36 results on '"Iakova P"'
Search Results
2. The ubiquitin ligase Cullin-1 associates with chromatin and regulates transcription of specific c-MYC target genes
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Sweeney, Melanie A., Iakova, Polina, Maneix, Laure, Shih, Fu-Yuan, Cho, Hannah E., Sahin, Ergun, and Catic, Andre
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- 2020
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3. Self Perceptions as Predictors for Return to Work 2 Years After Rehabilitation in Orthopedic Trauma Inpatients
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Iakova, Maria, Ballabeni, Pierluigi, Erhart, Peter, Seichert, Nikola, Luthi, François, and Dériaz, Olivier
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- 2012
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4. Competition of CUGBP1 and calreticulin for the regulation of p21 translation determines cell fate
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Iakova, Polina, Wang, Guo‐Li, Timchenko, Lubov, Michalak, Marek, Pereira‐Smith, Olivia M, Smith, James R, and Timchenko, Nikolai A
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- 2004
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5. C/EBPα triggers proteasome‐dependent degradation of cdk4 during growth arrest
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Wang, Hongmei, Goode, Triona, Iakova, Polina, Albrecht, Jeffrey H., and Timchenko, Nikolai A.
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- 2002
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6. Neuronal SIRPα modulates disease pathology and progression in a mouse model of Alzheimer's disease.
- Author
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Samuel, Melanie, Iakova, Polina, Abdulwahab, Qudrat, Andrade, Pilar, and Jiang, Danye
- Abstract
Background: Microglia are phagocytic cells that play multiple critical roles in Alzheimer's disease susceptibility and progress. In parallel, they display remarkable diversity in their functional and molecular states in the context of disease. This suggests that a diverse portfolio of microglial subtypes modulates outcomes in AD, but the molecules that link microglia state to their function remain unknown. To address this question, we have probed whether microglia phagocytic states are regionally specified by brain neurons via a particular neuron‐derived receptor‐ligand pair – signal regulatory protein alpha (SIRPα) and CD47. Methods: To investigate the role of SIRPα, we use cell‐specific loss‐ and gain‐of‐function genetic approaches together with murine AD models. Results: Our data surprisingly show that neuron‐derived SIRPα is crucial for regulating microglial phagocytic function and phagocytic state in the context of AD. Neuronal SIRPα appears to achieve this by acting as a decoy receptor to prevent microglial CD47‐SIRPα signaling, thereby permitting microglia phagocytosis. In addition, we show that neuronal SIRPα alters microglia state by regulating microglia phagocytosis in a brain‐region specific manner. We have also identified AD pathology changes and cognitive dysfunction that are limited by neuronal SIRPα‐driven microglial phagocytosis. Conclusion: We show that neuronal SIRPα is a permissive cue for microglial phagocytosis in AD and is required to restrict AD progression and cognitive decline. Identification of a neuron‐derived mechanism that dictates microglia state plasticity is unexpected and changes the way we understand how neurons program microglia outcomes in the context of disease. Results from this study also help lay the groundwork for new therapeutic options to regionally modify brain microglia state and function. [ABSTRACT FROM AUTHOR]
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- 2023
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7. Increased Expression of Enzymes of Triglyceride Synthesis Is Essential for the Development of Hepatic Steatosis
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Jin, Jingling, Iakova, Polina, Breaux, Meghan, Sullivan, Emily, Jawanmardi, Nicole, Chen, Dahu, Jiang, Yanjun, Medrano, Estela M., and Timchenko, Nikolai A.
- Abstract
Molecular mechanisms underpinning nonalcoholic fatty liver disease (NAFLD) are not well understood. The earliest step of NAFLD is hepatic steatosis, which is one of the main characteristics of aging liver. Here, we present a molecular scenario of age-related liver steatosis. We show that C/EBPα-S193D knockin mice have age-associated epigenetic changes and develop hepatic steatosis at 2 months of age. The underlying mechanism of the hepatic steatosis in old wild-type (WT) mice and in young S193D mice includes increased amounts of tripartite p300-C/EBPα/β complexes that activate promoters of five genes that drive triglyceride synthesis. Knockdown of p300 in old WT mice inhibits hepatic steatosis. Indeed, transgenic mice expressing dominant-negative p300 have fewer C/EBPα/β-p300 complexes and do not develop age-dependent hepatic steatosis. Notably, the p300-C/EBPα/β pathway is activated in the livers of patients with NAFLD. Thus, our results show that p300 and C/EBP proteins are essential participants in hepatic steatosis.
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- 2013
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8. RNA Foci, CUGBP1, and ZNF9 Are the Primary Targets of the Mutant CUG and CCUG Repeats Expanded in Myotonic Dystrophies Type 1 and Type 2
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Jones, Karlie, Jin, Bingwen, Iakova, Polina, Huichalaf, Claudia, Sarkar, Partha, Schneider-Gold, Christiane, Schoser, Benedikt, Meola, Giovanni, Shyu, Ann-Bin, Timchenko, Nikolai, and Timchenko, Lubov
- Abstract
Expansions of noncoding CUG and CCUG repeats in myotonic dystrophies type 1 (DM1) and DM2 cause complex molecular pathology, the features of which include accumulation of RNA aggregates and misregulation of the RNA-binding proteins muscleblind-like 1 (MBNL1) and CUG-binding protein 1 (CUGBP1). CCUG repeats also decrease amounts of the nucleic acid binding protein ZNF9. Using tetracycline (Tet)–regulated monoclonal cell models that express CUG and CCUG repeats, we found that low levels of long CUG and CCUG repeats result in nuclear and cytoplasmic RNA aggregation with a simultaneous increase of CUGBP1 and a reduction of ZNF9. Elevation of CUGBP1 and reduction of ZNF9 were also observed before strong aggregation of the mutant CUG/CCUG repeats. Degradation of CUG and CCUG repeats normalizes ZNF9 and CUGBP1 levels. Comparison of short and long CUG and CCUG RNAs showed that great expression of short repeats form foci and alter CUGBP1 and ZNF9; however, long CUG/CCUG repeats misregulate CUGBP1 and ZNF9 much faster than high levels of the short repeats. These data suggest that correction of DM1 and DM2 might be achieved by complete and efficient degradation of CUG and CCUG repeats or by a simultaneous disruption of CUG/CCUG foci and correction of CUGBP1 and ZNF9.
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- 2011
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9. Bacteriophage-Based Bioluminescent Bioreporter for the Detection of Escherichia coliO157:H7
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Brigati, Jennifer R., Ripp, Steven A., Johnson, Courtney M., Iakova, Polina A., Jegier, Patricia, and Sayler, Gary S.
- Abstract
The rapid detection of pathogenic bacteria in food and water is vital for the prevention of foodborne illness. In this study, the luxreporter genes were used in a new bioassay that allows pathogen monitoring without multiple sample manipulations or the addition of exogenous substrate. A recombinant phage specific for Escherichia coliO157:H7 was constructed that, upon infection, catalyzes the synthesis of N-(3-oxohexanoyl)-L-homoserine lactone (OHHL). This phage PP01 derivative carries the luxIgene from Vibrio fischeriunder the control of the phage promoter PL. OHHL produced by infected E. coliO157:H7 induces bioluminescence in bioreporter cells carrying the V. fischeri luxoperon. The ability of phage PP01-luxIto detect several strains of E. coliO157:H7 was confirmed in a 96-well plate assay. In this assay, luxCDABEbioreporter cells capable of detecting OHHL were mixed with phage PP01-luxIand E. coliO157:H7, and luminescence was monitored. Reporter phages induced light in bioreporter cells within 1 h when exposed to 104CFU/ml of E. coliO157:H7 and were able to detect 10 CFU/ml in pure culture with a preincubation step (total detection time, 4 h). The detection method was also applied to contaminated apple juice and was able to detect 104CFU/ml of E. coliO157:H7 in 2 h after a 6-h preincubation.
