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Graph neural network (GNN) models play a pivotal role in numerous tasks involving graph-related data analysis. Despite their efficacy, similar to other deep learning models, GNNs are susceptible to adversarial attacks. Even minor perturbations in graph data can induce substantial alterations in model predictions. While existing research has explored various adversarial defense techniques for GNNs, the challenge of defending against adversarial attacks on real-world scale graph data remains largely unresolved. On one hand, methods reliant on graph purification and preprocessing tend to excessively emphasize local graph information, leading to sub-optimal defensive outcomes. On the other hand, approaches rooted in graph structure learning entail significant time overheads, rendering them impractical for large-scale graphs. In this paper, we propose a new defense method named Talos, which enhances the global, rather than local, homophily of graphs as a defense. Experiments show that the proposed approach notably outperforms state-of-the-art defense approaches, while imposing little computational overhead.

We introduce a novel meta-analysis framework to combine dependent tests under a general setting, and utilize it to synthesize various microbiome association tests that are calculated from the same dataset. Our development builds upon the classical meta-analysis methods of aggregating $p$-values and also a more recent general method of combining confidence distributions, but makes generalizations to handle dependent tests. The proposed framework ensures rigorous statistical guarantees, and we provide a comprehensive study and compare it with various existing dependent combination methods. Notably, we demonstrate that the widely used Cauchy combination method for dependent tests, referred to as the vanilla Cauchy combination in this article, can be viewed as a special case within our framework. Moreover, the proposed framework provides a way to address the problem when the distributional assumptions underlying the vanilla Cauchy combination are violated. Our numerical results demonstrate that ignoring the dependence among the to-be-combined components may lead to a severe size distortion phenomenon. Compared to the existing $p$-value combination methods, including the vanilla Cauchy combination method, the proposed combination framework can handle the dependence accurately and utilizes the information efficiently to construct tests with accurate size and enhanced power. The development is applied to Microbiome Association Studies, where we aggregate information from multiple existing tests using the same dataset. The combined tests harness the strengths of each individual test across a wide range of alternative spaces, %resulting in a significant enhancement of testing power across a wide range of alternative spaces, enabling more efficient and meaningful discoveries of vital microbiome associations.

This paper presents a novel method to make statistical inferences for both the model support and regression coefficients in a high-dimensional logistic regression model. Our method is based on the repro samples framework, in which we conduct statistical inference by generating artificial samples mimicking the actual data-generating process. The proposed method has two major advantages. Firstly, for model support, we introduce the first method for constructing model confidence set in a high-dimensional setting and the proposed method only requires a weak signal strength assumption. Secondly, in terms of regression coefficients, we establish confidence sets for any group of linear combinations of regression coefficients. Our simulation results demonstrate that the proposed method produces valid and small model confidence sets and achieves better coverage for regression coefficients than the state-of-the-art debiasing methods. Additionally, we analyze single-cell RNA-seq data on the immune response. Besides identifying genes previously proved as relevant in the literature, our method also discovers a significant gene that has not been studied before, revealing a potential new direction in understanding cellular immune response mechanisms.

Vibrational resonance (VR) is a nonlinear phenomenon in which the system response to a weak signal can be resonantly enhanced by applying a high-frequency modulation signal with an appropriate amplitude. The majority of VR research has focused on amplifying the amplitude or intensity of the system response to a weak signal, whereas the study of the phase information of system responses in VR remains limited. Here, we investigate the VR phenomena in both amplitude and phase quadratures of an optical field in a Kerr nonlinear cavity driven by a near-resonant weak signal and a far-detuned modulation signal. Analytical and numerical results demonstrated that the resonant enhancement in the amplitude and phase quadratures of the system response to a weak signal simultaneously occurs as the amplitude of the modulation signal is varied. There is a linear relation between the amplitude and frequency of the modulation signal for achieving an optimal VR effect. Furthermore, we generalized our study to investigate the quadrature at an arbitrary phase and determined that the VR enhancement sensitively depends on the phase. Our findings not only broaden the scope of VR research by incorporating phase information but also introduces an approach for amplifying an optical field by manipulating another optical field.