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An ultra-sensitive multi-channel fluorescence probe for the detection of Al3+ in aqueous solution, 4-(diethylamino)salicylaldehyde nicotinoyl hydrazone (SBN), was synthesized. Interestingly, when 365 nm and 425 nm are the excitation wavelengths, SBN exhibits high selectivity and ultra-sensitive fluorescence enhancement recognition for Al3+ with emission wavelengths of 459 nm and 512 nm, respectively. At the same time, when 459 nm and 512 nm are utilized as the emission wavelengths, SBN also exhibits high selectivity and ultra-sensitive fluorescence off–on recognition for Al3+. Moreover, the presence of Al3+ can change the color of SNB solution from colorless to yellow, which enables SBN to be used as a highly selective and sensitive colorimetric probe for Al3+. The results of HRMS confirm the formation of a complex between SBN and Al3+ with a 3 : 1 binding ratio. The density functional theory (DFT) calculation indicates that the hydroxyls and the nitrogen atoms on carbon nitrogen double bonds in the three SBN molecules can form three chelating rings with one Al3+ ion in the SBN–Al3+ complex. The binding mode induces the fluorescence groups of three SBN molecules to exhibit different π–π stacking at different spatial positions, which enables the probe to exhibit fluorescence response signals of different channels. Furthermore, SBN possesses a variety of superior properties, including a short response time, good photostability, a wide pH response range, good anti-interference and low cytotoxicity. Therefore, SBN was successfully applied to dual channel fluorescence detection of Al3+ in the living GS cells of Epinephelus coioides. [ABSTRACT FROM AUTHOR]

Poly[(butylene adipate)‐co‐terephthalate] (PBAT) is currently the most widely used and versatile petroleum‐based fully biodegradable polyester, drawing extensive attention from researchers. However, the high production cost of PBAT restricts its widespread application. Currently, incorporating fillers into PBAT materials is considered the most effective approach to reduce production costs, with thermoplastic starch recognized as the optimal filler for PBAT base materials. Nevertheless, the low mechanical strength of thermoplastic starch significantly compromises the performance of PBAT base materials. In this study, thermoplastic starch with higher mechanical strength was prepared by partially substituting commonly used glycerol with a higher molecular weight sorbitol as the plasticizer. The enhanced thermoplastic starch was then used as a filler for PBAT materials, leading to the fabrication of PBAT‐based blend films with high starch content. Mechanical property tests revealed a 52.2% and 65.3% increase of tensile strength in the transverse and longitudinal directions, respectively, when sorbitol partially replaced glycerol as the plasticizer for thermoplastic starch. Scanning electron microscopy results demonstrated improved dispersion of thermoplastic starch particles in PBAT when sorbitol and glycerol were used together. Meanwhile, the thermal performance and stability of PBAT were not significantly affected by the thermoplastic starch filling. © 2024 Society of Chemical Industry. [ABSTRACT FROM AUTHOR]

Adaptive evolution following colonization can affect the impact of invasive species. The fall webworm (FWW) invaded China 40 years ago through a single introduction event involving a severe bottleneck and subsequently diverged into two genetic groups. The well‐recorded invasion history of FWW, coupled with a clear pattern of genetic divergence, provides an opportunity to investigate whether there is any sign of adaptive evolution following the invasion. Based on genome‐wide SNPs, we identified genetically separated western and eastern groups of FWW and correlated spatial variation in SNPs with geographical and climatic factors. Geographical factors explained a similar proportion of the genetic variation across all populations compared with climatic factors. However, when the two population groups were analysed separately, environmental factors explained more variation than geographical factors. SNP outliers in populations of the western group had relatively stronger response to precipitation than temperature‐related variables. Functional annotation of SNP outliers identified genes associated with insect cuticle protein potentially related to desiccation adaptation in the western group and genes associated with lipase biosynthesis potentially related to temperature adaptation in the eastern group. Our study suggests that invasive species may maintain the evolutionary potential to adapt to heterogeneous environments despite a single invasion event. The molecular data suggest that quantitative trait comparisons across environments would be worthwhile. [ABSTRACT FROM AUTHOR]

