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The cosmic-ray ionization rate (CRIR, $\zeta_2$) is one of the key parameters controlling the formation and destruction of various molecules in molecular clouds. However, the current most commonly used CRIR tracers, such as H$_3^+$, OH$^+$, and H$_2$O$^+$, are hard to detect and require the presence of background massive stars for absorption measurements. In this work, we propose an alternative method to infer the CRIR in diffuse clouds using the abundance ratios of OH/CO and HCO$^+$/CO. We have analyzed the response of chemical abundances of CO, OH, and HCO$^+$ on various environmental parameters of the interstellar medium in diffuse clouds and found that their abundances are proportional to $\zeta_2$. Our analytic expressions give an excellent calculation of the abundance of OH for $\zeta_2$ $\leq$10$^{-15}$ s$^{-1}$, which are potentially useful for modelling chemistry in hydrodynamical simulations. The abundances of OH and HCO$^+$ were found to monotonically decrease with increasing density, while the CO abundance shows the opposite trend. With high-sensitivity absorption transitions of both CO (1--0) and (2--1) lines from ALMA, we have derived the H$_2$ number densities ($n_{\rm H_2}$) toward 4 line-of-sights (LOSs); assuming a kinetic temperature of $T_{\rm k}=50\,{\rm K}$, we find a range of (0.14$\pm$0.03--1.2$\pm$0.1)$\times$10$^2$ cm$^{-3}$}. By comparing the observed and modelled HCO$^+$/CO ratios, we find that $\zeta_2$ in our diffuse gas sample is in the { range of $1.0_{-1.0}^{+14.8}$ $\times$10$^{-16}- 2.5_{-2.4}^{+1.4}$ $\times$10$^{-15}$ s$^{-1}$. This is $\sim$2 times higher than the average value measured at higher extinction, supporting an attenuation of CRs as suggested by theoretical models., Comment: 22 pages, 9 figures, accepted by ApJ

Dense gas is the key for understanding star formation in galaxies. We present high resolution ($\sim3''$) observations of CN 2-1 and CS 5-4 as dense gas tracers toward Arp 299, a mid stage major merger of galaxies, with the Submillimeter Array (SMA). The spatial distribution of CN 2-1 and CS 5-4 are generally consistent with each other, as well as HCN 1-0 in literature. However, different line ratios of CS 5-4 and CN 2-1 are found in A, B, and C regions, with highest value in B. Dense gas fraction decreases from IC 694 (A), to NGC 3690 (B) and the overlap starburst region (C and C$'$), which indicates that circum-nuclear upcoming starburst in A and B will be more efficient than that in the overlap region of Arp 299., 6pages, 2 Figures

Peptide bonds, as the molecular bridges that connect amino acids, are crucial to the formation of proteins. Searches and studies of molecules with embedded peptide-like bonds are thus important for the understanding of protein formation in space. Here we report the first tentative detection of propionamide (C2H5CONH2), the largest peptide-like molecule detected in space toward Sagittarius B2(N1) at a position called N1E that is slightly offset from the continuum peak. A new laboratory measurements of the propionamide spectrum were carried out in the 9-461 GHz, which provide good opportunity to check directly for the transition frequencies of detected interstellar lines of propionamide. Our observing result indicates that propionamide emission comes from the warm, compact cores in Sagittarius B2, in which massive protostellars are forming. The column density of propionamide toward Sgr B2(N1E) was derived to be 1.5\times 10^{16} cm^-2, which is three fifths of that of acetamide, and one nineteenth of that of formamide. This detection suggests that large peptide-like molecules can form and survive during star-forming process and may form more complex molecules in the interstellar medium. The detection of propionamide bodes well for the presence of polypeptides, as well as other complex prebiotic molecules in the interstellar medium., 49 pages, 13 figures, accepted by ApJ

