Search

Xenopus laevis survive severe dehydration during the summer months in their natural range. MicroRNA regulate translation of target mRNAs and have shown to be differentially expressed in response to dehydration in X. laevis. During dehydration, heart rate is elevated which appears to compensate for the reduced oxygen delivery capability due to increased hematocrit. We hypothesized that microRNAs would be differentially expressed in the heart to modulate gene expression levels in response to dehydration. The present study assessed changes in the microRNAome of X. laevis heart in response to severe dehydration (30% loss of body water) using microRNA-seq. We show that target genes are enriched for RNA, DNA, and transcription factor binding activities, cardiac muscle contraction, and glycolysis/gluconeogenesis. These results suggest that microRNAs contribute to gene expression reorganization in the heart in response to dehydration, putatively supporting the increased physiological demands and ATP production needs by the heart under these conditions. • Most differentially expressed microRNA are downregulated during dehydration. • Target genes are enriched for RNA, DNA, and transcription factor binding activities. • Nearly all glycolytic genes predicted to be less regulated by microRNA. [ABSTRACT FROM AUTHOR]

Marek's disease (MD) is a lymphoproliferative disease of domestic chickens caused by a cell-associated oncogenic alpha-herpesvirus, Marek's disease virus (MDV). Clinical signs of MD include bursal/thymic atrophy, neurologic disorders, and T cell lymphomas. MiRNAs play key roles in regulation of gene expression by targeting translational suppression or mRNA degradation. MDV encodes miRNAs that are associated with viral pathogenicity and oncogenesis. In this study, we performed miRNA sequencing in the bursal tissues, non-tumorous but viral-induced atrophied lymphoid organ, from control and infected MD-resistant and susceptible chickens at 21 days post infection. In addition to some known miRNAs, a minimum of 300 novel miRNAs were identified in each group that mapped to the chicken genome with no sequence homology to existing miRNAs in chicken miRbase. Comparative analysis identified 54 deferentially expressed miRNAs between the chicken lines that might shed light on underlying mechanism of bursal atrophy and resistance or susceptibility to MD. • MDV induces bursal atrophy and visceral tumors. • Comparative analysis of small RNA gene expression profiling identified more than 300 novel chicken miRNAs. • 54 differentially expressed known and novel miRNAs were identified between the control and infected chicken lines. • First report of its kind on miRNA profiling in a non-tumorous lymphoid organ that undergoes severe atrophy in MDV-infected chickens. • Complementary miRNA profiling in thymus might shed light on the role of miRNA in tumor development and lymphoid atrophy. [ABSTRACT FROM AUTHOR]