Nicotinamide adenine dinucleotide (NAD+) is a pivotal coenzyme, essential for cellular reactions, metabolism, and mitochondrial function. Depletion of kidney NAD+ levels and reduced de novo NAD+ synthesis through the tryptophan-kynurenine pathway are linked to acute kidney injury (AKI), whereas augmenting NAD+ shows promise in reducing AKI. We investigated de novo NAD+ biosynthesis using in vitro, ex vivo, and in vivo models to understand its role in AKI. Two-dimensional (2-D) cultures of human primary renal proximal tubule epithelial cells (RPTECs) and HK-2 cells showed limited de novo NAD+ synthesis, likely due to low pathway enzyme gene expression. Using three-dimensional (3-D) spheroid culture model improved the expression of tubular-specific markers and enzymes involved in de novo NAD+ synthesis. However, de novo NAD+ synthesis remained elusive in the 3-D spheroid culture, regardless of injury conditions. Further investigation revealed that 3-D cultured cells could not metabolize tryptophan (Trp) beyond kynurenine (KYN). Intriguingly, supplementation of 3-hydroxyanthranilic acid into RPTEC spheroids was readily incorporated into NAD+. In a human precision-cut kidney slice (PCKS) ex vivo model, de novo NAD+ synthesis was limited due to substantially downregulated kynurenine 3-monooxygenase (KMO), which is responsible for KYN to 3-hydroxykynurenine conversion. KMO overexpression in RPTEC 3-D spheroids successfully reinstated de novo NAD+ synthesis from Trp. In addition, in vivo study demonstrated that de novo NAD+ synthesis is intact in the kidney of the healthy adult mice. Our findings highlight disrupted tryptophan-kynurenine NAD+ synthesis in in vitro cellular models and an ex vivo kidney model, primarily attributed to KMO downregulation. NEW & NOTEWORTHY: Nicotinamide adenine dinucleotide (NAD+) is essential in regulating mitochondrial function. Reduced NAD+ synthesis through the de novo pathway is associated with acute kidney injury (AKI). Our study reveals a disruption in de novo NAD+ synthesis in proximal tubular models, but not in vivo, attributed to downregulation of enzyme kynurenine 3-monooxygenase (KMO). These findings highlight a crucial role of KMO in governing de novo NAD+ biosynthesis within the kidney, shedding light on potential AKI interventions. [ABSTRACT FROM AUTHOR]

The genome-level features are crucial genetic resources for species identification and phylogenetic analysis. Here, the complete mitochondrial genome of Aphidius colemani Viereck 1912 (Hymenoptera: Braconidae: Aphidiinae) was sequenced, determined and analyzed. The circular genome is 16,372 bp in length with an overall base composition of 38.9% for A, 46.2% for T, 6.7% for C, and 8.2% for G. The mitochondrial genome of A. colemani contained 13 protein-coding genes that initiated by the ATN codon, 22 transfer RNA genes, two ribosomal RNA genes (rRNAs), and a control region (CR). It shared the same gene arrangement patterns that occurred in two tRNA clusters of trnI-trnQ-trnM and trnW-trnC-trnY with Aphidius gifuensis. Phylogenetic analyses using Bayesian inference and Maximum-likelihood methods supported that the two species of Aphidiinae formed a clade and sister to other subfamilies of Braconidae. [ABSTRACT FROM AUTHOR]

