122,374 results on '"clinical sciences"'
Search Results
2. Two-day cardiopulmonary exercise testing in long COVID post-exertional malaise diagnosis
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Gattoni, Chiara, Abbasi, Asghar, Ferguson, Carrie, Lanks, Charles W, Decato, Thomas W, Rossiter, Harry B, Casaburi, Richard, and Stringer, William W
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Biomedical and Clinical Sciences ,Clinical Sciences ,Physical Activity ,Lung ,Cardiovascular ,Chronic Fatigue Syndrome (ME/CFS) ,Clinical Research ,Women's Health ,6.7 Physical ,4.2 Evaluation of markers and technologies ,Humans ,Female ,Male ,Middle Aged ,COVID-19 ,Exercise Test ,Adult ,Oxygen Consumption ,Post-Acute COVID-19 Syndrome ,Aged ,Respiratory Function Tests ,Exercise Tolerance ,Cardiopulmonary exercise testing ,PEM ,Exercise tolerance ,Long COVID ,Fatigue ,Deconditioning ,Cardiorespiratory Medicine and Haematology ,Neurosciences ,Medical Physiology ,Physiology ,Cardiovascular medicine and haematology ,Medical physiology - Abstract
BackgroundLong COVID patients present with a myriad of symptoms that can include fatigue, exercise intolerance and post exertional malaise (PEM). Long COVID has been compared to other post viral syndromes, including myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS), where a reduction in day 2 cardiopulmonary exercise test (CPET) performance of a two-day CPET protocol is suggested to be a result of PEM. We investigated cardiopulmonary and perceptual responses to a two-day CPET protocol in Long COVID patients.Methods15 Long COVID patients [n=7 females; mean (SD) age: 53(11) yr; BMI = 32.2(8.5) kg/m2] performed a pulmonary function test and two ramp-incremental CPETs separated by 24 hr. CPET variables included gas exchange threshold (GET), peak oxygen uptake (V̇O2peak) and peak work rate (WRpeak). Ratings of perceived dyspnoea and leg effort were recorded at peak exercise using the modified 0-10 Borg Scale. PEM (past six months) was assessed using the modified DePaul Symptom Questionnaire (mDSQ). One-sample t-tests were used to test significance of mean difference between days (p0.05).ConclusionPEM symptoms in Long COVID patients, in the absence of differences in two-day CPET responses separated by 24 hours, suggests that PEM is not due to impaired recovery of exercise capacity between days.
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- 2025
3. Deep sequencing as a diagnostic tool in patients with suspected primary vitreoretinal lymphoma
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Choo, Charlene, Cote, Olivia, Bostwick, Karina, Regueiro, Matthew, Wells, Jill, Grossniklaus, Hans E, Gonzales, John, Yeh, Steven, Hinterwirth, Armin, Doan, Thuy, and Shantha, Jessica G
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Ophthalmology and Optometry ,Lymphoma ,Clinical Research ,Cancer ,Eye Disease and Disorders of Vision ,Lymphatic Research ,Rare Diseases ,Hematology ,4.2 Evaluation of markers and technologies ,2.1 Biological and endogenous factors ,4.1 Discovery and preclinical testing of markers and technologies ,Humans ,Male ,Female ,Retinal Neoplasms ,Retrospective Studies ,Middle Aged ,Aged ,Vitreous Body ,High-Throughput Nucleotide Sequencing ,Flow Cytometry ,Intraocular Lymphoma ,Vitrectomy ,Polymerase Chain Reaction ,Aged ,80 and over ,Adult ,Metagenomics ,Diagnostic tests/Investigation ,Inflammation ,Neoplasia ,Genetics ,Ophthalmologic Surgical Procedures ,Clinical Sciences ,Opthalmology and Optometry ,Public Health and Health Services ,Ophthalmology & Optometry ,Clinical sciences ,Ophthalmology and optometry - Abstract
PurposeTo compare the diagnostic utility of metagenomic deep sequencing (MDS) to cytology, flow cytometry and gene rearrangement by PCR in ocular samples of patients with suspected vitreoretinal lymphoma (VRL).MethodsPatients with suspected VRL underwent ocular sampling of one or both eyes at the Emory Eye Center from September 2017 to June 2022. Ocular samples were evaluated with MDS and conventional diagnostics. MDS was performed at the Ralph and Sophie Heintz Laboratory at the F.I. Proctor Foundation. Relevant demographic and clinical data were retrospectively collected from medical records. Patients were diagnosed with VRL based on clinical assessment and conventional diagnostic testing.ResultsThis study included 13 patients with suspected VRL who underwent diagnostic vitrectomy, including 1 patient who had an additional subretinal biopsy. Six patients (46.2%) were diagnosed with VRL. Among patients diagnosed with VRL, MDS detected pathogenic mutations in 5 out of 6 patients (83.3%) while cytology was positive for VRL in 4 out of 6 patients (66.7%), flow cytometry in 4 out of 4 patients (100.0%) and PCR in 4 out of 4 patients (100.0%). MDS detected mutations in MYD88 in 2 out of 6 patients diagnosed with VRL. In 7 patients (53.8%) not diagnosed with VRL, MDS detected pathogenic lymphoma mutations in 2 patients (28.6%).DiscussionMDS detected pathogenic mutations in five out of six patients diagnosed with VRL, including in two patients with negative cytology, demonstrating its potential to improve diagnostic rates of VRL as an adjunctive test.
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- 2025
4. Combination SGLT2 Inhibitor and Glucagon Receptor Antagonist Therapy in Type 1 Diabetes: A Randomized Clinical Trial
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Boeder, Schafer C, Thomas, Robert L, Le Roux, Melissa J, Giovannetti, Erin R, Gregory, Justin M, and Pettus, Jeremy H
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Biomedical and Clinical Sciences ,Clinical Sciences ,Clinical Research ,Diabetes ,Clinical Trials and Supportive Activities ,Autoimmune Disease ,6.1 Pharmaceuticals ,5.1 Pharmaceuticals ,Metabolic and endocrine ,Humans ,Diabetes Mellitus ,Type 1 ,Sodium-Glucose Transporter 2 Inhibitors ,Male ,Female ,Adult ,Blood Glucose ,Hypoglycemic Agents ,Middle Aged ,Double-Blind Method ,Cross-Over Studies ,Insulin ,Receptors ,Glucagon ,Benzhydryl Compounds ,Glucosides ,Drug Therapy ,Combination ,Medical and Health Sciences ,Endocrinology & Metabolism ,Biomedical and clinical sciences ,Health sciences - Abstract
ObjectiveTo examine the effects of insulin-adjunctive therapy with a sodium-glucose cotransporter 2 (SGLT2) inhibitor and a glucagon receptor antagonist (GRA) on glycemia, insulin use, and ketogenesis during insulinopenia in type 1 diabetes.Research design and methodsIn a randomized, double-blind, placebo-controlled, crossover trial we assessed the effects of adjunctive SGLT2 inhibitor therapy (dapagliflozin 10 mg daily) alone and in combination with the GRA volagidemab (70 mg weekly) in 12 adults with type 1 diabetes. Continuous glucose monitoring, insulin dosing, and insulin withdrawal tests (IWT) for measurement of glucose and ketogenesis during insulinopenia were completed during insulin-only (Baseline), SGLT2 inhibitor, and combination (SGLT2 inhibitor + GRA) therapy periods.ResultsAverage glucose and percent time with glucose in range (70-180 mg/dL) improved with combination therapy versus Baseline and SGLT2 inhibitor (131 vs. 150 and 138 mg/dL [P < 0.001 and P = 0.01] and 86% vs. 70% and 78% [P < 0.001 and P = 0.03], respectively) without increased hypoglycemia. Total daily insulin use decreased with combination therapy versus Baseline and SGLT2 inhibitor (0.41 vs. 0.56 and 0.52 units/kg/day [P < 0.001 and P = 0.002]). Peak β-hydroxybutyrate levels during IWT were lower with combination therapy than with SGLT2 inhibitor (2.0 vs. 2.4 mmol/L; P = 0.048) and similar to levels reached during the Baseline testing period (2.1 mmol/L). Participants reported enhanced treatment acceptability and satisfaction with combination therapy.ConclusionsGlucagon antagonism enhances the therapeutic effects of SGLT2 inhibition in type 1 diabetes. Combination therapy improves glycemic control, reduces insulin dosing, and suggests a strategy to unlock the benefits of SGLT2 inhibitors while mitigating the risk of diabetic ketoacidosis.
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- 2025
5. Faecal proteomics links neutrophil degranulation with mortality in patients with alcohol-associated hepatitis
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Kreimeyer, Henriette, Gonzalez, Carlos G, Fondevila, Marcos F, Hsu, Cynthia L, Hartmann, Phillipp, Zhang, Xinlian, Stärkel, Peter, Bosques-Padilla, Francisco, Verna, Elizabeth C, Abraldes, Juan G, Brown, Robert S, Vargas, Victor, Altamirano, Jose, Caballería, Juan, Shawcross, Debbie L, Louvet, Alexandre, Lucey, Michael R, Mathurin, Philippe, Garcia-Tsao, Guadalupe, Bataller, Ramón, Investigators, AlcHepNet, Gonzalez, David J, and Schnabl, Bernd
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Biomedical and Clinical Sciences ,Clinical Sciences ,Nutrition and Dietetics ,Liver Disease ,Hepatitis ,Clinical Research ,Digestive Diseases ,Precision Medicine ,Substance Misuse ,Chronic Liver Disease and Cirrhosis ,Alcoholism ,Alcohol Use and Health ,Biotechnology ,Women's Health ,2.1 Biological and endogenous factors ,Oral and gastrointestinal ,Good Health and Well Being ,Humans ,Feces ,Male ,Hepatitis ,Alcoholic ,Female ,Proteomics ,Middle Aged ,Neutrophils ,Biomarkers ,Cell Degranulation ,Adult ,Prognosis ,Case-Control Studies ,ALCOHOLIC LIVER DISEASE ,ALCOHOL-INDUCED INJURY ,Paediatrics and Reproductive Medicine ,Gastroenterology & Hepatology ,Clinical sciences ,Nutrition and dietetics - Abstract
ObjectivePatients with alcohol-associated hepatitis (AH) have a high mortality. Alcohol exacerbates liver damage by inducing gut dysbiosis, bacterial translocation and inflammation, which is characterised by increased numbers of circulating and hepatic neutrophils.DesignIn this study, we performed tandem mass tag (TMT) proteomics to analyse proteins in the faeces of controls (n=19), patients with alcohol-use disorder (AUD; n=20) and AH (n=80) from a multicentre cohort (InTeam). To identify protein groups that are disproportionately represented, we conducted over-representation analysis using Reactome pathway analysis and Gene Ontology to determine the proteins with the most significant impact. A faecal biomarker and its prognostic effect were validated by ELISA in faecal samples from patients with AH (n=70), who were recruited in a second and independent multicentre cohort (AlcHepNet).ResultFaecal proteomic profiles were overall significantly different between controls, patients with AUD and AH (principal component analysis p=0.001, dissimilarity index calculated by the method of Bray-Curtis). Proteins that showed notable differences across all three groups and displayed a progressive increase in accordance with the severity of alcohol-associated liver disease were predominantly those located in neutrophil granules. Over-representation and Reactome analyses confirmed that differentially regulated proteins are part of granules in neutrophils and the neutrophil degranulation pathway. Myeloperoxidase (MPO), the marker protein of neutrophil granules, correlates with disease severity and predicts 60-day mortality. Using an independent validation cohort, we confirmed that faecal MPO levels can predict short-term survival at 60 days.ConclusionsWe found an increased abundance of faecal proteins linked to neutrophil degranulation in patients with AH, which is predictive of short-term survival and could serve as a prognostic non-invasive marker.
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- 2025
6. Post-intervention control in HIV immunotherapy trials
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Sandel, Demi A, Rutishauser, Rachel L, and Peluso, Michael J
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Medical Microbiology ,Biomedical and Clinical Sciences ,Immunology ,Immunization ,Biotechnology ,Immunotherapy ,Infectious Diseases ,HIV/AIDS ,Sexually Transmitted Infections ,Clinical Trials and Supportive Activities ,Clinical Research ,Vaccine Related ,5.1 Pharmaceuticals ,5.2 Cellular and gene therapies ,Infection ,Good Health and Well Being ,Humans ,HIV Infections ,Clinical Trials as Topic ,HIV-1 ,HIV ,HIV cure ,immunotherapy ,post-intervention control ,Public Health and Health Services ,Virology ,Clinical sciences ,Medical microbiology ,Epidemiology - Abstract
Purpose of reviewWhile post-treatment control following interruption of standard-of-care antiretroviral therapy (ART) is well described, post-intervention control following immunotherapy in HIV cure-related clinical trials is less well understood. We provide an overview of recent studies that have identified post-intervention controllers and review the mechanisms that may drive this biologically important phenotype.Recent findingsPost-intervention controllers have been identified in recent immunotherapy trials testing broadly neutralizing antibodies, immune modulators, modified T cells, checkpoint inhibitors, and gene therapy administered individually or in combination. Currently, there is substantial variability in how each trial defines post-intervention control, as well as in how the mechanisms underlying such control are evaluated. Such mechanisms include ongoing activity of both exogenous and autologous antibodies, as well as changes in HIV-specific T cell function.SummaryWhile no therapeutic strategy to date has succeeded in definitively inducing HIV control, many studies have identified at least a small number of post-intervention controllers. The field would benefit from a standardized approach to defining and reporting this phenotype, as well as standardization in the approach to assessment of how it is achieved. Such efforts would allow for comparisons across clinical trials and could help accelerate efforts toward an HIV cure.
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- 2025
7. Quality of Life in People With HIV at the End of Life: Preliminary Results From the Last Gift Observational Cohort Study
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Coler, Brahm, Smith, Gordon Honerkamp, Arora, Anish K, Wells, Adam, Solso, Stephanie, Dullano, Cheryl, Concha-Garcia, Susanna, Hill, Eddie, Riggs, Patricia K, Korolkova, Anastasia, Deiss, Robert, Smith, Davey, Sundermann, Erin E, Gianella, Sara, Chaillon, Antoine, and Dubé, Karine
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Health Services and Systems ,Health Sciences ,Brain Disorders ,Sexually Transmitted Infections ,HIV/AIDS ,Behavioral and Social Science ,Depression ,Clinical Research ,Minority Health ,Mental Health ,Mental Illness ,Health Disparities ,Infectious Diseases ,7.1 Individual care needs ,Mental health ,Good Health and Well Being ,Humans ,Quality of Life ,Male ,Middle Aged ,Female ,HIV Infections ,Aged ,Cohort Studies ,California ,Terminal Care ,Anxiety ,Adult ,Clinical Sciences ,Public Health and Health Services ,Virology ,Clinical sciences ,Epidemiology ,Public health - Abstract
BackgroundAs people living with HIV (PWH) age, they face new challenges that can have a negative impact on their quality of life (QOL) and mental health.SettingThis study enrolled PWH at the end of life (EOL) who were actively engaged in cure-related research in Southern California, United States. EOL was defined as having a prognosis of 6 months or less to live. We examined the relationship between QOL, mental health, and research participation.MethodsStructured assessments were used to collect comprehensive data on QOL and mental health.ResultsFrom 2017 to 2023, 35 PWH in their final stages of life who were actively engaged in cure-related research were enrolled. Their median age was 62.7 years, and most were White or otherwise non-Hispanic/non-Latino (90.6%), and male (86.7%). Changes in QOL and the presence of neurologic and psychiatric conditions, with a focus on depression and anxiety, were the primary outcomes assessed in this study. Participants had stable QOL scores throughout the study. There was an inverse relationship between QOL and Beck Depression Inventory scores, with higher mean QOL scores being associated with lower mean Beck Depression Inventory scores ( P < 0.001).ConclusionsQOL remained stable among PWH who participate in cure-related research at EOL. The inverse relationship between QOL and depressive symptoms suggests that participation in cure-related research may improve QOL or reduce depressive symptoms in this population. Future interventions should look into ways to improve the well-being of PWH at EOL through research and customized mental health interventions.
