38 results on '"Poirier M"'
Search Results
2. Diverse Catalytic Reactions for the Stereoselective Synthesis of Cyclic Dinucleotide MK-1454.
- Author
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Benkovics T, Peng F, Phillips EM, An C, Bade RS, Chung CK, Dance ZEX, Fier PS, Forstater JH, Liu Z, Liu Z, Maligres PE, Marshall NM, Salehi Marzijarani N, McIntosh JA, Miller SP, Moore JC, Neel AJ, Obligacion JV, Pan W, Pirnot MT, Poirier M, Reibarkh M, Sherry BD, Song ZJ, Tan L, Turnbull BWH, Verma D, Waldman JH, Wang L, Wang T, Winston MS, and Xu F
- Subjects
- Catalysis, Biological Products chemistry
- Abstract
As practitioners of organic chemistry strive to deliver efficient syntheses of the most complex natural products and drug candidates, further innovations in synthetic strategies are required to facilitate their efficient construction. These aspirational breakthroughs often go hand-in-hand with considerable reductions in cost and environmental impact. Enzyme-catalyzed reactions have become an impressive and necessary tool that offers benefits such as increased selectivity and waste limitation. These benefits are amplified when enzymatic processes are conducted in a cascade in combination with novel bond-forming strategies. In this article, we report a highly diastereoselective synthesis of MK-1454, a potent agonist of the stimulator of interferon gene (STING) signaling pathway. The synthesis begins with the asymmetric construction of two fluoride-bearing deoxynucleotides. The routes were designed for maximum convergency and selectivity, relying on the same benign electrophilic fluorinating reagent. From these complex subunits, four enzymes are used to construct the two bridging thiophosphates in a highly selective, high yielding cascade process. Critical to the success of this reaction was a thorough understanding of the role transition metals play in bond formation.
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- 2022
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3. Development of a Robust Manufacturing Route for Molnupiravir, an Antiviral for the Treatment of COVID-19.
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Fier PS, Xu Y, Poirier M, Brito G, Zheng M, Bade R, Sirota E, Stone K, Tan L, Humphrey GR, Chang D, Bothe J, Zhang Y, Bernardoni F, Castro S, Zompa MA, Taylor J, Sirk KM, Diaz-Santana A, Diribe I, Emerson KM, Krishnamurthi B, Zhao R, Ward M, Xiao C, Ouyand H, Zhan J, and Morris WJ
- Abstract
Herein is described the development of a large-scale manufacturing process for molnupiravir, an orally dosed antiviral that was recently demonstrated to be efficacious for the treatment of patients with COVID-19. The yield, robustness, and efficiency of each of the five steps were improved, ultimately culminating in a 1.6-fold improvement in overall yield and a dramatic increase in the overall throughput compared to the baseline process., Competing Interests: The authors declare no competing financial interest., (© 2021 American Chemical Society.)
- Published
- 2021
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4. Discovery of a 3-(4-Pyrimidinyl) Indazole (MLi-2), an Orally Available and Selective Leucine-Rich Repeat Kinase 2 (LRRK2) Inhibitor that Reduces Brain Kinase Activity.
- Author
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Scott JD, DeMong DE, Greshock TJ, Basu K, Dai X, Harris J, Hruza A, Li SW, Lin SI, Liu H, Macala MK, Hu Z, Mei H, Zhang H, Walsh P, Poirier M, Shi ZC, Xiao L, Agnihotri G, Baptista MA, Columbus J, Fell MJ, Hyde LA, Kuvelkar R, Lin Y, Mirescu C, Morrow JA, Yin Z, Zhang X, Zhou X, Chang RK, Embrey MW, Sanders JM, Tiscia HE, Drolet RE, Kern JT, Sur SM, Renger JJ, Bilodeau MT, Kennedy ME, Parker EM, Stamford AW, Nargund R, McCauley JA, and Miller MW
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- Animals, Brain metabolism, Enzyme Inhibitors administration & dosage, Enzyme Inhibitors pharmacokinetics, Humans, Indazoles administration & dosage, Indazoles pharmacokinetics, Leucine-Rich Repeat Serine-Threonine Protein Kinase-2 metabolism, Male, Molecular Docking Simulation, Parkinson Disease drug therapy, Parkinson Disease enzymology, Rats, Rats, Wistar, Enzyme Inhibitors chemistry, Enzyme Inhibitors pharmacology, Indazoles chemistry, Indazoles pharmacology, Leucine-Rich Repeat Serine-Threonine Protein Kinase-2 antagonists & inhibitors
- Abstract
Leucine-rich repeat kinase 2 (LRRK2) is a large, multidomain protein which contains a kinase domain and GTPase domain among other regions. Individuals possessing gain of function mutations in the kinase domain such as the most prevalent G2019S mutation have been associated with an increased risk for the development of Parkinson's disease (PD). Given this genetic validation for inhibition of LRRK2 kinase activity as a potential means of affecting disease progression, our team set out to develop LRRK2 inhibitors to test this hypothesis. A high throughput screen of our compound collection afforded a number of promising indazole leads which were truncated in order to identify a minimum pharmacophore. Further optimization of these indazoles led to the development of MLi-2 (1): a potent, highly selective, orally available, brain-penetrant inhibitor of LRRK2.
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- 2017
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5. Solution to the C3-Arylation of Indazoles: Development of a Scalable Method.
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Basu K, Poirier M, and Ruck RT
- Abstract
3-(Hetero)arylindazoles are important motifs in several biologically active compounds. Mild and flexible palladium-mediated Negishi reaction conditions are reported for the introduction of (hetero)aryl moieties at the 3-position of N(2)-SEM-protected indazoles in high yields. The requisite Zn-species are readily obtained via regioselective deprotonation and subsequent transmetalation. The methodology tolerates a variety of functional groups on both coupling partners and has been extended to bis-haloarene and heteroarene coupling partners where the most reactive halogen reacts first, leaving the second halogen for subsequent functionalization.
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- 2016
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6. Discovery of Potent, Orally Bioavailable Inhibitors of Human Cytomegalovirus.
- Author
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Fader L, Brault M, Desjardins J, Dansereau N, Lamorte L, Tremblay S, Bilodeau F, Bordeleau J, Duplessis M, Gorys V, Gillard J, Gleason JL, James C, Joly MA, Kuhn C, Llinas-Brunet M, Luo L, Morency L, Morin S, Parisien M, Poirier M, Thibeault C, Trinh T, Sturino C, Srivastava S, Yoakim C, and Franti M
- Abstract
A high-throughput screen based on a viral replication assay was used to identify inhibitors of the human cytomegalovirus. Using this approach, hit compound 1 was identified as a 4 μM inhibitor of HCMV that was specific and selective over other herpes viruses. Time of addition studies indicated compound 1 exerted its antiviral effect early in the viral life cycle. Mechanism of action studies also revealed that this series inhibited infection of MRC-5 and ARPE19 cells by free virus and via direct cell-to-cell spread from infected to uninfected cells. Preliminary structure-activity relationships demonstrated that the potency of compound 1 could be improved to a low nanomolar level, but metabolic stability was a key optimization parameter for this series. A strategy focused on minimizing metabolic hydrolysis of the N1-amide led to an alternative scaffold in this series with improved metabolic stability and good pharmacokinetic parameters in rat.
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- 2016
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7. Molecular dynamics simulations and structure-based rational design lead to allosteric HCV NS5B polymerase thumb pocket 2 inhibitor with picomolar cellular replicon potency.