Course‐based Undergraduate Research Experiences (CUREs) integrate active, discovery‐based learning into undergraduate curricula, adding tremendous value to Biochemistry and Molecular Biology (BMB) education. There are multiple challenges in transforming a research project into a CURE, such as the readiness of students, the time commitment of the instructor, and the productivity of the research. In this article, we report a CURE course developed and offered in the University of Massachusetts Amherst BMB Department since 2018 that addresses these challenges. Our CURE focuses on fungal effectors which are proteins secreted by a destructive pathogenic fungus Fusarium oxysporum, one of the top five most devastating plant pathogens. By studying this group of proteins, students are connected to real‐world problems and participate in the search for potential solutions. A 3‐week "standard Boot Camp" is implemented to help students familiarize themselves with all basic techniques and boost their confidence. Next, molecular cloning, a versatile technique with modularity and repeatability, is used as the bedrock of the course. Our past 5 years of experience have confirmed that we have developed a novel and feasible CURE protocol. Measurable progress documented by students who took this course includes stimulated active learning and increased career trajectory to pursue hypothesis‐based research to address societal needs. In addition, data generated through the course advance ongoing lab research. Collectively, we encourage the implementation of CURE among research‐intensive faculty to provide a more inclusive research experience to undergraduate students, an important element in predicting career success. [ABSTRACT FROM AUTHOR]

Fusarium oxysporum is a cross-kingdom pathogen. While some strains cause disseminated fusariosis and blinding corneal infections in humans, others are responsible for devastating vascular wilt diseases in plants. To better understand the distinct adaptations of F. oxysporum to animal or plant hosts, we conducted a comparative phenotypic and genetic analysis of two strains: MRL8996 (isolated from a keratitis patient) and Fol4287 (isolated from a wilted tomato [ Solanum lycopersicum ]). In vivo infection of mouse corneas and tomato plants revealed that, while both strains cause symptoms in both hosts, MRL8996 caused more severe corneal ulceration and perforation in mice, whereas Fol4287 induced more pronounced wilting symptoms in tomato. In vitro assays using abiotic stress treatments revealed that the human pathogen MRL8996 was better adapted to elevated temperatures, whereas the plant pathogen Fol4287 was more tolerant of osmotic and cell wall stresses. Both strains displayed broad resistance to antifungal treatment, with MRL8996 exhibiting the paradoxical effect of increased tolerance to higher concentrations of the antifungal caspofungin. We identified a set of accessory chromosomes (ACs) and protein-encoding genes with distinct transposon profiles and functions, respectively, between MRL8996 and Fol4287. Interestingly, ACs from both genomes also encode proteins with shared functions, such as chromatin remodeling and post-translational protein modifications. Our phenotypic assays and comparative genomics analyses lay the foundation for future studies correlating genotype with phenotype and for developing targeted antifungals for agricultural and clinical uses.

Nicotinamide adenine dinucleotide (NAD + ) is a pivotal coenzyme, essential for cellular reactions, metabolism, and mitochondrial function. Depletion of kidney NAD + levels and reduced de novo NAD + synthesis through the tryptophan-kynurenine pathway are linked to acute kidney injury (AKI), whereas augmenting NAD + shows promise in reducing AKI. We investigated de novo NAD + biosynthesis using in vitro, ex vivo, and in vivo models to understand its role in AKI. Two-dimensional (2-D) cultures of human primary renal proximal tubule epithelial cells (RPTECs) and HK-2 cells showed limited de novo NAD + synthesis, likely due to low pathway enzyme gene expression. Using three-dimensional (3-D) spheroid culture model improved the expression of tubular-specific markers and enzymes involved in de novo NAD + synthesis. However, de novo NAD + synthesis remained elusive in the 3-D spheroid culture, regardless of injury conditions. Further investigation revealed that 3-D cultured cells could not metabolize tryptophan (Trp) beyond kynurenine (KYN). Intriguingly, supplementation of 3-hydroxyanthranilic acid into RPTEC spheroids was readily incorporated into NAD + . In a human precision-cut kidney slice (PCKS) ex vivo model, de novo NAD + synthesis was limited due to substantially downregulated kynurenine 3-monooxygenase (KMO), which is responsible for KYN to 3-hydroxykynurenine conversion. KMO overexpression in RPTEC 3-D spheroids successfully reinstated de novo NAD + synthesis from Trp. In addition, in vivo study demonstrated that de novo NAD + synthesis is intact in the kidney of the healthy adult mice. Our findings highlight disrupted tryptophan-kynurenine NAD + synthesis in in vitro cellular models and an ex vivo kidney model, primarily attributed to KMO downregulation. NEW & NOTEWORTHY Nicotinamide adenine dinucleotide (NAD + ) is essential in regulating mitochondrial function. Reduced NAD + synthesis through the de novo pathway is associated with acute kidney injury (AKI). Our study reveals a disruption in de novo NAD + synthesis in proximal tubular models, but not in vivo, attributed to downregulation of enzyme kynurenine 3-monooxygenase (KMO). These findings highlight a crucial role of KMO in governing de novo NAD + biosynthesis within the kidney, shedding light on potential AKI interventions.

