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Most existing data-driven power system short-term voltage stability assessment (STVSA) approaches presume class-balanced input data. However, in practical applications, the occurrence of short-term voltage instability following a disturbance is minimal, leading to a significant class imbalance problem and a consequent decline in classifier performance. This work proposes a Transformer-based STVSA method to address this challenge. By utilizing the basic Transformer architecture, a stability assessment Transformer (StaaT) is developed as a classification model to reflect the correlation between the operational states of the system and the resulting stability outcomes. To combat the negative impact of imbalanced datasets, this work employs a conditional Wasserstein generative adversarial network with gradient penalty (CWGAN-GP) for synthetic data generation, aiding in the creation of a balanced, representative training set for the classifier. Semi-supervised clustering learning is implemented to enhance clustering quality, addressing the lack of a unified quantitative criterion for short-term voltage stability. Numerical tests on the IEEE 39-bus test system extensively demonstrate that the proposed method exhibits robust performance under class imbalances up to 100:1 and noisy environments, and maintains consistent effectiveness even with an increased penetration of renewable energy. Comparative results reveal that the CWGAN-GP generates more balanced datasets than traditional oversampling methods and that the StaaT outperforms other deep learning algorithms. This study presents a compelling solution for real-world STVSA applications that often face class imbalance and data noise challenges. [Display omitted] • The class imbalance issue is addressed using balanced samples generated by CWGAN-GP. • StaaT with multi-head self-attention mechanisms learns important features. • SFCM labels samples undeterminable directly by domain knowledge. • StaaT exceeds other methods, showing robustness amid class imbalances and noises. [ABSTRACT FROM AUTHOR]