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- 2007
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10. Calreticulin Interacts with C/EBPα and C/EBPβ mRNAs and Represses Translation of C/EBP Proteins
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Timchenko, Lubov T., Iakova, Polina, Welm, Alana L., Cai, Z.-J., and Timchenko, Nikolai A.
- Abstract
ABSTRACTWe previously identified an RNA binding protein, CUGBP1, which binds to GCN repeats located within the 5′ region of C/EBPβ mRNAs and regulates translation of C/EBPβ isoforms. To further investigate the role of RNA binding proteins in the posttranscriptional control of C/EBP proteins, we purified additional RNA binding proteins that interact with GC-rich RNAs and that may regulate RNA processing. In HeLa cells, the majority of GC-rich RNA binding proteins are associated with endogenous RNA transcripts. The separation of these proteins from endogenous RNA identified several proteins in addition to CUGBP1 that specifically interact with the GC-rich 5′ region of C/EBPβ mRNA. One of these proteins was purified to homogeneity and was identified as calreticulin (CRT). CRT is a multifunctional protein involved in several biological processes, including interaction with and regulation of rubella virus RNA processing. Our data demonstrate that both CUGBP1 and CRT interact with GCU repeats within myotonin protein kinase and with GCN repeats within C/EBPα and C/EBPβ mRNAs. GCN repeats within these mRNAs form stable SL structures. The interaction of CRT with SL structures of C/EBPβ and C/EBPα mRNAs leads to inhibition of translation of C/EBP proteins in vitro and in vivo. Deletions or mutations abolishing the formation of SL structures within C/EBPα and C/EBPβ mRNAs lead to a failure of CRT to inhibit translation of C/EBP proteins. CRT-dependent inhibition of C/EBPα is sufficient to block the growth-inhibitory activity of C/EBPα. This finding further defines the molecular mechanism for posttranscriptional regulation of the C/EBPα and C/EBPβ proteins.
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- 2002
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11. Molecular Basis for Impaired Muscle Differentiation in Myotonic Dystrophy
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Timchenko, Nikolai A., Iakova, Polina, Cai, Zong-Jin, Smith, James R., and Timchenko, Lubov T.
- Abstract
ABSTRACTDifferentiation of skeletal muscle is affected in myotonic dystrophy (DM) patients. Analysis of cultured myoblasts from DM patients shows that DM myoblasts lose the capability to withdraw from the cell cycle during differentiation. Our data demonstrate that the expression and activity of the proteins responsible for cell cycle withdrawal are altered in DM muscle cells. Skeletal muscle cells from DM patients fail to induce cytoplasmic levels of a CUG RNA binding protein, CUGBP1, while normal differentiated cells accumulate CUGBP1 in the cytoplasm. In cells from normal patients, CUGBP1 up-regulates p21 protein during differentiation. Several lines of evidence show that CUGBP1 induces the translation of p21 via binding to a GC-rich sequence located within the 5′ region of p21 mRNA. Failure of DM cells to accumulate CUGBP1 in the cytoplasm leads to a significant reduction of p21 and to alterations of other proteins responsible for the cell cycle withdrawal. The activity of cdk4 declines during differentiation of cells from control patients, while in DM cells cdk4 is highly active during all stages of differentiation. In addition, DM cells do not form Rb/E2F repressor complexes that are abundant in differentiated cells from normal patients. Our data provide evidence for an impaired cell cycle withdrawal in DM muscle cells and suggest that alterations in the activity of CUGBP1 causes disruption of p21-dependent control of cell cycle arrest.
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- 2001
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12. C/EBPalpha Arrests Cell Proliferation through Direct Inhibition of Cdk2 and Cdk4
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Wang, H., Iakova, P., Wilde, M., Welm, A., Goode, T., Roesler, J., W., Timchenko, and A., N.
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- 2001
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13. Epigenetic Silencing of MYC By Proteasome Inhibitors
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Catic, Andre, Maneix, Laure, Iakova, Polina, Mistry, Ragini, Stossi, Fabio, Yellapragada, Sarvari Venkata, and Lulla, Premal D.
- Abstract
Proteasome inhibitors were first introduced to the clinic almost 20 years ago and have since become standard of care in multiple myeloma treatment, a cancer of terminally differentiated plasma cells. The proteasome degrades most cellular proteins and identifies targets following ubiquitination by an elaborate enzymatic cascade. Blocking the turnover of proteins with proteasome inhibitors affects many pathways, including signaling, metabolism, and stress responses. Transcriptional and epigenetic regulators are short-lived proteins, and proteasome inhibition is expected to alter gene activity dramatically. However, some of the least understood aspects of proteasome inhibitors involve their effects on epigenetics and transcription. One reason for this knowledge gap is the technical challenge of distinguishing the direct from indirect effects of proteasome inhibition on transcription.
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- 2021
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14. E2F/p107 and E2F/p130 complexes are regulated by C/EBPalpha in 3T3-L1 adipocytes.
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Timchenko, N A, Wilde, M, Iakova, P, Albrecht, J H, and Darlington, G J
- Abstract
We have previously found that loss of C/EBPalpha in hepatocytes of newborn livers leads to increased proliferation, to a reduction in p21 protein levels and to an induction of S phase-specific E2F/p107 complexes. In this paper, we investigated C/EBPalpha-dependent regulation of E2F complexes in a well-characterized cell line, 3T3-L1, and in stable transformants that conditionally express C/EBPalpha. C/EBPalpha and C/EBPbeta proteins are induced in 3T3-L1 preadipocytes during differentiation with different kinetics and potentially may regulate E2F/Rb family complexes. In pre-differentiated cells, three E2F complexes are observed: cdk2/E2F/p107, E2F/p130 and E2F4. cdk2/E2F/p107 complexes are induced in nuclear extracts of 3T3-L1 cells during mitotic expansion, but are not detectable in nuclear extracts at later stages of 3T3-L1 differentiation. The reduction in E2F/p107 complexes is associated with elevation of C/EBPalpha, but is independent of C/EBPbeta expression. Bacterially expressed, purified His-C/EBPalpha is able to disrupt E2F/p107 complexes that are observed at earlier stages of 3T3-L1 differentiation. C/EBPbeta, however, does not disrupt E2F/p107 complexes. A short C/EBPalpha peptide with homology to E2F is sufficient to bring about the disruption of E2F/p107 complexes from 3T3-L1 cells in vitro. Induction of C/EBPalpha in stable 3T3-L1 clones revealed that C/EBPalpha causes disruption of p107/E2F complexes in these cells. In contrast, E2F/p130 complexes are induced in cells expressing C/EBPalpha. Our data suggest that induction of p130/E2F complexes by C/EBPalpha occurs via up-regulation of p21, which, in turn, leads to association with and inhibition of, cdk2 kinase activity. The reduction in cdk2 kinase activity correlates with alterations of p130 phosphorylation and with induction of p130/E2F complexes in 3T3-L1 stable clones. Our data suggest two pathways of C/EBPalpha-dependent regulation of E2F/Rb family complexes: disruption of S phase-specific E2F/p107 complexes and induction of E2F/p130 complexes.
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- 1999
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15. Protein Phase Separation in Hematopoietic Stem Cell Aging
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Maneix, Laure, Iakova, Polina, Moree, Shannon, Sweeney, Melanie, Moka, Nagaishwarya, Yellapragada, Sarvari Venkata, and Catic, Andre
- Abstract
Yellapragada: Novartis: Employment, Other: Spouse Employment ; Celgene: Research Funding; BMS: Research Funding; Takeda: Research Funding.