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- 2025
8. An optimized fractionation method reveals insulin-induced membrane surface localization of GLUT1 to increase glycolysis in LβT2 cells
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Molinar-Inglis, Olivia, Wiggins, Kiara, Varma, Anjali, Del Mundo, Zena, Adame, Jose M, Cozzo, Alyssa, Muñoz, Oscar, Le, Uyen-Vy, Trinh, Davina, Garcia, Alexis C, Cisneros-Aguirre, Metztli, Gonzalez Ramirez, Monica L, Keyes, Jeremiah, Zhang, Jin, Lawson, Mark A, Trejo, JoAnn, and Nicholas, Dequina A
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Biochemistry and Cell Biology ,Biological Sciences ,Diabetes ,2.1 Biological and endogenous factors ,1.1 Normal biological development and functioning ,Metabolic and endocrine ,Animals ,Cell Membrane ,Insulin ,Mice ,Glucose Transporter Type 1 ,Proto-Oncogene Proteins c-akt ,Glycolysis ,Cell Line ,Cell Fractionation ,Protein Transport ,Signal Transduction ,Glucose ,Subcellular location ,Membrane ,Cytosol ,Endosomes ,Nuclear ,Phosphorylated akt ,Glucose transporter ,Gonadotrope ,Agricultural and Veterinary Sciences ,Medical and Health Sciences ,Endocrinology & Metabolism ,Biochemistry and cell biology ,Genetics ,Clinical sciences - Abstract
Insulin is an important regulator of whole-body glucose homeostasis. In insulin sensitive tissues such as muscle and adipose, insulin induces the translocation of glucose transporter 4 (GLUT4) to the cell membrane, thereby increasing glucose uptake. However, insulin also signals in tissues that are not generally associated with glucose homeostasis. In the human reproductive endocrine axis, hyperinsulinemia suppresses the secretion of gonadotropins from gonadotrope cells of the anterior pituitary, thereby linking insulin dysregulation to suboptimal reproductive health. In the mouse, gonadotropes express the insulin receptor which has the canonical signaling response of IRS, AKT, and mTOR activation. However, the functional outcomes of insulin action on gonadotropes are unclear. Here, we demonstrate through use of an optimized cell fractionation protocol that insulin stimulation of the LβT2 gonadotropic cell line results in the unexpected translocation of GLUT1 to the plasma membrane. Using our high purity fractionation protocol, we further demonstrate that though Akt signaling in response to insulin is intact, insulin-induced translocation of GLUT1 occurs independently of Akt activation in LβT2 cells.
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- 2025
9. Recollection and familiarity support auditory working memory in a manner analogous to visual working memory
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Hawkins, Chris, Venezia, Jon, Jenkins, Edward, Li, Sharon, and Yonelinas, Andrew
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Allied Health and Rehabilitation Science ,Biomedical and Clinical Sciences ,Clinical Sciences ,Health Sciences ,Neurosciences ,Clinical Research ,Health Disparities ,Behavioral and Social Science ,Information and Computing Sciences ,Psychology and Cognitive Sciences ,Language ,Communication and Culture ,Experimental Psychology - Abstract
Prior work has suggested that visual working memory as measured in change detection tasks can be based on recollection, whereby participants consciously identify a specific feature of a stimulus that has changed, or on familiarity, whereby participants sense that a change has occurred but are unable to consciously access what has changed. Whether recollection and familiarity also contribute to auditory working memory is unclear. The present study aims to address that gap in knowledge by having participants make confidence judgments in change detection tests for speech sounds and pure tones. The results indicated that both recollection and familiarity contribute to auditory working memory across a variety of conditions, and showed that these two processes are functionally dissociable. With speech sounds, subjects were better able to detect syllable changes compared to tone or location changes, and this benefit reflected a selective increase in recollection rather than familiarity. Moreover, for pure tones, both recollection and familiarity also contributed to performance, but recollection was found to be selectively eliminated under stimulus-limited test conditions (i.e., noise-masked, brief dichotic presentations). The results indicate that recollection and familiarity contribute to auditory working memory in a manner that is functionally similar to that observed in visual working memory.
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- 2025
10. Does surgeon-performed intraoperative wire localization allow for lower margin positivity rates compared to radiologist-performed preoperative localization in early breast cancer?
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Asmai, Reeta, Huy, Tess, Baker, Jennifer L, Yang, Hong-Ho, Thompson, Carlie K, and Kapoor, Nimmi S
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Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Minority Health ,Breast Cancer ,Cancer ,Women's Health ,Biomedical Imaging ,Clinical Research ,6.4 Surgery ,Humans ,Breast Neoplasms ,Female ,Margins of Excision ,Middle Aged ,Mastectomy ,Segmental ,Retrospective Studies ,Aged ,Adult ,Preoperative Care ,Ultrasonography ,Mammary ,Ultrasonography ,Interventional ,Fiducial Markers ,Intraoperative Care ,Carcinoma ,Intraductal ,Noninfiltrating ,Surgery ,Clinical sciences ,Dentistry - Abstract
BackgroundThis study compares positive margin rates in breast conserving surgery (BCS) for early breast cancer using two localization techniques: surgeon-performed intraoperative ultrasound-guided wire localization (IOWL) versus radiologist-performed preoperative wire localization (POWL).MethodsPatients with unifocal breast cancer undergoing BCS with follow-up at a single institution were retrospectively identified. Factors associated with positive margins were identified.Results177 patients underwent IOWL (N = 85) or POWL (N = 92). There was a significantly lower rate of positive margins for IOWL vs. POWL (7.1 % vs. 23.9 %, p = 0.002) and a corresponding lower rate of re-excision for IOWL vs. POWL (5.9 % vs. 18.5 %, p = 0.011). Presence of DCIS was associated with positive margins (p = 0.015). After adjusting for presence of DCIS, tumor size, and volume of tissue removed, the positive margin rate was significantly lower in the IOWL group compared to the POWL group (aOR 0.34, 95 % CI 0.13-0.93).ConclusionsIn this study, adjusted analysis favored IOWL in achieving negative tumor margins. Prospective studies are needed to further explore the impact of IOWL on quality, cost-effectiveness, and patient experience.
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- 2025
11. Radio-pathomic estimates of cellular growth kinetics predict survival in recurrent glioblastoma
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Oshima, Sonoko, Yao, Jingwen, Bobholz, Samuel, Nagaraj, Raksha, Raymond, Catalina, Teraishi, Ashley, Guenther, Anna-Marie, Kim, Asher, Sanvito, Francesco, Cho, Nicholas S, Eldred, Blaine SC, Connelly, Jennifer M, Nghiemphu, Phioanh L, Lai, Albert, Salamon, Noriko, Cloughesy, Timothy F, LaViolette, Peter S, and Ellingson, Benjamin M
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Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Brain Disorders ,Cancer ,Rare Diseases ,Humans ,Glioblastoma ,Brain Neoplasms ,Male ,Female ,Middle Aged ,Neoplasm Recurrence ,Local ,Magnetic Resonance Imaging ,Aged ,Adult ,Machine Learning ,Prognosis ,MRI ,rad-path ,radiopathomic mapping ,recurrent glioblastoma ,survival ,tumor growth rate ,Oncology and carcinogenesis - Abstract
Aim: A radio-pathomic machine learning (ML) model has been developed to estimate tumor cell density, cytoplasm density (Cyt) and extracellular fluid density (ECF) from multimodal MR images and autopsy pathology. In this multicenter study, we implemented this model to test its ability to predict survival in patients with recurrent glioblastoma (rGBM) treated with chemotherapy.Methods: Pre- and post-contrast T1-weighted, FLAIR and ADC images were used to generate radio-pathomic maps for 51 patients with longitudinal pre- and post-treatment scans. Univariate and multivariate Cox regression analyses were used to test the influence of contrast-enhancing tumor volume, total cellularity, mean Cyt and mean ECF at baseline, immediately post-treatment and the pre- and post-treatment rate of change in volume and cellularity on overall survival (OS).Results: Smaller Cyt and larger ECF after treatment were significant predictors of OS, independent of tumor volume and other clinical prognostic factors (HR = 3.23 × 10-6, p
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- 2024
12. Evaluation of outbreak persistence caused by multidrug-resistant and echinocandin-resistant Candida parapsilosis using multidimensional experimental and epidemiological approaches
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Daneshnia, Farnaz, Floyd, Daniel J, Ryan, Adam P, Ghahfarokhy, Pegah Mosharaf, Ebadati, Arefeh, Jusuf, Sebastian, Munoz, Julieta, Jeffries, Nathan Elias, Yvanovich, Emma Elizabeth, Apostolopoulou, Anna, Perry, Austin M, Lass-Flörl, Cornelia, Birinci, Asuman, Hilmioğlu-Polat, Süleyha, Ilkit, Macit, Butler, Geraldine, Nobile, Clarissa J, Arastehfar, Amir, and Mansour, Michael K
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Biological Sciences ,Biomedical and Clinical Sciences ,Microbiology ,Clinical Sciences ,Medical Microbiology ,Clinical Research ,Emerging Infectious Diseases ,Women's Health ,Infectious Diseases ,Antimicrobial Resistance ,Biodefense ,2.1 Biological and endogenous factors ,2.2 Factors relating to the physical environment ,Infection ,Good Health and Well Being ,Animals ,Mice ,Humans ,Candida parapsilosis ,Antifungal Agents ,Drug Resistance ,Fungal ,Echinocandins ,Disease Outbreaks ,Microbial Sensitivity Tests ,Multidrug resistance ,echinocandin resistance ,mannan ,chitin ,Beta-glucan ,Β-glucan ,Clinical sciences ,Epidemiology - Abstract
Candida parapsilosis is known to cause severe and persistent outbreaks in clinical settings. Patients infected with multidrug-resistant C. parapsilosis (MDR Cp) isolates were identified in a large Turkish hospital from 2017-2020. We subsequently identified three additional patients infected with MDR Cp isolates in 2022 from the same hospital and two echinocandin-resistant (ECR) isolates from a single patient in another hospital. The increasing number of MDR and ECR isolates contradicts the general principle that the severe fitness cost associated with these phenotypes could prevent their dominance in clinical settings. Here, we employed a multidimensional approach to systematically assess the fitness costs of MDR and ECR C. parapsilosis isolates. Whole-genome sequencing revealed a novel MDR genotype infecting two patients in 2022. Despite severe in vitro defects, the levels and tolerances of the biofilms of our ECR and MDR isolates were generally comparable to those of susceptible wild-type isolates. Surprisingly, the MDR and ECR isolates showed major alterations in their cell wall components, and some of the MDR isolates consistently displayed increased tolerance to the fungicidal activities of primary human neutrophils and were more immunoevasive during exposure to primary human macrophages. Our systemic infection mouse model showed that MDR and ECR C. parapsilosis isolates had comparable fungal burden in most organs relative to susceptible isolates. Overall, we observed a notable increase in the genotypic diversity and frequency of MDR isolates and identified MDR and ECR isolates potentially capable of causing persistent outbreaks in the future.
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- 2024
13. Volumetric hyperthermia delivery using the ExAblate Body MR-guided focused ultrasound system
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Kim, Kisoo, Gupta, Pragya, Narsinh, Kazim, Diederich, Chris J, and Ozhinsky, Eugene
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Biomedical and Clinical Sciences ,Clinical Sciences ,Bioengineering ,Clinical Research ,Biomedical Imaging ,Humans ,Hyperthermia ,Induced ,Magnetic Resonance Imaging ,High-Intensity Focused Ultrasound Ablation ,Phantoms ,Imaging ,ExAblate body array ,Hyperthermia ,MR-guided focused ultrasound ,drug delivery ,focused ultrasound ,volumetric heating ,Oncology & Carcinogenesis ,Clinical sciences - Abstract
ObjectivesTo investigate image-guided volumetric hyperthermia strategies using the ExAblate Body MR-guided focused ultrasound ablation system, involving mechanical transducer movement and sector-vortex beamforming.Materials and methodsAcoustic and thermal simulations were performed to investigate volumetric hyperthermia using mechanical transducer movement combined with sector-vortex beamforming, specifically for the ExAblate Body transducer. The system control in the ExAblate Body system was modified to achieve fast transducer movement and MR thermometry-based hyperthermia control, mechanical transducer movements and electronic sector-vortex beamforming were combined to optimize hyperthermia delivery. The experimental validation was performed using a tissue-mimicking phantom.ResultsThe developed simulation framework allowed for a parametric study with varying numbers of heating spots, sonication durations, and transducer movement times to evaluate the hyperthermia characteristics for mechanical transducer movement and sector-vortex beamforming. Hyperthermic patterns involving 2-4 sequential focal spots were analyzed. To demonstrate the feasibility of volumetric hyperthermia in the system, a tissue-mimicking phantom was sonicated with two distinct spots through mechanical transducer movement and sector-vortex beamforming. During hyperthermia, the average values of Tmax, T10, Tavg, T90, and Tmin over 200 s were measured within a circular ROI with a diameter of 10 pixels. These values were found to be 8.6, 7.9, 6.6, 5.2, and 4.5 °C, respectively, compared to the baseline temperature.ConclusionsThis study demonstrated the volumetric hyperthermia capabilities of the ExAblate Body system. The simulation framework developed in this study allowed for the evaluation of hyperthermia characteristics that could be implemented with the ExAblate MRgFUS system.
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- 2024
14. Participant experiences in a combination HIV cure-related trial with extended analytical treatment interruption in San Francisco, United States
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Dubé, Karine, Ndukwe, Samuel O, Korolkova, Ana, Dee, Lynda, Sugarman, Jeremy, and Sauceda, John A
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Biomedical and Clinical Sciences ,Clinical Sciences ,Clinical Trials and Supportive Activities ,Women's Health ,Sexually Transmitted Infections ,Infectious Diseases ,HIV/AIDS ,Clinical Research ,Infection ,Good Health and Well Being ,Humans ,Male ,United States ,Female ,Adult ,HIV Infections ,San Francisco ,Treatment Interruption ,Anxiety ,HIV-1 ,HIV cure research ,analytical treatment interruptions ,participant experiences ,socio-behavioral research ,combination trials ,people with HIV - Abstract
BackgroundThere is limited systematic information available about the perspectives of participants enrolled in intensive combination HIV cure-related trials inclusive of an extended analytical treatment interruption (ATI).ObjectiveTo assess and understand experiences of people with HIV involved in a combination HIV cure-related trial with an extended ATI.MethodsThe trial included five interventions and was followed by an ATI lasting up to 52 wk. From 2022 - 2023, we conducted in-depth interviews with study participants following their extended ATIs. Interviews were audio-recorded, transcribed, and analyzed via conventional thematic analysis.ResultsWe interviewed seven participants. The majority were male, White, and non-Hispanic, with a median age of 37 years. Trust in the research team, scientific altruism and hope of becoming a post-intervention controller were key motivators for joining the trial. Interviewees reported being satisfied with their decision to participate in the trial and the extended ATI. Most recounted feelings of worry related to viral rebound during the ATI. Participants reported both defeat and relief with ART restart. Four faced challenges with protecting partners from HIV during their ATI, such as trying to find out if their partner(s) were using pre-exposure prophylaxis.ConclusionsOur findings demonstrate potential improvements for future ATI trial participant experiences, such as more robust resources for psychosocial support and partner protections. Dedicating greater effort to understanding participant ATI experiences can inform the design of future participant-centered HIV cure trial protocols.