The cusp-core problem is one of the main challenges of the cold dark matter paradigm on small scales: the density of a dark matter halo is predicted to rise rapidly toward the center as rho ~ r^alpha with alpha between -1 and -1.5, while such a cuspy profile has not been clearly observed. We have carried out the spatially-resolved mapping of gas dynamics toward a nearby ultra-diffuse galaxy (UDG), AGC 242019. The derived rotation curve of dark matter is well fitted by the cuspy profile as described by the Navarro-Frenk-White model, while the cored profiles including both the pseudo-isothermal and Burkert models are excluded. The halo has alpha=-(0.90+-0.08) at the innermost radius of 0.67 kpc, Mhalo=(3.5+-1.2)E10 Msun and a small concentration of 2.0+-0.36. AGC 242019 challenges alternatives of cold dark matter by constraining the particle mass of fuzzy dark matter to be < 0.11E-22 eV or > 3.3E-22 eV , the cross section of self-interacting dark matter to be < 1.63 cm2/g, and the particle mass of warm dark matter to be > 0.23 keV, all of which are in tension with other constraints. The modified Newtonian dynamics is also inconsistent with a shallow radial acceleration relationship of AGC 242019. For the feedback scenario that transforms a cusp to a core, AGC 242019 disagrees with the stellar-to-halo-mass-ratio dependent model, but agrees with the star-formation-threshold dependent model. As a UDG, AGC 242019 is in a dwarf-size halo with weak stellar feedback, late formation time, a normal baryonic spin and low star formation efficiency (SFR/gas)., ApJ accepted, 25 pages, 17 figures

We present Atacama Large Millimeter/submillimeter Array (ALMA) and Karl G. Jansky Very Large Array (JVLA) observations of the massive infrared dark cloud NGC 6334S (also known as IRDC G350.56+0.44), located at the southwestern end of the NGC 6334 molecular cloud complex. The H$^{13}$CO$^{+}$ and the NH$_{2}$D lines covered by the ALMA observations at a $\sim$3$^{\prime\prime}$ angular resolution ($\sim$0.02 pc) reveal that the spatially unresolved non-thermal motions are predominantly subsonic and transonic, a condition analogous to that found in low-mass star-forming molecular clouds. The observed supersonic non-thermal velocity dispersions in massive star forming regions, often reported in the literature, might be significantly biased by poor spatial resolutions that broaden the observed line widths due to unresolved motions within the telescope beam. Our 3~mm continuum image resolves 49 dense cores, whose masses range from 0.17 to 14 $M_{\odot}$. The majority of them are resolved with multiple velocity components. Our analyses of these gas velocity components find an anti-correlation between the gas mass and the virial parameter. This implies that the more massive structures tend to be more gravitationally unstable. Finally, we find that the external pressure in the NGC 6334S cloud is important in confining these dense structures, and may play a role in the formation of dense cores, and subsequently, the embedded young stars., 30 pages, 10 figures, 2 tables, accepted for publication in The Astrophysical Journal

We performed a radio recombination line (RRL) survey to construct a high-mass star-forming region (HMSFR) sample in the Milky Way based on the all-sky Wide-Field Infrared Survey Explorer ($\textit{All-WISE}$) point source catalog. The survey was observed with the Shanghai 65m Tianma radio telescope (TMRT) covering 10 hydrogen RRL transitions ranging from H98$\alpha$ to H113$\alpha$ (corresponding to the rest frequencies of 4.5$-$6.9 GHz) simultaneously. Out of 3348 selected targets, we identified an HMSFR sample consisting of 517 sources traced by RRLs, a large fraction of this sample (486) locate near the Galactic plane ($|$$\textit{b}$$|$ $, Comment: 24 pages, 19 figures

Metals are thought to have profound effects on the internal structures of molecular clouds in which stars are born. The absence of metals is expected to prevent gas from efficient cooling and fragmentation in theory. However, this effect has not yet been observed at low metallicity environments, such as in the early Universe and local dwarf galaxies, because of the lack of high spatial resolution maps of gas. We carried out ALMA observations of the carbon monoxide (CO) J=2-1 emission line at 1.4-parsec resolutions of a molecular cloud in DDO 70 at 7% solar metallicity, the most metal-poor galaxy currently known with a CO detection. In total, five clumps have been identified and they are found to follow more or less the Larson's law. Since the CO emission exists in regions with visual extinction A_V around 1.0, we converted this A_V to the gas mass surface density using a gas-to-dust ratio of 4,594+-2,848 for DDO 70. We found that the CO clumps in DDO 70 exhibit significantly larger (on average four times) sizes than those at the same gas mass surface densities in massive star-formation regions of the Milky Way. The existence of such large clumps appears to be consistent with theoretical expectations that gas fragmentation in low metallicity clouds is suppressed. While our observation is only for one cloud in the galaxy, if it is representative, the above result implies suppressed gas fragmentation during the cloud collapse and star formation in the early Universe., Comment: ApJ in press, 8 figures

