22 results on '"Bernasconi C"'
Search Results
2. Strongly Confined CsPbBr 3 Quantum Dots as Quantum Emitters and Building Blocks for Rhombic Superlattices.
- Author
-
Boehme SC, Bodnarchuk MI, Burian M, Bertolotti F, Cherniukh I, Bernasconi C, Zhu C, Erni R, Amenitsch H, Naumenko D, Andrusiv H, Semkiv N, John RA, Baldwin A, Galkowski K, Masciocchi N, Stranks SD, Rainò G, Guagliardi A, and Kovalenko MV
- Abstract
The success of the colloidal semiconductor quantum dots (QDs) field is rooted in the precise synthetic control of QD size, shape, and composition, enabling electronically well-defined functional nanomaterials that foster fundamental science and motivate diverse fields of applications. While the exploitation of the strong confinement regime has been driving commercial and scientific interest in InP or CdSe QDs, such a regime has still not been thoroughly explored and exploited for lead-halide perovskite QDs, mainly due to a so far insufficient chemical stability and size monodispersity of perovskite QDs smaller than about 7 nm. Here, we demonstrate chemically stable strongly confined 5 nm CsPbBr
3 colloidal QDs via a postsynthetic treatment employing didodecyldimethylammonium bromide ligands. The achieved high size monodispersity (7.5% ± 2.0%) and shape-uniformity enables the self-assembly of QD superlattices with exceptional long-range order, uniform thickness, an unusual rhombic packing with an obtuse angle of 104°, and narrow-band cyan emission. The enhanced chemical stability indicates the promise of strongly confined perovskite QDs for solution-processed single-photon sources, with single QDs showcasing a high single-photon purity of 73% and minimal blinking (78% "on" fraction), both at room temperature.- Published
- 2023
- Full Text
- View/download PDF
3. Room-Temperature, Highly Pure Single-Photon Sources from All-Inorganic Lead Halide Perovskite Quantum Dots.
- Author
-
Zhu C, Marczak M, Feld L, Boehme SC, Bernasconi C, Moskalenko A, Cherniukh I, Dirin D, Bodnarchuk MI, Kovalenko MV, and Rainò G
- Abstract
Attaining pure single-photon emission is key for many quantum technologies, from optical quantum computing to quantum key distribution and quantum imaging. The past 20 years have seen the development of several solid-state quantum emitters, but most of them require highly sophisticated techniques (e.g., ultrahigh vacuum growth methods and cryostats for low-temperature operation). The system complexity may be significantly reduced by employing quantum emitters capable of working at room temperature. Here, we present a systematic study across ∼170 photostable single CsPbX
3 (X: Br and I) colloidal quantum dots (QDs) of different sizes and compositions, unveiling that increasing quantum confinement is an effective strategy for maximizing single-photon purity due to the suppressed biexciton quantum yield. Leveraging the latter, we achieve 98% single-photon purity ( g(2) (0) as low as 2%) from a cavity-free, nonresonantly excited single 6.6 nm CsPbI3 QDs, showcasing the great potential of CsPbX3 QDs as room-temperature highly pure single-photon sources for quantum technologies.- Published
- 2022
- Full Text
- View/download PDF
4. Highly Concentrated, Zwitterionic Ligand-Capped Mn 2+ :CsPb(Br x Cl 1- x ) 3 Nanocrystals as Bright Scintillators for Fast Neutron Imaging.