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- 2019
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16. Dynamic Regulation of Histone Acetylation By Nuclear Proteolysis Controls Cell Cycle Gene Expression and Chromosome Integrity in Multiple Myeloma
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Maneix, Laure, Iakova, Polina, Moree, Shannon, Fletcher, Luke, Lulla, Premal, Yellapragada, Sarvari Venkata, and Catic, Andre
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Transcription factors are generally short-lived proteins that undergo active turnover. The dynamic interaction of transcription factors and co-regulators with promoters and enhancers allows cells to continuously adjust gene expression. Whereas the composition and binding of transcription factors at genomic sites is the focus of a widespread research effort, relatively little is known about how these complexes are being removed by the ubiquitin-proteasome system (UPS).
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- 2017
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17. GSK3β mediates muscle pathology in myotonic dystrophy.
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Jones K, Wei C, Iakova P, Bugiardini E, Schneider-Gold C, Meola G, Woodgett J, Killian J, Timchenko NA, Timchenko LT, Jones, Karlie, Wei, Christina, Iakova, Polina, Bugiardini, Enrico, Schneider-Gold, Christiane, Meola, Giovanni, Woodgett, James, Killian, James, Timchenko, Nikolai A, and Timchenko, Lubov T
- Abstract
Myotonic dystrophy type 1 (DM1) is a complex neuromuscular disease characterized by skeletal muscle wasting, weakness, and myotonia. DM1 is caused by the accumulation of CUG repeats, which alter the biological activities of RNA-binding proteins, including CUG-binding protein 1 (CUGBP1). CUGBP1 is an important skeletal muscle translational regulator that is activated by cyclin D3-dependent kinase 4 (CDK4). Here we show that mutant CUG repeats suppress Cdk4 signaling by increasing the stability and activity of glycogen synthase kinase 3β (GSK3β). Using a mouse model of DM1 (HSA(LR)), we found that CUG repeats in the 3' untranslated region (UTR) of human skeletal actin increase active GSK3β in skeletal muscle of mice, prior to the development of skeletal muscle weakness. Inhibition of GSK3β in both DM1 cell culture and mouse models corrected cyclin D3 levels and reduced muscle weakness and myotonia in DM1 mice. Our data predict that compounds normalizing GSK3β activity might be beneficial for improvement of muscle function in patients with DM1. [ABSTRACT FROM AUTHOR]
- Published
- 2012
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18. Proteasome Inhibitors Silence Oncogenes in Multiple Myeloma through Localized Histone Deacetylase 3 (HDAC3) Stabilization and Chromatin Condensation.
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Maneix L, Iakova P, Moree SE, Hsu JI, Mistry RM, Stossi F, Lulla P, Sun Z, Sahin E, Yellapragada SV, and Catic A
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- Humans, Proteasome Inhibitors pharmacology, Proteasome Endopeptidase Complex metabolism, Genes, myc, Chromatin, Multiple Myeloma drug therapy
- Abstract
Proteasome inhibitors have become the standard of care for multiple myeloma (MM). Blocking protein degradation particularly perturbs the homeostasis of short-lived polypeptides such as transcription factors and epigenetic regulators. To determine how proteasome inhibitors directly impact gene regulation, we performed an integrative genomics study in MM cells. We discovered that proteasome inhibitors reduce the turnover of DNA-associated proteins and repress genes necessary for proliferation through epigenetic silencing. Specifically, proteasome inhibition results in the localized accumulation of histone deacetylase 3 (HDAC3) at defined genomic sites, which reduces H3K27 acetylation and increases chromatin condensation. The loss of active chromatin at super-enhancers critical for MM, including the super-enhancer controlling the proto-oncogene c-MYC, reduces metabolic activity and cancer cell growth. Epigenetic silencing is attenuated by HDAC3 depletion, suggesting a tumor-suppressive element of this deacetylase in the context of proteasome inhibition. In the absence of treatment, HDAC3 is continuously removed from DNA by the ubiquitin ligase SIAH2. Overexpression of SIAH2 increases H3K27 acetylation at c-MYC-controlled genes, increases metabolic output, and accelerates cancer cell proliferation. Our studies indicate a novel therapeutic function of proteasome inhibitors in MM by reshaping the epigenetic landscape in an HDAC3-dependent manner. As a result, blocking the proteasome effectively antagonizes c-MYC and the genes controlled by this proto-oncogene., Competing Interests: Authors’ Disclosures: P.L. is an advisory board member of Karyopharm Therapeutics. All other authors declare they have no competing interests.
- Published
- 2022
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19. Imaging-Based Screening of Deubiquitinating Proteases Identifies Otubain-1 as a Stabilizer of c-MYC.
- Author
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Moree SE, Maneix L, Iakova P, Stossi F, Sahin E, and Catic A
- Abstract
The ubiquitin-proteasome pathway precisely controls the turnover of transcription factors in the nucleus, playing an important role in maintaining appropriate quantities of these regulatory proteins. The transcription factor c-MYC is essential for normal development and is a critical cancer driver. Despite being highly expressed in several tissues and malignancies, the c-MYC protein is also continuously targeted by the ubiquitin-proteasome pathway, which can either facilitate or inhibit c-MYC degradation. Deubiquitinating proteases can remove ubiquitin chains from target proteins and rescue them from proteasomal digestion. This study sought to determine novel elements of the ubiquitin-proteasome pathway that regulate c-MYC levels. We performed an overexpression screen with 41 human proteases to identify which deubiquitinases stabilize c-MYC. We discovered that the highly expressed Otubain-1 (OTUB1) protease increases c-MYC protein levels. Confirming its role in enhancing c-MYC activity, we found that elevated OTUB1 correlates with inferior clinical outcomes in the c-MYC-dependent cancer multiple myeloma, and overexpression of OTUB1 accelerates the growth of myeloma cells. In summary, our study identifies OTUB1 as a novel amplifier of the proto-oncogene c-MYC.
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- 2022
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20. The Mitochondrial Protease LonP1 Promotes Proteasome Inhibitor Resistance in Multiple Myeloma.
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Maneix L, Sweeney MA, Lee S, Iakova P, Moree SE, Sahin E, Lulla P, Yellapragada SV, Tsai FTF, and Catic A
- Abstract
Multiple myeloma and its precursor plasma cell dyscrasias affect 3% of the elderly population in the US. Proteasome inhibitors are an essential part of several standard drug combinations used to treat this incurable cancer. These drugs interfere with the main pathway of protein degradation and lead to the accumulation of damaged proteins inside cells. Despite promising initial responses, multiple myeloma cells eventually become drug resistant in most patients. The biology behind relapsed/refractory multiple myeloma is complex and poorly understood. Several studies provide evidence that in addition to the proteasome, mitochondrial proteases can also contribute to protein quality control outside of mitochondria. We therefore hypothesized that mitochondrial proteases might counterbalance protein degradation in cancer cells treated with proteasome inhibitors. Using clinical and experimental data, we found that overexpression of the mitochondrial matrix protease LonP1 (Lon Peptidase 1) reduces the efficacy of proteasome inhibitors. Some proteasome inhibitors partially crossinhibit LonP1. However, we show that the resistance effect of LonP1 also occurs when using drugs that do not block this protease, suggesting that LonP1 can compensate for loss of proteasome activity. These results indicate that targeting both the proteasome and mitochondrial proteases such as LonP1 could be beneficial for treatment of multiple myeloma.
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- 2021
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21. Ghrelin deletion protects against age-associated hepatic steatosis by downregulating the C/EBPα-p300/DGAT1 pathway.