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Hucke O, Coulombe R, Bonneau P, Bertrand-Laperle M, Brochu C, Gillard J, Joly MA, Landry S, Lepage O, Llinàs-Brunet M, Pesant M, Poirier M, Poirier M, McKercher G, Marquis M, Kukolj G, Beaulieu PL, and Stammers TA
- Subjects
- Allosteric Regulation, Antiviral Agents chemistry, Cell Line, Crystallography, X-Ray, Enzyme Inhibitors chemistry, Hepacivirus enzymology, Hepacivirus genetics, Molecular Dynamics Simulation, Structure-Activity Relationship, Antiviral Agents pharmacology, Enzyme Inhibitors pharmacology, Hepacivirus drug effects, Replicon drug effects, Viral Nonstructural Proteins antagonists & inhibitors
- Abstract
The design and preliminary SAR of a new series of 1H-quinazolin-4-one (QAZ) allosteric HCV NS5B thumb pocket 2 (TP-2) inhibitors was recently reported. To support optimization efforts, a molecular dynamics (MD) based modeling workflow was implemented, providing information on QAZ binding interactions with NS5B. This approach predicted a small but critical ligand-binding induced movement of a protein backbone region which increases the pocket size and improves access to the backbone carbonyl groups of Val 494 and Pro 495. This localized backbone shift was consistent with key SAR results and was subsequently confirmed by X-ray crystallography. The MD protocol guided the design of inhibitors, exploiting novel H-bond interactions with the two backbone carbonyl groups, leading to the first thumb pocket 2 NS5B inhibitor with picomolar antiviral potency in genotype (gt) 1a and 1b replicons (EC50 = 120 and 110 pM, respectively) and with EC50 ≤ 80 nM against gt 2-6.
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- 2014
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8. Conformation-based restrictions and scaffold replacements in the design of hepatitis C virus polymerase inhibitors: discovery of deleobuvir (BI 207127).
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LaPlante SR, Bös M, Brochu C, Chabot C, Coulombe R, Gillard JR, Jakalian A, Poirier M, Rancourt J, Stammers T, Thavonekham B, Beaulieu PL, Kukolj G, and Tsantrizos YS
- Subjects
- Antiviral Agents chemistry, Benzimidazoles chemistry, Crystallography, X-Ray, Enzyme Inhibitors chemistry, Hepacivirus enzymology, Indoles chemistry, Magnetic Resonance Spectroscopy, Models, Molecular, Molecular Conformation, Antiviral Agents pharmacology, Benzimidazoles pharmacology, Drug Design, Enzyme Inhibitors pharmacology, Hepacivirus drug effects, Indoles pharmacology, Viral Nonstructural Proteins antagonists & inhibitors
- Abstract
Conformational restrictions of flexible torsion angles were used to guide the identification of new chemotypes of HCV NS5B inhibitors. Sites for rigidification were based on an acquired conformational understanding of compound binding requirements and the roles of substituents in the free and bound states. Chemical bioisosteres of amide bonds were explored to improve cell-based potency. Examples are shown, including the design concept that led to the discovery of the phase III clinical candidate deleobuvir (BI 207127). The structure-based strategies employed have general utility in drug design.
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- 2014
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9. Discovery of the first thumb pocket 1 NS5B polymerase inhibitor (BILB 1941) with demonstrated antiviral activity in patients chronically infected with genotype 1 hepatitis C virus (HCV).
- Author
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Beaulieu PL, Bös M, Cordingley MG, Chabot C, Fazal G, Garneau M, Gillard JR, Jolicoeur E, LaPlante S, McKercher G, Poirier M, Poupart MA, Tsantrizos YS, Duan J, and Kukolj G
- Subjects
- Genotype, Humans, Models, Molecular, Viral Nonstructural Proteins chemistry, Antiviral Agents pharmacology, Enzyme Inhibitors pharmacology, Viral Nonstructural Proteins antagonists & inhibitors
- Abstract
Combinations of direct acting antivirals (DAAs) that have the potential to suppress emergence of resistant virus and that can be used in interferon-sparing regimens represent a preferred option for the treatment of chronic HCV infection. We have discovered allosteric (thumb pocket 1) non-nucleoside inhibitors of HCV NS5B polymerase that inhibit replication in replicon systems. Herein, we report the late-stage optimization of indole-based inhibitors, which began with the identification of a metabolic liability common to many previously reported inhibitors in this series. By use of parallel synthesis techniques, a sparse matrix of inhibitors was generated that provided a collection of inhibitors satisfying potency criteria and displaying improved in vitro ADME profiles. "Cassette" screening for oral absorption in rat provided a short list of potential development candidates. Further evaluation led to the discovery of the first thumb pocket 1 NS5B inhibitor (BILB 1941) that demonstrated antiviral activity in patients chronically infected with genotype 1 HCV.
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- 2012
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10. Importance of ligand bioactive conformation in the discovery of potent indole-diamide inhibitors of the hepatitis C virus NS5B.
- Author
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LaPlante SR, Gillard JR, Jakalian A, Aubry N, Coulombe R, Brochu C, Tsantrizos YS, Poirier M, Kukolj G, and Beaulieu PL
- Subjects
- Allosteric Regulation, Diamide metabolism, Enzyme Inhibitors chemistry, Enzyme Inhibitors metabolism, Enzyme Inhibitors pharmacology, Inhibitory Concentration 50, Ligands, Models, Molecular, Viral Nonstructural Proteins chemistry, Viral Nonstructural Proteins metabolism, Diamide chemistry, Diamide pharmacology, Drug Discovery, Hepacivirus, Indoles chemistry, Molecular Conformation, Viral Nonstructural Proteins antagonists & inhibitors
- Abstract
Significant advances have led to receptor induced-fit and conformational selection models for describing bimolecular recognition, but a more comprehensive view must evolve to also include ligand shape and conformational changes. Here, we describe an example where a ligand's "structural hinge" influences potency by inducing an "L-shape" bioactive conformation, and due to its solvent exposure in the complex, reasonable conformation-activity-relationships can be qualitatively attributed. From a ligand design perspective, this feature was exploited by successful linker hopping to an alternate "structural hinge" that led to a new and promising chemical series which matched the ligand bioactive conformation and the pocket bioactive space. Using a combination of X-ray crystallography, NMR and modeling with support from binding-site resistance mutant studies and photoaffinity labeling experiments, we were able to derive inhibitor-polymerase complexes for various chemical series.
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- 2010
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11. Metal-free coupling of azoles with 2- and 3-haloindoles providing access to novel 2- or 3-(azol-1-yl)indole derivatives.
- Author
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Poirier M, Goudreau S, Poulin J, Savoie J, and Beaulieu PL
- Subjects
- Molecular Structure, Stereoisomerism, Azoles chemistry, Indoles chemical synthesis, Indoles chemistry
- Abstract
Thermal or microwave-mediated heating of 2- or 3-haloindoles with azoles (pK(a) < 8) provides a straightforward, metal-free, and environmentally friendly access to novel 2-(azol-1-yl)indoles. Furthermore, previously unknown 2,3-bis(azolyl-1-yl)indoles can be prepared from 2,3-dihaloindoles by sequential reaction with two distinct azoles. This operationally simple acid-catalyzed process delivers novel indole derivatives in fair to excellent yields and expands the chemical diversity of substitutions that can be introduced on this medicinally important scaffold.
- Published
- 2010
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12. Mechanism and regioselectivity of the cycloaddition of thiones derived from Meldrum's acid, malonates, or other dicarbonyls.
- Author
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Perreault S, Poirier M, Léveillé P, René O, Joly P, Dory Y, and Spino C
- Abstract
Several alpha,alpha-dioxothiones were generated in situ and reacted with 1,3-dienes of varying electronic and steric properties. It was found that thiones 10a and 11a reacted well with electron-rich or electron-poor dienes and are complementary in their regioselectivities when steric effects are at play. The calculated preferred mechanistic pathway implies a thiiranium zwitterion intermediate.