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- 2024
15. Prenatal exposure to social adversity and infant cortisol in the first year of life
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Keeton, Victoria F, Hoffmann, Thomas J, Goodwin, Kalisha Moneé, Powell, Bree, Tupuola, Sophia, and Weiss, Sandra J
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Reproductive Medicine ,Biomedical and Clinical Sciences ,Pediatric ,Behavioral and Social Science ,Mental Health ,Conditions Affecting the Embryonic and Fetal Periods ,Perinatal Period - Conditions Originating in Perinatal Period ,Mind and Body ,Violence Research ,Pediatric Research Initiative ,Clinical Research ,2.3 Psychological ,social and economic factors ,Aetiology ,Reproductive health and childbirth ,Good Health and Well Being ,Infant ,Infant ,Newborn ,Pregnancy ,Humans ,Female ,Child ,Hydrocortisone ,Longitudinal Studies ,Prenatal Exposure Delayed Effects ,Hypothalamo-Hypophyseal System ,Social Alienation ,Stress ,Psychological ,Pituitary-Adrenal System ,Saliva ,Social adversity ,infant cortisol ,prenatal stress ,fetal programming ,economic hardship ,biomarkers ,Clinical Sciences ,Neurology & Neurosurgery ,Clinical sciences ,Neurosciences - Abstract
Exposure to social adversity has been associated with cortisol dysregulation during pregnancy and in later childhood; less is known about how prenatal exposure to social stressors affects postnatal cortisol of infants. In a secondary analysis of data from a longitudinal study, we tested whether a pregnant woman's reports of social adversity during the third trimester were associated with their infant's resting cortisol at 1, 6, and 12 months postnatal. Our hypothesis was that prenatal exposure to social adversity would be associated with elevation of infants' cortisol. Measures included prenatal survey reports of social stressors and economic hardship, and resting cortisol levels determined from infant saliva samples acquired at each postnatal timepoint. Data were analyzed using linear mixed effects models. The final sample included 189 women and their infants (46.56% assigned female sex at birth). Prenatal economic hardship was significantly associated with infant cortisol at 6 months postnatal; reports of social stressors were not significantly associated with cortisol at any time point. Factors associated with hardship, such as psychological distress or nutritional deficiencies, may alter fetal HPA axis development, resulting in elevated infant cortisol levels. Developmental changes unique to 6 months of age may explain effects at this timepoint. More work is needed to better comprehend the complex pre- and post-natal physiologic and behavioral factors that affect infant HPA axis development and function, and the modifying role of environmental exposures.
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- 2024
16. Stimulation-based compassion mapping to assess risk of insular resection for surgical epilepsy management: illustrative case
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Hullett, Patrick W, Lin, Aria J, Greicius, Quinn, Knowlton, Robert C, Shih, Tina T, Rao, Vikram R, Sturm, Virginia E, and Chang, Edward F
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Biomedical and Clinical Sciences ,Clinical Sciences ,Epilepsy ,Neurodegenerative ,Brain Disorders ,Neurosciences ,compassion mapping ,empathy mapping ,epilepsy surgery ,insula ,insular epilepsy ,sadness - Abstract
BackgroundThe insula is a central node in network models of compassion and empathy. Because of this, resection of the insula for the treatment of drug-resistant epilepsy can change an individual's level of compassion.ObservationsHere, the authors present the clinical case of a woman with drug-resistant epilepsy localized to the nondominant insula. Because of the widespread literature implicating insular function in empathy and compassion, including lesion studies, her primary concern was changes in her compassion level after insular resection. In this case, the authors performed a novel compassion mapping paradigm before resection, using 30-second video clips to elicit compassion. This showed no changes in compassion with electrical stimulation of sites spanning the anterior insula, providing some reassurance that resection would not affect her compassion. Consistent with this, pre- and postresection testing, along with informal subjective reports by the patient, demonstrated no change in compassion or subcomponents of compassion (sadness and empathy) after right insular resection.LessonsWhile resection of the nondominant insular cortex warrants caution, this case illustrates a compassion mapping paradigm that reassured the clinical team and the patient that her compassion would not be affected and formal postoperative testing that was consistent with this. https://thejns.org/doi/10.3171/CASE24339.
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- 2024
17. HIV‐Associated Heart Failure: Phenotypes and Clinical Outcomes in a Safety‐Net Setting
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Durstenfeld, Matthew S, Thakkar, Anjali, Jeon, Diane, Short, Robert, Ma, Yifei, Tseng, Zian H, and Hsue, Priscilla Y
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Biomedical and Clinical Sciences ,Clinical Sciences ,Clinical Research ,Sexually Transmitted Infections ,Minority Health ,Infectious Diseases ,Heart Disease ,HIV/AIDS ,Women's Health ,Cardiovascular ,Good Health and Well Being ,Humans ,Female ,Male ,Heart Failure ,HIV Infections ,Middle Aged ,Phenotype ,Safety-net Providers ,Hospitalization ,Adult ,Cause of Death ,Risk Factors ,Aged ,United States ,Stroke Volume ,Retrospective Studies ,Electronic Health Records ,clinical outcomes ,heart failure ,HIV ,mortality ,Cardiorespiratory Medicine and Haematology ,Cardiovascular medicine and haematology - Abstract
BackgroundHIV is associated with increased risk of heart failure (HF) but data regarding phenotypes of HF and outcomes after HF diagnosis, especially within the safety net where half of people with HIV in the United States receive care, are less clear.Methods and resultsUsing an electronic health record cohort of all individuals with HF within a municipal safety-net system from 2001 to 2019 linked to the National Death Index Plus, we compared HF phenotypes, all-cause mortality, HF hospitalization, and cause of death for individuals with and without HIV. Among people with HF (n=14 829), 697 individuals had HIV (4.7%). People with HIV were diagnosed with HF 10 years younger on average. A higher proportion of people with HIV had a reduced ejection fraction at diagnosis (37.9% versus 32.7%). Adjusted for age, sex, and risk factors, coronary artery disease on angiography was similar by HIV status. HIV was associated with 55% higher risk of all-cause mortality (hazard ratio [HR], 1.55 [95% CI, 1.37-1.76]; P
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- 2024
18. Enrichment for clinical trials of early AD: Combining genetic risk factors and plasma p‐tau as screening instruments
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Wang, Xin, Wang, Xinran, Edland, Steven D, Broce, Iris J, Dale, Anders M, Banks, Sarah J, and Initiative, for the Alzheimer's Disease Neuroimaging
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Biomedical and Clinical Sciences ,Biological Psychology ,Clinical Sciences ,Neurosciences ,Psychology ,Aging ,Prevention ,Brain Disorders ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Clinical Research ,Behavioral and Social Science ,Dementia ,Acquired Cognitive Impairment ,Alzheimer's Disease ,Clinical Trials and Supportive Activities ,Neurodegenerative ,4.1 Discovery and preclinical testing of markers and technologies ,Neurological ,Good Health and Well Being ,Humans ,Alzheimer Disease ,tau Proteins ,Female ,Male ,Aged ,Cognitive Dysfunction ,Risk Factors ,Clinical Trials as Topic ,Biomarkers ,Disease Progression ,Phosphorylation ,Aged ,80 and over ,Alzheimer's disease ,clinical trial enrichment ,plasma p-tau181 ,polygenic hazard score ,Alzheimer's Disease Neuroimaging Initiative ,plasma p‐tau181 ,Geriatrics ,Clinical sciences ,Biological psychology - Abstract
IntroductionIdentifying low-cost, minimally-invasive screening instruments for Alzheimer's disease (AD) trial enrichment will improve the efficiency of AD trials.MethodsA total of 685 cognitively normal (CN) individuals and individuals with mild cognitive impairment (MCI) from the Alzheimer's Disease Neuroimaging Initiative (ADNI) were grouped according to cutoffs of genetic risk factor (G) polygenic hazard score (PHS) and tau pathology (T) plasma phosphorylated tau-181 (p-tau181) into four groups: G+T+, G-T-, G+T-, and G-T+. We assessed the associations between group level and longitudinal cognitive decline and AD conversion. Power analyses compared the estimated sample size required to detect differences in cognitive decline.ResultsThe G+T+ group was associated with faster cognitive decline and higher AD risk. Clinical trials enrolling G+T+ participants would benefit from significantly reduced sample sizes compared with similar trials using only single makers as an inclusion criterion.DiscussionThe combination of two low-cost, minimally-invasive measures-genetics and plasma biomarkers-would be a promising screening procedure for clinical trial enrollment.HighlightsParticipants with unimpaired or mildly impaired cognition were grouped based on cutoffs on genetic risk factors (G: polygenic hazardous score [PHS]) and Alzheimer's pathology (T: baseline plasma phosphorylated tau-181 [p-tau181]). Participants with high PHSs and plasma p-tau181 levels (G+T+) were at risk of faster cognitive decline and AD progression. The combination of PHS and plasma p-tau181 could enhance clinical trial enrichment more effectively than using single biomarkers.
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- 2024
19. A short version of the Everyday Cognition scale can predict clinical progression and cognitive decline
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Manjavong, Manchumad, Diaz, Adam, Ashford, Miriam T, Aaronson, Anna, Miller, Melanie J, Kang, Jae Myeong, Mackin, Scott, Tank, Rachana, Weiner, Michael, Nosheny, Rachel, and Initiative, for the Alzheimer's Disease Neuroimaging
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Biological Psychology ,Psychology ,Brain Disorders ,Alzheimer's Disease ,Clinical Research ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Behavioral and Social Science ,Prevention ,Dementia ,Neurosciences ,Acquired Cognitive Impairment ,Neurodegenerative ,Aging ,4.1 Discovery and preclinical testing of markers and technologies ,Neurological ,Humans ,Disease Progression ,Female ,Male ,Cognitive Dysfunction ,Aged ,Alzheimer Disease ,Neuropsychological Tests ,Aged ,80 and over ,Cognition ,Activities of Daily Living ,12-item Everyday Cognition ,Alzheimer's disease ,dementia ,Everyday Cognition scale ,mild cognitive impairment ,Alzheimer's Disease Neuroimaging Initiative ,12‐item Everyday Cognition ,Clinical Sciences ,Geriatrics ,Clinical sciences ,Biological psychology - Abstract
BackgroundThe Everyday Cognition scale (ECog-39) scores are associated with future cognitive decline. We investigated whether the 12-item ECog (ECog-12), which is being collected in Alzheimer's Disease Neuroimaging Initiative (ADNI)4, can predict progression.MethodsBaseline self (PT)- and study partner (SP)-ECog-12 data were extracted from the 39-item version collected in the ADNI. Weibull analysis examined the relationship between baseline ECog-12 and future clinical progression (change in Clinical Dementia Rating Sum of Boxes [CDR-SB] scores and diagnostic conversion).ResultsHigher PT- and SP-ECog-12 scores were associated with faster CDR-SB worsening, with hazard ratios in cognitively unimpaired (CU) 3.34 and 9.61, mild cognitive impairment (MCI) 1.44 and 2.82, and dementia 0.93 and 1.82. They were associated with conversion from CU to MCI 3.01 and 6.24 and MCI to dementia 1.61 and 3.07.DiscussionSP-ECog-12 provided a higher prognostic value for predicting clinical progression, so this can help identify and monitor patients at risk in research and health-care settings.HighlightsThe 12-item Everyday Cognition scale (ECog-12) data obtained from both raters increased diagnostic conversion risk from cognitively unimpaired to mild cognitive impairment (MCI) and from MCI to dementia. ECog-12, rated by study partners, was associated with an increased risk of Clinical Dementia Rating Sum of Boxes worsening in all diagnostic groups. Our results provide novel information about the specific scoring outputs and rater types (participant vs. study partner) of ECog-12 that can facilitate screening, prioritization, and longitudinal monitoring of the clinical progression of participants in Alzheimer's Disease Neuroimaging Initiative 4 and other Alzheimer's disease clinical studies, clinical trials, and in health-care settings.
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- 2024
20. Amiloride sensitizes prostate cancer cells to the reversible tyrosine kinase inhibitor lapatinib by modulating Erbb3 subcellular localization
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Jathal, Maitreyee K, Mudryj, Maria, Dall’Era, Marc A, and Ghosh, Paramita M
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Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Cancer ,Prostate Cancer ,Aging ,Urologic Diseases ,6.1 Pharmaceuticals ,5.1 Pharmaceuticals ,Lapatinib ,Humans ,Receptor ,ErbB-3 ,Male ,Prostatic Neoplasms ,Protein Kinase Inhibitors ,Cell Line ,Tumor ,Amiloride ,Receptor ,ErbB-2 ,Cell Nucleus ,Antineoplastic Agents ,Cell Proliferation ,Receptors ,Androgen ,Tyrosine Kinase Inhibitors ,Receptor ,erbB-2 ,Receptor ,erbB-3 ,Androgen receptor ,ErbB3 ,Heregulin-1β ,Prostate cancer ,Subcellular localization ,Biochemistry and Cell Biology ,Physiology ,Biochemistry & Molecular Biology ,Biochemistry and cell biology ,Medical biochemistry and metabolomics ,Oncology and carcinogenesis - Abstract
Neoadjuvant therapy (NAT) has been studied in clinically localized prostate cancer (PCa) to improve the outcomes from radical prostatectomy (RP) by 'debulking' of high-risk PCa; however, using androgen deprivation therapy (ADT) at this point risks castration resistant PCa (CRPC) clonal proliferation. Our goal is to identify alternative NAT that reduce hormone sensitive PCa (HSPC) without affecting androgen receptor (AR) transcriptional activity. PCa is associated with increased expression and activation of the epidermal growth factor receptor (EGFR) family, including HER2 and ErbB3. The FDA-approved HER2 inhibitor lapatinib has been tested in PCa but was ineffective due to continued activation of ErbB3. We now demonstrate that this is due to ErbB3 being localized to the nucleus in HSPC and thus protected from lapatinib which affect membrane localized HER2/ErbB3 dimers. Here, we show that the well-established, well-tolerated potassium-sparing diuretic amiloride hydrochloride dose dependently prevented ErbB3 nuclear localization via formation of plasma membrane localized HER2/ErbB3 dimers. This in turn allowed lapatinib inactivation of these dimers via inhibition of its target HER2, which dephosphorylated ERK1/2 and inhibited survival. Amiloride combined with lapatinib significantly increased apoptosis at relatively low doses of both drugs but did not affect AR transcriptional activity. Thus, our data indicate that a combination of amiloride and lapatinib could target HSPC tumors without problems associated with using ADT as NAT in HSPC.
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- 2024
21. Healthcare provider communication and current contraceptive use among transgender men and gender-diverse people: results from an online, cross-sectional survey in the United States
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Berry, Jasmine, Obedin-Maliver, Juno, Ragosta, Sachiko, Hastings, Jen, Lunn, Mitchell R, Flentje, Annesa, Capriotti, Matthew R, Dastur, Zubin, Lubensky, Micah E, Inman, Elizabeth M, and Moseson, Heidi
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Reproductive Medicine ,Biomedical and Clinical Sciences ,Clinical Sciences ,Clinical Research ,Prevention ,Contraception/Reproduction ,Behavioral and Social Science ,Sexual and Gender Minorities (SGM/LGBT*) ,Good Health and Well Being ,Paediatrics and Reproductive Medicine ,Public Health and Health Services ,Obstetrics & Reproductive Medicine ,Clinical sciences ,Reproductive medicine ,Health services and systems - Published
- 2024
22. The amyloid beta 42/38 ratio as a plasma biomarker of early memory deficits in cognitively unimpaired older adults
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Bamford, Alison R, Adams, Jenna N, Kim, Soyun, McMillan, Liv C, Malhas, Rond, Mapstone, Mark, Hitt, Brian D, Yassa, Michael A, and Thomas, Elizabeth A
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Biological Psychology ,Psychology ,Neurodegenerative ,Clinical Research ,Biomedical Imaging ,Brain Disorders ,Alzheimer's Disease ,Prevention ,Neurosciences ,Acquired Cognitive Impairment ,Dementia ,Aging ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,4.2 Evaluation of markers and technologies ,2.1 Biological and endogenous factors ,4.1 Discovery and preclinical testing of markers and technologies ,Neurological ,Humans ,Amyloid beta-Peptides ,Biomarkers ,Male ,Female ,Aged ,Memory Disorders ,Peptide Fragments ,Positron-Emission Tomography ,Aged ,80 and over ,Alzheimer Disease ,Cognition ,Brain ,Memory ,Learning ,Alzheimer's disease ,Amyloid-beta ,Neurodegeneration ,Plasma ,Biomarker ,Delayed recall ,Alzheimer’s disease ,Alzheimer&apos ,s disease ,amyloid-beta ,neurodegeneration ,plasma ,biomarker ,delayed recall ,Clinical Sciences ,Neurology & Neurosurgery ,Biological psychology - Abstract
The amyloid beta (Aβ) 42/40 ratio has been widely studied as a biomarker in Alzheimer's disease (AD); however, other Aβ peptides could also represent relevant biomarkers. We measured levels of Aβ38/40/42 in plasma samples from cognitively-unimpaired older adults and determined the relationships between Aβ levels and amyloid positron-emission-tomography (PET) and performance on a learning and memory task. We found that all Aβ peptides individually and the Aβ42/40 ratio, but not the Aβ42/38 ratio, were significantly correlated with brain amyloid (Aβ-PET). Multiple linear modeling, adjusting for age, sex, education, APOE4 and Aβ-PET showed significant associations between the Aβ42/38 ratio and memory. Further, associations between the Aβ42/38 ratio and learning scores were stronger in males and in Aβ-PET-negative individuals. In contrast, no significant associations were detected between the Aβ42/40 ratio and any learning measure. These studies implicate the Aβ42/38 ratio as a biomarker to assess early memory deficits and underscore the utility of the Aβ38 fragment as an important biomarker in the AD field.