- Author
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Guillory B, Jawanmardi N, Iakova P, Anderson B, Zang P, Timchenko NA, and Garcia JM
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- Animals, Diacylglycerol O-Acyltransferase drug effects, Diacylglycerol O-Acyltransferase genetics, Down-Regulation, Fatty Liver genetics, Male, Mice, Inbred C57BL, Mice, Knockout, Triglycerides metabolism, Age Factors, Diacylglycerol O-Acyltransferase pharmacology, Fatty Liver metabolism, Ghrelin deficiency
- Abstract
Nonalcoholic fatty liver disease (NAFLD) is the most common liver disease worldwide. NAFLD usually begins as low-grade hepatic steatosis which further progresses in an age-dependent manner to nonalcoholic steatohepatitis (NASH), fibrosis, cirrhosis, and hepatocellular carcinoma in some patients. Ghrelin is a hormone known to promote adiposity in rodents and humans, but its potential role in hepatic steatosis is unknown. We hypothesized that genetic ghrelin deletion will protect against the development of age-related hepatic steatosis. To examine this hypothesis, we utilized ghrelin knockout (KO) mice. Although no different in young animals (3 months old), we found that at 20 months of age, ghrelin KO mice have significantly reduced hepatic steatosis compared to aged-matched wild-type (WT) mice. Examination of molecular pathways by which deletion of ghrelin reduces steatosis showed that the increase in expression of diacylglycerol O-acyltransferase-1 (DGAT1), one of the key enzymes of triglyceride (TG) synthesis, seen with age in WT mice, is not present in KO mice. This was due to the lack of activation of CCAAT/enhancer binding protein-alpha (C/EBPα) protein and subsequent reduction of C/EBPα-p300 complexes. These complexes were abundant in livers of old WT mice and were bound to and activated the DGAT1 promoter. However, the C/EBPα-p300 complexes were not detected on the DGAT1 promoter in livers of old KO mice resulting in lower levels of the enzyme. In conclusion, these studies demonstrate the mechanism by which ghrelin deletion prevents age-associated hepatic steatosis and suggest that targeting this pathway may offer therapeutic benefit for NAFLD., (© 2017 The Authors. Aging Cell published by the Anatomical Society and John Wiley & Sons Ltd.)
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- 2018
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22. RNA Binding Protein CUGBP1 Inhibits Liver Cancer in a Phosphorylation-Dependent Manner.
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Lewis K, Valanejad L, Cast A, Wright M, Wei C, Iakova P, Stock L, Karns R, Timchenko L, and Timchenko N
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- Aging metabolism, Animals, Carcinogenesis metabolism, Carcinogenesis pathology, Child, Diethylnitrosamine, Disease Models, Animal, E2F1 Transcription Factor metabolism, Feedback, Physiological, Gene Deletion, Gene Knock-In Techniques, Humans, Liver metabolism, Liver pathology, Liver physiopathology, Liver Cirrhosis pathology, Liver Neoplasms genetics, Mutant Proteins metabolism, Mutation genetics, Organ Specificity, Phenotype, Phosphorylation, Promoter Regions, Genetic genetics, Proteasome Endopeptidase Complex metabolism, Protein Biosynthesis, Proteolysis, Transcription Factors metabolism, Tumor Suppressor Proteins metabolism, Ubiquitin metabolism, Up-Regulation, CELF1 Protein metabolism, Liver Neoplasms metabolism, Liver Neoplasms pathology
- Abstract
Despite intensive investigations, mechanisms of liver cancer are not known. Here, we identified an important step of liver cancer, which is the neutralization of tumor suppressor activities of an RNA binding protein, CUGBP1. The translational activity of CUGBP1 is activated by dephosphorylation at Ser302. We generated CUGBP1-S302A knock-in mice and found that the reduction of translational activity of CUGBP1 causes development of a fatty liver phenotype in young S302A mice. Examination of liver cancer in diethylnitrosamine (DEN)-treated CUGBP1-S302A mice showed these mice develop much more severe liver cancer that is associated with elimination of the mutant CUGBP1. Searching for mechanisms of this elimination, we found that the oncoprotein gankyrin (Gank) preferentially binds to and triggers degradation of dephosphorylated CUGBP1 (de-ph-S302-CUGBP1) or S302A mutant CUGBP1. To test the role of Gank in degradation of CUGBP1, we generated mice with liver-specific deletion of Gank. In these mice, the tumor suppressor isoform of CUGBP1 is protected from Gank-mediated degradation. Consistent with reduction of CUGBP1 in animal models, CUGBP1 is reduced in patients with pediatric liver cancer. Thus, this work presents evidence that de-ph-S302-CUGBP1 is a tumor suppressor protein and that the Gank-UPS-mediated reduction of CUGBP1 is a key event in the development of liver cancer., (Copyright © 2017 American Society for Microbiology.)
- Published
- 2017
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23. p300 Regulates Liver Functions by Controlling p53 and C/EBP Family Proteins through Multiple Signaling Pathways.
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Breaux M, Lewis K, Valanejad L, Iakova P, Chen F, Mo Q, Medrano E, Timchenko L, and Timchenko N
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- Animals, Apoptosis genetics, CELF1 Protein, Cell Cycle genetics, Cell Cycle Proteins metabolism, Cell Proliferation genetics, DNA Damage genetics, Eukaryotic Initiation Factor-2 genetics, Fatty Liver genetics, Fatty Liver prevention & control, Gene Expression Profiling, Gene Expression Regulation genetics, Hepatocytes cytology, Heterochromatin genetics, Heterochromatin metabolism, Liver surgery, Mice, Mice, Transgenic, Molecular Sequence Data, Protein Biosynthesis genetics, RNA-Binding Proteins genetics, RNA-Binding Proteins metabolism, Signal Transduction genetics, Tumor Suppressor Protein p53 genetics, CCAAT-Enhancer-Binding Proteins metabolism, Carbon Tetrachloride Poisoning pathology, E1A-Associated p300 Protein genetics, Liver metabolism, Tumor Suppressor Protein p53 biosynthesis
- Abstract
The histone acetyltransferase p300 has been implicated in the regulation of liver biology; however, molecular mechanisms of this regulation are not known. In this paper, we examined these mechanisms using transgenic mice expressing a dominant negative p300 molecule (dnp300). While dnp300 mice did not show abnormal growth within 1 year, these mice have many alterations in liver biology and liver functions. We found that the inhibition of p300 leads to the accumulation of heterochromatin foci in the liver of 2-month-old mice. Transcriptome sequencing (RNA-Seq) analysis showed that this inhibition of p300 also causes alterations of gene expression in many signaling pathways, including chromatin remodeling, apoptosis, DNA damage, translation, and activation of the cell cycle. Livers of dnp300 mice have a high rate of proliferation and a much higher rate of proliferation after partial hepatectomy. We found that livers of dnp300 mice are resistant to CCl4-mediated injury and have reduced apoptosis but have increased proliferation after injury. Underlying mechanisms of resistance to liver injury and increased proliferation in dnp300 mice include ubiquitin-proteasome-mediated degradation of C/EBPα and translational repression of the p53 protein by the CUGBP1-eukaryotic initiation factor 2 (eIF2) repressor complex. Our data demonstrate that p300 regulates a number of critical signaling pathways that control liver functions., (Copyright © 2015, American Society for Microbiology. All Rights Reserved.)
- Published
- 2015
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24. Cooperation of C/EBP family proteins and chromatin remodeling proteins is essential for termination of liver regeneration.
