75 results on '"Huntington, B."'
Search Results
2. Enhancing the value of meat inspection records for broiler health and welfare surveillance: longitudinal detection of relational patterns
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Buzdugan, S. N., Alarcon, P., Huntington, B., Rushton, J., Blake, D. P., and Guitian, J.
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- 2021
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3. How the Global Burden of Animal Diseases links to the Global Burden of Crop Loss: a food systems perspective.
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Szyniszewska, A. M., Simpkins, K. M., Thomas, L., Beale, T., Milne, A. E., Brown, M. E., Taylor, B., Oliver, G., Bebber, D. P., Woolman, T., Mahmood, S., Murphy, C., Huntington, B., and Finegold, C.
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- 2024
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4. The application of Global Burden of Animal Diseases methodology to aquatic animal production.
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Peeler, E. J., Brun, E., Misund, B., Gilbert, W., Huntington, B., Reantaso, M., Walde, C., and Kennerley, A.
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- 2024
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5. Application of Global Burden of Animal Diseases methods at country level: experiences of the Ethiopia case study.
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Jemberu, W. T., Chaters, G., Asfaw, W., Asteraye, G. B., Amenu, K., Huntington, B., Rushton, J., and Knight-Jones, T. J. D.
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- 2024
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6. Informatics progress of the Global Burden of Animal Diseases programme towards data for One Health
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BERNARDO, T.M., primary, RUSHTON, J., additional, HUNTINGTON, B., additional, STACEY, D.A., additional, RAYMOND, K., additional, BENSASSI, N., additional, and PATTERSON, G.T., additional
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- 2023
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7. Global Burden of Animal Diseases – building a community of practice for animal health economics
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RUSHTON, J., primary, BERNARDO, T., additional, BRUCE, M., additional, BELLET, C., additional, TORGERSON, P., additional, SHAW, A.P.M., additional, HERRERO, M., additional, MARSH, T., additional, PENDELL, D., additional, PIGOTT, D., additional, STONE, M., additional, PINTO, J., additional, MESENHOWSKI, S., additional, LEYLAND, T., additional, PEYRE, M., additional, WATKINS, K., additional, KAPUR, V., additional, HAVELAAR, A., additional, GRACE, D., additional, HUNTINGTON, B., additional, and WOOD, P., additional
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- 2019
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8. Coral responses to macroalgal reduction and fisheries closure on Caribbean patch reefs
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McClanahan, T. R., Huntington, B. E., and Cokos, B.
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- 2011
9. Informatics progress of the Global Burden of Animal Diseases programme towards data for One Health.
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Raymond, K., BenSassi, N., Patterson, G. T., Huntington, B., Rushton, J., Stacey, D. A., and Bernardo, T. M.
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- 2023
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10. Establishment of a Collaborating Centre for Economics in Animal Health
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BRUN, E., primary, STEGEMAN, A., additional, STEENVELD, W., additional, HUNTINGTON, B., additional, and RUSHTON, J., additional
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- 2021
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11. Global Burden of Animal Diseases: a novel approach to understanding and managing disease in livestock and aquaculture
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BERNARDO, T.M., primary, BRUCE, M., additional, RUSHTON, J., additional, SHAW, A.P., additional, GRACE, D., additional, WIELAND, B., additional, HERRERO, M., additional, STONE, M., additional, GILBERT, W., additional, MARSH, T.L., additional, PENDELL, D., additional, HUNTINGTON, B., additional, BONDAD-REANTASO, M., additional, DEVLEESSCHAUWER, B., additional, HAVELAAR, A., additional, MESENHOWSKI, S., additional, PIGOTT, D., additional, STACEY, D., additional, TORGERSON, P., additional, and WATKINS, K., additional
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- 2021
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12. Roll-out of the global burden of animal diseases programme
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Rushton, J., Huntington, B., Gilbert, W., Herrero, W., Torgerson, P.R., Shaw, A.P.M., Bruce, M., Marsh, T.L., Pendell, D.L., Bernardo, T.M., Stacey, D., Grace, D., Watkins, K., Bondad-Reantaso, M., Devleesschauwer, B., Pigott, D.M., Stone, M., Mesenhowski, S., Rushton, J., Huntington, B., Gilbert, W., Herrero, W., Torgerson, P.R., Shaw, A.P.M., Bruce, M., Marsh, T.L., Pendell, D.L., Bernardo, T.M., Stacey, D., Grace, D., Watkins, K., Bondad-Reantaso, M., Devleesschauwer, B., Pigott, D.M., Stone, M., and Mesenhowski, S.
- Abstract
Comment
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- 2021
13. Global Burden of Animal Diseases: A novel approach to understanding and managing disease in livestock and aquaculture
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Bernardo, T.M., Bruce, M., Rushton, J., Shaw, A.P., Grace, D., Wieland, B., Herrero, M., Stone, M., Gilbert, W., Marsh, T.L., Pendell, D., Huntington, B., Bondad-Reantaso, M., Devleesschauwer, B., HAVELAAR, A., Mesenhowski, S., Pigott, D., Stacey, D., Torgerson, P., Watkins, K., Bernardo, T.M., Bruce, M., Rushton, J., Shaw, A.P., Grace, D., Wieland, B., Herrero, M., Stone, M., Gilbert, W., Marsh, T.L., Pendell, D., Huntington, B., Bondad-Reantaso, M., Devleesschauwer, B., HAVELAAR, A., Mesenhowski, S., Pigott, D., Stacey, D., Torgerson, P., and Watkins, K.
- Abstract
Les investissements réalisés en santé animale et dans les Services vétérinaires ont un impact mesurable sur la santé des personnes et de l’environnement. Le système de mesure appliqué à ces investissements doit reposer sur un référentiel de base décrivant l’impact de la santé et du bien-être animal de manière à justifier et classer par priorités les ressources allouées et à mesurer les effets des interventions. Les auteurs présentent une étude conduite dans le cadre d’une enquête scientifique destinée à identifier les problèmes et à rechercher des solutions de manière inclusive. L’étude pose la question de savoir à quoi devrait ressembler un système conçu pour mesurer l’impact sur la société des maladies animales, et quelle serait sa valeur ajoutée. En outre, l’étude est conduite de manière à être accessible à une large audience afin d’encourager cette dernière à participer aux discussions. Étant donné que les animaux d’élevage constituent une entité économique, y compris les animaux appartenant à des éleveurs pauvres, le système de mesure doit reposer sur des principes économiques. Les exploitants pratiquant une agriculture de subsistance subissent les effets négatifs des disparités entre les différentes technologies applicables à la santé animale, disparités auxquelles il est possible de remédier par le biais d’interventions associant des mesures dictées par l’offre et par la demande et en renforçant l’efficacité du soutien financier ciblé apporté par les organisations gouvernementales et non gouvernementales. Le Programme « L’impact mondial des maladies animales » (GBADs) aura pour tâche de glaner les données existantes afin de mesurer les pertes associées à la santé animale au sein de systèmes de production qui auront été soigneusement caractérisés au préalable. Grâce à l’élucidation cohérente et transparente des pertes imputables à chaque problème de santé animale, des comparaisons pertinentes pourront être effectuées concernant l’impact des maladies animales p
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- 2021
14. Species-area relationships in coral communities: evaluating mechanisms for a commonly observed pattern
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Huntington, B. E. and Lirman, D.
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- 2012
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15. Corals fail to recover at a Caribbean marine reserve despite ten years of reserve designation
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Huntington, B. E., Karnauskas, M., and Lirman, D.
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- 2011
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16. Propagation of the threatened staghorn coral Acropora cervicornis: methods to minimize the impacts of fragment collection and maximize production
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Lirman, D., Thyberg, T., Herlan, J., Hill, C., Young-Lahiff, C., Schopmeyer, S., Huntington, B., Santos, R., and Drury, C.