- Author
-
Montanarella F, McCall KM, Sakhatskyi K, Yakunin S, Trtik P, Bernasconi C, Cherniukh I, Mannes D, Bodnarchuk MI, Strobl M, Walfort B, and Kovalenko MV
- Abstract
Fast neutron imaging is a nondestructive technique for large-scale objects such as nuclear fuel rods. However, present detectors are based on conventional phosphors (typically microcrystalline ZnS:Cu) that have intrinsic drawbacks, including light scattering, γ-ray sensitivity, and afterglow. Fast neutron imaging with colloidal nanocrystals (NCs) was demonstrated to eliminate light scattering. While lead halide perovskite (LHP) FAPbBr
3 NCs emitting brightly showed poor spatial resolution due to reabsorption, the Mn2+ -doped CsPb(BrCl)3 NCs with oleyl ligands had higher resolution because of large apparent Stokes shift but insufficient concentration for high light yield. In this work, we demonstrate a NC scintillator that features simultaneously high quantum yields, high concentrations, and a large apparent Stokes shift. In particular, we use long-chain zwitterionic ligand capping in the synthesis of Mn2+ -doped CsPb(BrCl)3 NCs that allows for attaining very high concentrations (>100 mg/mL) of colloids. The emissive behavior of these ASC18-capped NCs was carefully controlled by compositional tuning that permitted us to select for high quantum yields (>50%) coinciding with Mn-dominated emission for minimal self-absorption. These tailored Mn2+ :CsPb(BrCl)3 NCs demonstrated over 8 times brighter light yield than their oleyl-capped variants under fast neutron irradiation, which is competitive with that of near-unity FAPbBr3 NCs, while essentially eliminating self-absorption. Because of their rare combination of concentrations above 100 mg/mL and high quantum yields, along with minimal self-absorption for good spatial resolution, Mn2+ :CsPb(BrCl)3 NCs have the potential to displace ZnS:Cu as the leading scintillator for fast neutron imaging., Competing Interests: The authors declare no competing financial interest., (© 2021 The Authors. Published by American Chemical Society.)- Published
- 2021
- Full Text
- View/download PDF
5. Unraveling the Origin of the Long Fluorescence Decay Component of Cesium Lead Halide Perovskite Nanocrystals.
- Author
-
Becker MA, Bernasconi C, Bodnarchuk MI, Rainò G, Kovalenko MV, Norris DJ, Mahrt RF, and Stöferle T
- Abstract
A common signature of nearly all nanoscale emitters is fluorescence intermittency, which is a rapid switching between "on"-states exhibiting a high photon emission rate and "off"-states with a much lower rate. One consequence of fluorescence intermittency occurring on time scales longer than the exciton decay time is the so-called delayed photon emission, manifested by a long radiative decay component. Besides their dominant fast radiative decay, fully inorganic cesium lead halide perovskite quantum dots exhibit a long fluorescence decay component at cryogenic temperatures that is often attributed to the decay of the dark exciton. Here, we show that its origin is delayed photon emission by investigating temporal variations in fluorescence intensity and concomitant decay times found in single CsPbBr
3 perovskite quantum dots. We attribute the different intensity levels of the intensity trace to a rapid switching between a high-intensity exciton state and an Auger-reduced low-intensity trion state that occurs when the excitation is sufficiently strong. Surprisingly, we observe that the exponent of this power-law-dependent delayed emission is correlated with the emission intensity, which cannot be explained with existing charge carrier trapping models. Our analysis reveals that the long decay component is mainly governed by delayed emission, which is present in both the exciton and trion state. The absence of a fine structure in trions clarifies the vanishing role of the dark exciton state for the long decay component. Our findings are essential for the development of a complete photophysical model that captures all observed features of fluorescence variations in colloidal nanocrystals.- Published
- 2020
- Full Text
- View/download PDF
6. Direct Synthesis of Quaternary Alkylammonium-Capped Perovskite Nanocrystals for Efficient Blue and Green Light-Emitting Diodes.
- Author
-
Shynkarenko Y, Bodnarchuk MI, Bernasconi C, Berezovska Y, Verteletskyi V, Ochsenbein ST, and Kovalenko MV
- Abstract
Cesium lead halide nanocrystals (CsPbX
3 NCs) are new inorganic light sources covering the entire visible spectral range and exhibiting near-unity efficiencies. While the last years have seen rapid progress in green and red electroluminescence from CsPbX3 NCs, the development of blue counterparts remained rather stagnant. Controlling the surface state of CsPbX3 NCs had proven to be a major factor governing the efficiency of the charge injection and for diminishing the density of traps. Although didodecyldimethylammonium halides (DDAX; X = Br, Cl) had been known to improve the luminescence of CsPbX3 NCs when applied postsynthetically, they had not been used as the sole long-chain ammonium ligand directly in the synthesis of these NCs. Herein we report a facile, direct synthesis of DDAX-stabilized CsPbX3 NCs. We then demonstrate blue and green light-emitting diodes, characterized by the electroluminescence at 463-515 nm and external quantum efficiencies of 9.80% for green, 4.96% for sky-blue, and 1.03% for deep-blue spectral regions., Competing Interests: The authors declare no competing financial interest., (Copyright © 2019 American Chemical Society.)- Published
