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• Sediments in the eastern Arabian Sea are mainly derived from Indus River and Deccan Plateau. • Terrestrial sources are characterized by a clear glacial-interglacial cyclical change. • Sea level controlled orbital-scale terrestrial inputs and sources in the eastern Arabian Sea. Although the uplift of the Tibetan Plateau has led to strong land-sea interactions, the characteristics of sediment transport and their controlling factors in typical marine areas in the northern Indian Ocean since the Quaternary are not clear. This work aimed to reconstruct the pattern of change in the sources of sediments since the Marine Isotope Stage 9 (MIS 9) period and to explore the mechanism of their response to changes in the marine environment in the Arabian Sea. To this end, a comprehensive multi-indicator study of the chronology and geochemical elements was carried out in core AS05-7 from the eastern Arabian Sea. Major trace element factor analysis and rare earth element (La/Yb) N -δEu N mapping suggested that sediments in the eastern Arabian Sea were mainly derived from terrestrial inputs from the Indus River and the Deccan Plateau. The sediments showed a clear glacial-interglacial cycle of change, with the contribution of the Indus River increasing during the interglacial period and that of the Deccan Plateau increasing during the glacial period. On average, the Indus River and Deccan Plateau contributed 71 % and 29 %, respectively, to the total amount of sediment. Indicators such as mass accumulation rate and Ca/Ti showed that the inputs from the terrestrial sources showed clear glacial-interglacial characteristics, with inputs during the glacial period being higher than those during the interglacial period. The lowering of the sea level during the glacial period led to an increase in the exposed area of the shelf, the shifting of deposition centers closer to the core, an increase in the rate of mass accumulation, and an increase in riverine inputs to the sea when clastic sediments from the Deccan Plateau increased. The elevation of the sea level during the interglacial period led to the inundation of the shelf, the shifting of deposition centers away from the core, a decrease in the rate of mass accumulation, and a reduction in riverine inputs to the sea when detrital sediments from the Deccan Plateau decreased. Changes in terrestrial inputs and sources revealed the orbital-scale control of sea-level change on sedimentary processes in the Arabian Sea and provided direct evidence for the "source-sink" model of sedimentation in the tropical Indian Ocean. [ABSTRACT FROM AUTHOR]

• The Irrawaddy River and Ganges-Brahmaputra rivers are the main sediment sources of the northern Ninetyeast Ridge over the last 50 kyr. • Millennial-scale periodic changes of weathering and terrigenous input are revealed during the last glacial period. • Shift of depositional center from Bengal Fan to the continental shelf is controlled by sea level changes. The Ninetyeast Ridge is situated within the world's largest sediment "source-sink" system, which extends from the Tibetan Plateau to the Bay of Bengal (BoB). Modest and stable sedimentation rate makes it a suitable region for studying long-term land-sea interaction. Recent research has primarily focused on the northern Bengal Fan, leaving limited knowledge about sedimentary processes on the distant Ninetyeast Ridge. This study aims to address this gap by investigating sediment transport pattern and its response to climatic and environmental changes since the last glacial period, using the gravity core (CJ04–50) selected from the northern Ninetyeast Ridge. The provenance discrimination based on δEu-(Gd/Yb) N revealed that the Irrawaddy (Irr) River, along with the Ganges-Brahmaputra (G-B) Rivers, represented the primary sources of the study area. Quantitative analysis equations indicated that the contribution of the G-B Rivers decreased from the last glacial period (22%) to the Holocene period (16%), while that of the Irr River increased (from 78% to 84%). Chemical index of alteration (CIA*) values, and terrigenous input proxy indicators (Ti/Ca, Rb/Sr) were used to indicate the changes of weathering and terrigenous input over the past 50 kyr. During the last glacial period, CIA*, Ti/Ca and Rb/Sr revealed significantly millennial-scale periodic changes, including the distinct declining trend during the Last Glacial Maximum (LGM) and Heinrich 2–4 (H2-H4) periods, followed by recovery trend during subsequent warm periods. During these cold periods of LGM and H2–H4, weakened Indian monsoon condition, reduced precipitation, cold climate, and expanding ice sheets, adversely affected physical erosion and chemical weathering in the source area, and the reduced river runoff impeded sediment transport. Conversely, these environmental factors reversed during relatively warm periods. Since the Holocene, CIA*, Ti/Ca and Rb/Sr declined, which was contrast to the climate change, and the sea level changes became the dominant factor. The rapidly rising sea level submerged the main terrigenous input channel (the Swatch of No Ground) of the G-B Rivers, made the depositional center shift from the Bengal Fan to the continental shelf, causing the decline of terrigenous input and lower CIA* values. [ABSTRACT FROM AUTHOR]