3C 397 is a radio and X-ray bright Galactic supernova remnant (SNR) with an unusual rectangular morphology. Our CO observation obtained with the Purple Mountain Observatory at Delingha reveals that the remnant is well confined in a cavity of molecular gas, and embedded at the edge of a molecular cloud (MC) at the local standard of rest systemic velocity of ~32 km/s. The cloud has a column density gradient increasing from southeast to northwest, perpendicular to the Galactic plane, in agreement with the elongation direction of the remnant. This systemic velocity places the cloud and SNR 3C 397 at a kinematic distance of ~10.3 kpc. The derived mean molecular density (~10-30 cm^-3) explains the high volume emission measure of the X-ray emitting gas. A 12CO line broadening of the ~32 km/s component is detected at the westmost boundary of the remnant, which provides direct evidence of the SNR-MC interaction and suggests multi-component gas there with dense (~10^4 cm^-3) molecular clumps. We confirm the previous detection of a MC at ~38 km/s to the west and south of the SNR and argue, based on HI self-absorption, that the cloud is located in the foreground of the remnant. A list of Galactic SNRs presently known and suggested to be in physical contact with environmental MCs is appended in this paper., Comment: ApJ in press, 11 pages, 8 figures and 2 tables. A list of Galactic SNRs in physical contact with molecular clouds is included; it is updated in Ver.3

We revisit the proposed extended Schmidt law (Shi et al. 2011) which points that the star formation efficiency in galaxies depends on the stellar mass surface density, by investigating spatially-resolved star formation rates (SFRs), gas masses and stellar masses of star formation regions in a vast range of galactic environments, from the outer disks of dwarf galaxies to spiral disks and to merging galaxies as well as individual molecular clouds in M33. We find that these regions are distributed in a tight power-law as Sigma_SFR ~(Sigma_star^0.5 Sigma_gas )^1.09, which is also valid for the integrated measurements of disk and merging galaxies at high-z. Interestingly, we show that star formation regions in the outer disks of dwarf galaxies with Sigma_SFR down to 10^(-5) Msun/yr/kpc^2, which are outliers of both Kennicutt-Schmidt and Silk-Elmegreen law, also follow the extended Schmidt law. Other outliers in the Kennicutt-Schmidt law, such as extremely-metal poor star-formation regions, also show significantly reduced deviations from the extended Schmidt law. These results suggest an important role for existing stars in helping to regulate star formation through the effect of their gravity on the mid-plane pressure in a wide range of galactic environments., Comment: 15 pages, 6 figures, 3 tables; ApJ in press

We used the Submillimeter Array (SMA) to image 860 micron continuum and CO(3-2) line emission in the ultraluminous merging galaxy Arp 220, achieving a resolution of 0.23" (80 pc) for the continuum and 0.33" (120 pc) for the line. The CO emission peaks around the two merger nuclei with a velocity signature of gas rotation around each nucleus, and is also detected in a kpc-size disk encompassing the binary nucleus. The dust continuum, in contrast, is mostly from the two nuclei. The beam-averaged brightness temperature of both line and continuum emission exceeds 50 K at and around the nuclei, revealing the presence of warm molecular gas and dust. The dust emission morphologically agrees with the distribution of radio supernova features in the east nucleus, as expected when a starburst heats the nucleus. In the brighter west nucleus, however, the submillimeter dust emission is more compact than the supernova distribution. The 860 micron core, after deconvolution, has a size of 50-80 pc, consistent with recent 1.3 mm observations, and a peak brightness temperature of (0.9-1.6)x10^2 K. Its bolometric luminosity is at least 2x10^{11} Lsun and could be ~10^{12} Lsun depending on source structure and 860 micron opacity, which we estimate to be of the order of tau_{860} ~ 1 (i.e., N_{H_2} ~ 10^{25} cm^{-2}). The starbursting west nuclear disk must have in its center a dust enshrouded AGN or a very young starburst equivalent to hundreds of super star clusters. Further spatial mapping of bolometric luminosity through submillimeter imaging is a promising way to identify the heavily obscured heating sources in Arp 220 and other luminous infrared galaxies.