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- 2010
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17. Roll-out of the Global Burden of Animal Diseases programme
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Rushton, J, primary, Huntington, B, additional, Gilbert, W, additional, Herrero, M, additional, Torgerson, P R, additional, Shaw, A P M, additional, Bruce, M, additional, Marsh, T L, additional, Pendell, D L, additional, Bernardo, T M, additional, Stacey, D, additional, Grace, D, additional, Watkins, K, additional, Bondad-Reantaso, M, additional, Devleesschauwer, B, additional, Pigott, D M, additional, Stone, M, additional, and Mesenhowski, S, additional
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- 2021
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18. Global Burden of Animal Diseases: a novel approach to understanding and managing disease in livestock and aquaculture.
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Huntington, B., Bernardo, T. M., Bondad-Reantaso, M., Bruce, M., Devleesschauwer, B., Gilbert, W., Grace, D., Havelaar, A., Herrero, M., Marsh, T. L., Mesenhowski, S., Pendell, D., Pigott, D., Shaw, A. P., Stacey, D., Stone, M., Torgerson, P., Watkins, K., Wieland, B., and Rushton, J.
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- 2021
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19. Interannual and regional variability in settlement of groundfishes to protected and fished nearshore waters of Oregon, USA
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Ottmann, D, primary, Grorud-Colvert, K, additional, Huntington, B, additional, and Sponaugle, S, additional
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- 2018
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20. Co-Extrusion Layer Multiplication of Rheologically Mismatched Polymers: A Novel Processing Route
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Huang, R., primary, Silva, J., additional, Huntington, B. A., additional, Patz, J., additional, Andrade, R., additional, Harris, P. J., additional, Yin, K., additional, Cox, M., additional, Bonnecaze, R. T., additional, and Maia, J. M., additional
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- 2015
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21. Distortion of Interfaces in a Multilayer Polymer Co-extrusion Feedblock
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Huntington, B. A., primary, Chabert, E., additional, Rahal, S., additional, Patz, J., additional, Silva, J., additional, Harris, P., additional, Maia, J., additional, and Bonnecaze, R. T., additional
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- 2013
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22. A window to the past: documenting the status of one of the last remaining ‘megapopulations’ of the threatened staghorn coral Acropora cervicornis in the Dominican Republic
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Lirman, D., primary, Bowden-kerby, A., additional, Schopmeyer, S., additional, Huntington, B., additional, Thyberg, T., additional, Gough, M., additional, Gough, T., additional, Gough, R., additional, and Gough, Y., additional
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- 2010
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23. In our own voice-family companion: reducing self-stigma of family members of persons with serious mental illness.
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Perlick DA, Nelson AH, Mattias K, Selzer J, Kalvin C, Wilber CH, Huntington B, Holman CS, and Corrigan PW
- Abstract
OBJECTIVE: This article reports preliminary findings from a novel, family peer-based intervention designed to reduce self-stigma among family members of people with serious mental illness. METHODS: A total of 158 primary caregivers of patients with schizophrenia were recruited from a large urban mental health facility (93 caregivers) or from a family and consumer advocacy organization (65 caregivers). Caregivers (N=122) who reported they perceived at least a moderate level of mental illness-related stigma were evaluated on measures of self-stigma, withdrawal, secrecy, anxiety, and social comparison and randomly assigned to receive one of two, one-session group interventions: a peer-led intervention (In Our Own Voice-Family Companion [IOOV-FC]) designed to stimulate group discussion or a clinician-led family education session, which delivered information about mental illness in a structured, didactic format. IOOV-FC consisted of playing a videotape of family members who describe their experiences coping with stigma, which was followed by a discussion led by two family peers who modeled sharing their own experiences and facilitated group sharing. RESULTS: Of 24 family members and ten consumers, 96% rated the videotape above a predetermined acceptability threshold on a 19-item scale assessing cultural sensitivity, respect for different stakeholders, relevance of content, and technical quality ([alpha]=.92). Caregivers receiving IOOV-FC with low to moderate pretreatment anxiety reported a substantial reduction in self-stigma (effect size=.50) relative to those receiving clinician-led family education (p=.017) as well as significant reductions in secrecy (p=.031). CONCLUSIONS: Peer-led group interventions may be more effective in reducing family self-stigma than clinician-led education, at least for persons reporting experiencing low to moderate anxiety levels on a standard questionnaire (Psychiatric Services 62:1456-1462, 2011). [ABSTRACT FROM AUTHOR]
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- 2011
24. Prioritization, resource allocation and utilization of decision support tools in animal health: Results of qualitative interviews with experts.
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Amenu K, Daborn C, Huntington B, Knight-Jones T, Rushton J, and Grace D
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- Animals, Decision Support Techniques, Health Priorities, Decision Making, Animal Husbandry methods, Surveys and Questionnaires, Resource Allocation
- Abstract
A follow up to an online questionnaire survey (in a kind of a sequential study design), qualitative assessment was made on the views of selected animal health experts on disease prioritization methods, resource allocation and use of decision-support tools. This was done through in-depth interviews with experts working for national or international organizations and sectors. A semi-structured question guide was formulated based on the information generated in the online questionnaire and a systematic content analysis of animal and human health manuals for disease prioritization and resource allocation. In-depth, one-on-one, online interviews on the process of disease prioritization, animal health decision-making, types of prioritization tools and aspects of improvements in the tools were conducted during March and April 2022 with 20 expert informants. Prioritization approaches reported by experts were either single criterion-based or multiple criteria-based. Experts appreciated the single-criterion-based approach (quantitative) for its objectivity in contrast to multicriteria prioritization approaches which were criticized for their subjectivity. Interviews with the experts revealed a perceived lack of quality and reliable data to inform disease prioritization, especially in smallholder livestock production systems. It was found that outputs of disease prioritization exercises do not generally directly influence resource allocation in animal health and highlighted the paucity of funding for animal health compared to other agricultural sectors. The experts considered that the available decision-support tools in animal health need improvement in terms of data visualization for interpretation, management decision making and advocacy. Further recommendations include minimizing subjective biases by increasing the availability and quality of data and improving the translation of disease prioritization outputs into actions and the resources to deliver those actions. DATA AVAILABILITY STATEMENT: The data can be obtained from the corresponding author upon request., Competing Interests: Declaration of Competing Interest A conflict of interest occurs when an individual’s objectivity is potentially compromised by a desire for financial gain, prominence, professional advancement or a successful outcome. ASJSUR Editors strive to ensure that what is published in the Journal is as balanced, objective and evidence-based as possible. Since it can be difficult to distinguish between an actual conflict of interest and a perceived conflict of interest, the Journal requires authors to disclose all and any potential conflicts of interest., (Copyright © 2024 The Authors. Published by Elsevier B.V. All rights reserved.)
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- 2024
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25. The burden of antimicrobial resistance in livestock: A framework to estimate its impact within the Global Burden of Animal Diseases programme.