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- 2024
23. Post-Operative Outcome Predictions in Vestibular Schwannoma Using Machine Learning Algorithms
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Dichter, Abigail, Bhatt, Khushi, Liu, Mohan, Park, Timothy, Djalilian, Hamid R, and Abouzari, Mehdi
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Biomedical and Clinical Sciences ,Clinical Sciences ,Networking and Information Technology R&D (NITRD) ,Patient Safety ,Bioengineering ,Machine Learning and Artificial Intelligence ,artificial neural network ,complication ,machine learning ,reoperation ,vestibular schwannoma ,Medical biochemistry and metabolomics ,Medical biotechnology ,Pharmacology and pharmaceutical sciences - Abstract
Background/Objectives: This study aimed to develop a machine learning (ML) algorithm that can predict unplanned reoperations and surgical/medical complications after vestibular schwannoma (VS) surgery. Methods: All pre- and peri-operative variables available in the American College of Surgeons National Surgical Quality Improvement Program (ACS-NSQIP) database (n = 110), except those directly related to our outcome variables, were used as input variables. A deep neural network model consisting of seven layers was developed using the Keras open-source library, with a 70:30 breakdown for training and testing. The feature importance of input variables was measured to elucidate their relative permutation effect in the ML model. Results: Of the 1783 patients with VS undergoing surgery, unplanned reoperation, surgical complications, and medical complications were seen in 8.5%, 5.2%, and 6.2% of patients, respectively. The deep neural network model had area under the curve of receiver operating characteristics (ROC-AUC) of 0.6315 (reoperation), 0.7939 (medical complications), and 0.719 (surgical complications). Accuracy, specificity, and negative predictive values of the model for all outcome variables ranged from 82.1 to 96.6%, while positive predictive values and sensitivity ranged from 16.7 to 51.5%. Variables such as the length of stay post-operation until discharge, days from operation to discharge, and the total hospital length of stay had the highest permutation importance. Conclusions: We developed an effective ML algorithm predicting unplanned reoperation and surgical/medical complications post-VS surgery. This may offer physicians guidance into potential post-surgical outcomes to allow for personalized medical care plans for VS patients.
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- 2024
24. Gaps in biomedical research in frontotemporal dementia: A call for diversity and disparities focused research
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Nuytemans, Karen, Franzen, Sanne, Broce, Iris J, Caramelli, Paulo, Ellajosyula, Ratnavalli, Finger, Elizabeth, Gupta, Veer, Gupta, Vivek, Illán‐Gala, Ignacio, Loi, Samantha M, Morhardt, Darby, Pijnenburg, Yolande, Rascovsky, Katya, Williams, Monique M, Yokoyama, Jennifer S, Acosta‐Uribe, Juliana, Akinyemi, Rufus, Alladi, Suvarna, Ayele, Biniyam A, Ayhan, Yavuz, Bourdage, Renelle, Castro‐Suarez, Sheila, de Souza, Leonardo Cruz, Dacks, Penny, de Boer, Sterre CM, de Leon, Jessica, Dodge, Shana, Grasso, Stephanie, Ghoshal, Nupur, Kamath, Vidyulata, Kumfor, Fiona, Matias‐Guiu, Jordi A, Narme, Pauline, Nielsen, T Rune, Okhuevbie, Daniel, Piña‐Escudero, Stefanie, Ruiz‐Garcia, Ramiro, Ryan, Brigid, Scarioni, Marta, Slachevsky, Andrea, Suarez‐Gonzalez, Aida, Tee, Boon Lead, Tsoy, Elena, Ulugut, Hulya, Onyike, Chiadi U, Babulal, Ganesh M, and PIA, ISTAART Diversity and Disparities PIA ISTAART Frontotemporal Dementia and Related Disorders
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Biomedical and Clinical Sciences ,Biological Psychology ,Clinical Sciences ,Neurosciences ,Psychology ,Frontotemporal Dementia (FTD) ,Dementia ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Neurodegenerative ,Brain Disorders ,Alzheimer's Disease Related Dementias (ADRD) ,Rare Diseases ,Acquired Cognitive Impairment ,Alzheimer's Disease ,Aphasia ,Aging ,Behavioral and Social Science ,Neurological ,Humans ,Frontotemporal Dementia ,Biomedical Research ,Healthcare Disparities ,Cultural Diversity ,biomarkers ,cultural diversity ,epidemiology ,ethnicity ,frontotemporal dementia ,genetics ,infrastructure ,ISTAART Frontotemporal Dementia and Related Disorders PIA ,ISTAART Diversity and Disparities PIA ,Geriatrics ,Clinical sciences ,Biological psychology - Abstract
Frontotemporal dementia (FTD) is one of the leading causes of young-onset dementia before age 65, typically manifesting as abnormal behavior (in behavioral variant FTD) or language impairment (in primary progressive aphasia). Although FTD affects all populations across the globe, knowledge regarding the pathophysiology and genetics derives primarily from studies conducted in North America and Western Europe. Globally, biomedical research for FTD is hindered by variable access to diagnosis, discussed in this group's earlier article, and by reduced access to expertise, funding, and infrastructure. This perspective paper was produced by two professional interest areas of the Alzheimer's Association International Society to Advance Alzheimer's Research and Treatment (ISTAART) and discusses the field's current status on the cross-cultural aspects of basic and translational research in FTD (including that focused on epidemiology, genetics, biomarkers, and treatment). It subsequently provides a summary of gaps and needs to address the disparities and advance global FTD biomedical research.
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- 2024
25. Cerebral perfusion and amyloidosis in the oldest‐old
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Dutt, Shubir, Woodworth, Davis C, Sajjadi, S Ahmad, Greenia, Dana E, DeCarli, Charles, Kawas, Claudia H, Corrada, María M, and Nation, Daniel A
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Biological Psychology ,Psychology ,Biomedical Imaging ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Dementia ,Neurodegenerative ,Brain Disorders ,Acquired Cognitive Impairment ,Alzheimer's Disease ,Neurosciences ,Aging ,Behavioral and Social Science ,Clinical Research ,4.2 Evaluation of markers and technologies ,2.1 Biological and endogenous factors ,Neurological ,Humans ,Female ,Male ,Aged ,80 and over ,Positron-Emission Tomography ,Case-Control Studies ,Magnetic Resonance Imaging ,Amyloidosis ,Cognitive Dysfunction ,Cerebrovascular Circulation ,Brain ,Ethylene Glycols ,aging ,amyloid PET ,arterial spin labeling ,cerebral perfusion ,cerebrovascular function ,oldest-old ,oldest‐old ,Clinical Sciences ,Geriatrics ,Clinical sciences ,Biological psychology - Abstract
IntroductionIn a nested case-control study, we examined how cerebral perfusion relates to cognitive status and amyloid in the oldest-old (i.e., 90 years of age and older).MethodsStudy participants included 113 dementia-free older adults (76 cognitively normal [CN]; 37 cognitively impaired, no dementia [CIND]) from the 90+ Study (mean age = 92.9, SD = 2.4). We quantified regional perfusion from arterial spin labeling-MRI (magnetic resonance imaging) and amyloid deposition from florbetapir-positron emission tomography (PET) in a region comprising the posterior cingulate and precuneus (PCC+PCu), and additionally quantified perfusion in other regions important for cognitive decline (medial temporal lobe, inferior parietal lobe, and orbitofrontal cortex).ResultsParticipants with CIND displayed lower perfusion in the PCC+PCu relative to participants who were CN, but there was no statistically significant difference between the groups in amyloid burden in this region. In addition, participants with CIND exhibited lower inferior parietal and higher orbitofrontal perfusion.DiscussionCerebral perfusion is related to cognitive status in the oldest-old independent of amyloidosis.HighlightsCerebral perfusion and amyloid positron emission tomography (PET) were measured in older adults: 90 years of age and older. Perfusion but not amyloid differed between cognitively impaired and normal groups. Frontal and parietal regions linked to cognitive decline had altered perfusion. Perfusion is related to cognitive status in the oldest-old independent of amyloid.
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- 2024
26. Arterial spin labeling perfusion MRI in the Alzheimer's Disease Neuroimaging Initiative: Past, present, and future
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Thropp, Pamela, Phillips, Eliana, Jung, Youngkyoo, Thomas, David L, Tosun, Duygu, and Initiative, for the Alzheimer's Disease Neuroimaging
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Biomedical and Clinical Sciences ,Biological Psychology ,Clinical Sciences ,Neurosciences ,Psychology ,Biomedical Imaging ,Dementia ,Acquired Cognitive Impairment ,Alzheimer's Disease ,Brain Disorders ,Aging ,Neurodegenerative ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Cerebrovascular ,4.1 Discovery and preclinical testing of markers and technologies ,Neurological ,Humans ,Alzheimer Disease ,Brain ,Cerebrovascular Circulation ,Magnetic Resonance Imaging ,Neuroimaging ,Spin Labels ,Alzheimer's disease ,arterial spin labeling ,arterial transit time ,cerebral blood flow ,magnetic resonance imaging ,multiple post-label delay ,Alzheimer's Disease Neuroimaging Initiative ,multiple post‐label delay ,Geriatrics ,Clinical sciences ,Biological psychology - Abstract
On the 20th anniversary of the Alzheimer's Disease Neuroimaging Initiative (ADNI), this paper provides a comprehensive overview of the role of arterial spin labeling (ASL) magnetic resonance imaging (MRI) in understanding perfusion changes in the aging brain and the relationship with Alzheimer's disease (AD) pathophysiology and its comorbid conditions. We summarize previously used acquisition protocols, available data, and the motivation for adopting a multi-post-labeling delay (PLD) acquisition scheme in the latest ADNI MRI protocol (ADNI 4). We also detail the process of setting up this scheme on different scanners, emphasizing the potential of ASL imaging in future AD research. HIGHLIGHTS: The Alzheimer's Disease Neuroimaging Initiative (ADNI) adopted multimodal arterial spin labeling magnetic resonance imaging (ASL MRI) to meet evolving biomarker requirements. The ADNI provides one of the largest multisite, multi-vendor ASL data collections. The ADNI 4 incorporates multi-post-labeling delay ASL techniques to jointly quantify cerebral blood flow and arterial transit time. ADNI 4 ASL MRI protocol is apt for detecting early Alzheimer's disease with cerebrovascular pathology.
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- 2024
27. Evaluating the updated LATE‐NC staging criteria using data from NACC
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Woodworth, Davis C, Nguyen, Katelynn M, Sordo, Lorena, Scambray, Kiana A, Head, Elizabeth, Kawas, Claudia H, Corrada, María M, Nelson, Peter T, and Sajjadi, S Ahmad
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Biological Psychology ,Psychology ,Dementia ,Neurodegenerative ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Acquired Cognitive Impairment ,Brain Disorders ,Alzheimer's Disease ,Aging ,Neurosciences ,2.1 Biological and endogenous factors ,Neurological ,Humans ,Female ,Male ,Aged ,Alzheimer Disease ,Aged ,80 and over ,Hippocampus ,Lewy Bodies ,DNA-Binding Proteins ,Atrophy ,TDP-43 Proteinopathies ,Disease Progression ,Alzheimer's disease ,amygdala ,dementia ,hippocampal sclerosis of aging ,hippocampus ,limbic predominant age-related TAR DNA-binding protein of 43 kDa encephalopathy neuropathologic change ,National Alzheimer's Coordinating Center ,neuropathology ,limbic predominant age‐related TAR DNA‐binding protein of 43 kDa encephalopathy neuropathologic change ,Clinical Sciences ,Geriatrics ,Clinical sciences ,Biological psychology - Abstract
IntroductionLimbic-predominant age-related TAR DNA-binding protein of 43 kDa encephalopathy neuropathologic change (LATE-NC) staging criteria were updated in 2023. We evaluated this updated staging using National Alzheimer's Coordinating Center data.MethodsWe examined associations of LATE-NC stages with cognition and other neuropathologic changes (NCs), and with cognition while accounting for other NCs, using multilevel regression models.ResultsOf 1352 participants, 502 (37%) had LATE-NC (23% stage 1a, 6% stage 1b, 58% stage 2, 13% stage 3). LATE-NC stages were associated with cognition, hippocampal sclerosis of aging (HS-A), Alzheimer's disease NC (ADNC), Lewy bodies (LBs), and hippocampal atrophy. While stage 1b was associated with cognition and HS-A consistent with other stages, it was not associated with ADNC or LBs. All LATE-NC stages remained significantly associated with worse cognition when accounting for other NCs.DiscussionThe updated LATE-NC staging criteria capture variations in early TDP-43 pathology spread which are consequential for cognition and associations with other NCs.HighlightsWe applied the updated limbic-predominant age-related TAR DNA-binding protein of 43 kDa encephalopathy neuropathologic change (LATE-NC) staging criteria to data from the National Alzheimer's Coordinating Center. LATE-NC stage 1b was identified in 22% of participants with stage 1. In contrast to other LATE-NC stages, stage 1b was not associated with Alzheimer's disease neuropathologic change (ADNC) or Lewy bodies. Stages 1a and 1b were significantly associated with dementia and memory impairment. Stages 1b+ were more strongly tied to dementia than all other neuropathologic changes except high likelihood ADNC.
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- 2024
28. Impact of a multicomponent strategy including decentralized molecular testing for tuberculosis on mortality: planned analysis of a cluster-randomized trial in Uganda
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Katamba, Achilles, Mochizuki, Tessa, Nalugwa, Talemwa, Nantale, Mariam, Oyuku, Denis, Nabwire, Sarah, Babirye, Diana, Musinguzi, Johnson, Nakawesa, Annet, Nekesa, Irene, Turyahabwe, Stavia, Joloba, Moses, Dowdy, David W, Moore, David AJ, Davis, J Lucian, Shete, Priya, Adams, Katherine, Reza, Tania, Fielding, Katherine, and Cattamanchi, Adithya
- Subjects
Biomedical and Clinical Sciences ,Clinical Sciences ,Health Sciences ,Sexually Transmitted Infections ,Comparative Effectiveness Research ,Rare Diseases ,Clinical Trials and Supportive Activities ,HIV/AIDS ,Infectious Diseases ,Tuberculosis ,Clinical Research ,Emerging Infectious Diseases ,Infection ,Good Health and Well Being ,Xpert ,Diagnostic trials ,tuberculosis ,diagnostic trials ,Clinical sciences ,Health services and systems ,Public health - Abstract
BackgroundRapid diagnosis of tuberculosis (TB) is important for improving outcomes and reducing transmission. Previous studies assessing the impact of Xpert MTB/RIF (Xpert), a molecular assay that provides results within 2 h, on mortality have been inconclusive. In this planned analysis of a pragmatic cluster-randomized trial in Uganda, we assessed whether a multicomponent strategy, including decentralized Xpert testing, decreased mortality among adults evaluated for TB.MethodsTen community health centers were randomized, using a computer-generated randomization sequence, to the XPEL-TB intervention (on-site Xpert testing plus implementation supports) and ten to routine TB care without any modifications (on-site smear microscopy and referral-based Xpert testing for selected patients). The trial included all adults ( ≥ 18 years of age) undergoing evaluation for presumptive TB at each trial health center. All-cause mortality was a secondary outcome of the trial. For this analysis, the primary outcome was the mortality rate (censored at 18 months), and the secondary outcome was the six-month mortality risk. We compared the outcomes between trial arms using cluster-level analyses to account for stratified randomization and patient-level covariates. The trial was registered with the US National Institutes of Health (identifier: NCT03044158) and the Pan African Clinical Trials Registry (identifier: PACTR201610001763265).FindingsVital status was ascertained for 8413 of 9563 (88%) XPEL-TB trial participants who presented at the health centers from October 22, 2018 through February 29, 2020. The adjusted rate ratio (aRR) was 0.77 (95% CI: 0.47-1.28), comparing the intervention (145 deaths/3655 person-years) to routine care (154 deaths/3015 person-years). In sub-group analyses, point estimates for mortality were lower in the intervention arm among people without HIV (aRR = 0.50, 95% CI: 0.26-0.96) and among females (aRR = 0.64, 95% CI: 0.33-1.23). The mortality risk analysis yielded similar results.InterpretationConsistent point estimates favoring the intervention in our trial and previous ones suggest that Xpert testing may have an impact on mortality at community health centers. However, the magnitude of effect is small, and statistically significant results are unlikely to be attained within a single trial. Future trials of novel TB diagnostics at community health centers should focus on more proximal outcomes including TB detection and treatment initiation.FundingThis work was supported by the National Heart, Lung, and Blood Institute of the US National Institutes of Health under award number R01HL130192.
