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The growing threat of global warming on coral reefs underscores the urgency of identifying heat‐tolerant corals and discovering their adaptation mechanisms to high temperatures. Corals growing in intertidal rock pools that vary markedly in daily temperature may have improved heat tolerance. In this study, heat stress experiments were performed on scleractinian coral Porites lutea from subtidal habitat and intertidal rock pool of Weizhou Island in the northern South China Sea. Thermotolerance differences in corals from the two habitats and their mechanisms were explored through phenotype, physiological indicators, ITS2, 16S rRNA, and RNA sequencing. At the extremely high temperature of 34°C, rock pool P. lutea had a stronger heat tolerance than those in the subtidal habitat. The strong antioxidant capacity of the coral host and its microbial partners was important in the resistance of rock pool corals to high temperatures. The host of rock pool corals at 34°C had stronger immune and apoptotic regulation, downregulated host metabolism and disease‐infection‐related pathways compared to the subtidal habitat. P. lutea, in this habitat, upregulated Cladocopium C15 (Symbiodiniaceae) photosynthetic efficiency and photoprotection, and significantly increased bacterial diversity and coral probiotics, including ABY1, Ruegeria, and Alteromonas. These findings indicate that rock pool corals can tolerate high temperatures through the integrated response of coral holobionts. These corals may be 'touchstones' for future warming. Our research provides new insights into the complex mechanisms by which corals resist global warming and the theoretical basis for coral reef ecosystem restoration and selection of stress‐resistant coral populations. [ABSTRACT FROM AUTHOR]

Significant differences in environmental conditions between nearshore and offshore coral reefs lead to different symbiotic zooxanthellae density (ZD) of corals. From the perspective of energy supply, different ZD lead to different energy provided by the photosynthesis of zooxanthellae to the coral host. However, few studies have conducted a comparative analysis of coral trophic status (i.e., autotrophic photosynthesis of zooxanthellae and heterotrophic feeding of the host) between nearshore and offshore reefs. In this study, 70 coral samples of Favia palauensis were collected from the nearshore Sanya reefs, and offshore Xisha, Nansha reefs in the South China Sea (SCS). The ZD, δ15N of seawater particulate organic matter (δ15NPOM), host tissue (δ15Nh), zooxanthellae (δ15Nz) and the difference between δ15Nh and δ15Nz (i.e., △h−z 15N = δ15Nh−δ15Nz) were measured and statistically analyzed. The purpose is to elucidate the differences in the energy maintenance mechanisms of corals between nearshore and offshore reefs. Results show that ZD is significantly positively correlated with δ15Nz in all three reefs (p < 0.05). Corals in nearshore Sanya have higher autotrophic abilities than corals from offshore Xisha and Nansha reefs. By contrast, corals in offshore reefs are more dependent on heterotrophic feeding of the host to obtain energy. Our research demonstrate that corals can adjust their trophic status, especially improve their heterotrophic feeding intensity to meet energy needs under different environmental conditions. This dynamic adjustment of energy supply patterns is of great significance to improve coral's environmental adaptability. Plain Language Summary: Coral reefs are mainly divided into nearshore fringing reefs, barrier reefs and offshore atolls according to geographical distribution. Therein, ambient seawater in nearshore reefs are significantly affected by human activities and has relatively higher nutrient levels. In contrast, corals in offshore atolls are less affected by human activities as they are far away from the mainland, but they will be potentially affected by abnormal natural conditions. Different environmental conditions lead to significant differences in the physiological parameters of corals, such as symbiotic zooxanthellae density (ZD). From the perspective of energy supply, different ZD may lead to different energy provided by the photosynthesis of zooxanthellae to the coral host. However, few studies have conducted a comparative analysis of coral trophic status between nearshore and offshore reefs. Based on the δ15N labeling technology, we find that corals in nearshore fringing reefs have higher autotrophic abilities than corals from offshore reefs. By contrast, corals in the offshore reefs are more dependent on heterotrophic feeding of the host to obtain energy. This means that corals can adjust their trophic status to meet energy needs under different environmental conditions. This dynamic adjustment of energy supply patterns is of great significance to improve coral's environmental adaptability. Key Points: The δ15N can record coral trophic status changes between nearshore and offshore reefsCorals in nearshore reefs have higher autotrophic photosynthesis and heterotrophic energy than corals in offshore reefsCoral can independently adjust trophic status under different environmental conditions between nearshore and offshore [ABSTRACT FROM AUTHOR]

