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m6A modification has been studied in tumors, but its role in host anti-tumor immune response and TAMs polarization remains unclear. The fatty acid oxidation (FAO) process of TAMs is also attracting attention. A co-culture model of colorectal cancer (CRC) cells and macrophages was used to simulate the tumor microenvironment. Expression changes of m6A demethylase genes FTO and ALKBH5 were screened. ALKBH5 was further investigated. Gain-of-function experiments were conducted to study ALKBH5's effects on macrophage M2 polarization, CRC cell viability, proliferation, migration, and more. Me-RIP and Actinomycin D assays were performed to study ALKBH5's influence on CPT1A, the FAO rate-limiting enzyme. AMP, ADP, and ATP content detection, OCR measurement, and ECAR measurement were used to explore ALKBH5's impact on macrophage FAO level. Rescue experiments validated ALKBH5's mechanistic role in macrophage M2 polarization and CRC malignant development. In co-culture, CRC cells enhance macrophage FAO and suppress m6A modification in M2 macrophages. ALKBH5 was selected as the gene for further investigation. ALKBH5 mediates CPT1A upregulation by removing m6A modification, promoting M2 macrophage polarization and facilitating CRC development. These findings indicate that ALKBH5 enhances fatty acid metabolism and M2 polarization of macrophages by upregulating CPT1A, thereby promoting CRC development. [ABSTRACT FROM AUTHOR]

MicroRNA (miR)-125a is highly expressed in T cells and regulates the functions of Treg through the IL-6-STAT3 signaling pathway. However, the role of miR-125a in regulating immune responses in intestinal mucosa of patients with inflammatory bowel diseases (IBD) is still not understood. Here we showed that miR-125a expression was decreased in PBMC and inflamed intestinal mucosa from IBD patients compared with that in healthy controls. Transduction with LV-miR-125a into IBD CD4+ T cells could significantly inhibit proinflammatory cytokine production, including IFN-γ, TNF-α and IL-17A. RNA-seq analysis of miR-125a−/− CD4+ T cells revealed enhanced genes (e.g., Stat1 , Stat3 , RORγt , Irf4 , Klf13) in T cell activation and effector pathways, while ETS-1 as its functional target promoted IBD CD4+ T cell differentiation into Th1 cells. Consistently, miR-125a−/− mice developed more severe colitis induced by TNBS compared with WT mice. Thus, our data suggest that miR-125a protects intestinal mucosa from inflammatory injury and that ETS-1 as its target participates in the pathogenesis of IBD. • miR-125a expression is decreased in inflamed mucosa and peripheral blood from IBD patients. • miR-125a inhibits Th1/Th17 cell differentiation and TNF-α production in IBD. • IL-6 and TNF-α downregulate miR-125a expression in CD4+ T cells from IBD patients. • miR-125a restrains Th1 cell differentiation and TNF-α production of CD4+ T cells by targeting ETS-1. • miR-125a deficient mice develop more severe colitis induced by TNBS. [ABSTRACT FROM AUTHOR]

[Display omitted] Inanimate motors, driven by the difference in surface tension, provide platforms for studying the physics of characteristic motion and mimicking the complex behaviors of biological systems. However, it is challenging to endow inanimate motors with high autonomy, with an emphasis on simulating the behavior of living organisms in response to external stimuli. Herein, by applying sodium chloride (NaCl) as an external stimulus, we achieve the regulation of motion mode and chemotaxis in a self-propelled camphor system. We present a comprehensive surface/interface understanding of motion bifurcation with the increase of concentration NaCl, i.e., continuous motion to no motion via oscillatory motion. The features of motions (the speed and frequency) and the mechanisms are elucidated depending on the concentrations of NaCl and sodium dodecyl sulfate (SDS). Furthermore, the characteristic motion and chemotaxis to the salt stimulus are correlated to the dynamic breaking/reforming of the surface tension balance and gradient-type distribution phenomenon triggered by dynamic camphor dissolution, surfactant adsorption /diffusion and camphor-surfactant interaction. This work sheds light on the typical motions of inanimate motors and scrutinizes the synergy between dual additives, which will boost the design of advanced self-propelled systems with nonlinear characteristic motion. [ABSTRACT FROM AUTHOR]

