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Cameras are frequently deployed along with many additional sensors in aerial and ground-based platforms. Many video datasets have metadata containing measurements from inertial sensors, GPS units, etc. Hence the development of better video processing algorithms using additional information attains special significance. We first describe an intensity-based algorithm for stabilizing low resolution and low quality aerial videos. The primary contribution is the idea of minimizing the discrepancy in the intensity of selected pixels between two images. This is an application of inverse compositional alignment for registering images of low resolution and low quality, for which minimizing the intensity difference over salient pixels with high gradients results in faster and better convergence than when using all the pixels. Secondly, we describe a feature-based method for stabilization of aerial videos and segmentation of small moving objects. We use the coherency of background motion to jointly track features through the sequence. This enables accurate tracking of large numbers of features in the presence of repetitive texture, lack of well conditioned feature windows etc. We incorporate the segmentation problem within the joint feature tracking framework and propose the first combined joint-tracking and segmentation algorithm. The proposed approach enables highly accurate tracking, and segmentation of feature tracks that is used in a MAP-MRF framework for obtaining dense pixelwise labeling of the scene. We demonstrate competitive moving object detection in challenging video sequences of the VIVID dataset containing moving vehicles and humans that are small enough to cause background subtraction approaches to fail. Structure from Motion (SfM) has matured to a stage, where the emphasis is on developing fast, scalable and robust algorithms for large reconstruction problems. The availability of additional sensors such as inertial units and GPS along with video cameras motivat