8,502 results on '"Bicyclic molecule"'
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2. Nucleophilic Catalyzed Structural Binary Cleavage of a Fused [5,5]-Bicyclic Compound
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Ajay Kumar Chinnam, Richard J. Staples, and Jean'ne M. Shreeve
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Bicyclic molecule ,Chemistry ,Organic Chemistry ,Detonation ,Binary number ,Pyrazole ,Cleavage (embryo) ,Ring (chemistry) ,Biochemistry ,Combinatorial chemistry ,Catalysis ,chemistry.chemical_compound ,Nucleophile ,Physical and Theoretical Chemistry - Abstract
Structural binary cleavage of 3,7-diamino-2,6-dinitro-1H,5H-pyrazolo-[1,2-a]pyrazole-1,5-dione 3, under nucleophilic conditions, leads to the formation of a monocyclic pyrazole unit of 5-amino-4-nitro-1,2-dihydro-3H-pyrazol-3-one, 4. Additionally, various salts of the pyrazole ring were synthesized and fully characterized. Detonation properties and mechanical sensitivities of 4 and other new compounds are remarkably improved compared to 3. This simple and efficient strategy is highly desirable for future studies on the development of insensitive and high performing materials.
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- 2021
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3. Talarodrides A–F, Nonadrides from the Antarctic Sponge-Derived Fungus Talaromyces sp. HDN1820200
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Qian Che, Guojian Zhang, Luyao Huang, Dehai Li, Xiao Zhang, Yi Zhao, Tianjiao Zhu, and Chunxiao Sun
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Pharmacology ,biology ,Bicyclic molecule ,Chemistry ,Stereochemistry ,Organic Chemistry ,Pharmaceutical Science ,Maleic anhydride ,Fungus ,biology.organism_classification ,Proteus mirabilis ,Analytical Chemistry ,Sponge ,chemistry.chemical_compound ,Complementary and alternative medicine ,Furan ,Drug Discovery ,Vibrio parahemolyticus ,Molecular Medicine ,Talaromyces sp - Abstract
Six new nonadride derivatives, named talarodrides A-F (1-6), were isolated from the Antarctic sponge-derived fungus Talaromyces sp. HDN1820200. All structures including the absolute configurations were deduced by extensive spectroscopic analysis and computational ECD calculations. Compounds 1-4 share a rare caged bicyclo[4.3.1]-deca-1,6-diene with a bridgehead olefin and maleic anhydride core skeleton, while compounds 5 and 6 possess the first case of a naturally occurring 5/7/6 methanocyclonona[c]furan skeleton. Talarodride A (1) and talarodride B (2) showed selective inhibitory effects against Proteus mirabilis and Vibrio parahemolyticus with MICs of 3.13-12.5 μM.
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- 2021
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4. Construction of Saturated Oxazolo[3,2-b][1,2]oxazines via Tandem [3+2]-Cycloaddition/[1,3]-Rearrangement of Cyclic Nitronates and Ketenes
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Ivan S. Golovanov, Yulia V. Nelyubina, Alexey Yu. Sukhorukov, Sema L. Ioffe, and Roman S. Malykhin
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chemistry.chemical_classification ,chemistry.chemical_compound ,Tandem ,Bicyclic molecule ,Chemistry ,Stereochemistry ,Organic Chemistry ,Ketene ,Oxazines ,Bond cleavage ,Cycloaddition ,Stereocenter - Abstract
Reaction of six-membered cyclic nitronates with disubstituted ketenes affords hitherto unknown saturated oxazolo[3,2-b][1,2]oxazines possessing up to four contiguous stereogenic centers. The process involves a tandem of [3+2]-cycloaddition across the C═O bond of ketene, followed by a spontaneous [1,3]-rearrangement of transient vinylidene-substituted bicyclic nitrosoacetals. DFT calculations of the mechanism suggest that the [1,3]-O,C-shift proceeds through a recyclization of a biradical intermediate formed by an unusually mild homolytic cleavage of the N-O bond. The resulting products can be utilized as precursors of other fused 1,2-oxazines derivatives, in particular 1,2-oxazino-1,2,4-triazin-3-ones.
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- 2021
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5. Synthesis of α-Quaternary Bicyclo[1.1.1]pentanes through Synergistic Organophotoredox and Hydrogen Atom Transfer Catalysis
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Edward A. Anderson, Alistair J. Sterling, Nils Frank, James J. Mousseau, and Jeremy Nugent
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chemistry.chemical_compound ,Propellane ,Bicyclic molecule ,chemistry ,Radical ,Organic Chemistry ,Pentanes ,Hydrogen atom ,Physical and Theoretical Chemistry ,Biochemistry ,Combinatorial chemistry ,Stereocenter ,Catalysis - Abstract
Bicyclo[1.1.1]pentanes (BCPs) are important in drug design as sp3-rich bioisosteres of arenes and tert-butyl groups; however, the preparation of BCPs with adjacent quaternary carbons is barely known. We report a facile synthesis of α-quaternary BCPs using organophotoredox and hydrogen atom transfer catalysis in which α-keto radicals, generated through oxidation of β-ketocarbonyls, undergo efficient addition to [1.1.1]propellane. The BCP products can be transformed into a variety of useful derivatives, including enantioenriched BCPs featuring α-quaternary stereocenters.
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- 2021
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6. Synthesis of Bicyclic N-Heterocycles via Photoredox Cycloaddition of Imino-Alkynes and Imino-Alkenes
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Hyeonji Oh, Bokyeong Ryou, Minju Kim, Jinhwi Park, Jun-Ho Choi, and Cheol-Min Park
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Bicyclic molecule ,Chemistry ,General Chemistry ,Medicinal chemistry ,Catalysis ,Cycloaddition - Published
- 2021
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7. Synthesis of Bridged Oxabicycles via Cascade Reactions involving O-Acyloxocarbenium Ion Intermediates
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Sanghee Kim, Soojun Park, Hongjun Jeon, Seokwoo Lee, and Sang Won Choi
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chemistry.chemical_compound ,Bicyclic molecule ,Nucleophile ,Chemistry ,Cascade ,Organic Chemistry ,Electrophile ,Acetal ,Organic synthesis ,Physical and Theoretical Chemistry ,Biochemistry ,Combinatorial chemistry ,Ion - Abstract
Compared to related electrophilic species, O-acyloxocarbenium ions (AOIs) have been much less utilized in organic synthesis due to the lack of an efficient formation method. Here, we present a facile and simple approach for the generation of AOI from ester and acetal groups. Based on our AOI system with a pendant nucleophile, we obtained a unique bridged bicyclic system via an epoxonium-like transition state. The proposed mechanism is based on experimental and computational studies.