- 2019
- Full Text
- View/download PDF
7. Underestimated Effect of a Polymer Matrix on the Light Emission of Single CsPbBr 3 Nanocrystals.
- Author
-
Rainò G, Landuyt A, Krieg F, Bernasconi C, Ochsenbein ST, Dirin DN, Bodnarchuk MI, and Kovalenko MV
- Abstract
Lead-halide perovskite APbX
3 (A = Cs or organic cation; X = Cl, Br, I) nanocrystals (NCs) are the subject of intense research due to their exceptional characteristics as both classical and quantum light sources. Many challenges often faced with this material class concern the long-term optical stability, a serious intrinsic issue connected with the labile and polar crystal structure of APbX3 compounds. When conducting spectroscopy at a single particle level, due to the highly enhanced contaminants (e.g., water molecules, oxygen) over the NC ratio, deterioration of NC optical properties occurs within tens of seconds with typically used excitation power densities (1-100 W/cm2 ) and in ambient conditions. Here, we demonstrate that choosing a suitable polymer matrix is of paramount importance for obtaining stable spectra from a single NC and for suppressing the dynamic photoluminescence blueshift. In particular, polystyrene (PS), the most hydrophobic among four tested polymers, leads to the best optical stability, one to two orders of magnitude higher than that obtained with poly(methyl methacrylate), a common polymeric encapsulant containing polar ester groups. Molecular mechanics simulations based on a force-field approximation corroborate the hypothesis that PS affords for a denser molecular packing at the NC surface. These findings underscore the often-neglected role of the sample preparation methodologies for the assessment of the optical properties of perovskite NCs at a single-particle level and guide the further design of robust single photon sources.- Published
- 2019
- Full Text
- View/download PDF
8. Unraveling the Radiative Pathways of Hot Carriers upon Intense Photoexcitation of Lead Halide Perovskite Nanocrystals.
- Author
-
Papagiorgis P, Manoli A, Michael S, Bernasconi C, Bodnarchuk MI, Kovalenko MV, Othonos A, and Itskos G
- Abstract
The slowdown of carrier cooling in lead halide perovskites (LHP) may allow the realization of efficient hot carrier solar cells. Much of the current effort focuses on the understanding of the mechanisms that retard the carrier relaxation, while proof-of-principle demonstrations of hot carrier harvesting have started to emerge. Less attention has been placed on the impact that the energy and momentum relaxation slowdown imparts on the spontaneous and stimulated light-emission process. LHP nanocrystals (NCs) provide an ideal testing ground for such studies as they exhibit bright emission and high optical gain, while the carrier cooling bottleneck is further pronounced compared to their bulk analogues due to confinement. Herein, the luminescent properties of CsPbBr
3 , FAPbBr3 , and FAPbI3 NCs in the strong photoexcitation regime are investigated. In the former two NC systems, amplified spontaneous emission is found to dominate over the radiative recombination at average carrier occupancy per nanocrystal larger than 5-10. On the other hand, under the same photoexcitation conditions in the FAPbI3 NCs, a longer lived population of hot carriers results in a competition between hot luminescence, stimulated emission, and defect recombination. The dynamic interplay between the aforementioned three emissive channels appears to be influenced by various experimental and material parameters that include temperature, material purity, film morphology, and excitation pulse width and wavelength.- Published
- 2019
- Full Text
- View/download PDF
9. Rationalizing and Controlling the Surface Structure and Electronic Passivation of Cesium Lead Halide Nanocrystals.
- Author
-
Bodnarchuk MI, Boehme SC, Ten Brinck S, Bernasconi C, Shynkarenko Y, Krieg F, Widmer R, Aeschlimann B, Günther D, Kovalenko MV, and Infante I
- Abstract
Colloidal lead halide perovskite nanocrystals (NCs) have recently emerged as versatile photonic sources. Their processing and luminescent properties are challenged by the lability of their surfaces, i.e., the interface of the NC core and the ligand shell. On the example of CsPbBr
3 NCs, we model the nanocrystal surface structure and its effect on the emergence of trap states using density functional theory. We rationalize the typical observation of a degraded luminescence upon aging or the luminescence recovery upon postsynthesis surface treatments. The conclusions are corroborated by the elemental analysis. We then propose a strategy for healing the surface trap states and for improving the colloidal stability by the combined treatment with didodecyldimethylammonium bromide and lead bromide and validate this approach experimentally. This simple procedure results in robust colloids, which are highly pure and exhibit high photoluminescence quantum yields of up to 95-98%, retained even after three to four rounds of washing., Competing Interests: The authors declare no competing financial interest.- Published
- 2019
- Full Text
- View/download PDF
10. Exploration of Near-Infrared-Emissive Colloidal Multinary Lead Halide Perovskite Nanocrystals Using an Automated Microfluidic Platform.