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- 2024
29. Cerebrovascular markers of WMH and infarcts in ADNI: A historical perspective and future directions
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Maillard, Pauline, Fletcher, Evan, Carmichael, Owen, Schwarz, Christopher, Seiler, Stephan, DeCarli, Charles, and Initiative, for the Alzheimer's Disease Neuroimaging
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Biomedical and Clinical Sciences ,Biological Psychology ,Clinical Sciences ,Neurosciences ,Psychology ,Alzheimer's Disease Related Dementias (ADRD) ,Aging ,Prevention ,Brain Disorders ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Vascular Cognitive Impairment/Dementia ,Cerebrovascular ,Behavioral and Social Science ,Dementia ,Acquired Cognitive Impairment ,Alzheimer's Disease ,Neurodegenerative ,Biomedical Imaging ,2.1 Biological and endogenous factors ,4.1 Discovery and preclinical testing of markers and technologies ,4.2 Evaluation of markers and technologies ,Neurological ,Aged ,Female ,Humans ,Alzheimer Disease ,Biomarkers ,Brain ,Cerebrovascular Disorders ,Cognitive Dysfunction ,Magnetic Resonance Imaging ,Neuroimaging ,White Matter ,Male ,Alzheimer's disease ,Alzheimer's Disease Neuroimaging Initiative ,cerebrovascular disease ,magnetic resonance infarcts ,white matter hyperintensities ,Geriatrics ,Clinical sciences ,Biological psychology - Abstract
White matter hyperintensities (WMH) and infarcts found on magnetic resonance imaging (MR infarcts) are common biomarkers of cerebrovascular disease. In this review, we summarize the methods, publications, and conclusions stemming from the Alzheimer's Disease Neuroimaging Initiative (ADNI) related to these measures. We combine analysis of WMH and MR infarct data from across the three main ADNI cohorts with a review of existing literature discussing new methodologies and scientific findings derived from these data. Although ADNI inclusion criteria were designed to minimize vascular risk factors and disease, data across all the ADNI cohorts found consistent trends of increasing WMH volumes associated with advancing age, female sex, and cognitive impairment. ADNI, initially proposed as a study to investigate biomarkers of AD pathology, has also helped elucidate the impact of asymptomatic cerebrovascular brain injury on cognition within a cohort relatively free of vascular disease. Future ADNI work will emphasize additional vascular biomarkers. HIGHLIGHTS: White matter hyperintensities (WMHs) are common to advancing age and likely reflect brain vascular injury among older individuals. WMH and to a lesser extent, magnetic resonance (MR) infarcts, affect risk for transition to cognitive impairment. WMHs and MR infarcts are present, even among Alzheimer's Disease Neuroimaging Initiative (ADNI) participants highly selected to have Alzheimer's disease (AD) as the primary pathology. WMH burden in ADNI is greater among individuals with cognitive impairment and has been associated with AD neurodegenerative markers and cerebral amyloidosis. The negative additive effects of cerebrovascular disease appear present, even in select populations, and future biomarker work needs to further explore this relationship.
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- 2024
30. Investigating the Association between Steatotic Liver Disease and CKD in a Nationally Representative Sample
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Lai, Mason, Lai, Jennifer C, Allegretti, Andrew S, Patidar, Kavish R, and Cullaro, Giuseppe
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Epidemiology ,Biomedical and Clinical Sciences ,Clinical Sciences ,Health Sciences ,Minority Health ,Liver Disease ,Chronic Liver Disease and Cirrhosis ,Digestive Diseases ,Oral and gastrointestinal ,Good Health and Well Being ,CKD ,chronic renal disease ,chronic renal insufficiency ,clinical epidemiology ,hepatitis ,liver failure ,Clinical sciences - Abstract
KEY POINTS: CKD is more common among those with steatotic liver disease compared with those without liver disease in the United States. Higher degrees of liver fibrosis are associated with greater prevalence of CKD independent of other common risk factors of kidney disease. BACKGROUND: Steatotic liver disease (SLD) and CKD are common conditions that are strongly associated. Yet, there is a paucity of data regarding the prevalence of this overlap and the factors that may drive its occurrence. METHODS: Using the National Health and Nutrition Examination Survey, we examined trends among adult participants from 2005 to 2020 that defined SLD using the Fatty Liver Index. We completed correlative analyses among adult participants from 2017 to 2020 that defined SLD on the basis of FibroScan results. We used multivariable survey-weighted binomial generalized linear models to determine the factors that were associated with CKD, defined as eGFR 30. RESULTS: Among the 76,496 participants included in trend analyses, the estimated prevalence of CKD was 15.7% (95% confidence interval [CI], 15.2% to 16.2%) and SLD was 42.3% (95% CI, 41.4% to 43.2%). As compared with those without SLD, those with SLD had a significantly higher estimated prevalence of CKD (SLD, 15.7%; 95% CI, 14.9% to 16.5%; versus no SLD, 11.2%; 95% CI, 10.7% to 11.7%). In multivariate analyses of 3667 participants who underwent FibroScan and had SLD defined using the Fatty Liver Index, adjusting for control and presence of diabetes mellitus, hypertension, and hyperlipidemia/dyslipidemia, compared with those with normal liver stiffness, those with moderate scarring (F2) had similar odds of CKD (1.53; 95% CI, 0.91 to 2.56), those with severe scarring (F3) had higher odds of CKD (2.28; 95% CI, 1.20 to 4.32), and those with cirrhosis had higher odds of CKD (2.21; 95% CI, 1.13 to 4.32). CONCLUSIONS: Our findings highlight that CKD is common among patients with SLD and that higher degrees of hepatic fibrosis are associated with CKD independent of other comorbidities of the metabolic syndrome.
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- 2024
31. Individual and community socioeconomic status and receipt of influenza vaccines among adult primary care patients in a large academic health system: 2017–2019
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Takada, Sae, Chung, Un Young, Bourgois, Philippe, Duru, O Kenrik, Gelberg, Lillian, Han, Maria, Pfeffer, Michael A, Shoptaw, Steve, Wells, Kenneth, and Javanbakht, Marjan
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Biomedical and Clinical Sciences ,Public Health ,Health Sciences ,Clinical Sciences ,Prevention ,Immunization ,Behavioral and Social Science ,Pneumonia & Influenza ,Infectious Diseases ,Health Services ,Social Determinants of Health ,Emerging Infectious Diseases ,Health Disparities ,Influenza ,Minority Health ,Clinical Research ,Vaccine Related ,3.4 Vaccines ,Infection ,Good Health and Well Being ,Influenza vaccine ,Racial disparity ,Social vulnerability index ,Socioeconomic status - Abstract
IntroductionInfluenza causes significant mortality and morbidity in the U.S., yet less than half of adults receive influenza vaccination. We use census-tract level social vulnerability index (SVI) to examine community- and individual-level characteristics of influenza vaccine coverage among primary care patients at an academic health system in Los Angeles, CA.MethodsWe used electronic medical records (EMR) data of 247,773 primary care patients for 2017-18 and 2018-19 influenza seasons. We geocoded patients' addresses to identify their SVI and merged them with EMR data. We specified mixed-effects logistic regression models estimating the association between patient's vaccine receipt and SVI, adjusting for sociodemographics, Charlson Comorbidity Index, and health insurance.ResultsVaccination coverage was higher during the 2018-19 influenza season (34%) compared to the 2017-18 season (23%). In adjusted analyses, higher SVI, lower individual socioeconomic status and racial and ethnic minority status were independently associated with lower odds of vaccination. Patients on Medicaid had lower odds of vaccine receipt (adjusted Odds Ratio [aOR] = 0.77 for
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- 2024
32. Identification of novel genomic loci for anxiety symptoms and extensive genetic overlap with psychiatric disorders
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Tesfaye, Markos, Jaholkowski, Piotr, Shadrin, Alexey A, van der Meer, Dennis, Hindley, Guy FL, Holen, Børge, Parker, Nadine, Parekh, Pravesh, Birkenæs, Viktoria, Rahman, Zillur, Bahrami, Shahram, Kutrolli, Gleda, Frei, Oleksandr, Djurovic, Srdjan, Dale, Anders M, Smeland, Olav B, O'Connell, Kevin S, and Andreassen, Ole A
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Biological Psychology ,Biomedical and Clinical Sciences ,Psychology ,Behavioral and Social Science ,Pediatric ,Mental Illness ,Human Genome ,Genetics ,Schizophrenia ,Biotechnology ,Serious Mental Illness ,Mental Health ,Brain Disorders ,2.1 Biological and endogenous factors ,Mental health ,Good Health and Well Being ,Humans ,Genome-Wide Association Study ,Bipolar Disorder ,Autism Spectrum Disorder ,Depressive Disorder ,Major ,Attention Deficit Disorder with Hyperactivity ,Female ,Anxiety Disorders ,Male ,Multifactorial Inheritance ,Adult ,Genetic Loci ,Anxiety ,Comorbidity ,Middle Aged ,Mental Disorders ,anxiety ,genetic loci ,genetic overlap ,psychiatric disorder ,Clinical Sciences ,Neurosciences ,Cognitive Sciences ,Clinical sciences ,Biological psychology - Abstract
AimsAnxiety disorders are prevalent and anxiety symptoms (ANX) co-occur with many psychiatric disorders. We aimed to identify genomic loci associated with ANX, characterize its genetic architecture, and genetic overlap with psychiatric disorders.MethodsWe included a genome-wide association study of ANX (meta-analysis of UK Biobank and Million Veterans Program, n = 301,732), schizophrenia (SCZ), bipolar disorder (BIP), major depression (MD), attention-deficit/hyperactivity disorder (ADHD), and autism spectrum disorder (ASD), and validated the findings in the Norwegian Mother, Father, and Child Cohort (n = 95,841). We employed the bivariate causal mixture model and local analysis of covariant association to characterize the genetic architecture including overlap between the phenotypes. Conditional and conjunctional false discovery rate analyses were performed to boost the identification of loci associated with anxiety and shared with psychiatric disorders.ResultsAnxiety was polygenic with 12.9k genetic variants and overlapped extensively with psychiatric disorders (4.1k-11.4k variants) with predominantly positive genetic correlations between anxiety and psychiatric disorders. We identified 119 novel loci for anxiety by conditioning on the psychiatric disorders, and loci shared between anxiety and MD n=47 , BIP n=33 , SCZ n=71 , ADHD n=20 , and ASD n=5 . Genes annotated to anxiety loci exhibit enrichment for a broader range of biological pathways including cell adhesion and neurofibrillary tangle compared with genes annotated to the shared loci.ConclusionsAnxiety is highly polygenic phenotype with extensive genetic overlap with psychiatric disorders, and we identified novel loci for anxiety implicating new molecular pathways. The shared genetic architecture may underlie the extensive cross-disorder comorbidity of anxiety, and the identified molecular underpinnings may lead to potential drug targets.
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- 2024
33. Molecular Hallmarks of Prostate-specific Membrane Antigen in Treatment-naïve Prostate Cancer
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Weiner, Adam B, Agrawal, Raag, Wang, Nicholas K, Sonni, Ida, Li, Eric V, Arbet, Jaron, Zhang, JJH, Proudfoot, James A, Hong, Boon Hao, Davicioni, Elai, Kane, Nathanael, Valle, Luca F, Kishan, Amar U, Dal Pra, Alan, Ghadjar, Pirus, Sweeney, Christopher J, Nickols, Nicholas G, Karnes, R Jeffrey, Shen, John, Rettig, Matthew B, Czernin, Johannes, Ross, Ashely E, Chua, Melvin Lee Kiang, Schaeffer, Edward M, Calais, Jeremie, Boutros, Paul C, and Reiter, Robert E
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Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Cancer ,Genetics ,Aging ,Health Disparities ,Biomedical Imaging ,Minority Health ,Prostate Cancer ,Urologic Diseases ,Radiation Oncology ,Male ,Humans ,Prostatic Neoplasms ,Glutamate Carboxypeptidase II ,Antigens ,Surface ,Aged ,Positron-Emission Tomography ,Biomarkers ,Tumor ,Middle Aged ,Prostatic neoplasms/genetics ,Prostatic neoplasms/pathology ,Gene expression ,Biomarkers ,Tumor ,Prognosis ,Gene expression profiling ,Urology & Nephrology ,Clinical sciences - Abstract
Background and objectiveWe characterized tumor prostate-specific membrane antigen (PSMA) levels as a reflection of cancer biology and treatment sensitivities for treatment-naïve prostate cancer.MethodsWe first correlated PSMA positron emission tomography (PET) maximum standardized uptake values (SUVmax) in primary prostate cancer with tumor FOLH1 (PSMA RNA abundance) to establish RNA as a proxy (n = 55). We then discovered and validated molecular pathways associated with PSMA RNA levels in two large primary tumor cohorts. We validated those associations in independent cohorts (18 total; 5684 tumor samples) to characterize the pathways and treatment responses associated with PSMA.Key findings and limitationsPSMA RNA abundance correlates moderately with SUVmax (ρ = 0.41). In independent cohorts, androgen receptor signaling is more active in tumors with high PSMA. Accordingly, patients with high PSMA tumors experienced longer cancer-specific survival when managed with androgen deprivation therapy for biochemical recurrence (adjusted hazard ratio [AHR] 0.54 [0.34-0.87]; n = 174). PSMA low tumors possess molecular markers of resistance to radiotherapy. Consistent with this, patients with high PSMA tumors experience longer time to recurrence following primary radiotherapy (AHR 0.50 [0.28-0.90]; n = 248). In the SAKK09/10 trial (n = 224), patients with high PSMA tumors who were managed with salvage radiotherapy experienced longer time to progression in the 64-Gy arm (restricted mean survival time [RMST] +7.60 [0.05-15.16]), but this effect was mitigated in the 70-Gy arm (RMST 3.52 [-3.30 to 10.33]). Limitations include using PSMA RNA as a surrogate for PET SUVmax.Conclusions and clinical implicationsPSMA levels in treatment-naïve prostate cancer differentiate tumor biology and treatment susceptibilities. These results warrant validation using PET metrics to substantiate management decisions based on imaging.