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- 2021
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8. Reduction of a Bicyclo[1.1.0]tetrasil-1(3)-ene with LiAlH4 Leading to an Isolable Cyclotrisilenide
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Takumi Nukazawa and Takeaki Iwamoto
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Inorganic Chemistry ,Reduction (complexity) ,Bicyclic molecule ,Chemistry ,Organic Chemistry ,Physical and Theoretical Chemistry ,Medicinal chemistry ,Ene reaction - Published
- 2021
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9. Comprehensive Strategies to Bicyclic Prolines: Applications in the Synthesis of Potent Arginase Inhibitors
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Anandan Palani, Matthew Lloyd Childers, Qinglin Pu, Matthew J. Mitcheltree, Symon Gathiaka, Christian Fischer, Lisa Nogle, Rachel L. Palte, Jared N. Cumming, J. Richard Miller, Spencer McMinn, Hai-Young Kim, Hongjun Zhang, Charles A. Lesburg, Adam Beard, Donovon A. Adpressa, Josep Saurí, Derun Li, Theodore A. Martinot, Thomas W. Lyons, David L. Sloman, Jialiang Wang, Peter Spacciapoli, Min Lu, and Abdelghani Achab
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Arginase ,Bicyclic molecule ,Stereochemistry ,Chemistry ,Organic Chemistry ,Drug Discovery ,Proline ,Biochemistry - Abstract
[Image: see text] Comprehensive synthetic strategies afforded a diverse set of structurally unique bicyclic proline-containing arginase inhibitors with a high degree of three-dimensionality. The analogs that favored the Cγ-exo conformation of the proline improved the arginase potency over the initial lead. The novel synthetic strategies reported here not only enable access to previously unknown stereochemically complex proline derivatives but also provide a foundation for the future synthesis of bicyclic proline analogs, which incorporate inherent three-dimensional character into building blocks, medicine, and catalysts and could have a profound impact on the conformation of proline-containing peptides and macrocycles.
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- 2021
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10. Pinene-Based Oxidative Synthetic Toolbox for Scalable Polyester Synthesis
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Eva Malmström, Antonino Biundo, Elisabeth Söderberg, Boyang Guo, Shubhankar Bhattacharyya, Uwe T. Bornscheuer, Caroline Mosbech, Per-Olof Syrén, Arne Stamm, Johannes Öhlin, Linda Fogelström, and Peter Olsén
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chemistry.chemical_classification ,Condensation polymer ,Bicyclic molecule ,Diol ,terpene lactone ,Dimethyl maleate ,coatings ,diol ,Polymer ,Article ,biobased polymers ,Polyester ,Chemistry ,chemistry.chemical_compound ,chemistry ,Polymerization ,α-pinene ,Copolymer ,Organic chemistry ,QD1-999 ,terpenes - Abstract
Generation of renewable polymers is a long-standing goal toward reaching a more sustainable society, but building blocks in biomass can be incompatible with desired polymerization type, hampering the full implementation potential of biomaterials. Herein, we show how conceptually simple oxidative transformations can be used to unlock the inherent reactivity of terpene synthons in generating polyesters by two different mechanisms starting from the same α-pinene substrate. In the first pathway, α-pinene was oxidized into the bicyclic verbanone-based lactone and subsequently polymerized into star-shaped polymers via ring-opening polymerization, resulting in a biobased semicrystalline polyester with tunable glass transition and melting temperatures. In a second pathway, polyesters were synthesized via polycondensation, utilizing the diol 1-(1′-hydroxyethyl)-3-(2′-hydroxy-ethyl)-2,2-dimethylcyclobutane (HHDC) synthesized by oxidative cleavage of the double bond of α-pinene, together with unsaturated biobased diesters such as dimethyl maleate (DMM) and dimethyl itaconate (DMI). The resulting families of terpene-based polyesters were thereafter successfully cross-linked by either transetherification, utilizing the terminal hydroxyl groups of the synthesized verbanone-based materials, or by UV irradiation, utilizing the unsaturation provided by the DMM or DMI moieties within the HHDC-based copolymers. This work highlights the potential to apply an oxidative toolbox to valorize inert terpene metabolites enabling generation of biosourced polyesters and coatings thereof by complementary mechanisms.
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- 2021
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11. Direct Observation of Reactive Intermediates by Time-Resolved Spectroscopy Unravels the Mechanism of a Radical-Induced 1,2-Metalate Rearrangement
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Valerio Fasano, Andrew J. Orr-Ewing, Mahima Sneha, Ian P. Clark, Adam Noble, Varinder K. Aggarwal, and Luke J Lewis-Borrell
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chemistry.chemical_classification ,Bicyclic molecule ,010405 organic chemistry ,Reaction step ,Iodide ,Reactive intermediate ,Infrared spectroscopy ,Settore CHIM/06 - Chimica Organica ,General Chemistry ,010402 general chemistry ,Photochemistry ,01 natural sciences ,Biochemistry ,Catalysis ,0104 chemical sciences ,BCS and TECS CDTs ,Colloid and Surface Chemistry ,chemistry ,Time-resolved spectroscopy ,Spectroscopy ,Alkyl - Abstract
Radical-induced 1,2-metallate rearrangements of boronate complexes are an emerging and promising class of reactions that allow multiple new bonds to be formed in a single, tuneable reaction step. These reactions involve the addition of an alkyl radical, typically generated from an alkyl iodide under photochemical activation, to a boronate complex to produce an α-boryl radical intermediate. From this α-boryl radical, there are two plausible reaction pathways that can trigger the product forming 1,2-metallate rearrangement: iodine atom transfer (IAT) or single electron transfer (SET). Previous steady state techniques have struggled to differentiate these pathways. Here we apply state-of-the-art time-resolved infrared absorption spectroscopy to resolve all the steps in the reaction cycle, by mapping production and consumption of the reactive intermediates over picosecond to millisecond timescales. We apply this technique to a recently reported reaction involving the addition of an electron-deficient alkyl radical to the strained σ‑bond of a bicyclo[1.1.0]butyl boronate complex to form a cyclobutyl boronic ester. We show that the previously proposed SET mechanism does not adequately account for the observed spectral and kinetic data. Instead, we demonstrate that IAT is the preferred pathway for this reaction and is likely to be operative for other reactions of this type.
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- 2021
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12. Piperazinyl Bicyclic Derivatives as Selective Ligands of the α2δ-1 Subunit of Voltage-Gated Calcium Channels
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Ariadna Fernández, Enrique Portillo-Salido, Mónica Porras, Adriana Lorente, José Miguel Vela, Carmen Almansa, Raquel Enrech, J.L. Diaz, Begoña Fernández, Albert Dordal, Sergi Rodríguez-Escrich, Raquel F. Reinoso, and Mónica García
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chemistry.chemical_classification ,Bicyclic molecule ,Voltage-dependent calcium channel ,Chemistry ,Stereochemistry ,Protein subunit ,Organic Chemistry ,Pregabalin ,Biochemistry ,Affinities ,Drug Discovery ,Lipophilicity ,medicine ,Enantiomer ,Alkyl ,medicine.drug - Abstract
[Image: see text] The synthesis and pharmacological activities of a new series of piperazinyl quinazolin-4-(3H)-one derivatives acting toward the α2δ-1 subunit of voltage-gated calcium channels (Ca(v)α2δ-1) are reported. Different positions of a micromolar HTS hit were explored, and best activities were obtained for compounds containing a small alkyl group in position 3 of the quinazolin-4-(3H)-one scaffold and a 3-methyl-piperazin-1-yl- or 3,5-dimethyl-piperazin-1-yl-butyl group in position 2. The activity was shown to reside in the R enantiomer of the chain in position 2, and several eutomers reached single digit nanomolar affinities. Final modification of the central scaffold to reduce lipophilicity provided the pyrido[4,3-d]pyrimidin-4(3H)-one 16RR, which showed high selectivity for Ca(v)α2δ-1 versus Ca(v)α2δ-2, probably linked to its improved analgesic efficacy-safety ratio in mice over pregabalin.