- Author
-
Lignos I, Morad V, Shynkarenko Y, Bernasconi C, Maceiczyk RM, Protesescu L, Bertolotti F, Kumar S, Ochsenbein ST, Masciocchi N, Guagliardi A, Shih CJ, Bodnarchuk MI, deMello AJ, and Kovalenko MV
- Abstract
Hybrid organic-inorganic and fully inorganic lead halide perovskite nanocrystals (NCs) have recently emerged as versatile solution-processable light-emitting and light-harvesting optoelectronic materials. A particularly difficult challenge lies in warranting the practical utility of such semiconductor NCs in the red and infrared spectral regions. In this context, all three archetypal A-site monocationic perovskites-CH
3 NH3 PbI3 , CH(NH2 )2 PbI3 , and CsPbI3 -suffer from either chemical or thermodynamic instabilities in their bulk form. A promising approach toward the mitigation of these challenges lies in the formation of multinary compositions (mixed cation and mixed anion). In the case of multinary colloidal NCs, such as quinary Csx FA1- x Pb(Br1- y Iy )3 NCs, the outcome of the synthesis is defined by a complex interplay between the bulk thermodynamics of the solid solutions, crystal surface energies, energetics, dynamics of capping ligands, and the multiple effects of the reagents in solution. Accordingly, the rational synthesis of such NCs is a formidable challenge. Herein, we show that droplet-based microfluidics can successfully tackle this problem and synthesize Csx FA1- x PbI3 and Csx FA1- x Pb(Br1- y Iy )3 NCs in both a time- and cost-efficient manner. Rapid in situ photoluminescence and absorption measurements allow for thorough parametric screening, thereby permitting precise optical engineering of these NCs. In this showcase study, we fine-tune the photoluminescence maxima of such multinary NCs between 700 and 800 nm, minimize their emission line widths (to below 40 nm), and maximize their photoluminescence quantum efficiencies (up to 89%) and phase/chemical stabilities. Detailed structural analysis revealed that the Csx FA1- x Pb(Br1- y Iy )3 NCs adopt a cubic perovskite structure of FAPbI3 , with iodide anions partially substituted by bromide ions. Most importantly, we demonstrate the excellent transference of reaction parameters from microfluidics to a conventional flask-based environment, thereby enabling up-scaling and further implementation in optoelectronic devices. As an example, Csx FA1- x Pb(Br1- y Iy )3 NCs with an emission maximum at 735 nm were integrated into light-emitting diodes, exhibiting a high external quantum efficiency of 5.9% and a very narrow electroluminescence spectral bandwidth of 27 nm.- Published
- 2018
- Full Text
- View/download PDF
11. Transfer of ultrasmall iron oxide nanoparticles from human brain-derived endothelial cells to human glioblastoma cells.