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- 2008
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13. RCM of tripeptide dienes containing a chiral vinylcyclopropane moiety: impact of different Ru-based catalysts on the stereochemical integrity of the macrocyclic products.
- Author
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Poirier M, Aubry N, Boucher C, Ferland JM, LaPlante S, and Tsantrizos YS
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- Catalysis, Magnetic Resonance Spectroscopy, Mass Spectrometry, Stereoisomerism, Oligopeptides chemistry, Propane analogs & derivatives
- Abstract
[structures: see text] Tripeptide dienes containing an (1R,2S)-vinyl aminocyclopropylcarboxylate residue were cyclized to beta-strand scaffolds under ring-closing metathesis (RCM). Conformational factors, ligand effects, and reaction conditions were evaluated. A protocol was developed for the efficient synthesis of 15-membered ring peptides in high diastereomeric purity. These peptides are key synthetic precursors to antiviral agents that target the hepatitis C virus and represent the first class of clinically validated pharmaceutical agents that are synthesized in large scale using RCM.
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- 2005
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14. A systematic approach to the optimization of substrate-based inhibitors of the hepatitis C virus NS3 protease: discovery of potent and specific tripeptide inhibitors.
- Author
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Llinàs-Brunet M, Bailey MD, Ghiro E, Gorys V, Halmos T, Poirier M, Rancourt J, and Goudreau N
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- Antiviral Agents chemistry, Antiviral Agents pharmacology, Binding Sites, Carbamates chemical synthesis, Carbamates chemistry, Carbamates pharmacology, Carrier Proteins chemistry, Cells, Cultured, Crystallography, X-Ray, Hepacivirus genetics, Humans, Hydrogen Bonding, Intracellular Signaling Peptides and Proteins, Models, Molecular, Oligopeptides chemistry, Oligopeptides pharmacology, Protein Binding, Quinolines chemistry, Quinolines pharmacology, RNA, Viral biosynthesis, Stereoisomerism, Structure-Activity Relationship, Viral Nonstructural Proteins chemistry, Viral Proteins chemistry, Antiviral Agents chemical synthesis, Oligopeptides chemical synthesis, Quinolines chemical synthesis, Viral Nonstructural Proteins antagonists & inhibitors
- Abstract
The inadequate efficacy and tolerability of current therapies for the infectious liver disease caused by the hepatitis C virus have warranted significant efforts in the development of new therapeutics. We have previously reported competitive peptide inhibitors of the NS3 serine protease based on the N-terminal cleavage products of peptide substrates. A detailed study of the interactions of these substrate-based inhibitors with the different subsites of the serine protease active site led to the discovery of novel residues that increased the affinity of the inhibitors. In this paper, we report the combination of the best binding residues in a tetrapeptide series that resulted in extremely potent inhibitors that bind exquisitely well to this enzyme. A substantial increase in potency was obtained with the simultaneous introduction of a 7-methoxy-2-phenyl-4-quinolinoxy moiety at the gamma-position of the P2 proline and a tert-leucine as a P3 residue. The increase in potency allowed for the further truncation and led to the identification of tripeptide inhibitors. Structure activity relationship studies on this inhibitor series led to the identification of carbamate-containing tripeptides that are able to inhibit replication of subgenomic HCV RNA in cell culture with potencies below 1 microM. This inhibitor series has the potential of becoming antiviral agents for the treatment of HCV infections.
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- 2004
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15. Potent inhibitors of the hepatitis C virus NS3 protease: design and synthesis of macrocyclic substrate-based beta-strand mimics.
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Goudreau N, Brochu C, Cameron DR, Duceppe JS, Faucher AM, Ferland JM, Grand-Maître C, Poirier M, Simoneau B, and Tsantrizos YS
- Subjects
- Binding Sites, Drug Design, Magnetic Resonance Spectroscopy, Mass Spectrometry, Models, Molecular, Molecular Mimicry, Protease Inhibitors chemistry, Protease Inhibitors chemical synthesis, Protease Inhibitors pharmacology, Viral Nonstructural Proteins antagonists & inhibitors
- Abstract
The virally encoded NS3 protease is essential to the life cycle of the hepatitis C virus (HCV), an important human pathogen causing chronic hepatitis, cirrhosis of the liver, and hepatocellular carcinoma. The design and synthesis of 15-membered ring beta-strand mimics which are capable of inhibiting the interactions between the HCV NS3 protease enzyme and its polyprotein substrate will be described. The binding interactions between a macrocyclic ligand and the enzyme were explored by NMR and molecular dynamics, and a model of the ligand/enzyme complex was developed.
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- 2004
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16. Synthesis of BILN 2061, an HCV NS3 protease inhibitor with proven antiviral effect in humans.
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Faucher AM, Bailey MD, Beaulieu PL, Brochu C, Duceppe JS, Ferland JM, Ghiro E, Gorys V, Halmos T, Kawai SH, Poirier M, Simoneau B, Tsantrizos YS, and Llinàs-Brunet M
- Subjects
- Antiviral Agents chemistry, Carbamates chemistry, Hepacivirus drug effects, Hepacivirus enzymology, Humans, Macrocyclic Compounds chemistry, Molecular Structure, Protease Inhibitors chemistry, Quinolines chemistry, Thiazoles chemistry, Viral Nonstructural Proteins metabolism, Antiviral Agents chemical synthesis, Antiviral Agents pharmacology, Carbamates chemical synthesis, Carbamates pharmacology, Macrocyclic Compounds chemical synthesis, Macrocyclic Compounds pharmacology, Protease Inhibitors chemical synthesis, Protease Inhibitors pharmacology, Quinolines chemical synthesis, Quinolines pharmacology, Thiazoles chemical synthesis, Thiazoles pharmacology, Viral Nonstructural Proteins antagonists & inhibitors
- Abstract
The synthesis of BILN 2061, an NS3 protease inhibitor with proven antiviral effect in humans, was accomplished in a convergent manner from four building blocks. The procedure described here was suitable for the preparation of multigram quantities of BILN 2061 for preclinical pharmacological evaluation., (Copyright 2004 American Chemical Society)
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- 2004
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17. Peptide-based inhibitors of the hepatitis C virus NS3 protease: structure-activity relationship at the C-terminal position.
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Rancourt J, Cameron DR, Gorys V, Lamarre D, Poirier M, Thibeault D, and Llinàs-Brunet M
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- Amino Acids, Cyclic chemical synthesis, Amino Acids, Cyclic chemistry, Cyclopropanes chemical synthesis, Cyclopropanes chemistry, Enzyme Inhibitors chemical synthesis, Models, Molecular, Molecular Conformation, Oligopeptides chemical synthesis, Stereoisomerism, Structure-Activity Relationship, Viral Nonstructural Proteins chemistry, Enzyme Inhibitors chemistry, Hepacivirus chemistry, Oligopeptides chemistry, Viral Nonstructural Proteins antagonists & inhibitors
- Abstract
The structure-activity relationship at the C-terminal position of peptide-based inhibitors of the hepatitis C virus NS3 protease is presented. The observation that the N-terminal cleavage product (DDIVPC-OH) of a substrate derived from the NS5A/5B cleavage site was a competitive inhibitor of the NS3 protease was previously described. The chemically unstable cysteine residue found at the P1 position of these peptide-based inhibitors could be replaced with a norvaline residue, at the expense of a substantial drop in the enzymatic activity. The fact that an aminocyclopropane carboxylic acid (ACCA) residue at the P1 position of a tetrapeptide such as 1 led to a significant gain in the inhibitory enzymatic activity, as compared to the corresponding norvaline derivative 2, prompted a systematic study of substituent effects on the three-membered ring. We report herein that the incorporation of a vinyl group with the proper configuration onto this small cycle produced inhibitors of the protease with much improved in vitro potency. The vinyl-ACCA is the first reported carboxylic acid containing a P1 residue that produced NS3 protease inhibitors that are significantly more active than inhibitors containing a cysteine at the same position.