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Babo Martins S, Sucena Afonso J, Fastl C, Huntington B, and Rushton J
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In addition to affecting animal health and production, antimicrobial resistance (AMR) in livestock can have far-reaching social and economic consequences, including on human health and the environment. Given the diversity of data needs and the absence of standardised methodologies, the scale of antimicrobial use (AMU) and AMR's social and economic burden on livestock is complex to gauge. Yet, quantifying this impact can be an essential input for farm-level decision-making and, more widely, for policy development, public awareness, resource allocation to interventions and research and development prioritisation, particularly in a One Health context. This work proposes a conceptual framework to guide the assessment of the burden of AMU and AMR in livestock using the Global Burden of Animal Diseases (GBADs) approach. Its development identified and mapped critical socio-economic concepts in AMU and AMR in livestock and their relationships. The Animal Health Loss Envelope (AHLE), a monetary metric that sets a boundary for overall losses from health hazards and allows an understanding of the relative importance of health problems in livestock, was used as the metric in which the concepts and data needs for the AMU and AMR assessment were anchored. The proposed framework identifies pathways for losses and data inputs needed to estimate the burden of AMU and AMR within this wider envelope of losses. These include information on health expenditure and mortality and morbidity effects related to AMR in livestock. This work highlights the need for improved health and production data collection in livestock production as an essential stepping stone to accurately producing AMU and AMR burden estimates., Competing Interests: None., (© 2024 The Authors. Published by Elsevier B.V.)
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- 2024
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26. Using priorities between human and livestock bacterial antimicrobial resistance (AMR) to identify data gaps in livestock AMR surveillance.
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Venkateswaran N, Swetschinski LR, Fastl C, Bari CD, Criscuolo NG, Mulchandani R, Zhao C, Meštrović T, Ikuta KS, Martins SB, Coyne LA, Afonso JS, Huntington B, Rushton J, Devleesschauwer B, Sartorius B, Van Boeckel TP, and Pigott DM
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- Animals, Humans, Bacteria drug effects, Bacteria isolation & purification, Bacteria classification, Cattle, Epidemiological Monitoring, Livestock microbiology, Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents therapeutic use, Drug Resistance, Bacterial
- Abstract
Background: Bacterial antimicrobial resistance (AMR) is a global threat to both humans and livestock. Despite this, there is limited global consensus on data-informed, priority areas for intervention in both sectors. We compare current livestock AMR data collection efforts with other variables pertinent to human and livestock AMR to identify critical data gaps and mutual priorities., Methods: We globally synthesized livestock AMR data from open-source surveillance reports and point prevalence surveys stratified for six pathogens (Escherichia coli, Staphylococcus aureus, non-typhoidal Salmonella, Campylobacter spp., Enterococcus faecalis, Enterococcus faecium) and eleven antimicrobial classes important in human and veterinary use, published between 2000 and 2020. We also included all livestock species represented in the data: cattle, chickens, pigs, sheep, turkeys, ducks, horses, buffaloes, and goats. We compared this data with intended priorities calculated from: disability-adjusted life years (DALYs), livestock antimicrobial usage (AMU), livestock biomass, and a global correlation exercise between livestock and human proportion of resistant isolates., Results: Resistance to fluoroquinolones and macrolides in Staphylococcus aureus were identified as priorities in many countries but, less than 10% of these reported livestock AMR data. Resistance data for Escherichia coli specific to cattle, chickens, and pigs, which we prioritized, were also well collected. AMR data collection on non-typhoidal Salmonella and other livestock species were often not prioritized. Of 232 categories prioritized by at least one country, data were only collected for 48% (n = 112)., Conclusions: The lack of livestock AMR data globally for broad resistance in Staphylococcus aureus could underplay their zoonotic threat. Countries can bolster livestock AMR data collection, reporting, and intervention setting for Staphylococcus aureus as done for Escherichia coli. This framework can provide guidance on areas to strengthen AMR surveillance and decision-making for humans and livestock, and if done routinely, can adapt to resistance trends and priorities., (© 2024. The Author(s).)
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- 2024
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27. Application of Global Burden of Animal Diseases methods at country level: experiences of the Ethiopia case study.
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Jemberu WT, Chaters G, Asfaw W, Asteraye GB, Amenu K, Huntington B, Knight-Jones TJD, and Rushton J
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- Ethiopia epidemiology, Animals, Humans, Global Burden of Disease, Animal Husbandry methods, Animal Husbandry economics, Animal Diseases epidemiology, Animal Diseases prevention & control, Animal Diseases economics, Livestock
- Abstract
Animals play a central role in human livelihoods and welfare. Animal diseases have a great impact on the benefits humans derive from animals and can also pose a risk to human health. Better control of animal diseases generates wider societal benefits, including reducing the climate and ecological impacts of livestock and improving animal welfare. To better understand the scale of investment justified for the control and prevention of animal disease, the wide-ranging impacts of disease on animal production and health must be measured. The Global Burden of Animal Diseases (GBADs) programme is quantifying animal disease burden from the local to global levels. The GBADs programme includes country case studies for national- and local-level analysis. Ethiopia is the first case study country in which GBADs methods have been applied. GBADs'Ethiopia case study consists of three activity areas: i) stakeholder engagement; ii) livestock disease burden estimation, including data collection, analytics, evidence generation and communication; and iii) capacity building in animal health economics. At the start of the case study, various stakeholder communication platforms were used to familiarise stakeholders with GBADs and engage their support in various ways, including data access, and, through this engagement, to ensure the programme tools and outputs were relevant and useful to their needs. Existing data were retrieved from multiple sources and used to estimate disease burden. This process involved multiple steps, including estimation of biomass and economic value, the Animal Health Loss Envelope (farm-level disease burden), wider economic impacts and attribution of the disease burden to different levels of causes. This was carried out for major livestock species (cattle, sheep, goats and poultry) in Ethiopia. Capacity building on animal health economics was carried out for GBADs end users to increase competence in utilising animal health economic evidence, including GBADs outputs. This article documents experiences of the implementation of these activities in the GBADs Ethiopia case study.
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- 2024
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28. The application of Global Burden of Animal Diseases methodology to aquatic animal production.
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Peeler EJ, Brun E, Misund B, Gilbert W, Huntington B, Reantaso M, Walde C, and Kennerley A
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- Animals, Global Burden of Disease, Fishes, Aquaculture economics, Fish Diseases prevention & control, Fish Diseases epidemiology
- Abstract
The Global Burden of Animal Diseases (GBADs) programme's key objective â€" to provide a systematic approach to determine the burden of animal disease â€" is as relevant to aquatic as to terrestrial animal production systems. However, to date GBADs methods have mainly been applied to terrestrial animal production systems. The challenges in applying GBADs methods, notably the Animal Health Loss Envelope (AHLE), vary considerably by production system. The authors demonstrate how the AHLE can be calculated for rainbow trout production in England and Wales and acknowledge that its application to other systems (e.g. hatchery production, polyculture and no-feed mollusc production) is more complex. For example, in small scale tropical fish production the impact of suboptimal nutrition on production would need to be addressed. Recirculating aquaculture systems have inherent high levels of biosecurity and disease control, and thus low levels of disease. Removing the capital and running costs associated with biosecurity fundamentally changes the system and invalidates the AHLE calculation. Lack of data from many systems, notably small-scale tropical finfish farming, means that expert opinion will be needed to support the application of GBADs methods. While calculation of the AHLE is the focus of this article, it should be noted that attribution to causes and value chain modelling are needed to generate data on the wider societal impact of aquatic animal diseases (and possible interventions), which governments require to support decision-making about resource allocation.
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- 2024
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29. How the Global Burden of Animal Diseases links to the Global Burden of Crop Loss: a food systems perspective.