The genome-level features are crucial genetic resources for species identification and phylogenetic analysis. Here, the complete mitochondrial genome of Aphidius colemani Viereck 1912 (Hymenoptera: Braconidae: Aphidiinae) was sequenced, determined and analyzed. The circular genome is 16,372 bp in length with an overall base composition of 38.9% for A, 46.2% for T, 6.7% for C, and 8.2% for G. The mitochondrial genome of A. colemani contained 13 protein-coding genes that initiated by the ATN codon, 22 transfer RNA genes, two ribosomal RNA genes (rRNAs), and a control region (CR). It shared the same gene arrangement patterns that occurred in two tRNA clusters of trnI-trnQ-trnM and trnW-trnC-trnY with Aphidius gifuensis . Phylogenetic analyses using Bayesian inference and Maximum-likelihood methods supported that the two species of Aphidiinae formed a clade and sister to other subfamilies of Braconidae., Competing Interests: No potential conflict of interest was reported by the author(s)., (© 2024 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.)

A plot experiment was carried out to assess the applicability of soil conditioners on Cd-polluted acidic paddy fields. The effects of five soil conditioners[Tianxiang 1 Hao (TX1), limestone (Li), silicon fertilizer, Nuodikang (NDK), and calcium magnesium phosphate fertilizer (CaMg-P)] on Cd accumulation and transport between contaminated soil and rice plants and rice yield on the land were analyzed. The results showed that compared with that under the control, other tested methods increased soil pH by 0.41-0.68 units and decreased available Cd content in the soil by 11.2%-39.7%. The difference between Li- and NDK-treated soil available Cd reached a significant level ( P < 0.05). ② Compared with that in the blank control, the application of soil conditioner could significantly reduce the total amount of Cd in rice, and the Cd content in roots, other leaves, rachises, chaffs, and brown rice were significantly lower than those in the CK treatment ( P < 0.05). The Cd translation factor between various sites was shown as TF roots-other nodes > TF roots-first nodes > TF roots-rachises > TF roots-chaffs ≈ TF roots-flag leaves > TF roots-brown rice ), in which the TX1, Li, and CaMg-P treatments showed significant Cd reduction effects, and -1 ), in which the TX1, Li, and CaMg-P treatments showed significant Cd reduction effects, and ω (Cd) was 0.097, 0.094, and 0.134 mg·kg -1 , respectively. ③ The application of soil conditioner could increase the yield by 9.9%-35.8%, and the yield of the CaMg-P and TX1 treatments was significantly higher than that of other treatments ( P < 0.05). ④ Correlation analysis showed that the Cd content in brown rice was significantly positively correlated with available Cd content in soil, available Fe content in soil, and available phosphorus but negatively correlated with soil pH. In summary, TX1 and CaMg-P are recommended to be applied in farmland lightly polluted by the heavy metal Cd to ensure the safety of agricultural products.