• The residual sediments were concentrated in the central of the Malacca Strait, while the modern terrigenous sediments were distributed along the coastal side. • The sedimentary environment in the Malacca Strait presented residual, reworked, and modern characteristics. • The sedimentary dynamics restricted the transport of modern terrigenous sediments from the coast to the central region of the Malacca Strait. The Malacca Strait is not only a part of shelf deposition but also a crucial conduit connecting the continental shelf to the deep ocean. Here, we present the grain size characteristics of sediments in the Malacca Strait and regional hydrographic data obtained from global models to delineate its depositional configurations and further identify its sedimentary environments. The results reveal that the residual sediments are concentrated in the central region of the strait, whereas the modern terrigenous sediments are distributed along the coast of Malaysia and the broad northern region of the strait. The central region of MS, ProvinceⅠ, has the coarsest sediments with moderate sorting, indicating a residual sedimentary environment where the sands are residual paleo-river deposits. There are poorly sorted silty sands in ProvinceⅡ, which display finer mean grain size than that of ProvinceⅠ. It suggests a reworked sedimentary environment with variations of sediment sources between the southern and northern regions. It is a palimpsest of the paleo-deltaic deposits in the southern region, which have been intensely altered by modern high-energy hydrodynamic conditions. In terms of the northern part of ProvinceⅡ, it has modern reworked deposits shaped by wave, tide, and monsoon currents. The finer sediments, which correspond to the distribution of higher silt content, are supplied by the surrounding land in ProvinceⅢ indicating a modern environment primarily influenced by seasonally varying sedimentary dynamics, such as monsoon currents, well-developed eddies, and water masses. We thus propose that the depositional configurations in the Malacca Strait are confined by depositional dynamic environments, which restrict modern terrigenous sediments distributed along the coast and scarcely transported into the central region of the strait which exposes residual deposits. This study highlights the importance of both modern and relict sediments in the strait and our findings are important to better understanding modern strait sedimentary systems with high tidal-current-energy. [ABSTRACT FROM AUTHOR]

• Clay minerals are mainly derived from terrestrial sources input from the Irrawaddy River. • Solar activity controlled the weathering and sedimentation of fine-grained sediments. • Monsoon precipitation controlled the millennial supply and transport of fine-grained sediments. The uplift of the Tibetan Plateau has led to the formation of the world's largest sediment "source–sink" system in the northeastern Indian Ocean, and seafloor sediments record rich environmental and climatic information during the accumulation process, making it an ideal area to reconstruct past sedimentary processes. To reveal fine sediment provenance and climatic implications, we present a sedimentary reconstruction during the past 42 kyr based on clay mineral analyses of sediments from core ADM-159 retrieved from the central Andaman Sea. The clay minerals mainly consist of illite (I, 27%–47%) and kaolinite (K, 8%–37%) with minor smectite (S, 11%–37%) and chlorite (C, 11%–37%). Provenance analyses show that the illite-dominated clay minerals are mainly derived from terrestrial sources of detrital material input from the Irrawaddy River, indicating a primary supply of fine sediment from Myanmar terrestrial material. Considering the stable sediment provenance, S/K, S/(I+C), and the illite chemical index were chosen to reconstruct the transport pattern of the fine fraction sediment over the last 42 kyr. S/K and S/(I+C) showed relatively consistent trends over time with relatively high values at 32–25 and 15–6 ka BP, indicating a strong supply and transport capacity of fine particulate matter. In contrast, relatively low values of S/K and S/(I+C) occurred at 25–15 ka BP, indicating a relatively weak deposition process of fine sediments in the study area. The trends in S/K and S/(I+C) are roughly consistent with the variations in solar radiation. Together with the illite chemical index, these trends indicate that solar activity controlled the weathering and sedimentation of fine-grained sediments. We also found significant periodicities in our clay mineral records at 25.05 and 0.473–0.477 kyr, suggesting that the parameters of the Earth's orbit and solar radiation were potential driving mechanisms of the changes in regional climate. Moreover, monsoon precipitation triggered by the movement of the intertropical convergence zone was another important factor controlling the supply and transport of fine particulate matter in the study area, especially the weak precipitation during the last deglacial period and the relatively strong precipitation during the Holocene, so we could draw a conclusion that precipitation during these periods had significant effects on the weathering, erosion, and transport of fine particulate terrestrial materials over the last 42 kyr. [ABSTRACT FROM AUTHOR]