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Szyniszewska AM, Simpkins KM, Thomas L, Beale T, Milne AE, Brown ME, Taylor B, Oliver G, Bebber DP, Woolman T, Mahmood S, Murphy C, Huntington B, and Finegold C
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- Animals, Humans, Global Health, Poultry, One Health, Crops, Agricultural, Animal Diseases epidemiology, Animal Diseases prevention & control, Food Supply
- Abstract
Food systems comprise interconnected webs of processes that together transform inputs (land, labour, water, nutrients and genetics, to mention just a few) into outputs such as nutrition and revenue for human societies. Perfect systems do not exist; rather, global food systems operate in the presence of hazards, biotic and abiotic alike, and under the constraint of limited resources to mitigate these hazards. There are, therefore, inefficiencies in these systems, which lead to losses in terms of monetary, nutritional, health and environmental values and create additional negative externalities in the health, social and environmental spaces. Health hazards in the food system do not respect arbitrary distinctions between the crop and livestock sectors, which are highly interconnected. These linkages exist where one sector provides inputs to another or through substitution effects where supply in one sector influences demand in another. The One Health approach advocates investigating the intersectoral hazards in a highly interdisciplinary manner. This article provides a conceptual framework for integrating the methodologies developed by the Global Burden of Crop Loss and Global Burden of Animal Diseases initiatives to generate burden estimates for hazards in food systems that better account for interconnectivity and foster an improved understanding of food systems that is aligned with the interdisciplinary nature of the One Health approach. A case study related to maize and poultry sector linkages in the wider context of public and environmental health is presented.
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- 2024
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30. P-NADs: P UX-based NA nobody degraders for ubiquitin-independent degradation of target proteins.
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Wang J, Chistov G, Zhang J, Huntington B, Salem I, Sandholu A, and Arold ST
- Abstract
Targeted protein degradation (TPD) allows cells to maintain a functional proteome and to rapidly adapt to changing conditions. Methods that repurpose TPD for the deactivation of specific proteins have demonstrated significant potential in therapeutic and research applications. Most of these methods are based on proteolysis targeting chimaeras (PROTACs) which link the protein target to an E3 ubiquitin ligase, resulting in the ubiquitin-based degradation of the target protein. In this study, we introduce a method for ubiquitin-independent TPD based on nanobody-conjugated plant ubiquitin regulatory X domain-containing (PUX) adaptor proteins. We show that the P UX-based NA nobody D egraders (P-NADs) can unfold a target protein through the Arabidopsis and human orthologues of the CDC48 unfoldase without the need for ubiquitination or initiating motifs. We demonstrate that P-NAD plasmids can be transfected into a human cell line, where the produced P-NADs use the endogenous CDC48 machinery for ubiquitin-independent TPD of a 143 kDa multidomain protein. Thus, P-NADs pave the road for ubiquitin-independent therapeutic TPD approaches. In addition, the modular P-NAD design combined with in vitro and cellular assays provide a versatile platform for elucidating functional aspects of CDC48-based TPD in plants and animals., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2024 The Authors.)
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- 2024
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31. AlphaFold2 modeling and molecular dynamics simulations of an intrinsically disordered protein.
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Guo HB, Huntington B, Perminov A, Smith K, Hastings N, Dennis P, Kelley-Loughnane N, and Berry R
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- Protein Conformation, Protein Folding, Protein Multimerization, Molecular Dynamics Simulation, Intrinsically Disordered Proteins chemistry, Intrinsically Disordered Proteins metabolism
- Abstract
We use AlphaFold2 (AF2) to model the monomer and dimer structures of an intrinsically disordered protein (IDP), Nvjp-1, assisted by molecular dynamics (MD) simulations. We observe relatively rigid dimeric structures of Nvjp-1 when compared with the monomer structures. We suggest that protein conformations from multiple AF2 models and those from MD trajectories exhibit a coherent trend: the conformations of an IDP are deviated from each other and the conformations of a well-folded protein are consistent with each other. We use a residue-residue interaction network (RIN) derived from the contact map which show that the residue-residue interactions in Nvjp-1 are mainly transient; however, those in a well-folded protein are mainly persistent. Despite the variation in 3D shapes, we show that the AF2 models of both disordered and ordered proteins exhibit highly consistent profiles of the pLDDT (predicted local distance difference test) scores. These results indicate a potential protocol to justify the IDPs based on multiple AF2 models and MD simulations., Competing Interests: The authors declare no competing interests., (Copyright: This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication.)
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- 2024
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32. Quantifying cost of disease in livestock: a new metric for the Global Burden of Animal Diseases.
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Gilbert W, Marsh TL, Chaters G, Jemberu WT, Bruce M, Steeneveld W, Afonso JS, Huntington B, and Rushton J
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- Animals, Cost of Illness, Chickens, Global Burden of Disease, Global Health, Livestock, Animal Diseases economics, Animal Diseases epidemiology, Animal Husbandry economics, Animal Husbandry methods
- Abstract
Background: Increasing awareness of the environmental and public health impacts of expanding and intensifying animal-based food and farming systems creates discord, with the reliance of much of the world's population on animals for livelihoods and essential nutrition. Increasing the efficiency of food production through improved animal health has been identified as a step towards minimising these negative effects without compromising global food security. The Global Burden of Animal Diseases (GBADs) programme aims to provide data and analytical methods to support positive change in animal health across all livestock and aquaculture animal populations., Methods: In this study, we present a metric that begins the process of disease burden estimation by converting the physical consequences of disease on animal performance to farm-level costs of disease, and calculates a metric termed the Animal Health Loss Envelope (AHLE) via comparison between the status quo and a disease-free ideal. An example calculation of the AHLE metric for meat production from broiler chickens is provided., Findings: The AHLE presents the direct financial costs of disease at farm-level for all causes by estimating losses and expenditure in a given farming system. The general specification of the model measures productivity change at farm-level and provides an upper bound on productivity change in the absence of disease. On its own, it gives an indication of the scale of total disease cost at farm-level., Interpretation: The AHLE is an essential stepping stone within the GBADs programme because it connects the physical performance of animals in farming systems under different environmental and management conditions and different health states to farm economics. Moving forward, AHLE results will be an important step in calculating the wider monetary consequences of changes in animal health as part of the GBADs programme., Funding: Bill & Melinda Gates Foundation, the UK Foreign, Commonwealth and Development Office, EU Horizon 2020 Research and Innovation Programme., Competing Interests: Declaration of interests We declare no competing interests., (Copyright © 2024 The Author(s). Published by Elsevier Ltd. This is an Open Access article under the CC BY 4.0 license. Published by Elsevier Ltd.. All rights reserved.)
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- 2024
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33. Current and potential use of animal disease data by stakeholders in the global south and north.
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Grace D, Amenu K, Daborn CJ, Knight-Jones T, Huntington B, Young S, Poole J, and Rushton J
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- Animals, Policy Making, Animal Diseases epidemiology, Animal Diseases prevention & control
- Abstract
What cannot be measured will not be managed. The Global Burden of Animal Diseases (GBADs) will generate information on animal disease burdens by species, production system, type and gender of farmer and consumer, geographical region, and time period. To understand the demand for burden of animal disease (BAD) data and how end-users might benefit from this, we reviewed the literature on animal diseases prioritisation processes (ADPP) and conducted a survey of BAD information users. The survey covered their current use of data and prioritizations as well as their needs for different, more, and better information. We identified representative (geography, sector, species) BAD experts from the authors' networks and publicly available documents and e-mailed 1485 experts. Of 791 experts successfully contacted, 271 responded (34% response rate), and 185 complete and valid responses were obtained. Most respondents came from the public sector followed by academia/research, and most were affiliated to institutions in low- and middle-income countries (LMICs). Of the six ADPPs commonly featured in literature, only three were recognised by more than 40% of experts. An additional 23 ADPPs were used. Awareness of ADDPs varied significantly by respondents. Respondents ranked animal disease priorities. We used exploded logit to combine first, second and third disease priorities to better understand prioritzation and their determinants. Expert priorities differed significantly from priorities identified by the ADDPs, and also from the priorities stated veterinary services as reported in a survey for a World Organisation of Animal Health (WOAH) technical item. Respondents identified 15 different uses of BAD data. The most common use was presenting evidence (publications, official reports, followed by disease management, policy development and proposal writing). Few used disease data for prioritzation or resource allocation, fewer routinely used economic data for decision making, and less than half were aware of the use of decision support tools (DSTs). Nearly all respondents considered current BAD metrics inadequate, most considered animal health information insufficiently available and not evidence-based, and most expressed concerns that decision-making processes related to animal health lacked transparency and fairness. Cluster analysis suggested three clusters of BAD users and will inform DSTs to help them better meet their specific objectives. We conclude that there is a lack of satisfaction with current BAD information, and with existing ADDPs, contributing to sub-optimal decision making. Improved BAD data would have multiple uses by different stakeholders leading to better evidenced decisions and policies; moreover, clients will need support (including DSTs) to optimally use BAD information., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Authors. Published by Elsevier B.V. All rights reserved.)
