1. Conformational States of Bovine Pancreatic Ribonuclease A Observed by Normal and Partially Relaxed Carbon 13 Nuclear Magnetic Resonance
- Author
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Victor Glushko, Frank R. N. Gurd, and Peter J. Lawson
- Subjects
Performic acid ,biology ,Chemistry ,Carbon-13 ,Relaxation (NMR) ,Resonance ,Cell Biology ,Nuclear magnetic resonance spectroscopy ,Bovine pancreatic ribonuclease ,Biochemistry ,Crystallography ,chemistry.chemical_compound ,Protein structure ,Nuclear magnetic resonance ,biology.protein ,Native state ,Molecular Biology - Abstract
Proton-decoupled Fourier transform nuclear magnetic resonance of natural abundance 13C was used to obtain spectra of ribonuclease A and its oxidized derivative at a set of pH values ranging from pH 1.40 to 6.72 at 45°. Observations on the native conformation were made at pH 4.14 and 6.55, and on the denatured conformation at pH 2.12 and below. In addition, the disrupted structure obtained by performic acid oxidation of the disulfide bonds was observed at several pH values. The loss of the native structure was associated with sharpening of the resonance bands. A tentative assignment was made for the unmodified ribonuclease A at pH 1.46 based on resonance positions of free amino acids and peptides. Although a good fit to the data was obtained, further development is required for unequivocal assignment. Partially relaxed spectra were used to obtain spin-lattice relaxation times (T1) for certain carbon types. These values are traced through several pH values for both ribonuclease A and its oxidized derivatives. Pairs of effective rotational correlation times (τeff) were derived from the T1 values of certain aliphatic resonances. By considering data from fluorescence depolarization experiments and observed line widths, it was possible to exclude one of the τeff values in the majority of cases. The results were interpreted in terms of increased segmental mobility in the denatured states, especially for α carbon nuclei that appear relatively restrained in the native state.
- Published
- 1972
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