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Abies alba Mill. is a prominent European tree species predominantly inhabiting cool and humid montane environments. However, paleoecological evidence reveals that during the Eemian and mid-Holocene, A. alba thrived in much warmer and drier climates. This capacity is nowadays reflected in cryptic meso- and sub-Mediterranean lowland populations. To link A. alba populations across diverse climates spanning from the Mediterranean lowlands to the Alpine timberline, we genotyped 421 specimens from Italy and Switzerland at 190 single-nucleotide polymorphisms (SNPs). Population genetic structure analyses indicate that isolated meso- and sub-Mediterranean lowland populations in Tuscany and Ticino align genetically with higher elevation populations in each region, suggesting that their capacity to thrive in warmer, drier conditions cannot be attributed to plantations with planting stock originating from different climates or to the occurrence of a single warm-adapted lineage showing a disjunct distribution, unless migration between Tuscany and Ticino stands occurred. Genotype-environment associations reveal that temperature seasonality, precipitation during critical seasons, and relative humidity are important for explaining the species' genetic variation. With genotype-environment and genotype-phenotype associations, we identified candidate adaptive genes potentially linked to climatic conditions and drought response. While certain adaptive alleles may have spread from Tuscany and Southern Italy or could be explained by a shared ancestry of Ticino and Tuscan populations, local adaptation may have occurred at specific loci. These findings underscore the importance of considering the hitherto overlooked lowland Mediterranean populations of A. alba to better understand the species' climatic niche and its potential for forest conservation and management under global warming., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2025 The Authors. Published by Elsevier B.V. All rights reserved.)

Abies alba is an important European tree species currently mostly found at cool and humid sites in the montane zone. In the past, it grew under markedly warmer and drier climates during the Eemian and mid-Holocene, and cryptic Mediterranean populations confirm the species' capacity to grow under warm, summer-dry conditions. However, it is unknown if warm-loving Mediterranean occurrences are related to specific genetic properties (e.g., subspecies or ecotypes). Investigating the genetics of cryptic warm-loving populations is crucial for a better understanding of past and future population dynamics of A. alba . We genotyped 478 A. alba samples at 174 single-nucleotide polymorphisms (SNP), covering a broad latitudinal range from Southern Italy to Switzerland while accounting for local altitudinal gradients, and combined these newly introduced genotypes with those of other European Abies populations from the literature. Population genetic structure analyses grouped the warm-loving meso- and sub-Mediterranean populations into the same genetic cluster as the mountain populations of each region. The occurrence of three genetic clusters from Northern to Southern Italy is in line with the glacial refugia history. The inferred evolutionary and demographic history suggests a northward expansion of A. alba after glaciation, as well as a trans-Adriatic gene flow between Balkan and Southern Italian populations. Collectively, the combined genotypic data from individuals across the species' range demonstrate that cryptic Mediterranean populations of A. alba align with the local and large-scale genetic structure of populations from its main range, suggesting that the species is able to thrive in a warmer and drier environmental range than hitherto anticipated. This finding implies that it is unneeded to postulate extinct subspecies or ecotypes to explain the occurrence of meso- and sub-Mediterranean Eemian or mid-Holocene silver fir forests, with important implications for future A. alba population dynamics., Competing Interests: The authors declare no conflicts of interest., (© 2025 The Author(s). Ecology and Evolution published by John Wiley & Sons Ltd.)