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Jin J, Hong IH, Lewis K, Iakova P, Breaux M, Jiang Y, Sullivan E, Jawanmardi N, Timchenko L, and Timchenko NA
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- Animals, Cell Cycle, Chemical and Drug Induced Liver Injury, Glucose-6-Phosphatase metabolism, Hepatectomy, Liver physiology, Male, Mice, Peroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alpha, Phosphoenolpyruvate Carboxykinase (GTP) metabolism, Sirtuin 1 metabolism, Telomerase metabolism, Transcription Factors metabolism, Tumor Suppressor Protein p53 metabolism, CCAAT-Enhancer-Binding Proteins metabolism, Hepatocytes physiology, Histone Deacetylase 1 metabolism, Liver Regeneration
- Abstract
Unlabelled: Liver cancer is the fifth most common cancer. A highly invasive surgical resection of the liver tumor is the main approach used to eliminate the tumor. Mechanisms that terminate liver regeneration when the liver reaches the original size are not known. The aims of this work were to generate an animal model that fails to stop liver regeneration after surgical resections and elucidate mechanisms that are involved in termination of liver regeneration. Because epigenetic control of liver function has been previously implicated in the regulation of liver proliferation, we generated C/EBPα-S193A knockin mice, which have alterations in formation of complexes of C/EBP family proteins with chromatin remodeling proteins. The C/EBPα-S193A mice have altered liver morphology and altered liver function leading to changes of glucose metabolism and blood parameters. Examination of the proliferative capacity of C/EBPα-S193A livers showed that livers of S193A mice have a higher rate of proliferation after birth, but stop proliferation at the age of 2 months. These animals have increased liver proliferation in response to liver surgery as well as carbon tetrachloride (CCl4 )-mediated injury. Importantly, livers of C/EBPα-S193A mice fail to stop liver regeneration after surgery when livers reach the original, preresection, size. The failure of S193A livers to stop regeneration correlates with the epigenetic repression of key regulators of liver proliferation C/EBPα, p53, FXR, SIRT1, PGC1α, and TERT by C/EBPβ-HDAC1 complexes. The C/EBPβ-HDAC1 complexes also repress promoters of enzymes of glucose synthesis PEPCK and G6Pase., Conclusion: Proper cooperation of C/EBP and chromatin remodeling proteins is essential for the termination of liver regeneration after surgery and for maintenance of liver functions., (© 2014 by the American Association for the Study of Liver Diseases.)
- Published
- 2015
- Full Text
- View/download PDF
25. Age-associated change of C/EBP family proteins causes severe liver injury and acceleration of liver proliferation after CCl4 treatments.
- Author
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Hong IH, Lewis K, Iakova P, Jin J, Sullivan E, Jawanmardi N, Timchenko L, and Timchenko N
- Subjects
- Age Factors, Animals, Blotting, Western, CCAAT-Enhancer-Binding Protein-alpha genetics, CCAAT-Enhancer-Binding Protein-beta genetics, Carbon Tetrachloride toxicity, Cell Proliferation drug effects, Chemical and Drug Induced Liver Injury etiology, Chemical and Drug Induced Liver Injury genetics, Gene Expression Regulation, Developmental drug effects, Hepatocytes drug effects, Hepatocytes metabolism, Hepatocytes pathology, Liver drug effects, Liver pathology, Liver Cirrhosis chemically induced, Liver Cirrhosis genetics, Liver Cirrhosis metabolism, Mice, Mice, Knockout, Receptors, Cytoplasmic and Nuclear genetics, Receptors, Cytoplasmic and Nuclear metabolism, Reverse Transcriptase Polymerase Chain Reaction, Severity of Illness Index, Telomerase genetics, Telomerase metabolism, CCAAT-Enhancer-Binding Protein-alpha metabolism, CCAAT-Enhancer-Binding Protein-beta metabolism, Chemical and Drug Induced Liver Injury metabolism, Liver metabolism
- Abstract
The aged liver is more sensitive to the drug treatments and has a high probability of developing liver disorders such as fibrosis, cirrhosis, and cancer. Here we present mechanisms underlying age-associated severe liver injury and acceleration of liver proliferation after CCl4 treatments. We have examined liver response to CCl4 treatments using old WT mice and young C/EBPα-S193D knockin mice, which express an aged-like isoform of C/EBPα. Both animal models have altered chromatin structure as well as increased liver injury and proliferation after acute CCl4 treatments. We found that these age-related changes are associated with the repression of key regulators of liver biology: C/EBPα, Farnesoid X Receptor (FXR) and telomere reverse transcriptase (TERT). In quiescent livers of old WT and young S193D mice, the inhibition of TERT is mediated by HDAC1-C/EBPα complexes. After CCl4 treatments, TERT, C/EBPα and FXR are repressed by different mechanisms. These mechanisms include the increase of a dominant negative isoform, C/EBPβ-LIP, and subsequent repression of C/EBPα, FXR, and TERT promoters. C/EBPβ-LIP also disrupts Rb-E2F1 complexes in C/EBPα-S193D mice after CCl4 treatments. To examine if these alterations are involved in drug-mediated liver diseases, we performed chronic treatments of mice with CCl4. We found that C/EBPα-S193D mice developed fibrosis much more rapidly than WT mice. Thus, our data show that the age-associated alterations of C/EBP proteins create favorable conditions for the increased liver proliferation after CCl4 treatments and for development of drug-mediated liver diseases.
- Published
- 2014
- Full Text
- View/download PDF
26. Farnesoid X receptor directly regulates xenobiotic detoxification genes in the long-lived Little mice.
- Author
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Jiang Y, Jin J, Iakova P, Hernandez JC, Jawanmardi N, Sullivan E, Guo GL, Timchenko NA, and Darlington GJ
- Subjects
- ATP Binding Cassette Transporter, Subfamily B metabolism, Animals, Base Sequence, Cell Line, Cell Line, Tumor, Cell Nucleus metabolism, Dimerization, Female, Gene Expression Regulation, Glutathione Transferase metabolism, Growth Hormone metabolism, Isoenzymes metabolism, Male, Mice, Mice, Mutant Strains, Molecular Sequence Data, Promoter Regions, Genetic, Receptors, Cytoplasmic and Nuclear genetics, Receptors, Neuropeptide genetics, Receptors, Pituitary Hormone-Regulating Hormone genetics, Retinoid X Receptor alpha metabolism, Transcriptional Activation, Longevity, Receptors, Cytoplasmic and Nuclear physiology, Xenobiotics chemistry
- Abstract
Activation of xenobiotic metabolism pathways has been linked to lifespan extension in different models of aging. However, the mechanisms underlying activation of xenobiotic genes remain largely unknown. Here we showed that although farnesoid X receptor (FXR, Nr1h4) mRNA levels do not change significantly, FXR protein levels are elevated in the livers of the long-lived Little mice, leading to increased DNA binding activity of FXR. Hepatic FXR expression is sex-dependent in wild-type mice but not in Little mice, implying that up-regulation of FXR might be dependent on the reduction of growth hormone in Little mice. Growth hormone treatment decreased hepatic expression of FXR and xenobiotic genes Abcb1a, Fmo3 and Gsta2 in both wild-type and Little mice, suggesting an association between FXR and xenobiotic gene expression. We found that Abcb1a is transactivated by FXR via direct binding of FXR/retinoid X receptor α (RXRα) heterodimer to a response element at the proximal promoter. FXR also positively controls Fmo3 and Gsta2 expression through direct interaction with the response elements in these genes. Our study demonstrates that xenobiotic genes are direct transcriptional targets of FXR and suggests that FXR signaling may play a critical role in the lifespan extension observed in Little mice., (Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.)
- Published
- 2013
- Full Text
- View/download PDF
27. Transcriptional and translational regulation of C/EBPβ-HDAC1 protein complexes controls different levels of p53, SIRT1, and PGC1α proteins at the early and late stages of liver cancer.