Carbon monoxide (CO) is one of the primary coolants of gas and an easily accessible tracer of molecular gas in spiral galaxies but it is unclear if CO plays a similar role in metal poor dwarfs. We carried out a deep observation with IRAM 30 m to search for CO emission by targeting the brightest far-IR peak in a nearby extremely metal poor galaxy, Sextans A, with 7% Solar metallicity. A weak CO J=1-0 emission is seen, which is already faint enough to place a strong constraint on the conversion factor (a_CO) from the CO luminosity to the molecular gas mass that is derived from the spatially resolved dust mass map. The a_CO is at least seven hundred times the Milky Way value. This indicates that CO emission is exceedingly weak in extremely metal poor galaxies, challenging its role as a coolant in these galaxies., Comment: 4 pages, 1 table, 4 figures. ApJL in press

We present a study of molecular outflows toward a sample of 69 luminous IRAS point sources. The sample is associated with dense molecular gas and has far-infrared luminosities ranging from 102 to 105 L☉, indicating these objects as regions likely forming high-mass stars. Mapping in the CO J = 2-1 line shows that molecular outflows are ubiquitous in these regions. Most of the outflows have masses of tens of M☉. The typical dynamical timescale of the flow, without correcting for inclination of the flow axis, is a few times 104 yr. The typical energy in the outflows is 1046 ergs, comparable to the turbulent energy in the core. Nearly half of the outflows show spatially resolved bipolar lobes. This indicates that low-mass young stars that coexist in the region are not responsible for the bipolar outflows observed. It is the more massive stars that drive the outflow. The large detection rate of outflows in the region favors an accretion process in the formation of massive stars. The maximum mass-loss rate in the wind is about 10-4 M☉ yr-1. If these outflows are driven via accretion, the accretion rate should be as high as a few times 10-4 M☉ yr-1. We compare CO outflows with images at near-infrared wavelengths from the Two Micron All Sky Survey (2MASS) archive and find that some outflows are associated with extended emission in the K band, which may be partly due to vibrationally excited H2 emission at 2.12 μm.

We present observations of the CO 2-1 and 3-2 transitions toward the merging galaxies of NGC6090 with the Submillimeter Array (SMA) (The Submillimeter Array (SMA) is a joint project between the Smithsonian Astrophysical Observatory and the Academia Sinica Institute of Astronomy and Astrophysics, and is funded by the Smithsonian Institution and the Academia Sinica.). The high resolution CO data reveal three gas concentrations. The main component is peaking in the overlap region between the two galaxies, where the near-IR a nd radio continuum emission are weak. The CO 2-1 emission from the face-on galaxy NGC6090E is somewhat stronger than that from the edge-o n galaxy NGC6090W. The CO 3-2 emission peaks in the overlap region, similar to the CO 2-1 emission . More than 50% of the CO 3-2 emission arises from the 2$''$ (1.2 kpc) area of the overlap region. There appears to be CO 3-2 emission toward the nuclear region and the north-west arm of NGC6090E, while no CO 3-2 emission is detected toward NGC6090W. Unlike the CO gas, most of the radio continuum emission comes from NGC6090E. The strong CO emission, together with the weak radio continuum emission, suggests that star formation in the overlap region has not proceeded long enoug h to produce significant numbers of supernovae which would be detectable due to their radio continuum emission., Comment: Accepted by ApJL

We present 2.5-square-degree C$_{2}$H N=1-0 and N$_2$H$^+$ J=1-0 maps of the $\rho$ Ophiuchi molecular cloud complex. These are the first large-scale maps of the $\rho$ Ophiuchi molecular cloud complex with these two tracers. The C$_{2}$H emission is spatially more extended than the N$_2$H$^+$ emission. One faint N$_2$H$^+$ clump Oph-M and one C$_{2}$H ring Oph-RingSW are identified for the first time. The observed C$_{2}$H to N$_{2}$H$^{+}$ abundance ratio ([C$_{2}$H]/[N$_{2}$H$^{+}$]) varies between 5 and 110. We modeled the C$_{2}$H and N$_2$H$^+$ abundances with 1-D chemical models which show a clear decline of [C$_2$H]/[N$_2$H$^+$] with chemical age. Such an evolutionary trend is little affected by temperatures when they are below 40 K. At high density (n$_H$ $>$ 10$^5$ cm$^{-3}$), however, the time it takes for the abundance ratio to drop at least one order of magnitude becomes less than the dynamical time (e.g., turbulence crossing time $\rm \sim$10$^5$ years). The observed [C$_2$H]/[N$_2$H$^+$] difference between L1688 and L1689 can be explained by L1688 having chemically younger gas in relatively less dense regions. The observed [C$_{2}$H]/[N$_{2}$H$^{+}$] values are the results of time evolution, accelerated at higher densities. For the relative low density regions in L1688 where only C$_2$H emission was detected, the gas should be chemically younger., Comment: Accepted by ApJ, 45 pages, 10 figures

