1. Electron Transfer Complexes of Cytochrome c Peroxidase from Paracoccus denitrificans Containing More than One Cytochrome.
- Author
-
Pettigrew, Graham W., Pauleta, Sofia R., Goodhew, Celia F., Cooper, Alan, Nutley, Margaret, Jumel, Kornelia, Harding, Stephen E., Costa, Cristina, Krippahl, Ludwig, Moura, Isabel, and Moura, Jose
- Subjects
- *
CHARGE exchange , *CYTOCHROME c , *PEROXIDASE , *HYDROGEN peroxide , *RESEARCH - Abstract
According to the model proposed in previous papers [Pettigrew, G. W., Prazeres, S., Costa, C., Palma, N., Krippahl, L., and Moura, J. J. (1999) The structure of an electron-transfer complex containing a cytochrome c and a peroxidase, J. Biol. Chem. 274, 11383-11389; Pettigrew, G. W., Goodhew, C. F., Cooper, A., Nutley, M., Jumel, K., and Harding, S. E. (2003) Electron transfer complexes of cytochrome c peroxidase from Paracoccus denitrificans, Biochemistry 42, 2046-2055], cytochrome c peroxidase of Paracoccus denitrificans can accommodate horse cytochrome c and Paracoccus cytochrome c[SUB550] at different sites on its molecular surface. Here we use [SUB1]H NMR spectroscopy, analytical ultracentrifugation, molecular docking simulation, and microcalorimetry to investigate whether these small cytochromes can be accommodated simultaneously in the formation of a temary complex. The pattern of perturbation of heme methyl and methionine methyl resonances in binary and ternary solutions shows that a ternary complex can be formed, and this is confirmed by the increase in the sedimentation coefficient upon addition of horse cytochrome c to a solution in which cytochrome c[SUB550] fully occupies its binding site on cytochrome c peroxidase. Docking experiments in which favored binary solutions of cytochrome c[SUB550] bound to cytochrome c peroxidase act as targets for horse cytochrome c and the reciprocal experiments in which favored binary solutions of horse cytochrome c bound to cytochrome c peroxidase act as targets for cytochrome c[SUB550] show that the enzyme can accommodate both cytochromes at the same time on adjacent sites. Microcalorimetric titrations are difficult to interpret but are consistent with a weakened binding of horse cytochrome c to a binary complex of cytochrome c peroxidase and cytochrome c[SUB550] and binding of cytochrome c[SUB550] to the cytochrome c peroxidase that is affected little by the presence of horse cytochrome c in the other site. The presence of a substantial capture surface for small cytochromes on the cytochrome c peroxidase has implications for rate enhancement mechanisms which ensure that the two electrons required for re-reduction of the enzyme after reaction with hydrogen peroxide are delivered efficiently. [ABSTRACT FROM AUTHOR]
- Published
- 2003
- Full Text
- View/download PDF