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- 2024
34. Association of CSF α‐synuclein seed amplification assay positivity with disease progression and cognitive decline: A longitudinal Alzheimer's Disease Neuroimaging Initiative study
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Tosun, Duygu, Hausle, Zachary, Thropp, Pamela, Concha‐Marambio, Luis, Lamoureux, Jennifer, Lebovitz, Russ, Shaw, Leslie M, Singleton, Andrew B, Weiner, Michael W, Initiative, the Alzheimer's Disease Neuroimaging, and Blauwendraat, Cornelis
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Biomedical and Clinical Sciences ,Biological Psychology ,Clinical Sciences ,Neurosciences ,Psychology ,Dementia ,Acquired Cognitive Impairment ,Alzheimer's Disease ,Aging ,Neurodegenerative ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Brain Disorders ,4.1 Discovery and preclinical testing of markers and technologies ,2.1 Biological and endogenous factors ,Neurological ,Humans ,Male ,Female ,Aged ,Disease Progression ,Alzheimer Disease ,Longitudinal Studies ,Amyloid beta-Peptides ,tau Proteins ,alpha-Synuclein ,Biomarkers ,Cross-Sectional Studies ,Cognitive Dysfunction ,Neuroimaging ,Peptide Fragments ,Aged ,80 and over ,Middle Aged ,Alzheimer's disease ,cognitive decline ,co-pathology ,Lewy body ,seed amplification assay ,Alzheimer's Disease Neuroimaging Initiative ,co‐pathology ,Geriatrics ,Clinical sciences ,Biological psychology - Abstract
IntroductionCerebrospinal fluid (CSF) α-synuclein (α-syn) seed amplification assay (SAA) is a sensitive and specific tool for detecting Lewy body co-pathology in Alzheimer's disease.MethodsA total of 1637 cross-sectional and 407 longitudinal CSF samples from the Alzheimer's Disease Neuroimaging Initiative (ADNI) were tested with SAA. We examined longitudinal dynamics of amyloid beta (Aβ), α-syn seeds, and phosphorylated tau181 (p-tau181), along with global and domain-specific cognition in stable SAA+, stable SAA-, and those who converted to SAA+ from SAA-.ResultsSAA+ individuals had faster cognitive decline than SAA-, notably in mild cognitive impairment, and presented with earlier symptom onset. SAA+ conversion was associated with CSF Aβ42 positivity but did not impact the progression of either CSF Aβ42 or CSF p-tau181 status. CSF Aβ42, p-tau181, and α-syn SAA were all strong predictors of clinical progression, particularly CSF Aβ42. In vitro, CSF α-syn SAA kinetic parameters were associated with participant demographics, clinical profiles, and cognitive decline.DiscussionThese results highlight the interplay between amyloid and α-syn and their association with disease progression.HighlightsSeed amplification assay (SAA) positivity was associated with greater cognitive decline and earlier symptom onset. Thirty-four Alzheimer's Disease Neuroimaging Initiative (ADNI) individuals progressed from SAA- to SAA+, that is, ≈ 5% conversion. SAA conversion was associated with amyloid beta (Aβ) pathology and greater cognitive decline. SAA status did not impact the progression of either CSF Aβ42 or phosphorylated tau181 biomarkers. Change in clinical diagnosis was associated with both Alzheimer's disease biomarkers and SAA. SAA kinetic parameters were associated with clinical features and progression.
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- 2024
35. Co-morbid cannabis use disorder and chronotype are associated with mood symptom onset in people with bipolar disorder
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Miranda, Alannah, Holloway, Breanna M, Perry, William, Minassian, Arpi, and McCarthy, Michael
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Biological Psychology ,Pharmacology and Pharmaceutical Sciences ,Biomedical and Clinical Sciences ,Psychology ,Mental Illness ,Cannabinoid Research ,Clinical Research ,Sleep Research ,Behavioral and Social Science ,Brain Disorders ,Serious Mental Illness ,Depression ,Bipolar Disorder ,Substance Misuse ,Mental Health ,2.1 Biological and endogenous factors ,Mental health ,Good Health and Well Being ,Humans ,Male ,Adult ,Female ,Comorbidity ,Marijuana Abuse ,Middle Aged ,Circadian Rhythm ,Young Adult ,Chronotype ,Cannabis abuse ,Bipolar disorder ,Mania ,Medical and Health Sciences ,Psychology and Cognitive Sciences ,Psychiatry ,Clinical sciences ,Clinical and health psychology - Abstract
Comorbid cannabis use disorder (CUD) is disproportionately high in people with bipolar disorder (BD) and has been associated with worsening of BD symptoms. However, many people with BD report regularly using cannabis to ameliorate symptoms, including sleep disturbances. Sleep and circadian rhythm disturbances are hallmark features of BD that often precede the onset of mood symptoms. Genetic studies indicate that circadian disruption may predispose individuals towards both problematic cannabis use and BD, rather than cannabis use directly impacting BD symptoms. To further disentangle these hypotheses, we aimed to investigate the relationship between chronotype, cannabis use disorder (CUD) and BD mood symptoms. Data from 212 participants with BD I from the Pharmacogenomics of Bipolar Disorder study dataset were analyzed for this study. Participants were stratified by those diagnosed with co-morbid CUD and BD symptom variables, including the mean number of mood episodes per year and age of mood symptom onset for both depression and mania symptoms. The Basic Language Morningness scale (BALM) was used to assess chronotype. There was no interaction between morningness levels and CUD on BD symptoms, however both lower morningness and CUD were independently associated with earlier age of mood symptom onset. However, patients who reported initiating cannabis use post mood symptom onset had an earlier mood symptom age of onset compared to those who reported initiating cannabis use prior to mood symptom onset. These findings could provide further evidence that circadian rhythm disruption could be an underlying factor that predisposes individuals toward both CUD and BD.
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- 2024
36. Dementia risk scores, apolipoprotein E, and risk of Alzheimer's disease: One size does not fit all
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Andrews, Shea J, Boeriu, Ana I, Belloy, Michael E, Renton, Alan E, Fulton‐Howard, Brian, Brenowitz, Willa D, Yaffe, Kristine, and Initiative, for the Alzheimer's Disease Neuroimaging
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Biomedical and Clinical Sciences ,Biological Psychology ,Clinical Sciences ,Neurosciences ,Psychology ,Dementia ,Acquired Cognitive Impairment ,Alzheimer's Disease ,Aging ,Neurodegenerative ,Minority Health ,Social Determinants of Health ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Brain Disorders ,Prevention ,2.1 Biological and endogenous factors ,Neurological ,Good Health and Well Being ,Aged ,Aged ,80 and over ,Female ,Humans ,Male ,Alzheimer Disease ,Apolipoproteins E ,Ethnicity ,Incidence ,Risk Factors ,Racial Groups ,APOE ,dementia ,dementia risk scores ,race/ethnicity ,Alzheimer's Disease Neuroimaging Initiative ,Geriatrics ,Clinical sciences ,Biological psychology - Abstract
IntroductionEvaluating the generalizability of dementia risk scores, primarily developed in non-Latinx White (NLW) participants, and interactions with genetic risk factors in diverse populations is crucial for addressing health disparities.MethodsWe analyzed the association of the Cardiovascular Risk Factors, Aging, and Incidence of Dementia (CAIDE) and modified CAIDE (mCAIDE) scores with dementia risk using logistic regression models stratified by race/ethnicity in National Alzheimer's Coordinating Center (NACC) and Alzheimer's Disease Neuroimaging Initiative (ADNI), and assessed their interaction with apolipoprotein E (APOE).ResultsHigher CAIDE scores were associated with an increased risk of dementia in Asian, Latinx, and NLW participants but not in Black participants. In contrast, higher mCAIDE scores were also associated with an increased risk of dementia in Black participants. Unfavorable mCAIDE risk profiles exacerbated the apolipoprotein E*ε4 (APOE*ε4) risk effect and attenuated the APOE*ε2 protective effect.DiscussionOur findings underscore the importance of evaluating the validity of dementia risk scores in diverse populations for their use in personalized medicine approaches to promote brain health.HighlightsDementia risk scores demonstrate race/ethnic-specific effects on dementia risk. Unfavorable modifiable risk profiles moderate the effect of APOE on dementia risk. Dementia risk scores need to be validated in diverse populations.
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- 2024
37. The Effect of Platelet Dose on Outcomes after Platelet Rich Plasma Injections for Musculoskeletal Conditions: A Systematic Review and Meta-Analysis
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Berrigan, William, Tao, Frances, Kopcow, Joel, Park, Anna L, Allen, Isabel, Tahir, Peggy, Reddy, Aakash, and Bailowitz, Zachary
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Biomedical and Clinical Sciences ,Clinical Sciences ,Osteoarthritis ,Pain Research ,Chronic Pain ,Clinical Research ,Aging ,Arthritis ,6.1 Pharmaceuticals ,Musculoskeletal ,Platelet rich plasma ,Platelet dosing ,Platelet dosage ,Tendinopathy - Abstract
Purpose of reviewThis study aims to systematically review platelet dosage in platelet rich plasma (PRP) injections for common musculoskeletal conditions.Recent findingsNotable heterogeneity exists in the literature regarding platelet dosage. Clinical studies indicate that a higher dosage may lead to improved outcomes concerning pain relief, functional improvement, and chondroprotection in knee osteoarthritis (OA). However, the impact of dosing on other musculoskeletal pathologies remains uncertain. Our investigation identifies a potential dose-response relationship between platelet dose and PRP effectiveness for knee OA treatment, pinpointing an optimal threshold of greater than 10 billion platelets for favorable clinical outcomes. Notably, this effect appears more pronounced for functional outcomes than for pain relief. For other conditions, a lower dosage may suffice, although the existing literature lacks clarity on this matter. PRP dosage may significantly influence treatmentoutcomes, particularly in knee OA. Further research is warranted to elucidate optimal dosages for varying conditions.
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- 2024
38. Pyrazinamide Safety, Efficacy, and Dosing for Treating Drug-Susceptible Pulmonary Tuberculosis: A Phase 3, Randomized Controlled Clinical Trial
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Xu, Ava Y, Velásquez, Gustavo E, Zhang, Nan, Chang, Vincent K, Phillips, Patrick PJ, Nahid, Payam, Dorman, Susan E, Kurbatova, Ekaterina V, Whitworth, William C, Sizemore, Erin, Bryant, Kia, Carr, Wendy, Brown, Nicole E, Engle, Melissa L, Nhung, Nguyen Viet, Nsubuga, Pheona, Diacon, Andreas, Dooley, Kelly E, Chaisson, Richard E, Swindells, Susan, and Savic, Radojka M
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Pharmacology and Pharmaceutical Sciences ,Biomedical and Clinical Sciences ,Clinical Research ,Infectious Diseases ,Orphan Drug ,Tuberculosis ,Clinical Trials and Supportive Activities ,Emerging Infectious Diseases ,Patient Safety ,Rare Diseases ,6.1 Pharmaceuticals ,Good Health and Well Being ,Humans ,Pyrazinamide ,Female ,Male ,Antitubercular Agents ,Adult ,Tuberculosis ,Pulmonary ,Middle Aged ,Treatment Outcome ,Dose-Response Relationship ,Drug ,Young Adult ,dose–response ,exposure–response ,population pharmacokinetics ,pyrazinamide ,tuberculosis ,Medical and Health Sciences ,Respiratory System ,Cardiovascular medicine and haematology ,Clinical sciences - Abstract
Rationale: Optimizing pyrazinamide dosing is critical to improve treatment efficacy while minimizing toxicity during tuberculosis treatment. Study 31/AIDS Clinical Trials Group A5349 represents the largest phase 3 randomized controlled therapeutic trial to date for such an investigation. Objectives: We sought to report pyrazinamide pharmacokinetic parameters, risk factors for lower pyrazinamide exposure, and relationships between pyrazinamide exposure and efficacy and safety outcomes. We aimed to determine pyrazinamide dosing strategies that optimize risks and benefits. Methods: We analyzed pyrazinamide steady-state pharmacokinetic data using population nonlinear mixed-effects models. We evaluated the contribution of pyrazinamide exposure to long-term efficacy using parametric time-to-event models and safety outcomes using logistic regression. We evaluated optimal dosing with therapeutic windows targeting ≥95% durable cure and safety within the observed proportion of the primary safety outcome. Measurements and Main Results: Among 2,255 participants with 6,978 plasma samples, pyrazinamide displayed sevenfold exposure variability (151-1,053 mg·h/L). Body weight was not a clinically relevant predictor of drug clearance and thus did not justify the need for weight-banded dosing. Both clinical and safety outcomes were associated with pyrazinamide exposure, resulting in therapeutic windows of 231-355 mg · h/L for the control and 226-349 mg·h/L for the rifapentine-moxifloxacin regimen. Flat dosing of pyrazinamide at 1,000 mg would have permitted an additional 13.1% (n = 96) of participants allocated to the control and 9.2% (n = 70) to the rifapentine-moxifloxacin regimen dosed within the therapeutic window, compared with the current weight-banded dosing. Conclusions: Flat dosing of pyrazinamide at 1,000 mg/d would be readily implementable and could optimize treatment outcomes in drug-susceptible tuberculosis. Clinical trial registered with www.clinicaltrials.gov (NCT02410772).
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- 2024
39. The single-cell opioid responses in the context of HIV (SCORCH) consortium
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Ament, Seth A, Campbell, Rianne R, Lobo, Mary Kay, Receveur, Joseph P, Agrawal, Kriti, Borjabad, Alejandra, Byrareddy, Siddappa N, Chang, Linda, Clarke, Declan, Emani, Prashant, Gabuzda, Dana, Gaulton, Kyle J, Giglio, Michelle, Giorgi, Federico M, Gok, Busra, Guda, Chittibabu, Hadas, Eran, Herb, Brian R, Hu, Wen, Huttner, Anita, Ishmam, Mohammad R, Jacobs, Michelle M, Kelschenbach, Jennifer, Kim, Dong-Wook, Lee, Cheyu, Liu, Shuhui, Liu, Xiaokun, Madras, Bertha K, Mahurkar, Anup A, Mash, Deborah C, Mukamel, Eran A, Niu, Meng, O’Connor, Richard M, Pagan, Chelsea M, Pang, Alina PS, Pillai, Piya, Repunte-Canonigo, Vez, Ruzicka, W Brad, Stanley, Jay, Tickle, Timothy, Tsai, Shang-Yi A, Wang, Allen, Wills, Lauren, Wilson, Alyssa M, Wright, Susan N, Xu, Siwei, Yang, Junchen, Zand, Maryam, Zhang, Le, Zhang, Jing, Akbarian, Schahram, Buch, Shilpa, Cheng, Christine S, Corley, Michael J, Fox, Howard S, Gerstein, Mark, Gummuluru, Suryaram, Heiman, Myriam, Ho, Ya-Chi, Kellis, Manolis, Kenny, Paul J, Kluger, Yuval, Milner, Teresa A, Moore, David J, Morgello, Susan, Ndhlovu, Lishomwa C, Rana, Tariq M, Sanna, Pietro Paolo, Satterlee, John S, Sestan, Nenad, Spector, Stephen A, Spudich, Serena, Tilgner, Hagen U, Volsky, David J, White, Owen R, Williams, Dionne W, and Zeng, Hongkui
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Pharmacology and Pharmaceutical Sciences ,Medical Microbiology ,Biomedical and Clinical Sciences ,HIV/AIDS ,Sexually Transmitted Infections ,Substance Misuse ,Opioids ,Opioid Misuse and Addiction ,Brain Disorders ,Drug Abuse (NIDA only) ,Neurosciences ,Infectious Diseases ,Behavioral and Social Science ,2.1 Biological and endogenous factors ,2.6 Resources and infrastructure (aetiology) ,Good Health and Well Being ,Animals ,Humans ,Analgesics ,Opioid ,Brain ,HIV Infections ,Opioid-Related Disorders ,Single-Cell Analysis ,Comorbidity ,Biological Sciences ,Medical and Health Sciences ,Psychology and Cognitive Sciences ,Psychiatry ,Clinical sciences ,Biological psychology ,Clinical and health psychology - Abstract
Substance use disorders (SUD) and drug addiction are major threats to public health, impacting not only the millions of individuals struggling with SUD, but also surrounding families and communities. One of the seminal challenges in treating and studying addiction in human populations is the high prevalence of co-morbid conditions, including an increased risk of contracting a human immunodeficiency virus (HIV) infection. Of the ~15 million people who inject drugs globally, 17% are persons with HIV. Conversely, HIV is a risk factor for SUD because chronic pain syndromes, often encountered in persons with HIV, can lead to an increased use of opioid pain medications that in turn can increase the risk for opioid addiction. We hypothesize that SUD and HIV exert shared effects on brain cell types, including adaptations related to neuroplasticity, neurodegeneration, and neuroinflammation. Basic research is needed to refine our understanding of these affected cell types and adaptations. Studying the effects of SUD in the context of HIV at the single-cell level represents a compelling strategy to understand the reciprocal interactions among both conditions, made feasible by the availability of large, extensively-phenotyped human brain tissue collections that have been amassed by the Neuro-HIV research community. In addition, sophisticated animal models that have been developed for both conditions provide a means to precisely evaluate specific exposures and stages of disease. We propose that single-cell genomics is a uniquely powerful technology to characterize the effects of SUD and HIV in the brain, integrating data from human cohorts and animal models. We have formed the Single-Cell Opioid Responses in the Context of HIV (SCORCH) consortium to carry out this strategy.
