobacteriaceae , and Vibrionaceae . A number of Gram-positive bacilli are described including new taxa in the Nocardioides , Paenibacillus , and Streptomyces genera. Two anaerobic species are listed, and one new member of Family Planctomycetaceae is noted. Revised taxa are briefly mentioned. The majority of new and revised taxa are isolated from healthy aquatic animals, and therefore, the role of these new bacteria in health and disease is unknown. Bacteria with pathogenic association and potential production of bioactive substances are highlighted., Competing Interests: The authors declare no conflict of interest.

With the proliferation of abundant bacterial genomic data comes the recognition of new organisms as well as a better understanding of the relatedness of known bacteria. Recognizing the associated taxonomic changes enhances communication and understanding about the significance of novel organisms and deeper understanding of known pathogens. This review addresses the addition of multiple gastrointestinal bacteria that form the normal microbiota in a variety of animals including honeybees as well as novel bacteria from domestic animals including an alpha-hemolytic Streptococcus species from guinea pigs, two Moraxella spp. from cows and goats, a new Capnocytophaga species from cats, a thermophilic Campylobacter species from pigs, and the new Exercitatus genus in Family Pasteurellaceae . Several revisions to the nomenclature also appeared in 2023 including the change of Clostridium spiroforme, which causes anorexia and diarrhea in domestic rabbits, to Thomasclavelia spiroformis comb. nov. and Mannheimia ovis to Mannheimia pernigra .

Continued investigation into the bacteria associated with non-domestic animals provides important information for recognizing normal flora, assessing the health status of these unique species of animals, and identifying new or emerging pathogens of concern. In this summary of novel taxa and taxonomic revisions, considerable additions have been made toward understanding fecal and mucosal flora in multiple wild animal species. In addition, novel pathogenic bacteria are discussed, including multiple Chlamydia spp. causing disease in a hawk and crocodile, two Corynebacterium spp. causing oral lesions in penguins and a lesser-known genus, Mergibacter within Family Pasteurellaceae , causing disease in multiple wild bird species. Finally, a few revisions to bacteria isolated from normal non-domestic animal body sites are mentioned., Competing Interests: The authors declare no conflict of interest.

ABSTRACT Meteorological phenomena such as warm summer temperatures and increased numbers of sunlight hours have repeatedly been hypothesized to be associated with infectious diseases and an increased prescription of antimicrobial compounds in Danish aquaculture. To address this hypothesis, we prepared statistical models incorporating aquaculture production data from Danish Aquaculture, detailed records on prescription of antimicrobials from the Danish VETSTAT program, and meteorological data from 2001 to 2019 from the Danish Meteorological Institute. Separate series of models were made and refined for land-based and marine production, respectively. For both production forms, the models identify summer sunlight hours as having a significant influence on antimicrobial use. In addition to summer sunlight, spring sunlight and water temperature were integral, although not statistically significant, parameters when modeling antimicrobial use in marine production. Although the extensive availability and accuracy of relevant data are associated with Danish production, we believe the results allow for more general conclusions on the influence of meteorological parameters on outbreaks of bacterial pathogens in international aquaculture. Such insights could have a substantial impact on prophylactic strategies, fish husbandry, and our understanding of how increasing temperatures may affect future antimicrobial usage in the global aquaculture industry. IMPORTANCE Global aquaculture production has been rapidly increasing for decades and is set to play a pivotal role in feeding a growing human population. Along with the growth in aquaculture production, the annual global use of antimicrobials is estimated to increase by one-third between 2017 and 2030. Using detailed antimicrobial prescription records as a proxy for outbreaks, we were able to evaluate the effects of a variety of meteorological parameters through statistical modeling. Our results lend scientific support to informal observations from the industry, but more importantly, this study provides novel, essential information on the importance of abiotic factors that can, in turn, lead to improved prophylactic efforts and thus help to reduce antimicrobial use in global aquaculture.

ABSTRACT Reptarenaviruses cause boid inclusion body disease (BIBD), a potentially fatal disease, occurring in captive constrictor snakes boas and pythons worldwide. Classical BIBD, characterized by the formation of pathognomonic cytoplasmic inclusion bodies (IBs), occurs mainly in boas, whereas in pythons, for example, reptarenavirus infection most often manifests as central nervous system signs with limited IB formation. The natural hosts of reptarenaviruses are unknown, although free-ranging/wild constrictor snakes are among the suspects. Here, we report BIBD with reptarenavirus infection in indigenous captive and wild boid snakes in Costa Rica using histology, immunohistology, transmission electron microscopy, and next-generation sequencing (NGS). The snakes studied represented diagnostic postmortem cases of captive and wild-caught snakes since 1989. The results from NGS on archival paraffin blocks confirm that reptarenaviruses were already present in wild boa constrictors in Costa Rica in the 1980s. Continuous sequences that were de novo assembled from the low-quality RNA obtained from paraffin-embedded tissue allowed the identification of a distinct pair of reptarenavirus S and L segments in all studied animals; in most cases, reference assembly could recover almost complete segments. Sampling of three prospective cases in 2018 allowed an examination of fresh blood or tissues and resulted in the identification of additional reptarenavirus segments and hartmanivirus coinfection. Our results show that BIBD is not only a disease of captive snakes but also occurs in indigenous wild constrictor snakes in Costa Rica, suggesting boa constrictors to play a role in natural reptarenavirus circulation. IMPORTANCE The literature describes cases of boid inclusion body disease (BIBD) in captive snakes since the 1970s, and in the 2010s, others and ourselves identified reptarenaviruses as the causative agent. BIBD affects captive snakes globally, but the origin and the natural host of reptarenaviruses remain unknown. In this report, we show BIBD and reptarenavirus infections in two native Costa Rican constrictor snake species, and by studying archival samples, we show that both the viruses and the disease have been present in free-ranging/wild snakes in Costa Rica at least since the 1980s. The diagnosis of BIBD in wild boa constrictors suggests that this species plays a role in the circulation of reptarenaviruses. Additional sample collection and analysis would help to clarify this role further and the possibility of, e.g., vector transmission from an arthropod host.

Orangutans are the only great apes that still survive in the Southeast Asian Region. However, their population in the wild habitat continues to decline, with estimates indicating a 50% decreased over the last 60 years. There is limited microbiological data on the antibiotic resistance of Klebsiella sp. in the feces of Bornean Orangutan (Pongo. pygmaeus). This study aimed to identify the presence of Klebsiella sp. and assess its resistance pattern to various antibiotics in the feces of Bornean Orangutans. The research involved isolation, identification, and antibiotic resistance testing. Results showed that three isolates (37.5%) were positive for Klebsiella sp. Sensitivity test revealed two distinct resistance patterns among Klebsiella sp. isolates from the feces of healthy P. pygmaeus in Taman Safari Indonesia, Bogor. These isolates exhibited resistance to β-lactam antibiotics but remained sensitive to aminoglycoside, tetracycline, and fluoroquinolone antibiotics. [ABSTRACT FROM AUTHOR]