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- 2024
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34. Rationalising development of classification systems describing livestock production systems for disease burden analysis within the Global Burden of Animal Diseases programme.
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Li Y, McIntyre KM, Rasmussen P, Gilbert W, Chaters G, Raymond K, Jemberu WT, Larkins A, Patterson GT, Kwok S, Kappes AJ, Mayberry D, Schrobback P, Acosta MH, Stacey DA, Huntington B, Bruce M, Knight-Jones T, and Rushton J
- Subjects
- Animals, Animal Diseases epidemiology, Animal Diseases economics, Global Burden of Disease, Livestock, Animal Husbandry economics, Animal Husbandry methods
- Abstract
The heterogeneity that exists across the global spectrum of livestock production means that livestock productivity, efficiency, health expenditure and health outcomes vary across production systems. To ensure that burden of disease estimates are specific to the represented livestock population and people reliant upon them, livestock populations need to be systematically classified into different types of production system, reflective of the heterogeneity across production systems. This paper explores the data currently available of livestock production system classifications and animal health through a scoping review as a foundation for the development of a framework that facilitates more specific estimates of livestock disease burdens. A top-down framework to classification is outlined based on a systematic review of existing classification methods and provides a basis for simple grouping of livestock at global scale. The proposed top-down classification framework, which is dominated by commodity focus of production along with intensity of resource use, may have less relevance at the sub-national level in some jurisdictions and will need to be informed and adapted with information on how countries themselves categorize livestock and their production systems. The findings in this study provide a foundation for analysing animal health burdens across a broad level of production systems. The developed framework will fill a major gap in how livestock production and health are currently approached and analysed., Competing Interests: Declaration of competing interest The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2024 The Authors. Published by Elsevier Ltd.. All rights reserved.)
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- 2024
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35. Approximating the global economic (market) value of farmed animals.
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Schrobback P, Dennis G, Li Y, Mayberry D, Shaw A, Knight-Jones T, Marsh TL, Pendell DL, Torgerson PR, Gilbert W, Huntington B, Raymond K, Stacey DA, Bernardo T, Bruce M, McIntyre KM, Rushton J, and Herrero M
- Abstract
Understanding the global economic importance of farmed animals to society is essential as a baseline for decision making about future food systems. We estimated the annual global economic (market) value of live animals and primary production outputs, e.g., meat, eggs, milk, from terrestrial and aquatic farmed animal systems. The results suggest that the total global market value of farmed animals ranges between 1.61 and 3.3 trillion USD (2018) and is expected to be similar in absolute terms to the market value of crop outputs (2.57 trillion USD). The cattle sector dominates the market value of farmed animals. The study highlights the need to consider other values of farmed animals to society, e.g., finance/insurance value and cultural value, in decisions about the sector's future., Competing Interests: The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Corresponding author and all co-authors report that financial support was provided by Bill and Melinda Gates Foundation. Corresponding author and all co-authors reports financial support was provided by Commonwealth and Development Office of UK government., (© 2023 The Authors.)
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- 2023
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36. Animal sources of antimicrobial-resistant bacterial infections in humans: a systematic review.
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Fastl C, De Carvalho Ferreira HC, Babo Martins S, Sucena Afonso J, di Bari C, Venkateswaran N, Pires SM, Mughini-Gras L, Huntington B, Rushton J, Pigott D, and Devleesschauwer B
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- Humans, Animals, Cattle, Swine, Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents therapeutic use, Drug Resistance, Bacterial, Bacteria, Chickens, Bacterial Infections epidemiology, Bacterial Infections veterinary, Bacterial Infections drug therapy, Anti-Infective Agents
- Abstract
Bacterial antimicrobial resistance (AMR) is among the leading global health challenges of the century. Animals and their products are known contributors to the human AMR burden, but the extent of this contribution is not clear. This systematic literature review aimed to identify studies investigating the direct impact of animal sources, defined as livestock, aquaculture, pets, and animal-based food, on human AMR. We searched four scientific databases and identified 31 relevant publications, including 12 risk assessments, 16 source attribution studies, and three other studies. Most studies were published between 2012 and 2022, and most came from Europe and North America, but we also identified five articles from South and South-East Asia. The studies differed in their methodologies, conceptual approaches (bottom-up, top-down, and complex), definitions of the AMR hazard and outcome, the number and type of sources they addressed, and the outcome measures they reported. The most frequently addressed animal source was chicken, followed by cattle and pigs. Most studies investigated bacteria-resistance combinations. Overall, studies on the direct contribution of animal sources of AMR are rare but increasing. More recent publications tailor their methodologies increasingly towards the AMR hazard as a whole, providing grounds for future research to build on.
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- 2023
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37. The global burden of neglected zoonotic diseases: Current state of evidence.
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Di Bari C, Venkateswaran N, Fastl C, Gabriël S, Grace D, Havelaar AH, Huntington B, Patterson GT, Rushton J, Speybroeck N, Torgerson P, Pigott DM, and Devleesschauwer B
- Abstract
The majority of emerging infectious diseases are zoonoses, most of which are classified as "neglected". By affecting both humans and animals, zoonoses pose a dual burden. The disability-adjusted life year (DALY) metric quantifies human health burden since it combines mortality and morbidity. This review aims to describe and analyze the current state of evidence on neglected zoonotic diseases (NZDs) burden and start a discussion on the current understanding of the global burden of NZDs. We identified 26 priority NZDs through consulting three international repositories for national prioritization exercises. A systematic review of global and national burden of disease (BoD) studies was conducted using pre-selected databases. Data on diseases, location and DALYs were extracted for each eligible study. A total of 1887 records were screened, resulting in 74 eligible studies. The highest number of BoD was found for non-typhoidal salmonellosis (23), whereas no estimates were found for West Nile, Marburg and Lassa fever. Geographically, the highest number of studies was performed in the Netherlands (11), China (5) and Iran (4). The number of BoD retrieved mismatched the perceived importance in national prioritization exercises. For example, anthrax was considered a priority NZD in 65 countries; however, only one national study estimating BoD was retrieved. By summing the available global estimates, the selected NZDs caused at least 21 million DALYs per year, a similar order of magnitude to (but less than) the burden due to foodborne disease (included in the Foodborne Disease Burden Epidemiology Reference Group). The global burden of disease landscape of NZDs remains scattered. There are several priority NZDs for which no burden estimates exist, and the number of BoD studies does not reflect national disease priorities. To have complete and consistent estimates of the global burden of NZDs, these diseases should be integrated in larger global burden of disease initiatives., Competing Interests: All authors declare that they have no conflicts of interest., (© 2023 The Authors. Published by Elsevier B.V.)
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- 2023
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38. Informatics progress of the Global Burden of Animal Diseases programme towards data for One Health.