Background: Eukaryotic genes contain introns that are removed by the spliceosomal machinery during mRNA maturation. Introns impose a huge energetic burden on a cell; therefore, they must play an essential role in maintaining genome stability and/or regulating gene expression. Many genes (> 50%) in Plasmodium parasites contain predicted introns, including introns in 5′ and 3′ untranslated regions (UTR). However, the roles of UTR introns in the gene expression of malaria parasites remain unknown. Methods: In this study, an episomal dual-luciferase assay was developed to evaluate gene expression driven by promoters with or without a 5′UTR intron from four Plasmodium yoelii genes. To investigate the effect of the 5′UTR intron on endogenous gene expression, the pytctp gene was tagged with 3xHA at the N-terminal of the coding region, and parasites with or without the 5′UTR intron were generated using the CRISPR/Cas9 system. Results: We showed that promoters with 5′UTR introns had higher activities in driving gene expression than those without 5′UTR introns. The results were confirmed in recombinant parasites expressing an HA-tagged gene (pytctp) driven by promoter with or without 5′UTR intron. The enhancement of gene expression was intron size dependent, but not the DNA sequence, e.g. the longer the intron, the higher levels of expression. Similar results were observed when a promoter from one strain of P. yoelii was introduced into different parasite strains. Finally, the 5′UTR introns were alternatively spliced in different parasite development stages, suggesting an active mechanism employed by the parasites to regulate gene expression in various developmental stages. Conclusions: Plasmodium 5′UTR introns enhance gene expression in a size-dependent manner; the presence of alternatively spliced mRNAs in different parasite developmental stages suggests that alternative slicing of 5′UTR introns is one of the key mechanisms in regulating parasite gene expression and differentiation. [ABSTRACT FROM AUTHOR]

The long-term evolution of deep-sea turbidity current activity is closely related to climate and sea level changes; however, the impact of abrupt climate change (e.g. millennial-scale events in high northern latitudes) is poorly known. In this paper, deep-sea turbidite records in the western part of the lower Bengal Fan were identified since the Last Glacial Maximum (LGM) to investigate the effects of abrupt climate change on the development of the Earth's largest deep-sea fan. Our records show a termination of turbidite activity in the western lower fan at 16.6 ka–15.4 ka almost contemporaneous with Heinrich 1 event (a cooling stadial in high northern latitudes). The trigger of this termination in turbidite activity may have been a sharp decrease in erosion rates during a time of relatively stable sea level and rapid source-sink processes. The subsequent episodes of the Bolling/Allerod warm interstadial and Younger Dryas cold stadial and the rapid sea level rise event that followed possibly induced adjustment of turbidity current activities in the Bengal Fan, as indicated by other published records. In summary, we show that close links exist between abrupt climate changes in the high-latitude Northern Hemisphere and deep-sea turbidity current activity in the low-latitude South Asia. • Deep-sea turbidite records in the Bengal Fan since LGM were recovered. • Termination of turbidite in the western lower fan was triggered by HS1 event. • Links between high latitudes climate and low latitudes sedimentation were revealed. [ABSTRACT FROM AUTHOR]