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- 2021
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13. JNJ-67569762, A 2-Aminotetrahydropyridine-Based Selective BACE1 Inhibitor Targeting the S3 Pocket: From Discovery to Clinical Candidate
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Ann Vos, Lieve Lammens, Richard Alexander, Frederik J. R. Rombouts, Michel Surkyn, Kenji Morimoto, Laurent Leclercq, Nigel Austin, Koichi Tsubone, Tatsuhiko Ueno, Michel Anna Jozef De Cleyn, Deborah Dhuyvetter, Ken-ichi Kusakabe, Ard Teisman, Diederik Moechars, Tom Jacobs, An Van Den Bergh, Hirokazu Sumiyoshi, Herman Borghys, Shunsuke Einaru, Soufyan Jerhaoui, Brian Joel Hrupka, and Harrie J.M. Gijsen
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Models, Molecular ,Sulfonyl ,chemistry.chemical_classification ,Pyrrolidines ,Cardiovascular safety ,Dose-Response Relationship, Drug ,Molecular Structure ,Bicyclic molecule ,Amyloid β ,Chemistry ,Pharmacology ,Crystallography, X-Ray ,Highly selective ,Cns toxicity ,Structure-Activity Relationship ,mental disorders ,Drug Discovery ,Reactive metabolite ,Lipophilicity ,Aspartic Acid Endopeptidases ,Humans ,Molecular Medicine ,Amyloid Precursor Protein Secretases - Abstract
The discovery of a novel 2-aminotetrahydropyridine class of BACE1 inhibitors is described. Their pKa and lipophilicity were modulated by a pending sulfonyl group, while good permeability and brain penetration were achieved via intramolecular hydrogen bonding. BACE1 selectivity over BACE2 was achieved in the S3 pocket by a novel bicyclic ring system. An optimization addressing reactive metabolite formation, cardiovascular safety, and CNS toxicity is described, leading to the clinical candidate JNJ-67569762 (12), which gave robust dose-dependent BACE1-mediated amyloid β lowering without showing BACE2-dependent hair depigmentation in preclinical models. We show that 12 has a favorable projected human dose and PK and hence presented us with an opportunity to test a highly selective BACE1 inhibitor in humans. However, 12 was found to have a QT effect upon repeat dosing in dogs and its development was halted in favor of other selective leads, which will be reported in the future.
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- 2021
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14. Heck-Type Coupling of Fused Bicyclic Vinylcyclopropanes: Synthesis of 1,2-Dihydropyridines, 2,3-Dihydro-1H-azepines, 1,4-Cyclohexadienes, and 2H-Pyrans
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Nikolai Wurzer, Oliver Reiser, Urszula Klimczak, Julia Rehbein, Aryaman Pattanaik, Ricardo Almir Angnes, Tobias Babl, Sebastian Fischer, and Dominik Kreutzer
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Coupling (electronics) ,Bicyclic molecule ,Chemistry ,Computational chemistry ,Cyclohexadienes ,General Chemistry ,Catalysis - Published
- 2021
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15. Stereoselective Synthesis of Hydrindane and Hydroazulene Derivatives by Transannular Cyclization of Nine- and Ten-Membered Carbocycles
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Lucas Martínez-García, Karen V. Góñez, F. Javier Sardina, Gustavo Prado, and M. Rita Paleo
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Alkylation ,Diene ,Bicyclic molecule ,Stereochemistry ,Chemistry ,Organic Chemistry ,Ring (chemistry) ,Stereocenter ,chemistry.chemical_compound ,Alkaloids ,Cyclization ,Intramolecular force ,Indans ,Michael reaction ,Stereoselectivity - Abstract
Treatment of cis-fused bicyclic diene dicarboxylates with Li/naphthalene triggers a tandem ring-opening and transannular cyclization process that stereoselectively yields hydroazulenes and hydrindanes derivatives. Cyclononadienyl diesters, which can be isolated after the ring-opening step by judicious choice of the reaction conditions, undergo a tandem conjugate addition/intramolecular Michael addition upon treatment with chiral lithium amides to give bicyclic β-amino esters in a process where 4 contiguous stereocenters are formed with high diastereocontrol. A concise route toward the highly enantioenriched AEF ring core of the aconitine-type alkaloids has been developed as an application of this methodology. The starting cis-fused bicyclic dicarboxylates are easily prepared in one step by reductive alkylation of diisopropyl phthalate (Na/THF, followed by the appropriate bis-electrophiles).
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- 2021
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16. Four-Step Total Synthesis of (+)-Euphococcinine and (±)-Adaline
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Kavirayani R. Prasad and Sopan P Khandare
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Bridged-Ring Compounds ,Bicyclic molecule ,Chemistry ,Stereochemistry ,Organic Chemistry ,Total synthesis ,Stereoisomerism ,Metathesis ,Euphococcinine ,Phosphorene ,chemistry.chemical_compound ,Alkaloids ,Piperidines ,Intramolecular force ,Wittig reaction - Abstract
A four-step enantiospecific total synthesis of bicyclic homotropinone alkaloid euphococcinine and a racemic synthesis of adaline were reported. Key reactions in the synthesis are the diastereoselective addition of a Wittig phosphorene to the ketimines derived from Davis-Ellman sulfinamides, ring-closing metathesis, and intramolecular Michael reactions.
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- 2021
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17. Electrochemical ODI-[5+2] Cascade for the Syntheses of Diversely Functionalized Bicyclo[3.2.1]octane Frameworks
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Hanfeng Ding, Jialei Hu, and Zhaobo Liu
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Natural product ,Bicyclic molecule ,Organic Chemistry ,Hypervalent molecule ,Pinacol rearrangement ,Electrochemistry ,Biochemistry ,Combinatorial chemistry ,Cycloaddition ,chemistry.chemical_compound ,Cascade reaction ,chemistry ,Physical and Theoretical Chemistry ,Octane - Abstract
A metal- and hypervalent iodine reagent-free electrochemical oxidative dearomatization-induced [5+2] cycloaddition/pinacol rearrangement cascade reaction was described. The electrosynthetic method showed strong tolerance for vinylphenols, ethynylphenols, and allenylphenols, which thus enabled the rapid assembly of diversely functionalized bicyclo[3.2.1]octanes in 41-95% yields and up to >20:1 dr. This protocol could be scaled up to gram amounts and should find wide application in complex natural product synthesis.