Using the Effelsberg-100 m telescope, we perform a successful pilot survey on H2O maser emission toward a small sample of radio-bright Seyfert 2 galaxies with a redshift larger than 0.04. The targets were selected from a large Seyfert 2 sample derived from the spectroscopic Sloan Digital Sky Survey Data Release 7 (SDSS-DR7). One source, SDSS J102802.9+104630.4 (z ~ 0.0448), was detected four times during our observations, with a typical maser flux density of ~30 mJy and a corresponding (very large) luminosity of ~1135 L ⊙. The successful detection of this radio-bright Seyfert 2 and an additional tentative detection support our previous statistical results that H2O megamasers tend to arise from Seyfert 2 galaxies with large radio luminosity. The finding provides further motivation for an upcoming larger H2O megamaser survey toward Seyfert 2s with particularly radio-bright nuclei with the basic goal to improve our understanding of the nuclear environment of active megamaser host galaxies.

We present CO?J = 2-1 observations toward 32 nearby gas-rich star-forming galaxies selected from the ALFALFA and Wide-field Infrared Survey Explorer (WISE) catalogs, using the Sub-millimeter Telescope (SMT). Our sample is selected to be dominated by intermediate-M * galaxies. The scaling relations between molecular gas, atomic gas, and galactic properties (stellar mass, NUV?? r, and WISE color W3???W2) are examined and discussed. Our results show the following. (1) In the galaxies with stellar mass M * ?1010 M ?, the H I fraction (f H I ? M H I /M *) is significantly higher than that of more massive galaxies, while the H2?gas fraction ( ? /M *) remains nearly unchanged. (2) Compared to , f H I correlates better with both M * and NUV?? r. (3) A new parameter, WISE color W3???W2 (12-4.6 ?m), is introduced, which is similar to NUV?? r in tracing star formation activity, and we find that W3???W2 has a tighter anti-correlation with log than the anti-correlation of (NUV?? r)-f H I , (NUV?? r)-, and (W3???W2)-f H I . This indicates that W3???W2 can trace the H2?fraction in galaxies. For the gas ratio /M H I ?, only in the intermediate-M * galaxies it appears to depend on M * and NUV?? r. We find a tight correlation between the molecular gas mass ?and 12 ?m (W3) luminosities (L 12 ?m), and the slope is close to unity (1.03 ? 0.06) for the SMT sample. This correlation may reflect that the cold gas and dust are well mixed on a global galactic scale. Using the all-sky 12 ?m (W3) data available in WISE, this correlation can be used to estimate CO flux for molecular gas observations and can even predict H2 mass for star-forming galaxies.

We present observations of isotopic lines of dense gas tracers toward the nuclear region of nearby Seyfert 2 galaxy NGC 1068 with the IRAM 30 m telescope and the Atacama Pathfinder Experiment (APEX) 12 m telescope. We detected four isotopic lines ((HCN)-C-13 1-0, (HCO+)-C-13 1-0, (HNC)-C-13 1-0, and (HCO+)-O-18 1-0) at the 3 mm band with the IRAM 30m telescope and obtained upper limits of other lines. We calculated optical depths of dense gas tracers with the detected isotopic lines of HCN 1-0, HCO+ 1-0, and HNC 1-0. We find that the N-14/N-15 abundance ratio is greater than 420 if we adopt the upper limit of (HCN)-N-15(1-0) emission. Combining this with fluxes of 1-0 lines from IRAM 30 m observations and the upper limit of 3-2 lines from APEX 12 m observations, we also estimated the excitation condition of molecular gas in the nuclear region of NGC 1068, which is less dense than that in the extreme starburst regions of galaxies.