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- 2004
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18. Structure-activity study on a novel series of macrocyclic inhibitors of the hepatitis C virus NS3 protease leading to the discovery of BILN 2061.
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Llinàs-Brunet M, Bailey MD, Bolger G, Brochu C, Faucher AM, Ferland JM, Garneau M, Ghiro E, Gorys V, Grand-Maître C, Halmos T, Lapeyre-Paquette N, Liard F, Poirier M, Rhéaume M, Tsantrizos YS, and Lamarre D
- Subjects
- Administration, Oral, Animals, Antiviral Agents chemistry, Antiviral Agents pharmacology, Biological Availability, Carbamates chemistry, Carbamates pharmacology, Heterocyclic Compounds chemistry, Heterocyclic Compounds pharmacology, Injections, Intravenous, Proline chemistry, Protease Inhibitors chemistry, Protease Inhibitors pharmacology, Rats, Structure-Activity Relationship, Antiviral Agents chemical synthesis, Carbamates chemical synthesis, Hepacivirus enzymology, Heterocyclic Compounds chemical synthesis, Protease Inhibitors chemical synthesis, Viral Nonstructural Proteins antagonists & inhibitors
- Abstract
From the discovery of competitive hexapeptide inhibitors, potent and selective HCV NS3 protease macrocyclic inhibitors have been identified. Structure-activity relationship studies were performed focusing on optimizing the N-terminal carbamate and the aromatic substituent on the (4R)-hydroxyproline moiety. Inhibitors meeting the potency criteria in the cell-based assay and with improved oral bioavailability in rats were identified. BILN 2061 was selected as the best compound, the first NS3 protease inhibitor reported with antiviral activity in man.
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- 2004
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19. NMR structural characterization of peptide inhibitors bound to the Hepatitis C virus NS3 protease: design of a new P2 substituent.
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Goudreau N, Cameron DR, Bonneau P, Gorys V, Plouffe C, Poirier M, Lamarre D, and Llinas-Brunet M
- Subjects
- Drug Design, Magnetic Resonance Spectroscopy, Models, Molecular, Oligopeptides chemistry, Proline chemistry, Protein Binding, Protein Conformation, Structure-Activity Relationship, Oligopeptides chemical synthesis, Viral Nonstructural Proteins antagonists & inhibitors
- Abstract
A comparative NMR conformational analysis of three distinct tetrapeptide inhibitors of the Hepatitis C NS3 protease that differ at the 4-aryloxy-substituted P2 proline position was undertaken. Specifically, transferred nuclear Overhauser effect experiments in combination with restrained systematic conformational searches were used to characterize the orientation of the P2 aryl substituents of these inhibitors when bound to the NS3 protease. Differences between free and bound conformations were also investigated. Analysis of the results allowed the design of a new P2 aromatic substituent, which significantly increased the potency of our inhibitors. The bound conformation of a specific competitive inhibitor having this novel P2 substituent is also described, along with a model of this inhibitor bound to the NS3 protease. This NS3 protease/inhibitor complex model also supports a hypothetical stabilization role for the P2 residue of the substrates and/or inhibitors and further elucidates the subtle details of the binding of the P2 residue of substrate-based inhibitors.
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- 2004
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20. Probing domain swapping for the neuronal SNARE complex with electron paramagnetic resonance.
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Kweon DH, Chen Y, Zhang F, Poirier M, Kim CS, and Shin YK
- Subjects
- Cyclic N-Oxides chemistry, Dimerization, Electron Spin Resonance Spectroscopy methods, Fourier Analysis, Membrane Fusion genetics, Membrane Proteins genetics, Membrane Proteins metabolism, Mutagenesis, Site-Directed, Nerve Tissue Proteins genetics, Nerve Tissue Proteins metabolism, Polymers chemistry, Polymers metabolism, Protein Structure, Secondary genetics, Protein Structure, Tertiary genetics, Recombinant Fusion Proteins chemistry, Recombinant Fusion Proteins metabolism, SNARE Proteins, Spin Labels, Synaptosomal-Associated Protein 25, Membrane Proteins chemistry, Nerve Tissue Proteins chemistry, Vesicular Transport Proteins
- Abstract
Highly conserved soluble N-ethylmaleimide sensitive factor attachment protein receptor (SNARE) proteins control membrane fusion at synapses. The target plasma membrane-associated SNARE proteins and the vesicle-associated SNARE protein assemble into a parallel four-helix bundle. Using a novel EPR approach, it is found that the SNARE four-helix bundles are interconnected via domain swapping that is achieved by substituting one of the two SNAP-25 helices with the identical helix from the second four-helical bundle. Domain swapping is likely to play a role in the multimerization of the SNARE complex that is required for successful membrane fusion. The new EPR application employed here should be useful to study other polymerizing proteins.
- Published
- 2002
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21. An anion-induced regio- and chemoselective acylation and its application to the synthesis of an anticancer agent.
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Poirier M, Chen F, Bernard C, Wong YS, and Wu GG
- Subjects
- Acylation, Cyclization, Indicators and Reagents, Ketones chemistry, Antineoplastic Agents chemical synthesis, Piperidines chemical synthesis, Pyridines chemical synthesis
- Abstract
[reaction--see text] An efficient Grignard- and organolithium-induced regio- and chemoselective anionic acylation is reported. A number of tricyclic ketones are prepared in good to excellent yields via this method. This method is complementary to the Frieldel-Crafts acylation for electron-deficient substrates. A novel anisole-based Grignard reagent was developed to effect the cyclization of sterically hindered substrates. This novel reagent has been successfully applied to the synthesis of Sch 66336, a candidate for oncologic treatment.
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- 2001
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22. Nonpeptidic, monocharged, cell permeable ligands for the p56lck SH2 domain.
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Proudfoot JR, Betageri R, Cardozo M, Gilmore TA, Glynn S, Hickey ER, Jakes S, Kabcenell A, Kirrane TM, Tibolla AK, Lukas S, Patel UR, Sharma R, Yazdanian M, Moss N, Beaulieu PL, Cameron DR, Ferland JM, Gauthier J, Gillard J, Gorys V, Poirier M, Rancourt J, Wernic D, and Llinas-Brunet M
- Subjects
- Caco-2 Cells, Calcium metabolism, Humans, Jurkat Cells, Ligands, Models, Molecular, Phenylalanine analogs & derivatives, Phenylalanine chemistry, Phenylalanine pharmacology, Pyridones chemistry, Pyridones pharmacology, Cell Membrane Permeability, Lymphocyte Specific Protein Tyrosine Kinase p56(lck) metabolism, Phenylalanine chemical synthesis, Pyridones chemical synthesis, src Homology Domains
- Abstract
p56lck is a member of the src family of tyrosine kinases and plays a critical role in the signal transduction events that lead to T cell activation. Ligands for the p56lck SH2 domain have the potential to disrupt the interaction of p56lck with its substrates and derail the signaling cascade that leads to the production of cytokines such as interleukin-2. Starting from the quintuply charged (at physiological pH) phosphorylated tetrapeptide, AcpYEEI, we recently disclosed (J. Med. Chem. 1999, 42, 722 and J. Med. Chem. 1999, 42, 1757) the design of the modified dipeptide 3, which carries just two charges at physiological pH. Here we present the elaboration of 3 to the nonpeptidic, monocharged compound, 9S. This molecule displays good binding affinity for the p56lck SH2 domain (K(d) 1 microM) and good cell permeation, and this combination of properties allowed us to demonstrate clear-cut inhibitory effects on a very early event in T cell activation, namely calcium mobilization.