Vegetable cultivation in soils polluted with heavy metals, antibiotics and a high abundance of antibiotic-resistance genes (ARGs) can seriously threaten human health through the food chain. Therefore, novel techniques that not only remediate soil, but also ensure food security are urgently required. In the present study, two successive washings with 20 g L −1 of sophoroliplid solution plus ultrasonication (35 kHz) were effective in extracting 71.2% Cd, 88.2% tetracycline, 96.6% sulfadiazine, and 100% roxithromycin. Simultaneously, relative abundance of ARGs ( tet M, tet X, sul I, and sul II) was decreased to 10 −7 –10 −8 (ARG copies/16S copies). Further, lettuce cultivation in the 2nd washed soil showed significant improvement in vegetable growth indices (fresh/dry weight, root surface area, chlorophyll content and soluble protein content) and a decrease in isolate counts for antibiotic-resistant bacterial endophytes and ARG abundance in lettuce tissues. This combined cleanup strategy provides an environmentally friendly technology for ensuring vegetable security in washed soils. [ABSTRACT FROM AUTHOR]

An innovative ex situ soil washing technology was developed in this study to remediate organochlorine pesticides (OCPs) and heavy metals in a mixed contaminated site. Elevated temperature (60 °C) combined with ultrasonication (40 kHz, 20 min) at 50 mL L−1 maize oil and 45 g L−1 carboxylmethyl-β-cyclodextrin were effective in extracting pollutants from the soil. After two successive washing cycles, the removal efficiency rates for total OCPs, mirex, endosulfans, chlordanes, Cd, and Pb were approximately 94.7%, 87.2%, 98.5%, 92.3%, 91.6%, and 87.3%, respectively. Cultivation of vetiver grass and addition of nutrients for 3 months further degraded 34.7% of the residual total OCPs and partially restored the microbiological functions of the soil. This result was indicated by the significant increase in the number, biomass C, N, and functioning diversity of soil microorganisms (p < 0.05). After the treatment, the residual OCPs and heavy metals existed as very slowly desorbing fraction and residual fraction, as evaluated by Tenax extraction combined with a first-three-compartment model and sequential extraction. Moreover, the secondary environmental risk of residual pollutants in the remediated soil was at an acceptable level. The proposed combined cleanup strategy proved to be effective and environmentally friendly. [Copyright &y& Elsevier]

Acute lung injury (ALI) induced by sepsis and its complications have high morbidity and mortality rates globally. The objective of this study was to enhance our understanding of the underlying mechanism of ALI by identifying potential splicing events that are regulated in this condition. The CLP mouse model was utilized for mRNA sequencing, and the expression and splicing data were analyzed. Verification of the changes in expression and splicing induced by CLP was conducted using qPCR and RT-PCR. Our results showed that splicing-related genes were regulated, suggesting that splicing regulation may be a key mechanism in ALI. We also found that more than 2900 genes displayed alternative splicing in the lungs of mice with sepsis. Using RT-PCR, we verified that TLR4 and other genes had differential splicing isoforms in the lungs of mice with sepsis. We confirmed the presence of TLR4-s in the lungs of mice with sepsis using RNA-fluorescence in situ hybridization. Our results suggest that sepsis-induced ALI can significantly alter splicing in the lungs of mice. The list of DASGs and splicing factors is valuable for further study in the search for new treatment approaches for sepsis-induced ALI. • Splicing is a critical mechanism underlying the pathogenesis of sepsis-induced acute lung injury (ALI). • This study offers a comprehensive overview of the role of splicing in this complex and multifactorial disease. • We have identified novel splicing factors and differential alternate splicing genes associated with sepsis-induced ALI. [ABSTRACT FROM AUTHOR]