- Author
-
Halamoda Kenzaoui B, Angeloni S, Overstolz T, Niedermann P, Chapuis Bernasconi C, Liley M, and Juillerat-Jeanneret L
- Subjects
- Biological Transport, Cell Line, Tumor, Cell Survival drug effects, Coculture Techniques, DNA metabolism, Endothelial Cells chemistry, Endothelial Cells cytology, Ferrosoferric Oxide administration & dosage, Ferrosoferric Oxide chemistry, Glioblastoma chemistry, Humans, Magnetite Nanoparticles administration & dosage, Models, Biological, Silicon Compounds, Blood-Brain Barrier metabolism, Brain cytology, Brain metabolism, Endothelial Cells metabolism, Ferrosoferric Oxide pharmacokinetics, Glioblastoma metabolism, Magnetite Nanoparticles chemistry
- Abstract
Nanoparticles (NPs) are being used or explored for the development of biomedical applications in diagnosis and therapy, including imaging and drug delivery. Therefore, reliable tools are needed to study the behavior of NPs in biological environment, in particular the transport of NPs across biological barriers, including the blood-brain tumor barrier (BBTB), a challenging question. Previous studies have addressed the translocation of NPs of various compositions across cell layers, mostly using only one type of cells. Using a coculture model of the human BBTB, consisting in human cerebral endothelial cells preloaded with ultrasmall superparamagnetic iron oxide nanoparticles (USPIO NPs) and unloaded human glioblastoma cells grown on each side of newly developed ultrathin permeable silicon nitride supports as a model of the human BBTB, we demonstrate for the first time the transfer of USPIO NPs from human brain-derived endothelial cells to glioblastoma cells. The reduced thickness of the permeable mechanical support compares better than commercially available polymeric supports to the thickness of the basement membrane of the cerebral vascular system. These results are the first report supporting the possibility that USPIO NPs could be directly transferred from endothelial cells to glioblastoma cells across a BBTB. Thus, the use of such ultrathin porous supports provides a new in vitro approach to study the delivery of nanotherapeutics to brain cancers. Our results also suggest a novel possibility for nanoparticles to deliver therapeutics to the brain using endothelial to neural cells transfer.
- Published
- 2013
- Full Text
- View/download PDF
12. Cytotoxic effects of combination of oxidosqualene cyclase inhibitors with atorvastatin in human cancer cells.
- Author
-
Staedler D, Chapuis-Bernasconi C, Dehmlow H, Fischer H, Juillerat-Jeanneret L, and Aebi JD
- Subjects
- Alkynes chemical synthesis, Alkynes chemistry, Angiogenesis Inhibitors chemical synthesis, Angiogenesis Inhibitors chemistry, Angiogenesis Inhibitors pharmacology, Animals, Anticholesteremic Agents chemical synthesis, Anticholesteremic Agents chemistry, Antineoplastic Agents chemical synthesis, Antineoplastic Agents chemistry, Atorvastatin, Brain blood supply, Carbamates chemical synthesis, Carbamates chemistry, Cell Line, Tumor, Cell Proliferation drug effects, Cricetinae, Cyclohexanes chemical synthesis, Cyclohexanes chemistry, Drug Screening Assays, Antitumor, Drug Synergism, Endothelial Cells cytology, Endothelial Cells drug effects, Humans, Hydroxymethylglutaryl-CoA Reductase Inhibitors pharmacology, Microsomes, Liver enzymology, Neovascularization, Pathologic pathology, Structure-Activity Relationship, Alkynes pharmacology, Anticholesteremic Agents pharmacology, Antineoplastic Agents pharmacology, Carbamates pharmacology, Cyclohexanes pharmacology, Heptanoic Acids pharmacology, Intramolecular Transferases antagonists & inhibitors, Pyrroles pharmacology
- Abstract
Ten oxidosqualene cyclase inhibitors with high efficacy as cholesterol-lowering agents and of different chemical structure classes were evaluated as potential anticancer agents against human cancer cells from various tissue origins and nontumoral human-brain-derived endothelial cells. Inhibition of cancer cell growth was demonstrated at micromolar concentrations, comparable to the concentrations of statins necessary for antitumor effect. Human glioblastoma cells were among the most sensitive cells. These compounds were also able to decrease the proliferation of angiogenic brain-derived endothelial cells, as a model of tumor-induced neovasculation. Additive effects in human glioblastoma cells were also demonstrated for oxidosqualene cyclase inhibitors in combination with atorvastatin while maintaining selectivity against endothelial cells. Thus, not only statins targeting the 3-hydroxy-3-methylglutaryl coenzyme A reductase but also inhibitors of oxidosqualene cyclase decrease tumor growth, suggesting new therapeutic opportunities of combined anti-cholesterol agents for dual treatment of glioblastoma.