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Raymond K, BenSassi N, Patterson GT, Huntington B, Rushton J, Stacey DA, and Bernardo TM
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- Humans, Animals, Sustainable Development, Informatics, One Health, Animal Diseases epidemiology, Animal Diseases prevention & control
- Abstract
The Global Burden of Animal Diseases (GBADs) programme will provide data-driven evidence that policy-makers can use to evaluate options, inform decisions, and measure the success of animal health and welfare interventions. The GBADs' Informatics team is developing a transparent process for identifying, analysing, visualising and sharing data to calculate livestock disease burdens and drive models and dashboards. These data can be combined with data on other global burdens (human health, crop loss, foodborne diseases) to provide a comprehensive range of information on One Health, required to address such issues as antimicrobial resistance and climate change. The programme began by gathering open data from international organisations (which are undergoing their own digital transformations). Efforts to achieve an accurate estimate of livestock numbers revealed problems in finding, accessing and reconciling data from different sources over time. Ontologies and graph databases are being developed to bridge data silos and improve the findability and interoperability of data. Dashboards, data stories, a documentation website and a Data Governance Handbook explain GBADs data, now available through an application programming interface. Sharing data quality assessments builds trust in such data, encouraging their application to livestock and One Health issues. Animal welfare data present a particular challenge, as much of this information is held privately and discussions continue regarding which data are the most relevant. Accurate livestock numbers are an essential input for calculating biomass, which subsequently feeds into calculations of antimicrobial use and climate change. The GBADs data are also essential to at least eight of the United Nations Sustainable Development Goals.
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- 2023
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39. Coral cover remains suppressed three years after derelict net removal in a remote shallow water coral reef ecosystem.
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Halperin AA, Lichowski F, Morioka J, O'Brien K, Suka R, and Huntington B
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- Animals, Ecosystem, Water, Hawaii, Coral Reefs, Anthozoa
- Abstract
The uninhabited Northwestern Hawaiian Islands (NWHI) contain 70 % of the shallow water coral reefs in the United States. An estimated 52 metric tons of derelict fishing nets accumulate here annually, becoming entangled in the reef structure and reducing coral cover. Here, we investigated the longevity of derelict net impacts on coral reef communities three years after net removal at Pearl and Hermes Atoll. Structure-from-Motion technology was used to resurvey net impact and control sites to determine whether coral cover rebounded at impact sites over time. Our results showed significantly lower coral cover at impact sites. Much of the bare substrate immediately exposed after net removal was also colonized by algae -not reef calcifiers. Continued monitoring of these sites will add clarity to the lasting nature of derelict nets on reefs, and supplementing net removal efforts with active restoration activities may assist in restoring the ecosystem function of impacted sites faster., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper. This study was conducted through funding and support from the National Fish and Wildlife Foundation (NFWF), the National Oceanic and Atmospheric Administration's Marine Debris Program (NOAA MDP), the NOAA Damage Assessment, Remediation, and Restoration Program (NOAA DARRP), National Oceanic and Atmospheric Administration's Marine Debris Program (NOAA MDP), the Papahānaumokuākea Marine National Monument (PMNM), the NOAA Pacific Island Fisheries Science Center (NOAA PIFSC) and the Cooperative Institute of Marine and Atmospheric Research (CIMAR) at the University of Hawai‘i at Mānoa., (Copyright © 2023 The Authors. Published by Elsevier Ltd.. All rights reserved.)
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- 2023
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40. Nanoengineering the Redispersibility of Cellulose Nanocrystals.
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Huntington B, Pitcher ML, and Sheikhi A
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- Cellulose chemistry, Water chemistry, Cellulose, Oxidized, Nanoparticles chemistry
- Abstract
Enhancing the redispersibility of dried colloidal particles to yield stable dispersions after rehydration is a persistent challenge in the sustainable processing of nanocelluloses due to hydrogen bonding-induced irreversible aggregation. Programming nanocelluloses, such as cellulose nanocrystals (CNC), with moieties that enable colloidal repulsion after rehydration may address this challenge and contribute to the United Nation (UN)'s sustainable development goals (SDGs) of urban development and sustainable living (SDGs 9 and 11) and cradle-to-cradle processing (SDG 12). We hypothesize that imparting electrosteric repulsion to CNC via polyanionic disordered cellulose chains (hairs) protruding from each end may render the dried nanocrystals highly redispersible in aqueous media. Anionic hairy CNC (AHCNC), that is, CNC decorated with dicarboxylated cellulose (DCC) chains, were synthesized by the preferential, successive periodate/chlorite oxidation of the disordered regions of cellulose fibrils, bearing >5 mmol of carboxylate groups per gram. The colloidal properties of AHCNC were compared with those of sulfate half-ester group-functionalized CNC and TEMPO-oxidized CNC (TOCNC) after redispersion in aqueous media, followed by comparing the redispersibility of AHCNC and CNC in aqueous solutions containing monovalent or divalent cations and at varying pH. The AHCNC had remarkable aqueous redispersibility even at high ionic strengths and extreme pH. The unique redispersibility mechanism of dried AHCNC relies on the synergistic steric and electrostatic repulsion forces, recuperated upon the rehydration of DCC. This work may open new opportunities for more sustainable and cost-effective handling and processing of nanocelluloses.
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- 2023
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41. Methodological choices in brucellosis burden of disease assessments: A systematic review.
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Di Bari C, Venkateswaran N, Bruce M, Fastl C, Huntington B, Patterson GT, Rushton J, Torgerson P, Pigott DM, and Devleesschauwer B
- Subjects
- Humans, Quality-Adjusted Life Years, Global Health, Cost of Illness, Life Expectancy, Brucellosis epidemiology
- Abstract
Background: Foodborne and zoonotic diseases such as brucellosis present many challenges to public health and economic welfare. Increasingly, researchers and public health institutes use disability-adjusted life years (DALYs) to generate a comprehensive comparison of the population health impact of these conditions. DALYs calculations, however, entail a number of methodological choices and assumptions, with data gaps and uncertainties to accommodate. Thisreview identifies existing brucellosis burden of disease studies and analyzes their methodological choices, assumptions, and uncertainties. It supports the Global Burden of Animal Diseases programme in the development of a systematic methodology to describe the impact of animal diseases on society, including human health., Methods/principal Findings: A systematic search for brucellosis burden of disease calculations was conducted in pre-selected international and grey literature databases. Using a standardized reporting framework, we evaluated each estimate on a variety of key methodological assumptions necessary to compute a DALY. Fourteen studies satisfied the inclusion criteria (human brucellosis and quantification of DALYs). One study reported estimates at the global level, the rest were national or subnational assessments. Data regarding different methodological choices were extracted, including detailed assessments of the adopted disease models. Most studies retrieved brucellosis epidemiological data from administrative registries. Incidence data were often estimated on the basis of laboratory-confirmed tests. Not all studies included mortality estimates (Years of Life Lost) in their assessments due to lack of data or the assumption that brucellosis is not a fatal disease. Only two studies used a model with variable health states and corresponding disability weights. The rest used a simplified singular health state approach. Wide variation was seen in the duration chosen for brucellosis, ranging from 2 weeks to 4.5 years, irrespective of the whether a chronic state was included., Conclusion: Available brucellosis burden of disease assessments vary widely in their methodology and assumptions. Further research is needed to better characterize the clinical course of brucellosis and to estimate case-fatality rates. Additionally, reporting of methodological choices should be improved to enhance transparency and comparability of estimates. These steps will increase the value of these estimates for policy makers., Competing Interests: The authors have declared that no competing interests exist., (Copyright: © 2022 Di Bari et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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- 2022
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42. Coral taxonomy and local stressors drive bleaching prevalence across the Hawaiian Archipelago in 2019.