Coral skeleton δ13C is a routinely measured indicator in modern insolation change research, but the knowledge of environmental and climatic signals recorded in its seasonality during geological time is sparse. In this study, we present eight Porites coral δ13C records from the mid‐late Holocene to the present from the northern South China Sea (NSCS). Compared with the main control factors for modern δ13C changes, coral δ13C seasonality in the NSCS since the mid‐Holocene shows a long‐term decreasing trend, which is consistent with the change trend as orbital‐induced (precession) insolation seasonal amplitude. By excluding other influencing factors, we speculate that the stronger coral δ13C seasonality (18.8%) over the mid‐Holocene than modern period is attributable to the metabolic effect, which predicts the stronger coral δ13C seasonality under stronger insolation seasonality. Our study has implications for coral δ13C seasonality as a potential indicator to record past insolation information under different climatic backgrounds. Plain Language Summary: Numerous studies have documented the seasonal features of fast‐growing modern coral skeleton δ13C in response to insolation variation. The environmental and climatic signals recorded by coral δ13C seasonality in the geological period remain unclear owing to the relatively short length of observation records. Here we present monthly resolved δ13C records in seven fossil Porites corals (5.6–3.6 ka BP, before 1950 CE) and one modern Porites coral (1987–2001 CE) from the northern South China Sea (NSCS). Compared with the widely accepted prevailing control factors for modern coral δ13C, our results indicated that the stronger coral δ13C seasonality (18.8%) over the mid‐Holocene compared to the modern period is consistent with the orbital‐induced (precession) insolation changes, which indicate a declining seasonality from the mid‐Holocene to present. By excluding other influencing factors, we infer that a tendency toward higher δ13C seasonality during the mid‐Holocene was primarily driven by the metabolic fractionation caused by the enhanced insolation seasonality. This study highlighted coral δ13C seasonality as a potential indicator for recording past insolation information. Key Points: The seasonal variation of modern coral skeleton δ13C in the northern South China Sea (NSCS) is primarily controlled by solar insolationCoral δ13C seasonality in the NSCS since the mid‐Holocene shows a long‐term decreasing trendThe decrease of orbital‐induced (precession) insolation seasonal amplitude led to the declining trend of δ13C seasonality [ABSTRACT FROM AUTHOR]

Summary: Environmental conditions between the outer reef slope (ORS) and lagoon in tropical atolls are significantly different, but the variations of juvenile coral‐microbiomes in the two environments and their relationship with coral thermal acclimatization are poorly understood. We explored this issue based on local water conditions and the microbiome of juvenile corals in the ORS and lagoon in the central South China Sea. Coral‐symbiotic Symbiodiniaceae showed significant differences among coral species; Pocillopora verrucosa and Pachyseris rugosa in the ORS, and Acropora formosa in the lagoon were dominated by Durusdinium, but other corals were dominated by Cladocopium. Although A. formosa in the ORS were dominated by Cladocopium (C3u), they were dominated by Durusdinium (D1/D1a) and Cladocopium (C50) in the lagoon. Other coral species were both dominated by Cladocopium in the lagoon and ORS. The relative abundance of bacteria in the Deinococcus–Thermus was generally higher in the lagoon corals than in the ORS corals. Our study indicates that P. verrucosa, P. rugosa and Porites lutea may have high thermal tolerance based on the relatively high abundance of heat‐tolerant Durusdinium and Thermus scotoductus. Likewise, A. formosa in the lagoon may acclimatize to the thermal environment based on a high relative abundance of heat‐tolerant Durusdinium. [ABSTRACT FROM AUTHOR]