Continuous discharge of wastewater, emissions, and solid wastes from steelworks poses environmental risks to ecosystems. However, the role of keystone taxa in maintaining multifunctional stability during environmental disturbances remains poorly understood. To address this, we investigated the community diversity, assembly mechanisms, and soil multifunctionality of soils collected from within the steelworks (I), within 2.5 km radius from the steelworks (E), and from an undisturbed area (CK) in Jiangsu Province, China, via 16 S rRNA sequencing. Significant differences were found in the Chao1 and the richness indexes of the total taxa (p < 0.05), while the diversity of keystone taxa was not significant at each site (p > 0.05). The deterministic processes for total taxa were 42.9%, 61.9% and 47.7% in CK, E, and I, respectively. Steelworks stress increased the deterministicity of keystone taxa from 52.3% in CK to 61.9% in E and I soils. The average multifunctionality indices were 0.518, 0.506 and 0.513 for CK, E and I, respectively. Although the soil multifunctionality was positive correlated with α diversity of both the total and keystone taxa, the average degree of keystone taxa in functional network increased significantly (79.96 and 65.58, respectively), while the average degree of total taxa decreased (44.59 and 51.25, respectively) in the E and I. This suggests keystone taxa contribute to promoting the stability of ecosystems. With increasing disturbance, keystone taxa shift their function from basic metabolism (ribosome biogenesis) to detoxification (xenobiotics biodegradation, metabolism, and benzoate degradation). Here we show that keystone taxa are the most important factor in maintaining stable microbial communities and functions, providing new insights for mitigating pollution stress and soil health protection. [Display omitted] • Disturbance of steelworks reduces soil multifunctionality • Both total and keystone taxa diversity contribute to soil multifunctionality • Assembly processes of keystone taxa support high ecological stability • Keystone taxa rely on various metabolic pathways to maintain multifunctionality [ABSTRACT FROM AUTHOR]

The aim of this study was to isolates with antagonist activity against R. solanacearum . Thirty-two bacterial isolates were obtained from samples, and they were screened for potential antagonistic activity against R. Solanacearum. Using the agar spot method, ten out of the 21 tested bacteria showed antilisterial activity. VIH2 had the highest inhibitory effect on the growth of R. Solanacearum. Based on 16S rDNA and Biolog test analysis, the strain VIH2 was identified as Pseudomonas aeruginosa. Single-factor and Response Surface Methodology experiments were used to optimize the culture medium and conditions. This study was to explore whether the hemolysin-co-regulated protein secretion island I (HSI-I)-encoded type VI secretion system (T6SS) in Pseudomonas can be used as a biological control approach against Ralstonia solanacearum under field conditions. Bacterial competition assay showed that the HSI-I type T6SS of strain VIH2 exhibited dramatic antibacterial killing activity against R. solanacearum . The HSI-I T6SS of P. aeruginosa was regulated by the ppKA gene. We disrupted the gene ppKA in VIH2 by a single crossover to yield the VIH2 (ΔppKA) mutant. The antagonism of VIH2 was significantly decreased by ppKA gene disruption. In conclusion, our data supported the idea that HSI-I T6SS plays a crucial role in the antagonistic action of strain VIH2 against R. solanacearum . This alternative approach for antagonism against R. solanacearum might help develop attenuated strains of engineered bacteria for biological control. [ABSTRACT FROM AUTHOR]

Earthworms are important in soil bioremediation because of their capability of pollutant degradation. However, the trade-off between pollutant dissemination and degradation arising from earthworm activities remains unclear, as well as the potential biodegradation mechanism. Herein, an earthworm avoidance experiment was established to investigate Metaphire guillelmi –mediated tetracycline (TC) diffusion and degradation. The results showed that above 1600 mg kg−1 TC pollution in soil induced avoidance behaviour of earthworms (p < 0.05), below which the random worm behaviour accelerated TC diffusion by 8.2% at most (p < 0.05), resulting in elevated levels of antibiotic-resistant bacteria and genes in the soil. Nevertheless, earthworms enhanced TC degradation regardless of whether their avoidance behaviour occurred (14.6–25.8%, p < 0.05). Compared with in soil, metabolic pathways affiliated with xenobiotic degradation and metabolism in the intestines were enriched (LDA >3). Given the abundant glutathione S-transferases in the intestines and their close relationship with Δ degradation , they may play a key role in intestinal TC biodegradation. In general, earthworms had good tolerance to soil TC contamination and their impact on promoting TC degradation outweighed that accelerating TC diffusion. This work provides a comprehensive view of earthworms as a potential remediation method for TC-contaminated soil. • Earthworms accelerated tetracycline (TC) diffusion in soil. • TC diffusion increased antibiotic resistance bacteria/gene abundance in adjacent soil. • Earthworm presence enhanced TC degradation regardless of behaviour. • Glutathione S-transferases played a key role in intestinal TC degradation. • The stimulating effect of earthworms on TC degradation overweighed diffusion. [ABSTRACT FROM AUTHOR]