- Author
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Jin J, Iakova P, Jiang Y, Lewis K, Sullivan E, Jawanmardi N, Donehower L, Timchenko L, and Timchenko NA
- Subjects
- Animals, Base Sequence, Cell Proliferation, Diethylnitrosamine pharmacology, Epigenesis, Genetic, Gene Expression Profiling, Gene Expression Regulation, Neoplastic, Heat-Shock Proteins metabolism, Humans, Liver Neoplasms chemically induced, Mice, Models, Biological, Molecular Sequence Data, Peroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alpha, Transcription Factors metabolism, Transcriptional Activation, CCAAT-Enhancer-Binding Protein-beta metabolism, Histone Deacetylase 1 metabolism, Liver Neoplasms metabolism, Sirtuin 1 metabolism, Trans-Activators metabolism, Tumor Suppressor Protein p53 metabolism
- Abstract
Cancer changes biological processes in the liver by altering gene expression at the levels of transcription, translation, and protein modification. The RNA binding protein CUGBP1 is a key regulator of translation of CCAAT enhancer binding protein β and histone deacetylase 1 (HDAC1). These proteins form complexes that are involved in the regulation of liver biology. Here we show a critical role of the translational activation of CCAAT/enhancer binding protein β-HDAC1 complexes in the development of liver cancer mediated by diethylnitrosamine. We found that diethylnitrosamine increases the levels of CUGBP1 and activates CUGBP1 by phosphorylation, leading to the formation of the CUGBP1-eIF2 complex, which is an activator of translation of CUGBP1-dependent mRNAs. The elevation of the CUGBP1-eIF2 complex increases translation of C/EBPβ and HDAC1, resulting in an increase of C/EBPβ-HDAC1 complexes at later stages of liver cancer. We found that C/EBPβ-HDAC1 complexes repress promoters of three key regulators of liver functions: p53, SIRT1, and PGC1α. As the result of this suppression, the p53-, SIRT1-, and PGC1α-dependent downstream pathways are reduced, leading to increased liver proliferation. We also found that the proper regulation of C/EBPβ-HDAC1 complexes is required for the maintenance of biological levels of p53, SIRT1, and PGC1α in quiescent livers and at early stages of liver cancer. Taken together, these studies showed that the development of liver cancer includes a tight regulation of levels of C/EBPβ-HDAC1 complexes on the levels of transcription, translation, and posttranslational modifications.
- Published
- 2013
- Full Text
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28. Farnesoid X receptor inhibits gankyrin in mouse livers and prevents development of liver cancer.
- Author
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Jiang Y, Iakova P, Jin J, Sullivan E, Sharin V, Hong IH, Anakk S, Mayor A, Darlington G, Finegold M, Moore D, and Timchenko NA
- Subjects
- Animals, Base Sequence, CCAAT-Enhancer-Binding Protein-alpha metabolism, CCAAT-Enhancer-Binding Protein-beta metabolism, Carcinoma, Hepatocellular genetics, Carcinoma, Hepatocellular metabolism, Cell Line, Tumor, Histone Deacetylase 1 metabolism, Humans, Liver Neoplasms genetics, Liver Neoplasms metabolism, Mice, Mice, Inbred Strains, Mice, Knockout, Molecular Sequence Data, Promoter Regions, Genetic physiology, Proteasome Endopeptidase Complex genetics, Proteasome Endopeptidase Complex metabolism, Proto-Oncogene Proteins genetics, Proto-Oncogene Proteins metabolism, RNA, Small Interfering genetics, Receptors, Cytoplasmic and Nuclear genetics, Transcription Factors metabolism, Carcinoma, Hepatocellular physiopathology, Gene Expression Regulation, Neoplastic physiology, Liver Neoplasms physiopathology, Receptors, Cytoplasmic and Nuclear metabolism, Transcription Factors genetics
- Abstract
Unlabelled: One of the early events in the development of liver cancer is a neutralization of tumor suppressor proteins Rb, p53, hepatocyte nuclear factor 4α (HNF4α), and CCAAT/enhancer binding protein (C/EBP) α. The elimination of these proteins is mediated by a small subunit of proteasome, gankyrin, which is activated by cancer. The aim of this study was to determine the mechanisms that repress gankyrin in quiescent livers and mechanisms of activation of gankyrin in liver cancer. We found that farnesoid X receptor (FXR) inhibits expression of gankyrin in quiescent livers by silencing the gankyrin promoter through HDAC1-C/EBPβ complexes. C/EBPβ is a key transcription factor that delivers HDAC1 to gankyrin promoter and causes epigenetic silencing of the promoter. We show that down-regulation of C/EBPβ in mouse hepatoma cells and in mouse livers reduces C/EBPβ-HDAC1 complexes and activates the gankyrin promoter. Deletion of FXR signaling in mice leads to de-repression of the gankyrin promoter and to spontaneous development of liver cancer at 12 months of age. Diethylnitrosoamine (DEN)-mediated liver cancer in wild-type mice also involves the reduction of FXR and activation of gankyrin. Examination of liver cancer in old mice and liver cancer in human patients revealed that FXR is reduced, while gankyrin is elevated during spontaneous development of liver cancer. Searching for animal models with altered levels of FXR, we found that long-lived Little mice have high levels of FXR and do not develop liver cancer with age and after DEN injections due to failure to activate gankyrin and eliminate Rb, p53, HNF4α and C/EBPα proteins., Conclusion: FXR prevents liver cancer by inhibiting the gankyrin promoter via C/EBPβ-HDAC1 complexes, leading to subsequent protection of tumor suppressor proteins from degradation., (Copyright © 2012 American Association for the Study of Liver Diseases.)
- Published
- 2013
- Full Text
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29. The reduction of SIRT1 in livers of old mice leads to impaired body homeostasis and to inhibition of liver proliferation.
- Author
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Jin J, Iakova P, Jiang Y, Medrano EE, and Timchenko NA
- Subjects
- Animals, CCAAT-Enhancer-Binding Protein-beta physiology, E2F Transcription Factors physiology, Glucose metabolism, Hepatectomy, Histone Deacetylase 1 physiology, Mice, Promoter Regions, Genetic, Sirtuin 1 analysis, Sirtuin 1 genetics, Triglycerides metabolism, Aging physiology, Cell Proliferation, Homeostasis, Liver Regeneration, Sirtuin 1 physiology
- Abstract
Age declines liver functions, leading to the development of age-associated diseases. A member of the sirtuins family, SIRT1, is involved in the control of glucose homeostasis and fat metabolism. Because aging livers have alterations in glucose and fat metabolism, we examined a possible role of SIRT1 in these alterations. We found that aged livers have a reduced expression of SIRT1 and have lost proper control of the regulation of SIRT1 after partial hepatectomy (PH). Down-regulation of SIRT1 in the liver of old mice is mediated by CCAAT/Enhancer Binding Protein/histone deacetylase 1 (C/EBPβ-HDAC1) complexes, which bind to and repress the SIRT1 promoter. In the livers of young mice, SIRT1 is activated after PH and supports high levels of glucose and triglycerides during liver regeneration. In old mice, however, C/EBPβ-HDAC1-mediated repression of the SIRT1 promoter blocks activation of SIRT1, leading to low levels of glucose and triglycerides during liver regeneration. Down-regulation of SIRT1 in the livers of young mice resulted in alterations similar to those observed in the livers of old mice, whereas the normalization of SIRT1 in the livers of old mice corrects the levels of glucose and triglycerides after PH. The normalization of SIRT1 in old mice also improves liver regeneration via the elimination of the C/EBPα-Brm complex. These studies showed a critical role of the reduction of SIRT1 in age-associated liver dysfunctions and provide a potential tool for the correction of liver functions in old patients after surgical resections., (Copyright © 2011 American Association for the Study of Liver Diseases.)