- Published
- 2012
- Full Text
- View/download PDF
13. Covalent cell surface functionalization of human fetal osteoblasts for tissue engineering.
- Author
-
Borcard F, Godinat A, Staedler D, Blanco HC, Dumont AL, Chapuis-Bernasconi C, Scaletta C, Applegate LA, Juillerat FK, Gonzenbach UT, Gerber-Lemaire S, and Juillerat-Jeanneret L
- Subjects
- Cell Membrane chemistry, Cell Survival, Cells, Cultured, Fetus cytology, Humans, Hydrophobic and Hydrophilic Interactions, Osteoblasts chemistry, Tissue Engineering methods, Alkynes chemistry, Click Chemistry, Membrane Proteins chemistry, Osteoblasts cytology
- Abstract
The chemical functionalization of cell-surface proteins of human primary fetal bone cells with hydrophilic bioorthogonal intermediates was investigated. Toward this goal, chemical pathways were developed for click reaction-mediated coupling of alkyne derivatives with cellular azido-expressing proteins. The incorporation via a tetraethylene glycol linker of a dipeptide and a reporter biotin allowed the proof of concept for the introduction of cell-specific peptide ligands and allowed us to follow the reaction in living cells. Tuning the conditions of the click reaction resulted in chemical functionalization of living human fetal osteoblasts with excellent cell survival.
- Published
- 2011
- Full Text
- View/download PDF
14. Physical organic chemistry of transition metal carbene complexes. 23. Kinetic and thermodynamic acidities of cationic benzothienyl- and selenylcarbene complexes of rhenium in aqueous acetonitrile.
- Author
-
Bernasconi CF and Ragains ML
- Abstract
The pK(a) values of a cationic selenyl- (5H(+)) and a benzothienylcarbene complex (6H(+)) and rate constants for the reversible deprotonation of these complexes by water, carboxylate ions, primary aliphatic amines, secondary alicyclic amines (5H(+) only), and OH(-) (5H(+) only) were determined in 50% MeCN-50% water (v/v) at 25 degrees C. In comparison with neutral Fischer-type carbene complexes such as 1H, the cationic complexes 5H(+) and 6H(+) are much more acidic, and the intrinsic barriers to proton transfer are substantially higher. This paper discusses a variety of factors that contribute to these differences, with the most important ones being that 5H(+) and 6H(+) are cationic, which makes the C(5)H(5)(NO)(PPh(3))Re moiety a stronger pi-acceptor than the (CO)(5)M moieties, coupled with the fact that the deprotonated forms of 5H(+) and 6H(+ )are aromatic molecules.
- Published
- 2001
- Full Text
- View/download PDF
15. Carbon-to-carbon identity proton transfer from allene, ketene, ketenimine, and thioketene to their respective conjugate anions in the gas phase. An ab initio study.
- Author
-
Bernasconi CF and Wenzel PJ
- Abstract
Gas-phase acidities of CH2=C=X (X = CH2, NH, O, and S) and barriers for the identity proton transfers (X=C=CH2 + HC triple bond C-X- right harpoon over left harpoon -X-C triple bond CH + CH2=C=X) as well as geometries and charge distributions of CH2=C=X, HC triple bond C-X- and the transition states of the proton transfer were determined by ab initio methods at the MP2/6-311+G(d,p)//MP2/6-311+G(d,p) and B3LYP/6-311+G(d,p) levels of theory. The acidities were also calculated at the CCSD(T)/6-311+G(2df,p) level. A major objective of this study was to examine how the enhanced unsaturation of CH2=C=X compared to that of CH3CH=X may affect acidities, transition state imbalances, and intrinsic barriers of the identity proton transfer. The results show that the acidities are all higher while the barriers are lower than for the corresponding CH3CH=X series. The transition states are all imbalanced but less so than for the reactions of CH3CH=X.
- Published
- 2001
- Full Text
- View/download PDF
16. Unraveling structure-reactivity relationships in SNV reactions: kinetics of the reactions of methoxybenzylidenemalononitrile, 2-(methylthiobenzylidene)-1,3-indandione, 2-(benzylthiobenzylidene)-1,3-indandione, and methyl beta-methylthio-alpha-nitrocinnamate with OH- and thiolate ions in aqueous DMSO.