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Winston M, Oliver T, Couch C, Donovan MK, Asner GP, Conklin E, Fuller K, Grady BW, Huntington B, Kageyama K, Kindinger TL, Kozar K, Kramer L, Martinez T, McCutcheon A, McKenna S, Rodgers K, Shayler CK, Vargas-Angel B, and Zgliczynski B
- Subjects
- Animals, Coral Reefs, Hawaii epidemiology, Prevalence, Temperature, Anthozoa physiology
- Abstract
The Hawaiian Archipelago experienced a moderate bleaching event in 2019-the third major bleaching event over a 6-year period to impact the islands. In response, the Hawai'i Coral Bleaching Collaborative (HCBC) conducted 2,177 coral bleaching surveys across the Hawaiian Archipelago. The HCBC was established to coordinate bleaching monitoring efforts across the state between academic institutions, non-governmental organizations, and governmental agencies to facilitate data sharing and provide management recommendations. In 2019, the goals of this unique partnership were to: 1) assess the spatial and temporal patterns of thermal stress; 2) examine taxa-level patterns in bleaching susceptibility; 3) quantify spatial variation in bleaching extent; 4) compare 2019 patterns to those of prior bleaching events; 5) identify predictors of bleaching in 2019; and 6) explore site-specific management strategies to mitigate future bleaching events. Both acute thermal stress and bleaching in 2019 were less severe overall compared to the last major marine heatwave events in 2014 and 2015. Bleaching observed was highly site- and taxon-specific, driven by the susceptibility of remaining coral assemblages whose structure was likely shaped by previous bleaching and subsequent mortality. A suite of environmental and anthropogenic predictors was significantly correlated with observed bleaching in 2019. Acute environmental stressors, such as temperature and surface light, were equally important as previous conditions (e.g. historical thermal stress and historical bleaching) in accounting for variation in bleaching during the 2019 event. We found little evidence for acclimation by reefs to thermal stress in the main Hawaiian Islands. Moreover, our findings illustrate how detrimental effects of local anthropogenic stressors, such as tourism and urban run-off, may be exacerbated under high thermal stress. In light of the forecasted increase in severity and frequency of bleaching events, future mitigation of both local and global stressors is a high priority for the future of corals in Hawai'i., Competing Interests: The authors have declared that no competing interests exist.
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- 2022
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43. Thicker Ice Improves the Integrity and Angular Distribution of CDC48A Hexamers on Cryo-EM Grids.
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Huntington B, Zhao L, Bron P, Shahul Hameed UF, Arold ST, and Qureshi BM
- Abstract
Many cryogenic electron microscopy (cryo-EM) single particle analyses are constrained by the sample preparation step upon which aggregation, dissociation, and/or preferential orientation of particles can be introduced. Here, we report how we solved these problems in the case of CDC48A, a hexameric AAA ATPase from Arabidopsis thaliana . CDC48A hexamers are well preserved under negative staining conditions but disassemble during grid freezing using the classical blotting method. Vitrification of grids using the blot-free Chameleon method preserved the integrity of particles but resulted in their strong preferential orientation. We then used a strategy where we improved in parallel the purification of CDC48A and the conditions for cryo-EM data acquisition. Indeed, we noted that images taken from thicker ice presented an even distribution of intact particles with random orientations, but resulted in a lower image resolution. Consequently, in our case, distribution, orientation, image resolution, and the integrity of particles were tightly correlated with ice thickness. By combining the more homogeneous and stable CDC48A hexamers resulting from our improved purification protocol with an iterative search across different ice thicknesses, we identified an intermediate thickness that retained sufficiently high-resolution structural information while maintaining a complete distribution of particle orientations. Our approach may provide a simple, fast, and generally applicable strategy to record data of sufficient quality under standard laboratory and microscope settings. This method may be of particular value when time and resources are limited., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Huntington, Zhao, Bron, Shahul Hameed, Arold and Qureshi.)
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- 2022
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44. Movement and retention of derelict fishing nets in Northwestern Hawaiian Island reefs.
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McCoy KS, Huntington B, Kindinger TL, Morioka J, and O'Brien K
- Subjects
- Hawaii, Islands, Coral Reefs, Hunting
- Abstract
Derelict fishing nets pose hazards to marine systems as they travel through the ocean or become ensnared on coral reefs. Understanding of the movement of nets within shallow atolls can help to optimize operations to protect these shallow reefs. In 2018, six derelict fishing nets at Manawai (Pearl and Hermes Reef) in the Northwestern Hawaiian Islands were tagged with satellite-transmitting buoys and tracked for three years. This study reveals that nets that enter the atoll from the northeast travel southwest towards the center of the atoll, and nets in the center can remain ensnared on the same reef for at least three years. This study shows that satellite buoys are a successful approach to tracking derelict net movement, and can inform future debris removal missions., (Published by Elsevier Ltd.)
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- 2022
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45. The Effectiveness of Self-Guided Virtual-Reality Exposure Therapy for Public-Speaking Anxiety.
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Premkumar P, Heym N, Brown DJ, Battersby S, Sumich A, Huntington B, Daly R, and Zysk E
- Abstract
Objectives: Self-guided virtual-reality exposure therapy (VRET) is a psychological intervention that enables a person to increase their own exposure to perceived threat. Public-speaking anxiety (PSA) is an anxiety-provoking social situation that is characterized by fear of negative evaluation from an audience. This pilot study aimed to determine whether self-guided VRET (1) increases exposure to PSA-specific virtual social threats, and (2) reduces anxiety, arousal, heartrate and PSA over repeated exposure. Methods: Thirty-two University students (27 completers) with high self-reported public-speaking anxiety attended 2 weekly self-guided VRET sessions. Each session involved the participant delivering a 20-min speech in a virtual classroom. Participants were able to increase their exposure to virtual social threat through the audience size, audience reaction, number of speech prompts, and their own salience in the virtual classroom at 4-min intervals. Participants' heartrates and self-reported anxiety and arousal were monitored during these intervals. Participants completed psychometric assessments after each session and 1 month later. Results: Participants increased their exposure to virtual social threat during each VRET session, which coincided with a reduction in heartrate and self-reported anxiety and arousal. Improvement in PSA occurred post-treatment and 1 month later. The in-session improvement in anxiety correlated with reductions in fear of negative evaluation post-treatment and 1 month later. Conclusions: Increased self-exposure to virtual social threat from self-guided VRET relieves anxiety and shows immediate reductions in subjective and physiological arousal during application, but also yields sustained improvement in PSA., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Premkumar, Heym, Brown, Battersby, Sumich, Huntington, Daly and Zysk.)
- Published
- 2021
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46. Global Burden of Animal Diseases: a novel approach to understanding and managing disease in livestock and aquaculture.
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Huntington B, Bernardo TM, Bondad-Reantaso M, Bruce M, Devleesschauwer B, Gilbert W, Grace D, Havelaar A, Herrero M, Marsh TL, Mesenhowski S, Pendell D, Pigott D, Shaw AP, Stacey D, Stone M, Torgerson P, Watkins K, Wieland B, and Rushton J
- Subjects
- Animals, Aquaculture, Livestock, Animal Diseases epidemiology, One Health
- Abstract
Investments in animal health and Veterinary Services can have a measurable impact on the health of people and the environment. These investments require a baseline metric that describes the burden of animal health and welfare in order to justify and prioritise resource allocation and from which to measure the impact of interventions. This paper is part of a process of scientific enquiry in which problems are identified and solutions sought in an inclusive way. It poses the broad question: what should a system to measure the animal disease burden on society look like and what value would it add? Moreover, it aims to do this in such a way as to be accessible by a wide audience, who are encouraged to engage in this debate. Given that farmed animals, including those raised by poor smallholders, are an economic entity, this system should be based on economic principles. These poor farmers are negatively impacted by disparities in animal health technology, which can be addressed through a mixture of supply-led and demand-driven interventions, reinforcing the relevance of targeted financial support from government and non-governmental organisations. The Global Burden of Animal Diseases (GBADs) Programme will glean existing data to measure animal health losses within carefully characterised production systems. Consistent and transparent attribution of animal health losses will enable meaningful comparisons of the animal disease burden to be made between diseases, production systems and countries, and will show how it is apportioned by people's socio-economic status and gender. The GBADs Programme will produce a cloud-based knowledge engine and data portal, through which users will access burden metrics and associated visualisations, support for decisionmaking in the form of future animal health scenarios, and the outputs of wider economic modelling. The vision of GBADs, strengthening the food system for the benefit of society and the environment, is an example of One Health thinking in action.