- Published
- 2011
- Full Text
- View/download PDF
30. Intracellular signaling and hepatocellular carcinoma.
- Author
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Iakova P, Timchenko L, and Timchenko NA
- Subjects
- Animals, CCAAT-Enhancer-Binding Proteins metabolism, Disease Models, Animal, Humans, Mice, Mice, Knockout, Proteasome Endopeptidase Complex metabolism, RNA-Binding Proteins genetics, Retinoblastoma Protein metabolism, Tumor Suppressor Protein p53 genetics, Tumor Suppressor Protein p53 metabolism, Carcinoma, Hepatocellular metabolism, Intracellular Space metabolism, Liver Neoplasms metabolism, Signal Transduction
- Abstract
Liver cancer is the fifth most common cancer and the third most common cause of cancer related death in the world. The recent development of new techniques for the investigations of global change in the gene expression, signaling pathways and wide genome binding has provided novel information for the mechanisms underlying liver cancer progression. Although these studies identified gene expression signatures in hepatocellular carcinoma, the early steps of the development of hepatocellular carcinomas (HCC) are not well understood. The development of HCC is a multistep process which includes the progressive alterations of gene expression leading to the increased proliferation and to liver cancer. This review summarizes recent progress in the identification of the key steps of the development of HCC with the focus on early events of carcinogenesis and on the role of translational and epigenetic alterations in the development of HCC. Quiescent stage of the liver is supported by several tumor suppressor proteins including p53, Rb and C/EBPα. Studies with chemical models of liver carcinogenesis and with human HCC have shown that the elevation of gankyrin is responsible for the elimination of these three proteins at early steps of carcinogenesis. Later stages of progression of the liver cancer are associated with alterations in many signaling pathways including translation which leads to epigenetic silencing/activation of many genes. Particularly, recent reports suggest a critical role of histone deacetylase 1, HDAC1, in the development of HCC through the interactions with transcription factors such as C/EBP family proteins., (Copyright © 2010 Elsevier Ltd. All rights reserved.)
- Published
- 2011
- Full Text
- View/download PDF
31. Epigenetic changes play critical role in age-associated dysfunctions of the liver.
- Author
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Jin J, Wang GL, Iakova P, Shi X, Haefliger S, Finegold M, and Timchenko NA
- Subjects
- Animals, CCAAT-Enhancer-Binding Protein-beta metabolism, Cell Proliferation, Chromatin genetics, Chromatin metabolism, Cyclin D1 genetics, Cyclin D2 genetics, Mice, Mice, Transgenic, Mutation, Promoter Regions, Genetic genetics, Aging genetics, CCAAT-Enhancer-Binding Protein-alpha metabolism, Epigenesis, Genetic genetics, Liver metabolism, Liver physiopathology
- Abstract
CCAAT/Enhancer Binding Proteins family proteins are important regulators of liver functions. Here, we show the critical role of C/EBPα-mediated chromatin remodeling in the age-associated dysfunctions of the liver and in the maintenance of physiological homeostasis. Because ph-S193 isoform of C/EBPα is increased in livers of old mice, we have generated C/EBPα-S193D knockin mice, which mimic the ph-S193 isoform of C/EBPα. Analyses of these mice showed that the S193D mutation causes chromatin remodeling leading to histological appearance of 'foci-like' nodules, which are also observed in livers of old mice. These 'foci-like' structures contain K9 trimethylated histone H3, a marker of heterochromatin. The increase of heterochromatin regions in S193D mice correlates with the elevation of S193D-C/EBPα-HDAC1 complexes and with dys-regulation of gene expression including epigenetic silencing of cyclin D1 and D2 promoters and the inhibition of liver proliferation. The elimination of C/EBPα-HDAC1 complexes in S193D mice by inhibition of HDAC1 corrects chromatin structure and normalizes expression of cyclin D1 and D2. We found that epigenetic dys-regulation is also associated with the elevation of C/EBPβ and with the increase of C/EBPα/β heterodimers in S193D mice. The C/EBPα/β heterodimers activate transcription of Glut4 and increase the levels of Glut4. As the result, S193D livers have accelerated uptake of glucose and accumulation of glycogen in the liver. Thus, this study demonstrates that the phosphorylation of C/EBPα at S193 leads to the appearance of heterochromatin regions, which correlates with the development of age-related dysfunctions of the liver., (© 2010 The Authors Aging Cell © 2010 Blackwell Publishing Ltd/Anatomical Society of Great Britain and Ireland.)
- Published
- 2010
- Full Text
- View/download PDF
32. Calmodulin controls liver proliferation via interactions with C/EBPbeta-LAP and C/EBPbeta-LIP.
- Author
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Orellana D, Liu X, Wang GL, Jin J, Iakova P, and Timchenko NA
- Subjects
- Acute-Phase Reaction metabolism, Acute-Phase Reaction pathology, Animals, Calcium metabolism, Cell Cycle Proteins genetics, Cell Line, Cell Nucleus drug effects, Cell Nucleus metabolism, Cell Proliferation drug effects, Down-Regulation drug effects, E2F Transcription Factors metabolism, Humans, Lipopolysaccharides pharmacology, Liver drug effects, Mice, Promoter Regions, Genetic genetics, Protein Binding, Retinoblastoma Protein metabolism, Trans-Activators genetics, CCAAT-Enhancer-Binding Protein-beta metabolism, Calmodulin metabolism, Liver cytology, Liver metabolism
- Abstract
A truncated isoform of C/EBPbeta, C/EBPbeta-LIP, is required for liver proliferation. This isoform is expressed at high levels in proliferating liver and in liver tumors. However, high levels of C/EBPbeta-LIP are also observed in non-proliferating livers during acute phase response (APR). In this paper we present mechanisms by which liver regulates activities of C/EBPbeta-LIP. We found that calmodulin (CaM) inhibits the ability of C/EBPbeta-LIP to promote liver proliferation during APR through direct interactions. This activity of CaM is under negative control of Ca(2+), which is reduced in nuclei of livers with APR, whereas it is increased in nuclei of proliferating livers. A mutant CaM, which does not interact with C/EBPbeta-LIP, also fails to inhibit the growth promotion activity of C/EBPbeta-LIP. Down-regulation of CaM in livers of LPS-treated mice causes liver proliferation via activation of C/EBPbeta-LIP. Overexpression of C/EBPbeta-LIP above levels of CaM also initiates liver proliferation in LPS-treated mice. In addition, CaM regulates transcriptional activity of another isoform of C/EBPbeta, C/EBPbeta-LAP, and might control liver biology through the regulation of both isoforms of C/EBPbeta. In searching for molecular mechanisms by which C/EBPbeta-LIP promotes cell proliferation, we found that C/EBPbeta-LIP releases E2F.Rb-dependent repression of cell cycle genes by a disruption of E2F1.Rb complexes and by a direct interaction with E2F-dependent promoters. CaM inhibits these growth promotion activities of C/EBPbeta-LIP and, therefore, supports liver quiescence. Thus, our findings discover a new pathway of the regulation of liver proliferation that involves calcium-CaM signaling.