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- 2024
40. A multi-institutional study to investigate the sparing effect after whole brain electron FLASH in mice: Reproducibility and temporal evolution of functional, electrophysiological, and neurogenic endpoints
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Drayson, Olivia GG, Melemenidis, Stavros, Katila, Nikita, Viswanathan, Vignesh, Kramár, Enikö A, Zhang, Richard, Kim, Rachel, Ru, Ning, Petit, Benoit, Dutt, Suparna, Manjappa, Rakesh, Ashraf, M Ramish, Lau, Brianna, Soto, Luis, Skinner, Lawrie, Yu, Amu S, Surucu, Murat, Maxim, Peter G, Zebadua-Ballasteros, Paola, Wood, Marcelo A, Montay-Gruel, Pierre, Baulch, Janet E, Vozenin, Marie-Catherine, Loo, Billy W, and Limoli, Charles L
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Medical and Biological Physics ,Biomedical and Clinical Sciences ,Clinical Sciences ,Physical Sciences ,Oncology and Carcinogenesis ,Neurosciences ,Cancer ,Rare Diseases ,6.5 Radiotherapy and other non-invasive therapies ,Neurological ,Animals ,Mice ,Female ,Reproducibility of Results ,Neurogenesis ,Brain ,Radiotherapy Dosage ,Long-Term Potentiation ,Hippocampus ,Mice ,Inbred C57BL ,Radiotherapy ,FLASH ,Intercomparison ,Neurobehavior ,Electrophysiology ,Neuroinflammation ,Other Physical Sciences ,Oncology & Carcinogenesis ,Clinical sciences ,Oncology and carcinogenesis ,Medical and biological physics - Abstract
Background and purposeUltra-high dose-rate radiotherapy (FLASH) has been shown to mitigate normal tissue toxicities associated with conventional dose rate radiotherapy (CONV) without compromising tumor killing in preclinical models. A prominent challenge in preclinical radiation research, including FLASH, is validating both the physical dosimetry and the biological effects across multiple institutions.Materials and methodsWe previously demonstrated dosimetric reproducibility of two different electron FLASH devices at separate institutions using standardized phantoms and dosimeters. In this study, tumor-free adult female mice were given 10 Gy whole brain FLASH and CONV irradiation at both institutions and evaluated for the reproducibility and temporal evolution of multiple neurobiological endpoints.ResultsFLASH sparing of behavioral performance on novel object recognition (4 months post-irradiation) and of electrophysiologic long-term potentiation (LTP, 5 months post-irradiation) was reproduced between institutions. Differences between FLASH and CONV on the endpoints of hippocampal neurogenesis (Sox2, doublecortin), neuroinflammation (microglial activation), and electrophysiology (LTP) were not observed at early times (48 h to 2 weeks), but recovery of immature neurons by 3 weeks was greater with FLASH.ConclusionIn summary, we demonstrated reproducible FLASH sparing effects on the brain between two different beams at two different institutions with validated dosimetry. FLASH sparing effects on the endpoints evaluated manifested at later but not the earliest time points.
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- 2024
41. Preferences of people living with HIV for features of tuberculosis preventive treatment regimens in Uganda: a discrete choice experiment
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Aschmann, Hélène E, Musinguzi, Allan, Kadota, Jillian L, Namale, Catherine, Kakeeto, Juliet, Nakimuli, Jane, Akello, Lydia, Welishe, Fred, Nakitende, Anne, Berger, Christopher, Dowdy, David W, Cattamanchi, Adithya, Semitala, Fred C, and Kerkhoff, Andrew D
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Medical Microbiology ,Biomedical and Clinical Sciences ,Emerging Infectious Diseases ,Infectious Diseases ,Rare Diseases ,Prevention ,Clinical Research ,Sexually Transmitted Infections ,HIV/AIDS ,Tuberculosis ,6.1 Pharmaceuticals ,Infection ,Good Health and Well Being ,Humans ,Female ,Uganda ,Male ,Adult ,HIV Infections ,Middle Aged ,Antitubercular Agents ,Patient Preference ,Isoniazid ,Bayes Theorem ,Choice Behavior ,Young Adult ,TB ,latent tuberculosis infection ,person‐centred care ,tuberculosis preventive treatment ,values and preferences ,Clinical Sciences ,Public Health and Health Services ,Other Medical and Health Sciences ,Clinical sciences ,Epidemiology ,Public health - Abstract
IntroductionTuberculosis (TB) preventive treatment (TPT) is recommended for people living with HIV (PLHIV) in high TB burden settings. While 6 months of daily isoniazid remains widely used, shorter regimens are now available. However, little is known about preferences of PLHIV for key features of TPT regimens.MethodsFrom July to November 2022, we conducted a discrete choice experiment among adult PLHIV engaged in care at an urban HIV clinic in Kampala, Uganda. Participants chose between two hypothetical TPT regimens with five different features (pills per dose, frequency, duration, need for adjusted antiretroviral therapy [ART] dosage and side effects), organized across nine random choice tasks. We analysed preferences using hierarchical Bayesian estimation, latent class analysis and willingness-to-trade simulations.ResultsOf 400 PLHIV, 392 (median age 44, 72% female, 91% TPT-experienced) had high-quality choice task responses. Pills per dose was the most important attribute (relative importance 32.4%, 95% confidence interval [CI] 31.6-33.2), followed by frequency (20.5% [95% CI 19.7-21.3]), duration (19.5% [95% CI 18.6-20.5]) and need for ART dosage adjustment (18.2% [95% CI 17.2-19.2]). Latent class analysis identified three preference groups: one prioritized less frequent, weekly dosing (N = 222; 57%); another was averse to ART dosage adjustment (N = 107; 27%); and the last prioritized short regimens with fewer side effects (N = 63; 16%). All groups highly valued fewer pills per dose. Overall, participants were willing to accept a regimen of 2.8 months' additional duration [95% CI: 2.4-3.2] to reduce pills per dose from five to one, 3.6 [95% CI 2.4-4.8] months for weekly rather than daily dosing and 2.2 [95% CI 1.3-3.0] months to avoid ART dosage adjustment.ConclusionsTo align with preferences of PLHIV in Uganda, decision-makers should prioritize the development and implementation of TPT regimens with fewer pills, less frequent dosing and no need for ART dosage adjustment, rather than focus primarily on duration of treatment.
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- 2024
42. Significant age‐related differences between lower leg muscles of older and younger female subjects detected by ultrashort echo time magnetization transfer modeling
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Jerban, Saeed, Mohammadi, Hamidreza Shaterian, Athertya, Jiyo S, Afsahi, Amir Masoud, Shojaeiadib, Niloofar, Moazamian, Dina, Ward, Samuel R, Woods, Gina, Chung, Christine B, Du, Jiang, and Chang, Eric Y
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Biomedical and Clinical Sciences ,Clinical Sciences ,Clinical Research ,Aging ,Biomedical Imaging ,Musculoskeletal ,Humans ,Female ,Adult ,Muscle ,Skeletal ,Leg ,Magnetic Resonance Imaging ,Aged ,Young Adult ,Reproducibility of Results ,macromolecular protons ,magnetization transfer ,MRI ,muscle ,myotendinous junction ,UTE ,Medicinal and Biomolecular Chemistry ,Biomedical Engineering ,Nuclear Medicine & Medical Imaging ,Clinical sciences ,Biomedical engineering - Abstract
Magnetization transfer (MT) magnetic resonance imaging (MRI) can be used to estimate the fraction of water and macromolecular proton pools in tissues. MT modeling paired with ultrashort echo time acquisition (UTE-MT modeling) has been proposed to improve the evaluation of the myotendinous junction and fibrosis in muscle tissues, which the latter increases with aging. This study aimed to determine if the UTE-MT modeling technique is sensitive to age-related changes in the skeletal muscles of the lower leg. Institutional review board approval was obtained, and all recruited subjects provided written informed consent. The legs of 31 healthy younger (28.1 ± 6.1 years old, BMI = 22.3 ± 3.5) and 20 older (74.7 ± 5.5 years old, BMI = 26.7 ± 5.9) female subjects were imaged using UTE sequences on a 3 T MRI scanner. MT ratio (MTR), macromolecular fraction (MMF), macromolecular T2 (T2-MM), and water T2 (T2-W) were calculated using UTE-MT modeling for the anterior tibialis (ATM), posterior tibialis (PTM), soleus (SM), and combined lateral muscles. Results were compared between groups using the Wilcoxon rank sum test. Three independent observers selected regions of interest (ROIs) and processed UTE-MRI images separately, and the intraclass correlation coefficient (ICC) was calculated for a reproducibility study. Significantly lower mean MTR and MMF values were present in the older compared with the younger group in all studied lower leg muscles. T2-MM showed significantly lower values in the older group only for PTM and SM muscles. In contrast, T2-W showed significantly higher values in the older group. The age-related differences were more pronounced for MMF (-17 to -19%) and T2-W (+20 to 47%) measurements in all muscle groups compared with other investigated MR measures. ICCs were higher than 0.93, indicating excellent consistency between the ROI selection and MRI measurements of independent readers. As demonstrated by significant differences between younger and older groups, this research emphasizes the potential of UTE-MT MRI techniques in evaluating age-related skeletal muscle changes.
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- 2024
43. Quantitative ultrashort echo time MR imaging of knee osteochondral junction: An ex vivo feasibility study
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Athertya, Jiyo S, Suprana, Arya, Lo, James, Lombardi, Alecio F, Moazamian, Dina, Chang, Eric Y, Du, Jiang, and Ma, Yajun
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Engineering ,Biomedical Engineering ,Biomedical Imaging ,Clinical Research ,Osteoarthritis ,Aging ,Arthritis ,4.2 Evaluation of markers and technologies ,Musculoskeletal ,Humans ,Feasibility Studies ,Magnetic Resonance Imaging ,Knee Joint ,Male ,Female ,Middle Aged ,Cartilage ,Articular ,Aged ,Time Factors ,Osteoarthritis ,Knee ,Adult ,Cadaver ,knee joint ,osteochondral junction ,quantitative ,ultrashort echo time ,Medicinal and Biomolecular Chemistry ,Clinical Sciences ,Nuclear Medicine & Medical Imaging ,Clinical sciences ,Biomedical engineering - Abstract
Compositional changes can occur in the osteochondral junction (OCJ) during the early stages and progressive disease evolution of knee osteoarthritis (OA). However, conventional magnetic resonance imaging (MRI) sequences are not able to image these regions efficiently because of the OCJ region's rapid signal decay. The development of new sequences able to image and quantify OCJ region is therefore highly desirable. We developed a comprehensive ultrashort echo time (UTE) MRI protocol for quantitative assessment of OCJ region in the knee joint, including UTE variable flip angle technique for T1 mapping, UTE magnetization transfer (UTE-MT) modeling for macromolecular proton fraction (MMF) mapping, UTE adiabatic T1ρ (UTE-AdiabT1ρ) sequence for T1ρ mapping, and multi-echo UTE sequence for T2* mapping. B1 mapping based on the UTE actual flip angle technique was utilized for B1 correction in T1, MMF, and T1ρ measurements. Ten normal and one abnormal cadaveric human knee joints were scanned on a 3T clinical MRI scanner to investigate the feasibility of OCJ imaging using the proposed protocol. Volumetric T1, MMF, T1ρ, and T2* maps of the OCJ, as well as the superficial and full-thickness cartilage regions, were successfully produced using the quantitative UTE imaging protocol. Significantly lower T1, T1ρ, and T2* relaxation times were observed in the OCJ region compared with those observed in both the superficial and full-thickness cartilage regions, whereas MMF showed significantly higher values in the OCJ region. In addition, all four UTE biomarkers showed substantial differences in the OCJ region between normal and abnormal knees. These results indicate that the newly developed 3D quantitative UTE imaging techniques are feasible for T1, MMF, T1ρ, and T2* mapping of knee OCJ, representative of a promising approach for the evaluation of compositional changes in early knee OA.
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- 2024
44. Primary cortical cell tri-culture to study effects of amyloid-β on microglia function and neuroinflammatory response
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Kim, Hyehyun, Le, Bryan, Goshi, Noah, Zhu, Kan, Grodzki, Ana Cristina, Lein, Pamela J, Zhao, Min, and Seker, Erkin
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Biomedical and Clinical Sciences ,Biological Psychology ,Clinical Sciences ,Neurosciences ,Psychology ,Dementia ,Aging ,Neurodegenerative ,Brain Disorders ,Acquired Cognitive Impairment ,2.1 Biological and endogenous factors ,1.1 Normal biological development and functioning ,Neurological ,Animals ,Microglia ,Amyloid beta-Peptides ,Rats ,Coculture Techniques ,Astrocytes ,Cells ,Cultured ,Neurons ,Cerebral Cortex ,Neuroinflammatory Diseases ,Rats ,Sprague-Dawley ,Cytokines ,Alzheimer's disease ,amyloid-beta ,cell motility ,cytokine profile ,live cell imaging ,microglia ,neural cell culture ,neuroinflammation ,phagocytosis ,Cognitive Sciences ,Neurology & Neurosurgery ,Clinical sciences ,Biological psychology - Abstract
BackgroundMicroglia play a critical role in neurodegenerative disorders, such as Alzheimer's disease, where alterations in microglial function may result in pathogenic amyloid-β (Aβ) accumulation, chronic neuroinflammation, and deleterious effects on neuronal function. However, studying these complex factors in vivo, where numerous confounding processes exist, is challenging, and until recently, in vitro models have not allowed sustained culture of critical cell types in the same culture.ObjectiveWe employed a rat primary tri-culture (neurons, astrocytes, and microglia) model and compared it to co-culture (neurons and astrocytes) and mono-culture (microglia) to study microglial function (i.e., motility and Aβ clearance) and proteomic response to exogenous Aβ.MethodsThe cultures were exposed to fluorescently-labeled Aβ (FITC-Aβ) particles for varying durations. Epifluorescence microscopy images were analyzed to quantify the number of FITC-Aβ particles and assess cytomorphological features. Cytokine profiles from conditioned media were obtained. Live-cell imaging was employed to extract microglia motility parameters.ResultsFITC-Aβ particles were more effectively cleared in the tri-culture compared to the co-culture. This was attributed to microglia engulfing FITC-Aβ particles, as confirmed via epifluorescence and confocal microscopy. FITC-Aβ treatment significantly increased microglia size, but had no significant effect on neuronal surface coverage or astrocyte size. Upon FITC-Aβ treatment, there was a significant increase in proinflammatory cytokines in tri-culture, but not in co-culture. Aβ treatment altered microglia motility evident as a swarming-like motion.ConclusionsThe results suggest that neuron-astrocyte-microglia interactions influence microglia function and highlight the utility of the tri-culture model for studies of neuroinflammation, neurodegeneration, and cell-cell communication.