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- 2021
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18. Total Synthesis and Assignment of the Absolute Configuration of (+)-Omphalic Acid
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Dongsheng Qiu, Tao Zeng, Renzhi Chen, Yuhui Hua, Yujie Niu, Xin Lei, Yandong Zhang, and Huayu Peng
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Cycloaddition Reaction ,Molecular Structure ,Bicyclic molecule ,Stereochemistry ,Organic Chemistry ,Absolute configuration ,Total synthesis ,Stereoisomerism ,Octanes ,Ring (chemistry) ,Biochemistry ,Catalysis ,Cycloaddition ,Bridged Bicyclo Compounds ,chemistry.chemical_compound ,chemistry ,Aldol reaction ,Carboxylation ,Hydrogenation ,Diterpenes ,Physical and Theoretical Chemistry ,Octane - Abstract
Omphalane diterpenoids usually contain a cyclohexane-fused bicyclo[3.2.1]octane scaffold embedded with two continuous quaternary carbon centers, which pose considerable challenges to synthetic chemists. Herein, we reported the first total synthesis of omphalic acid with high stereochemical control, featuring an intermolecular Diels-Alder cycloaddition, ring reorganization through Criegee oxidative cleavage and programmed aldol condensations, conformationally controlled hydrogenation, and Pd-catalyzed carboxylation. The absolute configuration of omphalic acid was defined for the first time via the asymmetric total synthesis facilitated by a derivatization resolution protocol.
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- 2021
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19. Populusene A, an Anti-inflammatory Diterpenoid with a Bicyclo[8,4,1]pentadecane Scaffold from Populus euphratica Resins
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Dai-Wei Wang, Yong-Ming Yan, Yong-Xian Cheng, and Yun-Yun Liu
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chemistry.chemical_classification ,Scaffold ,Bicyclic molecule ,Double bond ,biology ,medicine.drug_class ,Stereochemistry ,Chemistry ,Organic Chemistry ,Hexadecane ,biology.organism_classification ,Biochemistry ,Anti-inflammatory ,Terpenoid ,chemistry.chemical_compound ,Pentadecane ,medicine ,Physical and Theoretical Chemistry ,Populus euphratica - Abstract
Populusene A (1), an unprecedented carbon skeleton featuring a bicyclo[8.4.1]pentadecane nucleus and a bridgehead double bond (anti-Bredt system), and populusin A (2), a cembrane-type diterpenoid possessing an uncommon dioxatricyclo[6.6.1.12,5]hexadecane scaffold, were isolated from the exudates of Populus euphratica. Their structures were elucidated by spectroscopic, computational, and crystallographic methods. A plausible biosynthetic route for 1 and 2 was proposed. Compounds 1 and 2 were found to significantly inhibit the production of TNF-α and IL-6 and the expression of iNOS, COX-2, and p-NF-κB at 125 nM in RAW264.7 cells.
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- 2021
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20. Asymmetric Synthesis of Chiral Bicyclo[2.2.1]hepta-2,5-diene Ligands through Rhodium-Catalyzed Asymmetric Arylative Bis-cyclization of a 1,6-Enyne
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Chen Chen, Haili Wei, Jialin Ming, He Meng, Tamio Hayashi, and Chao Sun
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chemistry.chemical_compound ,Diene ,chemistry ,Enyne ,Bicyclic molecule ,Organic Chemistry ,Enantioselective synthesis ,chemistry.chemical_element ,Physical and Theoretical Chemistry ,Biochemistry ,Medicinal chemistry ,Catalysis ,Rhodium - Abstract
A series of novel chiral diene ligands (1R,4S)-L1, which are based on the bicyclo[2.2.1]heptadiene skeleton and are substituted with methyl and an ester group at the bridgehead carbons, were synthesized through rhodium-catalyzed asymmetric arylative bis-cyclization of 1,6-enyne 1 as a key step. The rhodium catalyst with one of the (1R,4S)-L1 ligands was used for the asymmetric bis-cyclization of 1 giving bicyclic product (1S,4R)-2 of 99% ee, which is a synthetic precursor of (1S,4R)-L1 ligands.
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- 2021
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21. Palladium-Catalyzed Stereoselective Difunctionalization of Bicyclic Alkenes with Organoammonium Salts and Organoboronic Compounds
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Kuan Liu, Yuanyuan Tang, Chunya Li, Long Liu, Zhi Tang, Tianzeng Huang, Jinjin Zhang, and Tieqiao Chen
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chemistry.chemical_compound ,Bicyclic molecule ,Chemistry ,Organic Chemistry ,chemistry.chemical_element ,Organic chemistry ,Stereoselectivity ,Organic synthesis ,Catalysis ,Palladium - Abstract
A palladium-catalyzed difunctionalization of bicyclic alkenes with organoammonium salts and organoboronic compounds was reported. A wide range of functionalized cyclic products, including those bearing functional groups, were produced stereoselectively in good to excellent yields. The gram-scale experiment, one-pot operation, and synthetic application of β-borylated products further demonstrated the synthetic value of this new reaction in organic synthesis.
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- 2021
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22. One-Pot Cyclization and Cleavage of Peptides with N-Terminal Cysteine via the N,S-Acyl Shift of the N-2-[Thioethyl]glycine Residue
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Mateusz Waliczek, Magdalena Wierzbicka, Anna Dziadecka, and Piotr Stefanowicz
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chemistry.chemical_classification ,Residue (chemistry) ,Bicyclic molecule ,Tetrapeptide ,Chemistry ,Stereochemistry ,Organic Chemistry ,Glycine ,Peptide ,Cleavage (embryo) ,Cyclic peptide ,Cysteine - Abstract
We developed a one-pot method for peptide cleavage from a solid support via the N,S-acyl shift of N-2-[thioethyl]glycine and transthioesterification using external thiols to produce cyclic peptides through native chemical self-ligation with the N-terminal cysteine. The feasibility of this methodology is validated by the syntheses of model short peptides, including a tetrapeptide, the bicyclic sunflower trypsin inhibitor SFTI-1, and rhesus Θ-defensin RTD-1. Synthesis of the whole peptide precursor can be fully automated and proceeds without epimerization or dimerization.
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- 2021
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23. Stereoselective Synthesis of the Decahydroquinoline Alkaloid cis-195J
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Christoph Schneider and Rudina Veliu
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chemistry.chemical_classification ,chemistry.chemical_compound ,chemistry ,Bicyclic molecule ,Stereochemistry ,Organic Chemistry ,Diastereomer ,Enantioselective synthesis ,Alkyne ,Stereoselectivity ,Radical cyclization ,Enamine ,Stereocenter - Abstract
The first enantioselective synthesis of two C-5 diastereomers of the proposed structure of the decahydroquinoline alkaloid cis-195J has been achieved. The key step of our strategy is the highly stereoselective vinylogous Mukaiyama-Mannich reaction (VMMR), which gave rise to the first two stereogenic centers at the ring fusion with excellent diastereo- and enantiocontrol. Through alkyne cyclization and enamine reduction the correct cis-configuration between C-2, C-4a, and C-8a in the decahydroquinoline backbone was established. Subsequently, a radical cyclization of a tethered alkyl iodide onto the enoate assembled the bicyclic cis-decahydroquinoline as a mixture of two C-5 diastereomers. Further elaboration of the C-5 side chain eventually provided both diastereomers of cis-195J, which were readily separated, and their constitution and configuration were thus unambiguously proven for the first time.
