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Aim: Species–area relationships (SAR) are widely utilized for estimating the species richness and its spatial turnover across various scales. Despite the prevalent characterization of SAR using the power law in many microbial community studies, its efficacy remains unvalidated. This study aims to characterize the microbial SAR and its mechanisms in alpine grassland soils on the Qinghai‐Tibet Plateau (QTP). Location: Qinghai‐Tibet Plateau, China. Time Period: August 2014. Major Taxa Studied: Soil bacteria. Methods: Soil samples were collected from five alpine grassland sites on the QTP. Employing a nested sampling strategy at each site, soil samples were collected in plot sizes ranging from 0.5 × 0.5 m2 to 2048 × 2048 m2. Soil bacterial communities were analysed by sequencing 16S ribosomal RNA gene amplicons using an Illumina MiSeq. Results: The bacterial SAR exhibited a logarithmic power law (R2: 0.952–0.999), outperforming the power law (R2: 0.701–0.852). Consequently, the most widely adopted power law led to an overestimation of species richness by up to 15.07% in areas >256 × 256 m2, and the regional maximum theoretical richness based on Chao1 by up to 9.88%. Mechanistically, the passive sampling hypothesis was refuted through the rarefied species richness analysis, and the disproportionate effect hypothesis was rejected based on analyses of the effective numbers of species number conversions for the probability of interspecific encounters (SPIE). Notably, Pearson and multiple linear regression analyses indicated that the spatial turnover of bacterial richness was determined by the environmental heterogeneity (R2: 0.855–0.999), rather or better than environmental variables themselves, supporting the 'environment heterogeneity hypothesis'. Main Conclusions: Soil bacterial SAR in alpine grasslands exhibited a logarithmic power relationship. Spatial turnover was primarily governed by the environmental heterogeneity. In contrast, the traditional power law leads to an overestimation of soil bacterial diversity at the regional scale. [ABSTRACT FROM AUTHOR]

Revealing the mechanisms underlying soil microbial community assembly is a fundamental objective in molecular ecology. However, despite increasing body of research on overall microbial community assembly mechanisms, our understanding of subcommunity assembly mechanisms for different prokaryotic and fungal taxa remains limited. Here, soils were collected from more than 100 sites across southwestern China. Based on amplicon high‐throughput sequencing and iCAMP analysis, we determined the subcommunity assembly mechanisms for various microbial taxa. The results showed that dispersal limitation and homogenous selection were the primary drivers of soil microbial community assembly in this region. However, the subcommunity assembly mechanisms of different soil microbial taxa were highly variable. For instance, the contribution of homogenous selection to Crenarchaeota subcommunity assembly was 70%, but it was only around 10% for the subcommunity assembly of Actinomycetes, Gemmatimonadetes and Planctomycetes. The assembly of subcommunities including microbial taxa with higher occurrence frequencies, average relative abundance and network degrees, as well as wider niches tended to be more influenced by homogenizing dispersal and drift, but less affected by heterogeneous selection and dispersal limitation. The subcommunity assembly mechanisms also varied substantially among different functional guilds. Notably, the subcommunity assembly of diazotrophs, nitrifiers, saprotrophs and some pathogens were predominantly controlled by homogenous selection, while that of denitrifiers and fungal pathogens were mainly affected by stochastic processes such as drift. These findings provide novel insights into understanding soil microbial diversity maintenance mechanisms, and the analysis pipeline holds significant value for future research. [ABSTRACT FROM AUTHOR]

In alpine meadows, plants and soil microbes typically engage in competition for nitrogen (N) under N-deficient conditions. However, the acquisition and distribution of N among soil microbes and plants under alpine meadow degradation and climate warming induced by global climate change are still uncharacterized. In this study, we isotope labeled inorganic (NH4+-15N, NO3−-15N) and organic (glycine-15N) N in both degraded and non-degraded plots by using open-top chambers (OTC) to mimic increasing air temperatures. After 6 h, the 15N contents in soil microbes and plants were measured to investigate the effects of degradation and rising air temperature on N allocations in the ecosystems studied. Results showed that alpine meadow degradation significantly reduced soil microbial N accumulation by 52% compared to those in non-degraded plots. In non-degraded plots, warming significantly lowered the organic N levels of soil microbes by 49%, whereas in degraded ones, it reduced both NH4+-15N and NO3−-15N recovery by 80% and 45% on average but increased glycine-15N recovery by 653%. Meanwhile, warming decreased the plant recovery of NH4+-15N and NO3−-15N by 75% and 45% but increased the recovery of glycine-15N by 45% in non-degraded plots. Conversely, in degraded plots, warming markedly lowered NH4+-15N recovery by 40% but increased glycine-15N recovery by 114%. Warming mitigates the effects of alpine meadow degradation on nitrogen allocation among soil microbes and plants. In unwarmed plots, degradation significantly elevated the total 15N recovery ratio of soil microbes to plants by 60%. However, in warmed plots, the impact of degradation on this ratio was reduced. The responses of the 15N recovery ratio of soil microbes and plants to rising temperatures were closely related to alpine meadow quality. In non-degraded areas, warming enhanced the recovery ratio for NH4+-15N by 165% but reduced it for glycine-15N by 66%. Conversely, in degraded plots, warming decreased the recovery ratio for NH4+-15N by 66% but increased it for glycine-15N by 232%. This indicates that warming can increase carbon limitation for soil microbes in degraded alpine meadows, and the restoration of degraded alpine meadows should prioritize restoring carbon accumulation. [ABSTRACT FROM AUTHOR]

• Droughts increased CH 4 uptake in a wet year in the semiarid grassland. • Magnitude and pathways of drought effects on CH 4 uptake depend on seasonal timing. • Positive effects of early drought on CH 4 uptake were the least. • Plant composition regulated CH 4 uptake in response to droughts. Increasingly frequent and severe droughts are occurring in multiple seasons of a year in many dryland ecosystems, with unknown impacts on the role of drylands in cycling of methane (CH 4), a potent greenhouse gas. In particular, there is limited understanding of how drought occurring at different times within the growing season regulates biological CH 4 uptake, and how these responses are mediated by plant community composition. Here, we quantify how drought timing and plant community composition regulate CH 4 uptake in a semiarid grassland. We employ a field experiment in which droughts were imposed in early, middle, or late growing season in three different communities (two graminoids, two shrubs and their mixture), respectively. All three droughts increased CH 4 uptake, but the effect size and pathway varied with seasonal timing. Early and middle drought increased CH 4 uptake through increasing both soil pomA abundance and diffusivity resulting from reduced soil water content (SWC), while late drought increased CH 4 uptake only by reducing SWC. Overall, early drought had the least positive effects on CH 4 uptake because it excluded the least precipitation and therefore had smaller impacts on SWC. Besides, plant composition did not affect CH 4 uptake under normal environment but regulated CH 4 uptake in response to droughts due to different response of plant composition to droughts. Early and middle drought had larger positive effects on CH 4 uptake in shrub communities than the other two communities, consistent with larger reductions in SWC and larger increases in pomA abundance, respectively. In contrast, late drought had consistent effects on CH 4 uptake across three communities. Our results suggest that the magnitude and pathways of extreme drought effects on CH 4 uptake are strongly co-regulated by seasonal timing and plant composition. [ABSTRACT FROM AUTHOR]