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- 2021
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47. Re-calculating the cost of coccidiosis in chickens.
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Blake DP, Knox J, Dehaeck B, Huntington B, Rathinam T, Ravipati V, Ayoade S, Gilbert W, Adebambo AO, Jatau ID, Raman M, Parker D, Rushton J, and Tomley FM
- Subjects
- Animals, Coccidiosis economics, Animal Husbandry economics, Chickens, Coccidiosis veterinary, Poultry Diseases economics
- Abstract
Coccidiosis, caused by Eimeria species parasites, has long been recognised as an economically significant disease of chickens. As the global chicken population continues to grow, and its contribution to food security intensifies, it is increasingly important to assess the impact of diseases that compromise chicken productivity and welfare. In 1999, Williams published one of the most comprehensive estimates for the cost of coccidiosis in chickens, featuring a compartmentalised model for the costs of prophylaxis, treatment and losses, indicating a total cost in excess of £38 million in the United Kingdom (UK) in 1995. In the 25 years since this analysis the global chicken population has doubled and systems of chicken meat and egg production have advanced through improved nutrition, husbandry and selective breeding of chickens, and wider use of anticoccidial vaccines. Using data from industry representatives including veterinarians, farmers, production and health experts, we have updated the Williams model and estimate that coccidiosis in chickens cost the UK £99.2 million in 2016 (range £73.0-£125.5 million). Applying the model to data from Brazil, Egypt, Guatemala, India, New Zealand, Nigeria and the United States resulted in estimates that, when extrapolated by geographical region, indicate a global cost of ~ £10.4 billion at 2016 prices (£7.7-£13.0 billion), equivalent to £0.16/chicken produced. Understanding the economic costs of livestock diseases can be advantageous, providing baselines to evaluate the impact of different husbandry systems and interventions. The updated cost of coccidiosis in chickens will inform debates on the value of chemoprophylaxis and development of novel anticoccidial vaccines.
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- 2020
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48. Successful application of a novel technique to quantify negative impacts of derelict fishing nets on Northwestern Hawaiian Island reefs.
- Author
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Suka R, Huntington B, Morioka J, O'Brien K, and Acoba T
- Subjects
- Animals, Ecosystem, Hawaii, Islands, Anthozoa, Coral Reefs
- Abstract
The remote and uninhabited Northwestern Hawaiian Islands (NWHI) contain 70% of the shallow water coral reefs in the United States and are regularly exposed to derelict fishing nets. These nets snag on the shallow reefs, damaging or killing benthic communities. However, no data exist to quantify this impact. Here we use a novel application of photogrammetry, Structure-from-Motion (SfM), to calculate benthic cover from mosaic images at net-impact and control sites. Net-impact sites had significantly higher cover of bare substrate, sand, and crustose coralline algae and significantly lower coral and macroalgae cover compared to control sites. These differences were unrelated to net size and fouling. Our study demonstrates the utility of using SfM to efficiently quantify impacts of derelict fishing nets. Revisiting these sites will be essential to document how the reef recovers to further our understanding of the lasting impacts of derelict fishing nets on coral reef habitats., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Published by Elsevier Ltd.)
- Published
- 2020
- Full Text
- View/download PDF
49. Randomized trial comparing caregiver-only family-focused treatment to standard health education on the 6-month outcome of bipolar disorder.
- Author
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Perlick DA, Jackson C, Grier S, Huntington B, Aronson A, Luo X, and Miklowitz DJ
- Subjects
- Adult, Family Health, Female, Health Behavior, Humans, Male, Mental Health, Middle Aged, Treatment Outcome, Bipolar Disorder psychology, Bipolar Disorder therapy, Caregivers education, Caregivers psychology, Depression diagnosis, Depression psychology, Depression therapy, Family Therapy methods, Health Education methods, Self Care methods, Self Care psychology
- Abstract
Objectives: Caregivers of people with bipolar disorder often have depression and health problems. This study aimed to evaluate the sustained effects of a 12-15 week psychoeducational intervention on the health and mental health of caregivers of persons with bipolar disorder. We also evaluated the effects of the intervention on patients' mood symptoms over 6 months post-treatment., Methods: Caregivers of 46 persons with bipolar disorder were randomized to 12-15 weeks of a caregiver-only adaptation of family-focused treatment (FFT), in which caregivers were instructed on self-care strategies and ways to assist the patient in managing the illness, or to 8-12 sessions of standard health education. Independent evaluators assessed caregivers' depression and physical health and patients' mood symptoms before treatment, immediately after the treatment, and at 6 months post-treatment., Results: Randomization to FFT was associated with greater decreases in depression for both caregivers and patients over a 6-month follow-up period post-treatment. Reductions in patients' depression scores over 6 months post-treatment were mediated by reductions in caregivers' depression scores (z = -2.74, P < .01)., Conclusions: Interventions that are effective in reducing mood symptoms and improving health behavior in caregivers may have important health and mental health benefits for patients with bipolar disorder. Specifically, a treatment focused on caregiver education about bipolar disorder and the need for the caregiver to attend to his/her own health and mental health can benefit patients, even without their direct participation., (© 2018 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.)
- Published
- 2018
- Full Text
- View/download PDF
50. Systematic evaluation of isoform function in literature reports of alternative splicing.
- Author
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Bhuiyan SA, Ly S, Phan M, Huntington B, Hogan E, Liu CC, Liu J, and Pavlidis P
- Subjects
- Animals, Humans, Mice, Alternative Splicing, Computational Biology, Protein Isoforms genetics
- Abstract
Background: Although most genes in mammalian genomes have multiple isoforms, an ongoing debate is whether these isoforms are all functional as well as the extent to which they increase the functional repertoire of the genome. To ground this debate in data, it would be helpful to have a corpus of experimentally-verified cases of genes which have functionally distinct splice isoforms (FDSIs)., Results: We established a curation framework for evaluating experimental evidence of FDSIs, and analyzed over 700 human and mouse genes, strongly biased towards genes that are prominent in the alternative splicing literature. Despite this bias, we found experimental evidence meeting the classical definition for functionally distinct isoforms for ~ 5% of the curated genes. If we relax our criteria for inclusion to include weaker forms of evidence, the fraction of genes with evidence of FDSIs remains low (~ 13%). We provide evidence that this picture will not change substantially with further curation and conclude there is a large gap between the presumed impact of splicing on gene function and the experimental evidence. Furthermore, many functionally distinct isoforms were not traceable to a specific isoform in Ensembl, a database that forms the basis for much computational research., Conclusions: We conclude that the claim that alternative splicing vastly increases the functional repertoire of the genome is an extrapolation from a limited number of empirically supported cases. We also conclude that more work is needed to integrate experimental evidence and genome annotation databases. Our work should help shape research around the role of splicing on gene function from presuming large general effects to acknowledging the need for stronger experimental evidence.
- Published
- 2018
- Full Text
- View/download PDF
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