- Published
- 2001
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23. Solid-phase synthesis of peptidomimetic inhibitors for the hepatitis C virus NS3 protease.
- Author
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Poupart MA, Cameron DR, Chabot C, Ghiro E, Goudreau N, Goulet S, Poirier M, and Tsantrizos YS
- Subjects
- Combinatorial Chemistry Techniques, Enzyme Inhibitors pharmacology, Humans, Molecular Mimicry, Oligopeptides chemical synthesis, Oligopeptides pharmacology, Peptide Library, Structure-Activity Relationship, Enzyme Inhibitors chemical synthesis, Viral Nonstructural Proteins antagonists & inhibitors
- Abstract
The NS3 serine protease enzyme of the hepatitis C virus (HCV) is essential for viral replication. Short peptides mimicking the N-terminal substrate cleavage products of the NS3 protease are known to act as weak inhibitors of the enzyme and have been used as templates for the design of peptidomimetic inhibitors. Automated solid-phase synthesis of a small library of compounds based on such a peptidomimetic scaffold has led to the identification of potent and highly selective inhibitors of the NS3 protease enzyme.
- Published
- 2001
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24. Novel 2,2-bipyridine ligand for palladium-catalyzed regioselective carbonylation.
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Wu GG, Wong Y, and Poirier M
- Subjects
- Antineoplastic Agents chemical synthesis, Antineoplastic Agents chemistry, Catalysis, Indicators and Reagents, Ligands, Piperidines chemical synthesis, Piperidines chemistry, Pyridines chemical synthesis, Palladium chemistry, Pyridines chemistry
- Abstract
[reaction: see text] A palladium-catalyzed highly regioselective one-step carbonylation of 2,5-dibromo-3-methylpyridine is reported. A range of alkyl esters and amides can be prepared in good yield with better than 95:5 regioselectivity via this method. Key to the high regioselectivity for the formation aromatic amides is the introduction of a novel nonphosphine-based 2,2-bipyridine ligand. This novel reaction was scaled up smoothly in the plant to a 130-kg batch size and facilitated the delivery of bulk material for the clinical trials of Sch 66336, a candidate for oncologic treatments.
- Published
- 1999
- Full Text
- View/download PDF
25. 99mTc-labeling of hydrazones of a hydrazinonicotinamide conjugated cyclic peptide.
- Author
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Edwards DS, Liu S, Harris AR, Poirier MJ, and Ewels BA
- Subjects
- Drug Stability, Glycine analogs & derivatives, Glycine chemistry, Hydrazones chemical synthesis, Hydrogen-Ion Concentration, Isotope Labeling methods, Kinetics, Niacinamide chemical synthesis, Niacinamide chemistry, Organophosphorus Compounds chemistry, Organotechnetium Compounds chemistry, Platelet Glycoprotein GPIIb-IIIa Complex antagonists & inhibitors, Radiopharmaceuticals chemistry, Sulfonic Acids chemistry, Technetium chemistry, Hydrazones chemistry, Niacinamide analogs & derivatives, Organotechnetium Compounds chemical synthesis, Peptides, Cyclic chemical synthesis, Peptides, Cyclic chemistry, Radiopharmaceuticals chemical synthesis
- Abstract
Eight HYNICtide hydrazones (three with aliphatic substituents and five with aromatic groups) were studied for their potential use as the final intermediate for preparation of RP444, a new radiopharmaceutical under development for imaging thrombosis. The goal of this study is to screen various hydrazones through stability testing and radiolabeling and find those which are able to remain stable without significant degradation in the manufacturing process and at the same time are reactive to produce enough free hydrazine in situ for successful (99m)Tc-labeling. In an initial screening study, only hydrazones 6 and 8, which contain aliphatic substituents, gave satisfactory (>/=90%) yields of RP444 using 50 degrees C and 30 min of heating. However, their solution instability excludes them from being used as commercial reagents. Hydrazones 1 and 4 gave >/=90% yields when the reaction mixtures were heated at 80 degrees C for 30 min. Both hydrazone 1 and hydrazone 4 can be used as the final intermediate for preparation of RP444. The combination of 40 mg of tricine, 1-10 mg of TPPTS, 20-40 microg of hydrazone 1 or 4 for 50 mCi of [(99m)Tc]pertechnetate, 20-50 microg of stannous chloride, pH 4.5 +/- 0.5, and heating at 80 degrees C for 30 min gives the best yield for RP444. It is surprising that hydrazones 1 and 4 have both the solution stability with respect to decomposition and to reaction with aldehydes and ketones and yet are able to hydrolyze in situ to produce enough free HYNICtide for the (99m)Tc-labeling.
- Published
- 1999
- Full Text
- View/download PDF
26. Synthesis of stable hydrazones of a hydrazinonicotinyl-modified peptide for the preparation of 99mTc-labeled radiopharmaceuticals.
- Author
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Harris TD, Sworin M, Williams N, Rajopadhye M, Damphousse PR, Glowacka D, Poirier MJ, and Yu K
- Subjects
- Chromatography, High Pressure Liquid, Drug Stability, Formaldehyde chemistry, Isotope Labeling methods, Niacinamide chemistry, Organophosphorus Compounds chemistry, Platelet Glycoprotein GPIIb-IIIa Complex antagonists & inhibitors, Sodium Pertechnetate Tc 99m chemistry, Succinimides chemistry, Sulfonic Acids chemistry, Hydrazones chemical synthesis, Niacinamide analogs & derivatives, Organotechnetium Compounds chemical synthesis, Peptides, Cyclic chemical synthesis, Peptides, Cyclic chemistry, Radiopharmaceuticals chemical synthesis
- Abstract
Hydrazones of a 6-hydrazinonicotinyl-modified cyclic peptide IIb/IIIa receptor antagonist were prepared in order to protect the hydrazine moiety from reaction with trace aldehyde and ketone impurities encountered during the process of manufacturing and compounding lyophilized kits used in radiolabeling with (99m)Tc. Hydrazones were prepared by either a direct reaction of the 6-hydrazinonicotinyl-modified cyclic peptide with carbonyl compounds or by conjugation of the cyclic peptide with hydrazones of succinimidyl 6-hydrazinonicotinate. Stability of the hydrazones was evaluated by treatment with formaldehyde. Hydrazones derived from simple aliphatic aldehydes underwent an exchange reaction with formaldehyde, while hydrazones of aromatic aldehydes and ketones provided the greatest level of stability when challenged with formaldehyde. We have been successful in protecting 6-hydrazinonicotinyl-modified cyclic peptides from reacting with formaldehyde, while still allowing sufficient reactivity for radiolabeling with (99m)Tc. The hydrazones of succinimidyl 6-hydrazinonicotinate are convenient and general reagents for forming 6-hydrazinonicotinyl conjugates with amino-functionalized bioactive molecules.
- Published
- 1999
- Full Text
- View/download PDF
27. Ligands for the tyrosine kinase p56lck SH2 domain: discovery of potent dipeptide derivatives with monocharged, nonhydrolyzable phosphate replacements.
