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Single nitrogen vacancy (NV) centers in diamond have been used extensively for high-sensitivity nanoscale sensing, but conventional approaches use confocal microscopy to measure individual centers sequentially, limiting throughput and access to non-local physical properties. Here we design and implement a multiplexed NV sensing platform that allows us to read out many single NV centers simultaneously using a low-noise camera. Using this platform, we coherently manipulate and read out the spin states of hundreds of individual NV centers in parallel, achieving comparable magnetic field sensitivity to confocal measurements. We also implement a parallelized version of spin-to-charge-conversion readout for low NV center spin state readout noise and use it to demonstrate multiplexed covariance magnetometry, in which we measure six two-point magnetic field correlators from four NV centers simultaneously. The number of correlators we can measure is limited only by the available laser power, opening the door to massively multiplexed covariance magnetometry. Our platform significantly increases the throughput and broadens the applications of nanoscale sensing using diamond quantum sensors.