- Published
- 2010
- Full Text
- View/download PDF
33. Elimination of C/EBPalpha through the ubiquitin-proteasome system promotes the development of liver cancer in mice.
- Author
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Wang GL, Shi X, Haefliger S, Jin J, Major A, Iakova P, Finegold M, and Timchenko NA
- Subjects
- Animals, Hepatectomy, Liver Neoplasms genetics, Liver Neoplasms metabolism, Mice, Mice, Knockout, Phosphorylation, Proteasome Endopeptidase Complex genetics, Proteasome Endopeptidase Complex metabolism, Protein Isoforms genetics, Protein Isoforms metabolism, Proto-Oncogene Proteins, Serine genetics, Serine metabolism, Transcription Factors genetics, Ubiquitin genetics, Ubiquitin metabolism, Liver metabolism, Transcription Factors metabolism
- Abstract
Despite significant advancements in our understanding of cancer development, the molecular mechanisms that underlie the formation of liver cancer remain largely unknown. C/EBPalpha is a transcription factor that regulates liver quiescence. Phosphorylation of C/EBPalpha at serine 193 (S193-ph) is upregulated in older mice and is thought to contribute to age-associated liver dysfunction. Because development of liver tumors is associated with increasing age, we investigated the role of S193-ph in the development of liver cancer using knockin mice expressing a phospho-mimetic aspartic acid residue in place of serine at position 193 (S193D) of C/EBPalpha. The S193D isoform of C/EBPalpha was able to completely inhibit liver proliferation in vivo after partial hepatectomy. However, treatment of these mice with diethylnitrosamine/phenobarbital (DEN/PB), which induces formation of liver cancer, actually resulted in earlier development of liver tumors. DEN/PB treatment was associated with specific degradation of both the S193-ph and S193D isoforms of C/EBPalpha through activation of the ubiquitinproteasome system (UPS). The mechanism of UPS-mediated elimination of C/EBPalpha during carcinogenesis involved elevated levels of gankyrin, a protein that was found to interact with the S193-ph isoform of C/EBPalpha and target it for UPS-mediated degradation. This study identifies a molecular mechanism that supports the development of liver cancer in older mice and potential therapeutic targets for the prevention of liver cancer.
- Published
- 2010
- Full Text
- View/download PDF
34. Liver tumors escape negative control of proliferation via PI3K/Akt-mediated block of C/EBP alpha growth inhibitory activity.
- Author
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Wang GL, Iakova P, Wilde M, Awad S, and Timchenko NA
- Subjects
- 3T3-L1 Cells, Animals, CCAAT-Enhancer-Binding Protein-alpha genetics, Carcinoma, Hepatocellular metabolism, Cell Division physiology, Humans, Mice, Mutation, Proto-Oncogene Proteins c-akt, Transcription Factors metabolism, Tumor Cells, Cultured, CCAAT-Enhancer-Binding Protein-alpha metabolism, Liver Neoplasms metabolism, Phosphatidylinositol 3-Kinases metabolism, Protein Serine-Threonine Kinases, Proto-Oncogene Proteins metabolism
- Abstract
Liver tumor cells arise from normal hepatocytes that escape negative control of proliferation. The transcription factor C/EBPalpha maintains quiescence of hepatocytes through two pathways: inhibition of cdks and repression of E2F. Nevertheless, liver tumors and cultured hepatoma cell lines proliferate in the presence of C/EBPalpha. In this paper, we present evidence that the activation of the PI3K/Akt pathway in liver tumor cells blocks the growth inhibitory activity of C/EBPalpha through the PP2A-mediated dephosphorylation of C/EBPalpha on Ser 193, leading to a failure of C/EBPalpha to interact with and inhibit cdks and E2F. Mutation of Ser 193 to Ala also abolishes the ability of C/EBPalpha to cause growth arrest because of a lack of interactions with cdk2 and E2F-Rb complexes. These data provide a molecular basis for the development of liver tumors in which the activation of PI3K/Akt pathway neutralizes C/EBPalpha growth inhibitory activity.
- Published
- 2004
- Full Text
- View/download PDF
35. Overexpression of CUG triplet repeat-binding protein, CUGBP1, in mice inhibits myogenesis.
- Author
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Timchenko NA, Patel R, Iakova P, Cai ZJ, Quan L, and Timchenko LT
- Subjects
- Animals, Blotting, Northern, Blotting, Western, Body Weight, CELF1 Protein, Cell-Free System metabolism, Cells, Cultured, Cross-Linking Reagents pharmacology, DNA-Binding Proteins chemistry, Fibroblasts metabolism, Genotype, Humans, Immunohistochemistry, MADS Domain Proteins, MEF2 Transcription Factors, Mice, Mice, Transgenic, Models, Biological, Muscle, Skeletal metabolism, Muscles cytology, Myogenic Regulatory Factors, Myotonic Dystrophy metabolism, Plasmids metabolism, Protein Binding, Protein Biosynthesis, Proto-Oncogene Proteins p21(ras) metabolism, RNA chemistry, RNA, Messenger metabolism, RNA, Small Interfering metabolism, RNA-Binding Proteins chemistry, Transcription Factors chemistry, Transgenes, Ultraviolet Rays, Up-Regulation, Muscles metabolism, RNA-Binding Proteins biosynthesis
- Abstract
Accumulation of RNA CUG repeats in myotonic dystrophy type 1 (DM1) patients leads to the induction of a CUG-binding protein, CUGBP1, which increases translation of several proteins that are required for myogenesis. In this paper, we examine the role of overexpression of CUGBP1 in DM1 muscle pathology using transgenic mice that overexpress CUGBP1 in skeletal muscle. Our data demonstrate that the elevation of CUGBP1 in skeletal muscle causes overexpression of MEF2A and p21 to levels that are significantly higher than those in skeletal muscle of wild type animals. A similar induction of these proteins is observed in skeletal muscle of DM1 patients with increased levels of CUGBP1. Immunohistological analysis showed that the skeletal muscle from mice overexpressing CUGBP1 is characterized by a developmental delay, muscular dystrophy, and myofiber-type switch: increase of slow/oxidative fibers and the reduction of fast fibers. Examination of molecular mechanisms by which CUGBP1 up-regulates MEF2A shows that CUGBP1 increases translation of MEF2A via direct interaction with GCN repeats located within MEF2A mRNA. Our data suggest that CUGBP1-mediated overexpression of MEF2A and p21 inhibits myogenesis and contributes to the development of muscle deficiency in DM1 patients.
- Published
- 2004
- Full Text
- View/download PDF
36. Aging reduces proliferative capacities of liver by switching pathways of C/EBPalpha growth arrest.
- Author
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Iakova P, Awad SS, and Timchenko NA
- Subjects
- Animals, CCAAT-Enhancer-Binding Protein-alpha genetics, Cell Division genetics, Cyclin-Dependent Kinases genetics, DNA-Binding Proteins genetics, DNA-Binding Proteins metabolism, E2F4 Transcription Factor, Gene Expression Regulation, Developmental genetics, Genes, Regulator genetics, Genes, myc genetics, Hepatocytes cytology, Liver cytology, Macromolecular Substances, Molecular Weight, Promoter Regions, Genetic genetics, Rats, Rats, Inbred F344, Repressor Proteins genetics, Repressor Proteins metabolism, Retinoblastoma Protein genetics, Retinoblastoma Protein metabolism, Signal Transduction genetics, Transcription Factors genetics, Transcription Factors metabolism, Aging metabolism, CCAAT-Enhancer-Binding Protein-alpha metabolism, Hepatocytes enzymology, Liver enzymology, Liver growth & development, Liver Regeneration genetics
- Abstract
The liver is capable of completely regenerating itself in response to injury and after partial hepatectomy. In liver of old animals, the proliferative response is dramatically reduced, the mechanism for which is unknown. The liver specific protein, C/EBPalpha, normally arrests proliferation of hepatocytes through inhibiting cyclin dependent kinases (cdks). We present evidence that aging switches the liver-specific pathway of C/EBPalpha growth arrest to repression of E2F transcription. We identified an age-specific C/EBPalpha-Rb-E2F4 complex that binds to E2F-dependent promoters and represses these genes. The C/EBPalpha-Rb-E2F4 complex occupies the c-myc promoter and blocks induction of c-myc in livers of old animals after partial hepatectomy. Our results show that the age-dependent switch from cdk inhibition to repression of E2F transcription causes a loss of proliferative response in the liver because of an inability to induce E2F target genes after partial hepatectomy providing a possible mechanism for the age-dependent loss of liver regenerative capacity.
- Published
- 2003
- Full Text
- View/download PDF
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