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- 2021
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24. Cp2TiCl-Mediated Reductive Cyclization: Total Synthesis of Pestalotiolactone A, Myrotheciumone A, and Scabrol A
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Sabnam Begum and Tushar Kanti Chakraborty
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chemistry.chemical_classification ,Bicyclic molecule ,Iridoid ,medicine.drug_class ,Stereochemistry ,Organic Chemistry ,Epoxide ,Total synthesis ,chemistry.chemical_compound ,chemistry ,medicine ,Molecule ,Stereoselectivity ,Deoxygenation ,Lactone - Abstract
The first stereoselective total syntheses of fungal secondary metabolites monoterpenoid (+)-pestalotiolactone A, meroterpenoid (-)-myrotheciumone A, and iridoid lactone (+)-scabrol A have been accomplished in an expedient unified approach starting from d-(+)-malic acid employing an epoxide opening-radical cyclization protocol initiated by Cp2Ti(III)Cl as a key step to assemble the core bicyclic lactone moieties of these molecules with complete diastereoselective control. Finally, the deoxygenation and methylation delivered the target natural products.
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- 2021
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25. Achieving C(sp2)–C(sp3) Coupling with BCP-F2 Building Blocks via Barluenga Coupling: A Comparative Approach
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Xiaoshen Ma and Charles S. Yeung
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Tosylhydrazone ,Coupling ,Pentane ,chemistry.chemical_compound ,Bicyclic molecule ,Chemistry ,Organic Chemistry ,Functional group ,Combinatorial chemistry ,Coupling reaction - Abstract
We report our efforts toward achieving C(sp2)-C(sp3) coupling reactions with 2,2-difluorobicyclo[1.1.1]pentane (BCP-F2) building blocks. By comparing the reactivities of matching pairs of bicyclo[1.1.1]pentane (BCP) and BCP-F2 analogues, we discovered that the Barluenga coupling reaction was the only cross-coupling protocol that translated well between the two structural motifs in contrast to other reported protocols. In this chemistry, a BCP-F2 bearing a tosylhydrazone functional group is cross-coupled with an arylboronic acid. These results further expanded the scope of BCP-F2 building blocks for potential applications in organic chemistry as well as medicinal chemistry.
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- 2021
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26. Polyhalogenated Bicyclo[1.1.1]pentane-1,3-dicarboxylic Acids
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Martin Dračínský, Jiří Kaleta, Thi Phuong Le, Ivana Císařová, Igor Rončević, Veronika Šolínová, and Václav Kašička
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Pentane ,chemistry.chemical_compound ,Capillary electrophoresis ,Relative strain ,Bicyclic molecule ,chemistry ,Computational chemistry ,Organic Chemistry ,Halogen ,Fluorine ,chemistry.chemical_element ,Pentanes ,Acid dissociation constant - Abstract
Herein we report the highly selective radical chlorination of 2,2-difluorobicyclo[1.1.1]pentane-1,3-dicarboxylic acid. Together with radical hydrodechlorination by TMS3SiH, four new bicyclo[1.1.1]pentane cages carrying two fluorine and one to three chlorine atoms in bridge positions have been obtained. The exact positions of all halogen atoms have been confirmed by X-ray diffraction. The acidity constants (pKa) for all new derivatives have been determined by capillary electrophoresis, and these experimental values show excellent agreement with pKas predicted by DFT methods. Extensive DFT calculations have been used to rationalize the selective formation of four out of nine possible F2Cl1-4 isomers of bridge-halogenated bicyclo[1.1.1]pentanes and to obtain relative strain energies for all possible isomers.
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- 2021
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27. Practical Gram-Scale Synthesis of Iboxamycin, a Potent Antibiotic Candidate
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Aditya R. Pote, Jeremy D. Mason, Daniel W. Terwilliger, and Andrew G. Myers
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Models, Molecular ,Bicyclic molecule ,Negishi coupling ,Molecular Conformation ,Stereoisomerism ,General Chemistry ,Alkylation ,Crystallography, X-Ray ,Ring (chemistry) ,Biochemistry ,Combinatorial chemistry ,Catalysis ,Anti-Bacterial Agents ,Stereocenter ,Oxepane ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,chemistry ,Intramolecular force ,Amide ,Oxepins ,Pyrans - Abstract
A gram-scale synthesis of iboxamycin, an antibiotic candidate bearing a fused bicyclic amino acid residue, is presented. A pivotal transformation in the route involves an intramolecular hydrosilylation-oxidation sequence to set the ring-fusion stereocenters of the bicyclic scaffold. Other notable features of the synthesis include a high-yielding, highly diastereoselective alkylation of a pseudoephenamine amide, a convergent sp3-sp2 Negishi coupling, and a one-pot transacetalization-reduction reaction to form the target compound's oxepane ring. Implementation of this synthetic strategy has provided ample quantities of iboxamycin to allow for its in vivo profiling in murine models of infection.
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- 2021
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28. A General Iridium-Catalyzed Reductive Dienamine Synthesis Allows a Five-Step Synthesis of Catharanthine via the Elusive Dehydrosecodine
- Author
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Yaseen A. Almehmadi, Darren J. Dixon, Zeng Rong Wong, and Pablo Gabriel
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Bicyclic molecule ,Communication ,chemistry.chemical_element ,Total synthesis ,Regioselectivity ,General Chemistry ,Catharanthine ,Biochemistry ,Combinatorial chemistry ,Catalysis ,Cycloaddition ,Colloid and Surface Chemistry ,chemistry ,Amine gas treating ,Iridium - Abstract
A new reductive strategy for the stereo- and regioselective synthesis of functionalized isoquinuclidines has been developed. Pivoting on the chemoselective iridium(I)-catalyzed reductive activation of β,γ-unsaturated δ-lactams, the efficiently produced reactive dienamine intermediates readily undergo [4 + 2] cycloaddition reactions with a wide range of dienophiles, resulting in the formation of bridged bicyclic amine products. This new synthetic approach was extended to aliphatic starting materials, resulting in the efficient formation of cyclohexenamine products, and readily applied as the key step in the shortest (five-step) total synthesis of vinca alkaloid catharanthine to date, proceeding via its elusive biosynthetic precursor, dehydrosecodine.
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- 2021
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29. Tropolone-Bearing Sesquiterpenes from Juniperus chinensis: Structures, Photochemistry and Bioactivity
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Hak Cheol Kwon, Jae Sung Park, Silvia Yumnam, Seong-Hwan Kim, Keebeom Ko, Jongheon Shin, Dong-Chan Oh, Jae Kyun Lee, Sun Yeou Kim, Jin-Soo Park, Keunwan Park, Kyungsu Kang, and Mi Ri Kim
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Pharmacology ,Lipid accumulation ,biology ,Bicyclic molecule ,Stereochemistry ,Tyrosinase ,Organic Chemistry ,Pharmaceutical Science ,biology.organism_classification ,Tropolone ,Analytical Chemistry ,chemistry.chemical_compound ,Complementary and alternative medicine ,chemistry ,Drug Discovery ,Juniperus chinensis ,Glycerol ,Extracellular ,Molecular Medicine - Abstract
The tropolone-bearing sesquiterpenes juniperone A (1) and norjuniperone A (2) were isolated from the folk medicinal plant Juniperus chinensis, and their structures were determined by a combination of spectroscopic and crystallographic methods. Photojuniperones A1 (3) and A2 (4), bearing bicyclo[3,2,0]heptadienones derived from tropolone, were photochemically produced and structurally identified by spectroscopic methods. Predicted by the machine learning-based assay, 1 significantly inhibited the action of tyrosinase. The new compounds also inhibited lipid accumulation and enhanced the extracellular glycerol excretion.