- Author
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Beaulieu PL, Cameron DR, Ferland JM, Gauthier J, Ghiro E, Gillard J, Gorys V, Poirier M, Rancourt J, Wernic D, Llinas-Brunet M, Betageri R, Cardozo M, Hickey ER, Ingraham R, Jakes S, Kabcenell A, Kirrane T, Lukas S, Patel U, Proudfoot J, Sharma R, Tong L, and Moss N
- Subjects
- Crystallography, X-Ray, Dipeptides chemistry, Ligands, Models, Molecular, Protein Binding, Structure-Activity Relationship, Dipeptides chemical synthesis, Lymphocyte Specific Protein Tyrosine Kinase p56(lck) metabolism, src Homology Domains
- Abstract
p56lck is a member of the src family of tyrosine kinases. Through modular binding units called SH2 domains, p56lck promotes phosphotyrosine-dependent protein-protein interactions and plays a critical role in signal transduction events that lead to T-cell activation. Starting from the phosphorylated dipeptide (2), a high-affinity ligand for the p56lck SH2 domain, we have designed novel dipeptides that contain monocharged, nonhydrolyzable phosphate group replacements and bind to the protein with KD's in the low micromolar range. Replacement of the phosphate group in phosphotyrosine-containing sequences by a (R/S)-hydroxyacetic (compound 8) or an oxamic acid (compound 10) moiety leads to hydrolytically stable, monocharged ligands, with 83- and 233-fold decreases in potency, respectively. This loss in binding affinity can be partially compensated for by incorporating large lipophilic groups at the inhibitor N-terminus. These groups provide up to 13-fold increases in potency depending on the nature of the phosphate replacement. The discovery of potent (2-3 microM), hydrolytically stable dipeptide derivatives, bearing only two charges at physiological pH, represents a significant step toward the discovery of compounds with cellular activity and the development of novel therapeutics for conditions associated with undesired T-cell proliferation.
- Published
- 1999
- Full Text
- View/download PDF
28. Phosphotyrosine-containing dipeptides as high-affinity ligands for the p56lck SH2 domain.
- Author
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Llinaś-Brunet M, Beaulieu PL, Cameron DR, Ferland JM, Gauthier J, Ghiro E, Gillard J, Gorys V, Poirier M, Rancourt J, Wernic D, Betageri R, Cardozo M, Jakes S, Lukas S, Patel U, Proudfoot J, and Moss N
- Subjects
- Binding, Competitive, Dipeptides chemistry, Dipeptides metabolism, Enzyme Inhibitors chemistry, Enzyme Inhibitors metabolism, Ligands, Lymphocyte Specific Protein Tyrosine Kinase p56(lck) antagonists & inhibitors, Models, Molecular, Structure-Activity Relationship, Dipeptides chemical synthesis, Enzyme Inhibitors chemical synthesis, Lymphocyte Specific Protein Tyrosine Kinase p56(lck) metabolism, Phosphotyrosine chemistry, src Homology Domains
- Abstract
Src homology-2 (SH2) domains are noncatalytic motifs containing approximately 100 amino acid residues that are involved in intracellular signal transduction. The phosphotyrosine-containing tetrapeptide Ac-pYEEI binds to the SH2 domain of p56lck (Lck) with an affinity of 0.1 microM. Starting from Ac-pYEEI, we have designed potent antagonists of the Lck SH2 domain which are reduced in peptidic character and in which the three carboxyl groups have been eliminated. The two C-terminal amino acids (EI) have been replaced by benzylamine derivatives and the pY + 1 glutamic acid has been substituted with leucine. The best C-terminal fragment identified, (S)-1-(4-isopropylphenyl)ethylamine, binds to the Lck SH2 domain better than the C-terminal dipeptide EI. Molecular modeling suggests that the substituents at the 4-position of the phenyl ring occupy the pY + 3 lipophilic pocket in the SH2 domain originally occupied by the isoleucine side chain. This new series of phosphotyrosine-containing dipeptides binds to the Lck SH2 domain with potencies comparable to that of tetrapeptide 1.
- Published
- 1999
- Full Text
- View/download PDF
29. Synthesis, characterization, and quantitation of a 4-aminobiphenyl-DNA adduct standard.
- Author
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Beland FA, Doerge DR, Churchwell MI, Poirier MC, Schoket B, and Marques MM
- Subjects
- Aminobiphenyl Compounds toxicity, Animals, Carcinogens toxicity, Cattle, Chromatography, High Pressure Liquid, DNA chemistry, DNA drug effects, DNA metabolism, DNA Adducts chemical synthesis, Deoxyguanosine chemistry, Hydrolysis, Liver drug effects, Liver metabolism, Male, Mass Spectrometry, Mice, Mice, Inbred Strains, Phosphorus Radioisotopes, Aminobiphenyl Compounds chemistry, Carcinogens chemistry, DNA Adducts chemistry, Deoxyguanosine analogs & derivatives
- Abstract
32P-Postlabeling is a powerful technique for the detection of DNA adducts; however, quantitation of DNA adducts by this method can result in errors due to differences in hydrolysis and labeling efficiencies between adducted and normal nucleotides. We have synthesized a DNA sample modified with 4-aminobiphenyl to serve as a quantitation standard for 32P-postlabeling and other DNA adduct detection methodologies. [2,2'-3H]-N-Hydroxy-4-aminobiphenyl was reacted with calf thymus DNA at pH 5 to give 62 +/- 0.8 adducts/10(8) nucleotides (mean +/- SD) on the basis of 3H content. HPLC analyses following enzymatic hydrolysis to nucleosides indicated one major adduct, N-(deoxyguanosin-8-yl)-4-aminobiphenyl (dG-C8-4-ABP). The adduct identity was confirmed by HPLC/electrospray ionization mass spectrometry, which indicated a modification level of 19 +/- 1.7 dG-C8-4-ABP/10(8) nucleotides. 32P-Postlabeling analysis gave a value of 0.84 dG-C8-4-ABP/10(8) nucleotides, while a dissociation-enhanced lanthanide fluoroimmunoassay (DELFIA) indicated levels of 82 +/- 26 and 63 +/- 20 dG-C8-4-ABP/10(8) nucleotides after enzymatic hydrolysis to nucleotides and nucleosides, respectively. The utility of the DNA adduct standard was determined by assessing the level of dG-C8-4-ABP in liver DNA from mice treated with [2,2'-3H]-4-aminobiphenyl. 32P-Postlabeling analyses, based upon measuring the extent of the 32P incorporation, underestimated the levels of dG-C8-4-ABP, while DELFIA, using a G-C8-4-ABP quantitation standard, overestimated the adduct levels. The adduct levels determined by HPLC/electrospray ionization mass spectrometry best reflected those obtained from 3H incorporation. When the 32P-postlabeling analyses and the DELFIA were conducted using the DNA modified in vitro with dG-C8-4-ABP as a quantitation standard, accurate estimations of the extent of in vivo formation of dG-C8-4-ABP were obtained.