We report systematic mapping observations of the NH3 (1, 1) and (2, 2) inversion lines toward 62 high-mass star-forming regions using the Very Large Array (VLA) in its D and DnC array configurations. The VLA images cover a spatial dynamic range from 40'' to 3'', allowing us to trace gas kinematics from similar to 1 pc scales to less than or similar to 0.1 pc scales. Based on the NH3 morphology and the infrared nebulosity on 1 pc scales, we categorize three subclasses in the sample: filaments, hot cores, and NH3-dispersed sources. The ubiquitous gas filaments found on 1 pc scales have a typical width of similar to 0.1 pc and often contain regularly spaced fragments along the major axis. The spacing of the fragments and the column densities is consistent with the turbulent supported fragmentation of cylinders. Several sources show multiple filaments that converge toward a center where the velocity field in the filaments is consistent with gas flows. We derive rotational temperature maps for the entire sample. For the three hot core sources, we find a projected radial temperature distribution that is best fit by power-law indices from -0.18 to -0.35. We identify 174 velocity-coherent similar to 0.1 pc scale dense cores from the entire sample. The mean physical properties for these cores are 1.1 km s(-1) in intrinsic linewidth, 18 K in NH3 rotational temperature, 2.3 x 10(15) cm(-2) in NH3 gas column density, and 67M(circle dot) in molecular mass. The dense cores identified from the filamentary sources are closer to being virialized. Dense cores in the other two categories of sources appear to be dynamically unstable.

We report HCN J=4-3, HCO+ J=4-3, and CS J=7-6 observations in 20 nearby star-forming galaxies with the Acatama Pathfinder EXperiment 12-m telescope. Combined with 4 HCN, 3 HCO+, and 4 CS detections in literature, we probe the empirical link between the luminosity of molecular gas (L_gas) and that of infrared emission (L_IR), up to the highest gas densities (10^6 - 10^8 cm-3) that have been probed so far. For nearby galaxies with large radii, we measure the IR luminosity within the submm beam-size (14"-18") to match the molecular emission. We find linear slopes for L_CS76-L_IR and L_HCN43-L_IR, and a slightly super-linear slope for L_HCO+43-L_IR. The correlation of L_CS76-L_IR even extends over eight orders of luminosity magnitude down to Galactic dense cores, with a fit of log(L_IR)=1.00(\pm 0.01) \times log(L_CS76) + 4.03(\pm 0.04). Such linear correlations appear to hold for all densities >10^4 cm-3, and indicate that star formation rate is not related to free-fall time scale for dense molecular gas.

In order to study the feedback from active galactic nuclei (AGNs), we performed a survey of SiO J = 2-1 (v = 0) transition toward ten gas-rich active galaxies with the IRAM 30 m telescope. As the first survey of SiO in such galaxies, we detected SiO J = 2-1 (v = 0) emission in six galaxies above the 3 sigma level and one galaxy (NGC 3690) at the 2.7 sigma level. The detection rate is not related to the AGN type or to star formation activity. In comparison with M82, which is a pure star-forming galaxy without nuclear activity, our SiO detections could not be completely ascribed to being due to star formation activity. This suggests that the AGN feedback may be efficient in producing SiO molecules in such galaxies. Further surveys with large single-dish millimeter telescopes and interferometers are necessary for understanding the origin of SiO in galaxies with nuclear activity.

We present a ~ 1" (100 pc) resolution 12CO (3-2) map of the nearby intermediate stage interacting galaxy pair NGC 4038/9 (the Antennae galaxies) obtained with the Submillimeter Array. We find that half the CO (3-2) emission originates in the overlap region where most of the tidally induced star formation had been previously found in shorter wavelength images, with the rest being centered on each of the nuclei. The gross distribution is consistent with lower resolution single dish images, but we show for the first time the detailed distribution of the warm and dense molecular gas across this galaxy pair at resolutions comparable to the size of a typical giant molecular complex. While we find that 58% (33/57) of the spatially resolved Giant Molecular Associations (GMAs; a few x 100 pc) are located in the overlap region, only \leqq 30% spatially coincides with the optically detected star clusters, suggesting that the bulk of the CO (3-2) emission traces the regions with very recent or near future star formation activity. The spatial distribution of the CO (3-2)/CO (1-0) integrated brightness temperature ratios mainly range between 0.3 and 0.8, which suggests that on average the CO (3-2) line in the Antennae is not completely thermalized and similar to the average values of nearby spirals. A higher ratio is seen in both nuclei and the southern complexes in the overlap region. Higher radiation field associated with intense star formation can account for the nucleus of NGC 4038 and the overlap region, but the nuclear region of NGC 4039 show relatively little star formation or AGN activities and cannot be easily explained. We show kinematical evidence that the high line ratio in NGC 4039 is possibly caused by gas inflow into the counter-rotating central disk., Comment: 20 pages, 12 figures, 4 tables, accepted for publication in Astrophysical Journal