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- 2021
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30. Formal Synthesis of (−)-Quinagolide: Diastereoselective Ring Expansion via a Bicyclic Aziridinium Ion Strategy to Access the Octahydrobenzo[g]quinoline Architecture
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Appasaheb L. Kadam, Sanket A. Kawale, Subhash P. Chavan, Mahesh M. Pisal, and Rajesh G. Gonnade
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chemistry.chemical_compound ,Stereospecificity ,Bicyclic molecule ,Chemistry ,Stereochemistry ,Organic Chemistry ,Quinoline ,Quinagolide ,Piperidine ,Lewis acids and bases ,Ring (chemistry) ,Ion - Abstract
The diastereoselective formal synthesis of (-)-quinagolide, a D2 receptor agonist, has been achieved. The synthesis started from l-pyroglutamic acid and relied on utilization of (a) a stereospecific catalytic hydrogenation and diastereoselective Horner-Emmons-Michael cascade to obtain functionalized prolinate, (b) a Lewis acid mediated Pummerer cyclization to construct a tricyclic fused ring system, and (c) a diastereoselective ring expansion via a bicyclic aziridinium intermediate to access the required 3-substituted piperidine scaffold.
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- 2021
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31. Melanocortin 1 Receptor Agonists Based on a Bivalent, Bicyclic Peptide Framework
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Simon J. de Veer, Udo Bauer, Olivier Cheneval, Abdullah A. H. Ahmad Fuaad, Christina I. Schroeder, Niklas Larsson, Laurent Knerr, Joachim Weidmann, Anita Dellsén, David J. Craik, Thomas Durek, Torben Østerlund, Andrew M. White, Alleyn T. Plowright, and Quentin Kaas
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Models, Molecular ,Agonist ,Stereochemistry ,medicine.drug_class ,Context (language use) ,Peptide ,Peptides, Cyclic ,Structure-Activity Relationship ,03 medical and health sciences ,0302 clinical medicine ,Melanocortin receptor ,Drug Discovery ,medicine ,Humans ,Receptor ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,Dose-Response Relationship, Drug ,Molecular Structure ,Bicyclic molecule ,Chemistry ,3. Good health ,030220 oncology & carcinogenesis ,Molecular Medicine ,Melanocortin ,Receptor, Melanocortin, Type 1 ,Melanocortin 1 receptor - Abstract
We have designed a new class of highly potent bivalent melanocortin receptor ligands based on the nature-derived bicyclic peptide sunflower trypsin inhibitor 1 (SFTI-1). Incorporation of melanotropin pharmacophores in each of the two turn regions of SFTI-1 resulted in substantial gains in agonist activity particularly at human melanocortin receptors 1 and 3 (hMC1R/hMC3R) compared to monovalent analogues. In in vitro binding and functional assays, the most potent molecule, compound 6, displayed low picomolar agonist activity at hMC1R (pEC50 > 10.3; EC50 < 50 pM; pKi: 10.16 ± 0.04; Ki: 69 ± 5 pM) and is at least 30-fold more selective for this receptor than for hMC3R, hMC4R, or hMC5R. The results are discussed in the context of structural homology models of hMCRs in complex with the developed bivalent ligands.
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- 2021
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32. Stereoselective Synthesis of (S)- and (N)-Cyclopropyl-Fused Carbocyclic Nucleosides Using Stereoselective Cyclopropanation
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Young Eum Hyun, Lak Shin Jeong, and Hong-Rae Kim
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Hexane ,chemistry.chemical_compound ,Bicyclic molecule ,010405 organic chemistry ,Chemistry ,Cyclopropanation ,Stereochemistry ,Organic Chemistry ,Stereoselectivity ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences - Abstract
To determine which sugar conformation is favorable in binding to peroxisome proliferator-activated receptors, the conformationally locked south (S) and north (N) analogues were asymmetrically synthesized using a bicyclo[3.1.0]hexane template. The (S)-conformer was synthesized by employing "reagent-controlled" Charette asymmetric cyclopropanation in a 100% stereoselective manner, whereas the (N)-conformer was stereoselectively synthesized by using "substrate-controlled" hydroxyl-directed Simmons-Smith cyclopropanation as a key step.
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- 2021
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33. Gold(I)-Catalyzed 7-exo-dig Cyclization: A Key Step to Access the Bicyclo[4.2.1]nonane Skeleton of Vibsatin A, a Neurotrophic Diterpenoid
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Marie-Isabelle Lannou, Janick Ardisson, Geoffroy Sorin, Luca Allievi, Rongyu Sun, Mohamed Selkti, Sabrina Dhambri, Cibles Thérapeutiques et conception de médicaments (CiTCoM - UMR 8038), and Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)-Université de Paris (UP)
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Bicyclic molecule ,[CHIM.ORGA]Chemical Sciences/Organic chemistry ,010405 organic chemistry ,Stereochemistry ,Organic Chemistry ,[CHIM.THER]Chemical Sciences/Medicinal Chemistry ,[CHIM.CATA]Chemical Sciences/Catalysis ,Silyl enol ether ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Terpenoid ,0104 chemical sciences ,Catalysis ,Stereocenter ,chemistry.chemical_compound ,chemistry ,Dig ,Physical and Theoretical Chemistry ,Nonane - Abstract
International audience; Vibsatin A is a new neurotrophic vibsane-type diterpenoid comprising a bridged bicyclo[4.2.1]nonane skeleton. Inspired by Sawamura’s works, we generated the bicyclic backbone through a Conia-ene-derived 7-exo-dig cyclization from an enantiomerically enriched TIPS-based silyl enol ether. The reaction, catalyzed by a sensitive gold(I) complex, was efficiently performed on a large scale by glovebox free techniques. Furthermore, the shape of this system was exploited for subsequent installation of all of the stereogenic centers.
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- 2021
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34. Sinusiaetone A, an Anti-inflammatory Norditerpenoid with a Bicyclo[11.3.0]hexadecane Nucleus from the Hainan Soft Coral Sinularia siaesensis
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Yue-Wei Guo, Zi-Rong Zeng, Zi-Hui Chen, Hai-Yan Zhang, Hui Luo, Bao Chen, Wang-Sheng Li, Xu-Wen Li, Jian-Rong Wang, and Zai-Yong Zhang
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Quantum chemical ,Bicyclic molecule ,biology ,Stereochemistry ,Chemistry ,medicine.drug_class ,Coral ,Organic Chemistry ,Carbon skeleton ,Hexadecane ,biology.organism_classification ,Biochemistry ,Anti-inflammatory ,chemistry.chemical_compound ,medicine.anatomical_structure ,medicine ,Physical and Theoretical Chemistry ,Sinularia ,Nucleus - Abstract
A novel norditerpenoid, sinusiaetone A (1), featuring an uncommon bicyclo[11.3.0]hexadecane carbon skeleton, and four polyoxygenated cembranoids (2-5) were isolated from the Hainan soft coral Sinularia siaesensis. Their structures were established by spectroscopic analysis, X-ray diffraction, quantum chemical computational approaches, and/or a modified Mosher's method. A plausible biosynthetic pathway of 1 and its biogenetic relationship with 2-5 were proposed. New compounds 1-3 displayed an interesting inhibitory activity against lipopolysaccharide-induced inflammation in BV-2 microglial cells.