- Author
-
Bernasconi CF, Ketner RJ, Ragains ML, Chen X, and Rappoport Z
- Abstract
The kinetics of the title reactions were determined in 50% DMSO-50% water (v/v) at 20 degrees C; n-BuS-, HOCH2CH2S-, and MeO2CCH2S- were used as thiolate ions. The reactions with the thiolate ions gave rise to two separate kinetic processes. The first refers to rapid, reversible attachment of RS- to the substrate leading to a tetrahedral intermediate (k1RS), k(-1)RS, the second to the conversion of the intermediate to products (k2RS). In most cases all of the rate constants (k1RS, k(-1)RS and k2RS could be determined. In combination with results from previous studies, a detailed discussion regarding the effects of activating substituents and leaving groups on rate and equilibrium constants as well as on intrinsic rate constants is presented. The reaction with OH- only allowed a determination of k1OH for nucleophilic attack on the substrate; in this case the tetrahedral intermediate remains at steady-state levels under all conditions.
- Published
- 2001
- Full Text
- View/download PDF
17. Ab initio study of the carbon-to-carbon identity proton transfer from ketene to its anion in the gas phase.
- Author
-
Bernasconi CF and Wenzel PJ
- Published
- 2001
- Full Text
- View/download PDF
18. Carbon-to-carbon identity proton transfers from propyne, acetimide, thioacetaldehyde, and nitrosomethane to their respective conjugate anions in the gas phase. An ab initio study.
- Author
-
Bernasconi CF and Wenzel PJ
- Abstract
Gas-phase acidities of CH3Y (Y: NO, C identical to CH, CH=NH, and CH=S), barriers to the identity proton-transfer CH3Y + CH2=Y- reversible CH2=Y- + CH3Y, as well as geometries and charge distributions of CH3Y, CH2=Y- and the transition states of the proton transfers were determined by ab initio methods at the MP2/6-311 + G(d,p)//MP2/6-311 + G(d,p), B3LYP/6-311 + G(d,p), and BPW-91/6-311 + G-(d,p) levels of theory. The acidities were also calculated at the CCSD(T)/6-311 + G(2df,2p) level. To make more meaningful comparisons, the same quantities for previously studied systems (Y: H, CH=CH2, CH=O, CN, NO2) were recalculated at the levels used in the present work. The geometric parameters as well as the group charges indicate that the transition states for all the reactions are imbalanced, although there is no correlation between the degree of imbalance and the pi-acceptor strength of the Y group. Based on multi-parameter correlations with the field (sigma F), resonance (sigma R), and polarizability effect (sigma alpha) substituent constants, the contributions of each of these effects to the acidities and barriers were evaluated. For the Y groups whose sigma F, sigma R, and sigma alpha are unknown (CH=NH, CH=S, C identical to CH), a method for estimating these substituent constants is proposed. The barriers for the CH3Y/CH2=Y- systems are all lower than for the CH4/CH3- system; this contrasts with the situation in solution where the Y groups lead to an increase in the barrier. The reasons for this reversal are analyzed. We also make an attempt to clarify the issue as to why the transition states of these reactions are imbalanced, a question which continues to draw attention in the literature.
- Published
- 2001
- Full Text
- View/download PDF
19. Kinetic dissection of individual steps in the poly(C)-directed oligoguanylate synthesis from guanosine 5'-monophosphate 2-methylimidazolide.
- Author
-
Kanavarioti A, Bernasconi CF, Alberas DJ, and Baird EE
- Subjects
- Chromatography, High Pressure Liquid, Evolution, Molecular, Guanosine Monophosphate chemistry, Monte Carlo Method, Polymers chemical synthesis, Templates, Genetic, Computer Simulation, Directed Molecular Evolution, Guanosine Monophosphate analogs & derivatives, Kinetics, Models, Chemical, Poly C chemistry
- Abstract
A kinetic study of oligoguanylate synthesis on a polycytidylate template, poly(C), as a function of the concentration of the activated monomer, guanosine 5'-monophosphate 2-methylimidazolide, 2-MeImpG, is reported. Reactions were run with 0.005-0.045 M 2-MeImpG in the presence of 0.05 M poly(C) at 23 degrees C. The kinetic results are consistent with a reaction scheme (eq 1) that consists of a series of consecutive steps, each step representing the addition of one molecule of 2-MeImpG to the growing oligomer. This scheme allows the calculation of second-order rate constants for every step by analyzing the time-dependent growth of each oligomer. Computer simulations of the course of reaction based on the determined rate constants and eq 1 are in excellent agreement with the product distributions seen in the HPLC profiles. In accord with an earlier study (Fakhrai, H.; Inoue, T.; Orgel, L. E. Tetrahedron 1984, 40, 39), rate constants, ki, for the formation of the tetramer and longer oligomers up to the 16-mer were found to be independent of length and somewhat higher than k3 (formation of trimer), which in turn is much higher than k2 (formation of dimer). The ki (i > or = 4), k3, and k2 values are not true second-order rate constants but vary with monomer concentration. Mechanistic models for the dimerization (Scheme I) and elongation reactions (Scheme II) are proposed that are consistent with our results. These models take into account that the monomer associates with the template in a cooperative manner. Our kinetic analysis allowed the determination of rate constants for the elementary processes of covalent bond formation between two monomers (dimerization) and between an oligomer and a monomer (elongation) on the template. A major conclusion from our study is that bond formation between two monomer units or between a primer and a monomer is assisted by the presence of additional next-neighbor monomer units. This is consistent with recent findings with hairpin oligonucleotides (Wu, T.; Orgel, L. E. J. Am. Chem. Soc. 1992, 114, 317). Our study is the first of its kind that shows the feasibility of a thorough kinetic analysis of a template-directed oligomerization and provides a detailed mechanistic model of these reactions.