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- 2024
45. Regular cannabis smoking and carotid artery calcification in the Multi-Ethnic Study of Atherosclerosis (MESA)
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Corroon, Jamie, Bradley, Ryan, Grant, Igor, Daniels, Michael R, Denenberg, Julie, Bancks, Michael P, and Allison, Matthew A
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Biomedical and Clinical Sciences ,Cardiovascular Medicine and Haematology ,Clinical Sciences ,Heart Disease ,Tobacco Smoke and Health ,Minority Health ,Tobacco ,Aging ,Prevention ,Cannabinoid Research ,Atherosclerosis ,Cardiovascular ,Clinical Research ,Substance Misuse ,Respiratory ,Good Health and Well Being ,Humans ,Male ,Female ,Carotid Artery Diseases ,Aged ,United States ,Prevalence ,Middle Aged ,Marijuana Smoking ,Vascular Calcification ,Cross-Sectional Studies ,Aged ,80 and over ,Risk Assessment ,Risk Factors ,Plaque ,Atherosclerotic ,Computed Tomography Angiography ,Prospective Studies ,atherosclerosis ,cannabis ,cardiovascular disease ,carotid artery disease ,marijuana ,Cardiovascular System & Hematology ,Cardiovascular medicine and haematology ,Clinical sciences - Abstract
BackgroundStudies on cannabis use and adverse cardiovascular outcomes have reported conflicting results. Research on its relationship to calcified arterial plaque remains limited.MethodsCross-sectional data from 2152 participants at Exam 6 (2016-2018) in the Multi-Ethnic Study of Atherosclerosis (MESA) were analyzed, including self-reported cannabis smoking patterns and carotid artery calcification (CAC) as measured via computed tomography. Multivariable relative and absolute risk regression models were used to estimate adjusted prevalence ratios (PRs) and prevalence differences, respectively, for the presence of calcified plaque. Multivariable linear regression was then used to compare group differences in the extent of CAC in those with calcified plaque.ResultsA minority of participants (n = 159, 7.4%) reported a history of regular cannabis smoking. Among all participants, 36.1% (n = 777) had detectable CAC. In models adjusted for demographics, behavioral, and clinical cardiovascular disease factors, a history of regular cannabis smoking was not associated with the prevalence of CAC in either common carotid artery (PR: 1.14, 95% CI: 0.88 to 1.49). In the subset of participants with calcified plaque, and in separate fully adjusted multivariable linear regression models, a history of regular cannabis smoking was not associated with increased calcium volume (difference = 7.7%, 95% CI: -21.8 to 48.5), calcium density (difference = 0.4%, 95% CI: -6.6 to 7.9), or Agatston score (difference = 32.1%, 95% CI: -31.8 to 155.8) in either carotid artery. Models exploring potential effect modification by age, race/ethnicity, and tobacco smoking status showed no significant association, except for higher CAC prevalence in men with a history of regular cannabis smoking.ConclusionsIn a racially and ethnically diverse cohort of older adults with a moderately high prevalence of CAC, no associations were found between a history of regular cannabis smoking, duration, or recency of cannabis smoking, and the prevalence of carotid calcified plaque. These findings were consistent across age, race/ethnicity, and cigarette smoking, except for an increased prevalence in men with a history of regular cannabis smoking. Similarly, in a subgroup with CAC, no association was found between a history of regular cannabis smoking and extent of calcification as measured by volume, density, and Agatston score.
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- 2024
46. Associations between mesolimbic connectivity, and alcohol use from adolescence to adulthood
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Morales, Angelica M, Jones, Scott A, Carlson, Birgitta, Kliamovich, Dakota, Dehoney, Joseph, Simpson, Brooke L, Dominguez-Savage, Kalene A, Hernandez, Kristina O, Lopez, Daniel A, Baker, Fiona C, Clark, Duncan B, Goldston, David B, Luna, Beatriz, Nooner, Kate B, Muller-Oehring, Eva M, Tapert, Susan F, Thompson, Wesley K, and Nagel, Bonnie J
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Biological Psychology ,Pharmacology and Pharmaceutical Sciences ,Biomedical and Clinical Sciences ,Psychology ,Pediatric ,Underage Drinking ,Women's Health ,Substance Misuse ,Basic Behavioral and Social Science ,Brain Disorders ,Behavioral and Social Science ,Neurosciences ,Mental Health ,Alcoholism ,Alcohol Use and Health ,2.1 Biological and endogenous factors ,Oral and gastrointestinal ,Mental health ,Good Health and Well Being ,Humans ,Male ,Adolescent ,Female ,Young Adult ,Ventral Tegmental Area ,Child ,Alcohol Drinking ,Magnetic Resonance Imaging ,Neural Pathways ,Longitudinal Studies ,Adult ,Limbic System ,Nucleus Accumbens ,Ventral tegmental area ,Alcohol ,Sex differences ,Longitudinal ,Mesolimbic ,MRI ,Clinical Sciences ,Cognitive Sciences ,Biological psychology ,Clinical and health psychology - Abstract
Dopaminergic projections from the ventral tegmental area (VTA) to limbic regions play a key role in the initiation and maintenance of substance use; however, the relationship between mesolimbic resting-state functional connectivity (RSFC) and alcohol use during development remains unclear. We examined the associations between alcohol use and VTA RSFC to subcortical structures in 796 participants (12-21 years old at baseline, 51 % female) across 9 waves of longitudinal data from the National Consortium on Alcohol and Neurodevelopment in Adolescence. Linear mixed effects models included interactions between age, sex, and alcohol use, and best fitting models were selected using log-likelihood ratio tests. Results demonstrated a positive association between alcohol use and VTA RSFC to the nucleus accumbens. Age was associated with VTA RSFC to the amygdala and hippocampus, and an age-by-alcohol use interaction on VTA-globus pallidus connectivity was driven by a positive association between alcohol and VTA-globus pallidus RSFC in adolescence, but not adulthood. On average, male participants exhibited greater VTA RSFC to the amygdala, nucleus accumbens, caudate, hippocampus, globus pallidus, and thalamus. Differences in VTA RSFC related to age, sex, and alcohol, may inform our understanding of neurobiological risk and resilience for alcohol use and other psychiatric disorders.
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- 2024
47. Physical inactivity exacerbates pathologic inflammatory signalling at the single cell level in patients with systemic lupus
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Patterson, Sarah L, Van Phan, Hoang, Ye, Chun Jimmie, Lanata, Cristina, González, Sebastián Cruz, Park, Joonsuk, Criswell, Lindsey A, Barbour, Kamil E, Yazdany, Jinoos, Dall’Era, Maria, Sirota, Marina, Katz, Patricia, and Langelier, Charles R
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Biomedical and Clinical Sciences ,Clinical Sciences ,Immunology ,Lupus ,Genetics ,Human Genome ,Women's Health ,Clinical Research ,Autoimmune Disease ,2.1 Biological and endogenous factors ,1.1 Normal biological development and functioning ,Inflammatory and immune system ,Good Health and Well Being ,Humans ,Lupus Erythematosus ,Systemic ,Female ,Male ,Signal Transduction ,Single-Cell Analysis ,Adult ,Middle Aged ,Exercise ,Inflammation ,Cytokines ,Gene Expression Profiling ,Sedentary Behavior ,Transcriptome ,Leukocytes ,Mononuclear ,arthritis ,Physical activity ,Single transcriptomics ,Lifestyle behaviors ,Rheumatoid arthritis ,Single cell transcriptomics ,Public Health and Health Services ,Clinical sciences ,Epidemiology - Abstract
BackgroundPhysical activity is an adjunctive therapy that improves symptoms in people living with systemic lupus erythematosus (SLE), yet the mechanisms underlying this benefit remain unclear.MethodsWe carried out a cohort study of 123 patients with SLE enrolled in the California Lupus Epidemiology Study (CLUES). The primary predictor variable was self-reported physical activity, which was measured using a previously validated instrument. We analyzed peripheral blood mononuclear cell (PBMC) single-cell RNA sequencing (scRNA-seq) data available from the cohort. From the scRNA-seq data, we compared immune cell frequencies, cell-specific gene expression, biological signalling pathways, and upstream cytokine activation states between physically active and inactive patients, adjusting for age, sex and race.FindingsWe found that physical activity influenced immune cell frequencies, with sedentary patients most notably demonstrating greater CD4+ T cell lymphopenia (Padj = 0.028). Differential gene expression analysis identified a transcriptional signature of physical inactivity across five cell types. In CD4+ and CD8+ T cells, this signature was characterized by 686 and 445 differentially expressed genes (Padj
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- 2024
48. Diffusion MRI is superior to quantitative T2-FLAIR mismatch in predicting molecular subtypes of human non-enhancing gliomas
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Cho, Nicholas S, Sanvito, Francesco, Le, Viên Lam, Oshima, Sonoko, Teraishi, Ashley, Yao, Jingwen, Telesca, Donatello, Raymond, Catalina, Pope, Whitney B, Nghiemphu, Phioanh L, Lai, Albert, Salamon, Noriko, Cloughesy, Timothy F, and Ellingson, Benjamin M
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Biomedical Imaging ,Cancer ,Brain Cancer ,Precision Medicine ,Rare Diseases ,Neurosciences ,Brain Disorders ,6.1 Pharmaceuticals ,Humans ,Glioma ,Brain Neoplasms ,Male ,Female ,Middle Aged ,Diffusion Magnetic Resonance Imaging ,Adult ,Retrospective Studies ,Aged ,Tumor Burden ,Sensitivity and Specificity ,Image Interpretation ,Computer-Assisted ,Mutation ,Predictive Value of Tests ,Isocitrate Dehydrogenase ,T2-FLAIR mismatch sign ,IDH-mutant glioma ,MRI ,Diffusion MRI ,Digital subtraction ,Clinical Sciences ,Nuclear Medicine & Medical Imaging ,Clinical sciences - Abstract
PurposeThis study compared the classification performance of normalized apparent diffusion coefficient (nADC) with percentage T2-FLAIR mismatch-volume (%T2FM-volume) for differentiating between IDH-mutant astrocytoma (IDHm-A) and other glioma molecular subtypes.MethodsA total of 105 non-enhancing gliomas were studied. T2-FLAIR digital subtraction maps were used to identify T2FM and T2-FLAIR non-mismatch (T2FNM) subregions within tumor volumes of interest (VOIs). Median nADC from the whole tumor, T2FM, and T2NFM subregions and %T2FM-volume were obtained. IDHm-A classification analyses using receiver-operating characteristic curves and multiple logistic regression were performed in addition to exploratory survival analyses.ResultsT2FM subregions had significantly higher nADC than T2FNM subregions within IDHm-A with ≥ 25% T2FM-volume (P
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- 2024
49. Skeletal Muscle Composition, Power, and Mitochondrial Energetics in Older Men and Women With Knee Osteoarthritis
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Distefano, Giovanna, Harrison, Stephanie, Lynch, John, Link, Thomas M, Kramer, Philip A, Ramos, Sofhia V, Mau, Theresa, Coen, Paul M, Sparks, Lauren M, Goodpaster, Bret H, Cawthon, Peggy M, Cauley, Jane A, and Lane, Nancy E
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Biomedical and Clinical Sciences ,Clinical Sciences ,Arthritis ,Pain Research ,Women's Health ,Clinical Research ,Aging ,Chronic Pain ,Musculoskeletal ,Humans ,Osteoarthritis ,Knee ,Female ,Male ,Aged ,Muscle ,Skeletal ,Severity of Illness Index ,Sex Factors ,Aged ,80 and over ,Muscle Strength ,Oxidative Phosphorylation ,Energy Metabolism ,Mitochondria ,Muscle - Abstract
ObjectiveOur objective was to investigate the overall and sex-specific relationships between the presence and severity of knee osteoarthritis (KOA) and muscle composition, power, and energetics in older adults.MethodsMale and female patients (n = 655, mean ± SD age 76.1 ± 4.9 years; 57% female) enrolled in the Study of Muscle, Mobility, and Aging completed standing knee radiographs and knee pain assessments. Participants were divided into three groups using Kellgren-Lawrence grade (KLG) of KOA severity (0-1, 2, or 3-4). Outcome measures included whole-body muscle mass, thigh fat-free muscle (FFM) volume and muscle fat infiltration (MFI), leg power, specific power (power normalized to muscle volume), and muscle mitochondrial energetics.ResultsOverall, the presence and severity of KOA is associated with greater MFI, lower leg power and specific power, and reduced oxidative phosphorylation (P trend < 0.036). Sex-specific analysis revealed reduced energetics only in female patients with KOA (P trend < 0.007) compared to female patients without KOA. In models adjusted for age, sex, race, nonsteroidal anti-inflammatory drug administration, site or technician, physical activity, height, and participants with abdominal adiposity with KLG 3 to 4 had greater MFI (mean 0.008%, 95% confidence interval [CI] 0.004%-0.011%) and lower leg power (mean -51.56 W, 95% CI -74.03 to -29.10 W) and specific power (mean -5.38 W/L, 95% CI -7.31 to -3.45 W/L) than those with KLG 0 to 1. No interactions were found between pain and KLG status. Among those with KOA, MFI and oxidative phosphorylation were associated with thigh FFM volume, leg power, and specific power.ConclusionMuscle health is associated with the presence and severity of KOA and differs by sex. Although muscle composition and power are lower in both male and female patients with KOA, regardless of pain status, mitochondrial energetics is reduced only in female patients.
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- 2024
50. Probiotic therapy modulates the brain-gut-liver microbiota axis in a mouse model of traumatic brain injury
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Amaral, Wellington Z, Kokroko, Natalie, Treangen, Todd J, Villapol, Sonia, and Gomez-Pinilla, Fernando
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Microbiology ,Biological Sciences ,Dietary Supplements ,Liver Disease ,Neurosciences ,Traumatic Brain Injury (TBI) ,Complementary and Integrative Health ,Nutrition ,Biotechnology ,Traumatic Head and Spine Injury ,Physical Injury - Accidents and Adverse Effects ,Digestive Diseases ,Brain Disorders ,Microbiome ,2.1 Biological and endogenous factors ,5.1 Pharmaceuticals ,Oral and gastrointestinal ,Animals ,Probiotics ,Brain Injuries ,Traumatic ,Gastrointestinal Microbiome ,Mice ,Brain-Gut Axis ,Liver ,Disease Models ,Animal ,Male ,Mice ,Inbred C57BL ,Hippocampus ,Brain ,Microbiota ,Brain injury ,Gut ,Lipidomics ,Biochemistry and Cell Biology ,Medical Biochemistry and Metabolomics ,Clinical Sciences ,Biochemistry & Molecular Biology ,Biochemistry and cell biology ,Medical biochemistry and metabolomics - Abstract
The interplay between gut microbiota and host health is crucial for maintaining the overall health of the body and brain, and it is even more crucial how changes in the bacterial profile can influence the aftermath of traumatic brain injury (TBI). We studied the effects of probiotic treatment after TBI to identify potential changes in hepatic lipid species relevant to brain function. Bioinformatic analysis of the gut microbiota indicated a significant increase in the Firmicutes/Bacteroidetes ratio in the probiotic-treated TBI group compared to sham and untreated TBI groups. Although strong correlations between gut bacteria and hepatic lipids were found in sham mice, TBI disrupted these links, and probiotic treatment did not fully restore them. Probiotic treatment influenced systemic glucose metabolism, suggesting altered metabolic regulation. Behavioral tests confirmed memory improvement in probiotic-treated TBI mice. While TBI reduced hippocampal mRNA expression of CaMKII and CREB, probiotics reversed these effects yet did not alter BDNF mRNA levels. Elevated pro-inflammatory markers TNF-α and IL1-β in TBI mice were not significantly affected by probiotic treatment, pointing to different mechanisms underlying the probiotic benefits. In summary, our study suggests that TBI induces dysbiosis, alters hepatic lipid profiles, and preemptive administration of Lactobacillus helveticus and Bifidobacterium longum probiotics can counter neuroplasticity deficits and memory impairment. Altogether, these findings highlight the potential of probiotics for attenuating TBI's detrimental cognitive and metabolic effects through gut microbiome modulation and hepatic lipidomic alteration, laying the groundwork for probiotics as a potential TBI therapy.
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- 2024
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