- Published
- 1999
- Full Text
- View/download PDF
30. Peptidomimetic inhibitors of the human cytomegalovirus protease.
- Author
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Ogilvie W, Bailey M, Poupart MA, Abraham A, Bhavsar A, Bonneau P, Bordeleau J, Bousquet Y, Chabot C, Duceppe JS, Fazal G, Goulet S, Grand-Maître C, Guse I, Halmos T, Lavallée P, Leach M, Malenfant E, O'Meara J, Plante R, Plouffe C, Poirier M, Soucy F, Yoakim C, and Déziel R
- Subjects
- Antiviral Agents pharmacology, Cytomegalovirus enzymology, Humans, Protease Inhibitors pharmacology, Structure-Activity Relationship, Antiviral Agents chemical synthesis, Cytomegalovirus drug effects, Protease Inhibitors chemical synthesis
- Abstract
The development of peptidomimetic inhibitors of the human cytomegalovirus (HCMV) protease showing sub-micromolar potency in an enzymatic assay is described. Selective substitution of the amino acid residues of these inhibitors led to the identification of tripeptide inhibitors showing improvements in inhibitor potency of 27-fold relative to inhibitor 39 based upon the natural tetrapeptide sequence. Small side chains at P1 were well tolerated by this enzyme, a fact consistent with previous observations. The S2 binding pocket of HCMV protease was very permissive, tolerating lipophilic and basic residues. The substitutions tried at P3 indicated that a small increase in inhibitor potency could be realized by the substitution of a tert-leucine residue for valine. Substitutions of the N-terminal capping group did not significantly affect inhibitor potency. Pentafluoroethyl ketones, alpha,alpha-difluoro-beta-keto amides, phosphonates and alpha-keto amides were all effective substitutions for the activated carbonyl component and gave inhibitors which were selective for HCMV protease. A slight increase in potency was observed by lengthening the P1' residue of the alpha-keto amide series of inhibitors. This position also tolerated a variety of groups making this a potential site for future modifications which could modulate the physicochemical properties of these molecules.
- Published
- 1997
- Full Text
- View/download PDF
31. Cisplatin-DNA adduct determination in the hepatic albumin gene as compared to whole genomic DNA.
- Author
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Zhang Z and Poirier MC
- Subjects
- Animals, Cell Line, Female, Genome, Liver Neoplasms, Experimental metabolism, Polymerase Chain Reaction, Rats, Rats, Sprague-Dawley, Tumor Cells, Cultured, Albumins genetics, Cisplatin analysis, DNA analysis, DNA Adducts analysis, Liver chemistry
- Abstract
A quantitative time-resolved fluorometriC PCR-stop assay has been used to determine cisplatin-DNA adducts in a 1.612 kb region and a polymorphic 1.85 kb region of the rat liver albumin gene containing parts of exons B and C and all of the BC intron. The values were compared to adducts in the whole rat liver genome determined by atomic absorbance spectrometry (AAS). Initial validation of the PCR-stop assay involved modification of purified rat liver DNA in vitro to desired levels by incubation with different concentrations of cisplatin. In these DNA samples, cisplatin-DNA adduct levels determined in the 1612 base pair fragment by PCR-stop assay were shown to be similar to those determined in the whole genomic DNA by AAS. In freshly isolated primary rat hepatocytes cultured for 2 h with 50, 75, 100, and 150 microM cisplatin, adduct levels determined by the PCR-stop assay were similar to those measured by AAS. Cultured MH1C1 rat hepatoma cells, which express albumin, had a polymorphism in the rat albumin gene such that the fragment amplified with the same primers was about 1.85 kb (13% larger). When MH1C1 cells were exposed to 5, 15, 25, 50, and 75 microM cisplatin for 24 h, 50% cell kill was at 21.0 +/- 5.5 microM cisplatin. For doses of 15-75 microM cisplatin, the cisplatin-DNA adduct levels in this fragment, measured by PCR-stop assay, were about one-half of those in the whole genomic DNA measured by AAS. In addition, MH1C1 cells exposed to 150 microM cisplatin for 4 h and subsequently incubated with fresh medium for 24 h showed no change in adduct level in whole genomic DNA during this time but showed a 29% adduct removal in the 1.85 kb fragment. The data demonstrate that this 1.85 kb region containing expressed regions of the albumin gene has undergone both less adduction and more rapid adduct removal, as compared to the MH1C1 genome as a whole.
- Published
- 1997
- Full Text
- View/download PDF
32. Peptidomimetic inhibitors of herpes simplex virus ribonucleotide reductase with improved in vivo antiviral activity.
- Author
-
Moss N, Beaulieu P, Duceppe JS, Ferland JM, Garneau M, Gauthier J, Ghiro E, Goulet S, Guse I, Jaramillo J, Llinas-Brunet M, Malenfant E, Plante R, Poirier M, Soucy F, Wernic D, Yoakim C, and Déziel R
- Subjects
- Animals, Antiviral Agents chemistry, Cells, Cultured, Dipeptides chemistry, Enzyme Inhibitors chemistry, Keratitis, Herpetic drug therapy, Magnetic Resonance Spectroscopy, Mice, Oligopeptides chemistry, Simplexvirus enzymology, Stereoisomerism, Structure-Activity Relationship, Urea chemistry, Urea pharmacology, Antiviral Agents pharmacology, Dipeptides pharmacology, Enzyme Inhibitors pharmacology, Oligopeptides pharmacology, Ribonucleotide Reductases antagonists & inhibitors, Simplexvirus drug effects, Urea analogs & derivatives
- Abstract
We have been investigating the potential of a new class of antiviral compounds. These peptidomimetic derivatives prevent association of the two subunits of herpes simplex virus (HSV) ribonucleotide reductase (RR), an enzyme necessary for efficient replication of viral DNA. The compounds disclosed in this paper build on our previously published work. Structure-activity studies reveal beneficial modifications that result in improved antiviral potency in cell culture in a murine ocular model of HSV-induced keratitis. These modifications include a stereochemically defined (2,6-dimethylcyclohexyl)amino N-terminus, two ketomethylene amide bond isosteres, and a (1-ethylneopentyl)amino C-terminus. These three modifications led to the preparation of BILD 1351, our most potent antiherpetic agent containing a ureido N-terminus. Incorporation of the C-terminal modification into our inhibitor series based on a (phenylpropionyl)valine N-terminus provided BILD 1357, a significantly more potent antiviral compound than our previously published best compound, BILD 1263.
- Published
- 1996
- Full Text
- View/download PDF
33. Labeling cyclic glycoprotein IIb/IIIa receptor antagonists with 99mTc by the preformed chelate approach: effects of chelators on properties of [99mTc]chelator-peptide conjugates.
- Author
-
Liu S, Edwards DS, Looby RJ, Poirier MJ, Rajopadhye M, Bourque JP, and Carroll TR
- Subjects
- Chelating Agents chemical synthesis, Chromatography, High Pressure Liquid, Molecular Structure, Oligopeptides, Chelating Agents chemistry, Isotope Labeling, Peptides, Cyclic chemistry, Platelet Glycoprotein GPIIb-IIIa Complex antagonists & inhibitors, Sodium Pertechnetate Tc 99m
- Abstract
Several cyclic GPIIb/IIIa receptor antagonists were labeled with 99mTc by the preformed chelate approach using chelators such as H4L1 [4,5-bis(mercaptoacetamido)pentanoic acid], H4L2 [3,4-bis-(mercaptoacetamido)benzoic acid], H3L3 [2-(mercapto)ethylaminoacetyl-L-cysteine], H4L4 [N-(mercaptoacetyl)glycylglycylglycine], H4L5 [N-[2-(mercapto)propionyl]glycylglycylglycine], and H4L6 [N-[2-(mercapto)propionyl]glycylglycyl-gamma-aminobutyric acid]. In this approach, the [99mTc]chelator complexes are formed first, followed by the activation of the carboxylic group on the complex by formation of its tetrafluorophenol (TFP) ester and the conjugation of the TFP ester with an amino group of a cyclic GPIIb/IIIa receptor antagonist. The 99mTc-labeled cyclic GPIIb/IIIa receptor antagonists were characterized by radio-HPLC (high-performance liquid chromatography); differences in lipophilicity of the [99mTc]chelator-peptide conjugate are attributable to the effects of both the cyclic peptide and the chelator.