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- 2021
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35. Nickel-Catalyzed Decarboxylative Cross-Coupling of Bicyclo[1.1.1]pentyl Radicals Enabled by Electron Donor–Acceptor Complex Photoactivation
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Viktor C. Polites, Gary A. Molander, Sebastian Keess, Shorouk O. Badir, and Anais Jolit
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Decarboxylative cross-coupling ,Electrons ,Electron donor ,Pentanes ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Article ,Catalysis ,chemistry.chemical_compound ,Nucleophile ,Nickel ,Physical and Theoretical Chemistry ,Molecular Structure ,Bicyclic molecule ,010405 organic chemistry ,Aryl ,Organic Chemistry ,Esters ,Oxidants ,Combinatorial chemistry ,Acceptor ,Carbon ,0104 chemical sciences ,Propellane ,chemistry ,Oxidation-Reduction - Abstract
The use of bicyclo[1.1.l]pentanes (BCPs) as para-disubstituted aryl bioisosteres has gained considerable momentum in drug development programs. Carbon–carbon bond formation via transition-metal-mediated cross-coupling represents an attractive strategy to generate BCP–aryl compounds for late-stage functionalization, but these typically require reactive organometallics to prepare BCP nucleophiles on demand from [l.1.l]propellane. In this study, the synthesis and Ni-catalyzed functionalization of BCP redox-active esters with (hetero)aryl bromides via the action of a photoactive electron donor–acceptor complex are reported.
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- 2021
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36. GaCl3-Mediated Cascade [2 + 4]-Cycloaddition/[4 + 2]-Annulation of Donor–Acceptor Cyclopropanes with Conjugated Dienes: Strategy for the Construction of Benzobicyclo[3.3.1]nonane Skeleton
- Author
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Roman A. Novikov, Yury V. Tomilov, Daniil A. Knyazev, Denis D. Borisov, and Maria A. Belaya
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Annulation ,Bicyclic molecule ,010405 organic chemistry ,Organic Chemistry ,010402 general chemistry ,01 natural sciences ,Medicinal chemistry ,Cycloaddition ,0104 chemical sciences ,Cyclopropane ,chemistry.chemical_compound ,chemistry ,Gallium trichloride ,Moiety ,Indene ,Nonane - Abstract
Structurally important benzobicyclo[3.3.1]nonane derivatives were synthesized by a gallium trichloride mediated reaction of readily available donor-acceptor cyclopropanes (DACs) with 1,3-dienes as a one-pot cascade ionic [2 + 4]-cycloaddition/Friedel-Crafts-type cyclization process. At the first stage, DACs act as sources of formal gallium 1,2-zwitterionic complexes to give 6-benzylcyclohex-3-ene-1,1-dicarboxylates that are converted under certain conditions in the presence of GaCl3 to give benzobicyclo[3.3.1]nonanes in 30-74% yields. The process is tolerant of varying substituents at different positions of the main framework. Further, potentially useful modifications of benzobicyclo[3.3.1]nonane derivatives are demonstrated. 2-Cyclopropylbutadiene reacts with DAC at higher temperature more deeply with cleavage of three-membered rings in both cyclopropane substrates, and twofold alkylation of the Ph-substituent at ortho- and meta-positions, that leads to a 1,2,7,8,9,10-hexahydro-6H-7,10a-methanocycloocta[cd]indene skeleton. Cyclopropane-1,1-diesters containing a bulky substituent in the ester group react with isoprene in a different way to give bicyclic lactones containing a 2-oxabicyclo[2.2.2]octan-3-one moiety.
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- 2021
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37. Streamlined Synthesis of a Bicyclic Amine Moiety Using an Enzymatic Amidation and Identification of a Novel Solid Form
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Taegyo Lee, Richard A. Wisdom, Amber M. Johnson, Kevin M. Knopf, Giselle P. Reyes, Bryan Li, Ruggeri Sally G, Maria S. Brown, Gerald A. Weisenburger, Lulin Wei, Adam E. Goetz, Cuong V. Lu, Kris N. Jones, Angela L. A. Puchlopek-Dermenci, Michaella A. Caporello, Samir A. Kulkarni, Mengtan Zhang, and Javier Magano
- Subjects
chemistry.chemical_classification ,Enzyme ,Bicyclic molecule ,Chemistry ,Organic Chemistry ,Moiety ,Identification (biology) ,Amine gas treating ,Physical and Theoretical Chemistry ,Combinatorial chemistry - Published
- 2021
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38. Structural Basis for a Dual Function ATP Grasp Ligase That Installs Single and Bicyclic ω-Ester Macrocycles in a New Multicore RiPP Natural Product
- Author
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Carole A. Bewley, Jiadong Sun, Clifton E. Barry, Anastasia N. Nikolskaya, Kira S. Makarova, Dalibor Kosek, Fred Dyda, Brittney Blackburne, Hong-Bing Liu, Gengxiang Zhao, Eugene V. Koonin, and Shannon I. Ohlemacher
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Signal peptide ,Conformational change ,Macrocyclic Compounds ,Stereochemistry ,Molecular Conformation ,Peptide ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Article ,Catalysis ,Ligases ,Residue (chemistry) ,Adenosine Triphosphate ,Colloid and Surface Chemistry ,Side chain ,chemistry.chemical_classification ,Biological Products ,DNA ligase ,Bicyclic molecule ,Substrate (chemistry) ,Esters ,General Chemistry ,Amides ,0104 chemical sciences ,chemistry ,Peptides ,Protein Processing, Post-Translational - Abstract
Among the ribosomally synthesized and post-translationally modified peptide (RiPP) natural products, “graspetides” (formerly known as microviridins) contain macrocyclic esters and amides that are formed by ATP-grasp ligase tailoring enzymes using the side chains of Asp/Glu as acceptors and Thr/Ser/Lys as donors. Graspetides exhibit diverse patterns of macrocylization and connectivities exemplified by microviridins, that have a caged tricyclic core, and thuringin and plesiocin that feature a “hairpin topology” with cross-strand ω-ester bonds. Here, we characterize chryseoviridin, a new type of multicore RiPP encoded by Chryseobacterium gregarium DS19109 (Phylum Bacteroidetes) and solve a 2.44 Å resolution crystal structure of a quaternary complex consisting of the ATP-grasp ligase CdnC bound to ADP, a conserved leader peptide and a peptide substrate. HRMS/MS analyses show that chryseoviridin contains four consecutive five- or six-residue macrocycles ending with a microviridin-like core. The crystal structure captures respective subunits of the CdnC homodimer in the apo or substrate-bound state revealing a large conformational change in the B-domain upon substrate binding. A docked model of ATP places the γ-phosphate group within 2.8 Å of the Asp acceptor residue. The orientation of the bound substrate is consistent with a model in which macrocyclization occurs in the N- to C-terminal direction for core peptides containing multiple Thr/Ser-to-Asp macrocycles. Using systematically varied sequences, we validate this model and identify two- or three-amino acid templating elements that flank the macrolactone and are required for enzyme activity in vitro. This work reveals the structural basis for ω-ester bond formation in RiPP biosynthesis.
