1. Crystallographic fragment screening in academic cancer drug discovery.
- Author
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Martin MP, Endicott JA, Noble MEM, and Tatum NJ
- Subjects
- Crystallography, X-Ray, Drug Discovery methods, Proteins, Drug Evaluation, Preclinical methods, Early Detection of Cancer, Neoplasms
- Abstract
Fragment-based drug discovery (FBDD) has brought several drugs to the clinic, notably to target proteins once considered to be challenging, or even undruggable. Screening in FBDD relies upon observing and/or measuring weak (millimolar-scale) binding events using biophysical techniques or crystallographic fragment screening. This latter structural approach provides no information about binding affinity but can reveal binding mode and atomic detail on protein-fragment interactions to accelerate hit-to-lead development. In recent years, high-throughput platforms have been developed at synchrotron facilities to screen thousands of fragment-soaked crystals. However, using accessible manual techniques it is possible to run informative, smaller-scale screens within an academic lab setting. This chapter describes general protocols for home laboratory-scale fragment screening, from fragment soaking through to structure solution and, where appropriate, signposts to background, protocols or alternatives elsewhere., (Copyright © 2023. Published by Elsevier Inc.)
- Published
- 2023
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