- Published
- 1996
- Full Text
- View/download PDF
34. Labeling a hydrazino nicotinamide-modified cyclic IIb/IIIa receptor antagonist with 99mTc using aminocarboxylates as coligands.
- Author
-
Liu S, Edwards DS, Looby RJ, Harris AR, Poirier MJ, Barrett JA, Heminway SJ, and Carroll TR
- Subjects
- Amino Acid Sequence, Chromatography, High Pressure Liquid, Drug Stability, Indicators and Reagents, Kinetics, Ligands, Molecular Sequence Data, Niacinamide, Organotechnetium Compounds metabolism, Radioligand Assay, Structure-Activity Relationship, Organotechnetium Compounds chemical synthesis, Platelet Glycoprotein GPIIb-IIIa Complex antagonists & inhibitors, Technetium
- Abstract
A series of 99mTc complexes containing a hydrazinonicotinamide-conjugated cyclic IIb/IIIa receptor antagonist, cyclo(D-Val-NMeArg-Gly-Asp-Mamb-(hydrazinonicotinyl-5- (6-aminocaproic acid))), were synthesized in high yield using tricine or other aminocarboxylates as coligands. These 99mTc complexes have the potential to be used as thrombus imaging agents. The radiolabeling of the HYNIC-conjugated cyclic IIb/IIIa peptide (HYNICtide) was carried out by reaction with pertechnetate in the presence of excess tricine and stannous chloride at pH 4-5. The reaction time and temperature depend on the amount of the HYNICtide and pertechnetate used for the radiolabeling. Very high specific activity (> or = 20,000 mCi/mumol) can be achieved for the complex [99mTc(HYNICtide)(tricine)2] without postlabeling purification. The complex [99mTc(HYNICtide)(tricine)2] was found by two reversed phase HPLC methods to exist as multiple species, some of which interconvert, depending on the temperature, reaction time, and pH of the reaction mixture. The presence of these multiple species is most likely due to different bonding modalities of either the hydrazine moiety of the HYNICtide or the two tricine coligands. The complex [99mTc(HYNICtide)(EDDA)] (EDDA = ethylenediamine-N,N'-diacetic acid) was prepared either by reacting the cyclic IIb/IIIa HYNICtide with pertechnetate, excess EDDA, and stannous chloride at pH 4-5 and 75 degrees C for 30 min or by reacting excess EDDA with [99mTc(HYNICtide)(tricine)2]. The complex [99mTc(HYNICtide)(EDDA)] was found to be stable for at least 12 h in the reaction mixture. Three major species were detected in the radio-HPLC chromatograms, presumably due to the more limited number of possible coordination isomers. Similar results were obtained using other polydentate aminocarboxylates (such as HEDTA, N-(2-hydroxyethyl)ethylenediaminetriacetic acid) as coligands. It is clear that the replacement of tricine by other polydentate aminocarboxylates produces 99mTc-HYNICtide complexes with higher stability and fewer coordination isomers.
- Published
- 1996
- Full Text
- View/download PDF
35. DNA adduct measurements and tumor incidence during chronic carcinogen exposure in animal models: implications for DNA adduct-based human cancer risk assessment.
- Author
-
Poirier MC and Beland FA
- Subjects
- Animals, Carcinogenicity Tests, Carcinogens metabolism, DNA drug effects, Humans, Neoplasms, Experimental pathology, Carcinogens toxicity, DNA metabolism, DNA Damage, Neoplasms, Experimental chemically induced, Risk
- Published
- 1992
- Full Text
- View/download PDF
36. Derivative fluorescence spectral analysis of polycyclic aromatic hydrocarbon-DNA adducts in human placenta.
- Author
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Weston A, Manchester DK, Poirier MC, Choi JS, Trivers GE, Mann DL, and Harris CC
- Subjects
- Biotransformation, Chromatography, Affinity, Chromatography, High Pressure Liquid, Cross Reactions, DNA drug effects, Enzyme-Linked Immunosorbent Assay, Female, Fluorescence, Humans, In Vitro Techniques, Polycyclic Compounds toxicity, Pregnancy, Spectrometry, Fluorescence, DNA metabolism, Placenta chemistry, Polycyclic Compounds pharmacokinetics
- Abstract
Metabolic activation in humans of chemical carcinogens found in the environment results in the formation of carcinogen-DNA adducts in vivo. Some polycyclic aromatic hydrocarbon-DNA adducts in human DNA can be hydrolyzed under mildly acidic conditions to yield tetrahydrotetrol derivatives which may then be detected by synchronous fluorescence spectroscopy. In an analysis of human placental DNA, second derivative spectroscopy alone was unable to resolve the synchronous fluorescent signature for r-7,t-8,t-9,c-10-tetrahydroxy-7,8,9,10-tetrahydrobenzo[alpha]pyrene from a crude extract, because a complex array of other fluorescent materials was also present. Purification of the sample by a combination of chromatographic procedures including immunoaffinity chromatography and HPLC has now been shown to yield r-7,t-8,t-9,c-10-tetrahydroxy-7,8,9,10-tetrahydrobenzo[alpha]pyrene residues from human DNA that are spectroscopically pure at the second derivative level. Immunoaffinity columns were prepared with rabbit antiserum raised against DNA that had been modified with (+/-)-r-7,t-8-dihydroxy-t-9,10-epoxy-7,8,9,10-tetrahydrobenzo[alpha]pyre ne. This antiserum has now been shown to recognize DNA samples that have been modified with six different polycyclic aromatic hydrocarbon diol epoxides and is probably only specific for a broad spectrum of polycyclic aromatic hydrocarbon-DNA adducts. Adducts were eluted from the immunoaffinity columns, hydrolyzed with acid, and extracted into isoamyl alcohol, before being subjected to high-performance liquid chromatography. These experiments reveal important limitations of second derivative fluorescence spectroscopy as a tool in the analysis of complex environmental mixtures. Furthermore, they extensively define the ability of anti-benzo[alpha]pyrenediol epoxide-DNA antibodies to recognize different types of polycyclic aromatic hydrocarbon-DNA adducts.
- Published
- 1989
- Full Text
- View/download PDF
37. Base pairing and template specificity during deoxyribonucleic acid repair synthesis in human and mouse cells.
- Author
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Lieberman MW and Poirier MC
- Subjects
- Animals, Cell Division, Cell Line, Cells, Cultured, Centrifugation, Density Gradient, Chromatography, Chromatography, DEAE-Cellulose, DNA biosynthesis, Diploidy, Fibroblasts metabolism, Humans, Hydroxyapatites, Lung embryology, Mice, Pyrimidines metabolism, Radiation Effects, Ribonucleases, Silver, Temperature, Templates, Genetic, Thymidine metabolism, Time Factors, Tritium, Ultraviolet Rays, DNA Repair, DNA Replication
- Published
- 1974
- Full Text
- View/download PDF
38. Distribution of deoxyribonucleic acid repair synthesis among repetitive and unique sequences in the human diploid genome.
- Author
-
Lieberman MW and Poirier MC
- Subjects
- Benz(a)Anthracenes pharmacology, Cell Line, DNA radiation effects, Fibroblasts drug effects, Fibroblasts metabolism, Fibroblasts radiation effects, Fluorenes pharmacology, Hot Temperature, Humans, Hydroxyurea pharmacology, Kinetics, Lung embryology, Nucleic Acid Denaturation, Nucleic Acid Renaturation, Radiation Effects, Spectrophotometry, Ultraviolet, Time Factors, Ultraviolet Rays, DNA biosynthesis, DNA Repair, DNA Replication, Diploidy, Genotype
- Published
- 1974
- Full Text
- View/download PDF
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