- Published
- 1993
- Full Text
- View/download PDF
20. Nucleophilic additions to olefins. 19. Abnormally high intrinsic barrier in the reaction of piperidine and morpholine with benzylideneacetylacetone.
- Author
-
Bernasconi CF and Kanavarioti A
- Published
- 1986
- Full Text
- View/download PDF
21. Magnesium ion catalyzed P-N bond hydrolysis in imidazolide-activated nucleotides. Relevance to template-directed synthesis of polynucleotides.
- Author
-
Kanavarioti A, Bernasconi CF, Doodokyan DL, and Alberas DJ
- Subjects
- Calcium pharmacology, Catalysis, Guanosine Monophosphate analogs & derivatives, Guanosine Monophosphate chemistry, Hydrogen-Ion Concentration, Hydrolysis, Kinetics, Nitrogen chemistry, Nucleotides chemistry, Phosphorus chemistry, Templates, Genetic, Evolution, Molecular, Magnesium chemistry, Polynucleotides chemical synthesis
- Abstract
Magnesium, an ion necessary in enzymatic as well as in nonenzymatic template-directed polynucleotide-synthesizing reactions, has been found to catalyze the hydroxide ion attack on the P-N bond of selected 5'-monophosphate imidazolide derivatives of nucleotides, such as guanosine 5'-monophosphate 2-methylimidazolide (2-MeImpG), guanosine 5'-monophosphate imidazolide (ImpG), and adenosine 5-monophosphate 2-methylimidazolide (2-MeImpA). Calcium ion behaves similarly, but quantitatively the effects are smaller. Pseudo-first-order rate constants of 2-MeImpG and ImpG hydrolysis as a function of Mg2+ concentration have been obtained in the range 6 < or = pH < or = 10 at 37 degrees C. Mg2+ catalysis is particularly effective around pH 10 where a 0.02 M concentration leads to 15-fold acceleration and a 0.2 M concentration to a 115-fold acceleration of the rate. At other pH values Mg2+ catalysis is less dramatic, mainly because the noncatalyzed reaction is faster. Mg2+ catalysis is attributed to the reaction of the zwitterionic form of the substrate (SH+/-, imidazolide moiety protonated) with OH- rather than reaction of the anionic form (S-, imidazolide moiety deprotonated) with water. This conclusion is based on a study of the N-methylated substrates N-MeImpG and 1,2-diMeImpg, respectively, which were generated in situ by the equilibrium reaction of ImpG with N-methylimidazole and 2-MeImpG with 1,2-dimethylimidazole, respectively. In contrast, the absence of Mg2+ the reaction of S- with water competes with the reaction of SH+/- with OH-. The present study bears on the mechanism of the Mg2(+)-catalyzed template-directed synthesis of oligo-and polynucleotides derived from 2-MeImpG and on the competition between oligonucleotide synthesis and hydrolysis of 2-MeImpG.
- Published
- 1989
- Full Text
- View/download PDF
22. Nucleophilic addition to olefins. 15. Solvent and substituent effects on the hydrolysis of benzylidenemalononitriles in basic dimethyl sulfoxide-water solutions.
- Author
-
Bernasconi CF, Fox JP, Kanavarioti A, and Panda M
- Published
- 1986
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.