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- 2021
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39. Selective Synthesis of Acylated Cross-Benzoins from Acylals and Aldehydes via N-Heterocyclic Carbene Catalysis
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Kou Onodera, Yumiko Suzuki, and Ryo Takashima
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chemistry.chemical_classification ,Base (chemistry) ,Bicyclic molecule ,010405 organic chemistry ,Organic Chemistry ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Aldehyde ,0104 chemical sciences ,Catalysis ,Potassium carbonate ,chemistry.chemical_compound ,chemistry ,Organic chemistry ,lipids (amino acids, peptides, and proteins) ,Physical and Theoretical Chemistry ,Carbene - Abstract
The utility of acylals as building blocks for selective cross-benzoin synthesis was explored in this study. The synthesis of α-acetoxyketones (O-acyl cross-benzoins) was achieved via selective N-heterocyclic carbene-catalyzed cross-benzoin reactions using acylals as aldehyde equivalents. Thus, the combination of ortho-substituted phenyl acylals and aromatic/aliphatic aldehydes as coupling substrates using bicyclic triazolium salts as precatalysts and potassium carbonate as a base in THF at reflux temperature selectively yielded O-acyl cross-benzoins.
- Published
- 2021
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40. Cu-Catalyzed [1,3]-Alkoxy Rearrangement/Diels–Alder Cascade Reactions via in Situ Generation of Functionalized ortho-Quinol Imines
- Author
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Masahiro Terada, Itaru Nakamura, Yasuhiro Ishida, and Kazuki Masukawa
- Subjects
Bicyclic molecule ,010405 organic chemistry ,Organic Chemistry ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Medicinal chemistry ,0104 chemical sciences ,Catalysis ,Styrene ,chemistry.chemical_compound ,chemistry ,Cascade reaction ,Functional group ,Alkoxy group ,Stereoselectivity ,Physical and Theoretical Chemistry ,Indene - Abstract
A Cu-catalyzed cascade reaction between N-alkoxyanilines having an electron-donating functional group at the ortho position and dienophiles, such as N-methylmaleimide, styrene, and indene, proceeded via a dearomative [1,3]-alkoxy rearrangement followed by the Diels-Alder reaction, affording the corresponding ketimines with highly functionalized bicyclic skeletons in an efficient and stereoselective manner. Our mechanistic investigations indicated that the [1,3]-rearrangement is the rate-determining process, efficiently suppressing unfavorable side reactions.
- Published
- 2021
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41. Synergistic Pd(0)/Rh(II) Dual Catalytic [6 + 3] Dipolar Cycloaddition for the Synthesis of Monocyclic Nine-Membered N,O-Heterocycles and Their Alder-ene Rearrangement to Fused Bicyclic Compounds
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Sang‐gi Lee, Kyu Ree Lee, and Subin Ahn
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inorganic chemicals ,Bicyclic molecule ,010405 organic chemistry ,Organic Chemistry ,chemistry.chemical_element ,010402 general chemistry ,Ring (chemistry) ,01 natural sciences ,Biochemistry ,Medicinal chemistry ,Cycloaddition ,0104 chemical sciences ,Catalysis ,Rhodium ,chemistry.chemical_compound ,chemistry ,Organic synthesis ,Physical and Theoretical Chemistry ,Ene reaction ,Palladium - Abstract
The catalytic construction of a monocyclic medium-sized N,O-heterocyclic ring represents a formidable challenge in organic synthesis. Herein we report the synergistic palladium(0)/rhodium(II) dual ...
- Published
- 2021
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42. Three Pairs of Enantiomeric Sesquiterpenoids from Syringa pinnatifolia
- Author
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Guozhu Su, Bing Peng, Shun-Gang Jiao, Suyile Chen, Luqi Huang, Xiao-Chun Zhou, Ruifei Zhang, Pengfei Tu, Xingyun Chai, Fu-Xing Ge, and Chang-Xin Liu
- Subjects
Quantum chemical ,Bicyclic molecule ,010405 organic chemistry ,Stereochemistry ,Chemistry ,Organic Chemistry ,Stereoisomerism ,Syringa pinnatifolia ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences ,Biotransformation ,Molecule ,Enantiomer - Abstract
Three pairs of enantiomeric sesquiterpenoids, (∓)-syringanoid A (1a and 1b) and (±)-pinnatanoids A (2a and 2b) and B (3a and 3b), that represent an unprecedented 5/4/6 tricyclic backbone and a rare 6/7 bicyclic backbone, respectively, were isolated from the peeled stems of Syringa pinnatifolia. The structures were elucidated by extensive spectroscopic analysis, single-crystal X-ray diffraction, a modified Mosher's method, and quantum chemical calculations. A plausible biotransformation pathway for 1-3 was proposed, and their cardiomyocyte-protective and anti-inflammatory activities were evaluated.
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- 2021
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43. Aerobic Copper-Catalyzed Intramolecular Cascade Oxidative Isomerization/[4+4] Cyclization of 2,2′-Disubstituted Stilbenes
- Author
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Wen-Wen Xiao, Zhi-Jun Zhang, Xu Zhou, Dashan Li, Li-Dong Shao, Yang Chen, and Rong-Tao Li
- Subjects
Bicyclic molecule ,Chemistry ,Cascade ,Intramolecular force ,Organic Chemistry ,Copper catalyzed ,Density functional theory ,Oxidative phosphorylation ,Isomerization ,Medicinal chemistry ,Catalysis - Abstract
An aerobic copper-catalyzed cascade oxidative isomerization/[4+4] cyclization of 2,2'-disubstituted stilbenes is described. Under the mild CuCl/DBED/air catalytic system, various 5,10-heteroatom-containing tetrahydroindeno[2,1-a]indenes were efficiently prepared through the difunctionalizations of alkenes in a highly atom economic manner. Mechanistic investigations suggested the bicyclic product was likely formed through a sequence of rapid single-electron oxidation/[4+4] cyclization from 2,2'-disubstituted stilbene. The antarafacial manner of the thermally allowed [4+4] cyclization was further proven by series of control experiments and density functional theory calculations. Our findings provide an important addition to the aerobic copper-catalyzed oxidative cyclization.
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- 2021
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44. Hypaluton A, an Immunosuppressive 3,4-nor-Polycyclic Polyprenylated Acylphloroglucinol from Hypericum patulum
- Author
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Weiguang Sun, Yun Guo, Yi Guo, Yonghui Zhang, Yulin Duan, Yunfang Cao, Pengfei Bu, Changxing Qi, Shuangshuang Xie, and Zhengyi Shi
- Subjects
Circular dichroism ,Bicyclic molecule ,biology ,010405 organic chemistry ,Stereochemistry ,Organic Chemistry ,Phloroglucinol ,Nuclear magnetic resonance spectroscopy ,Hypericum patulum ,Carbon-13 NMR ,010402 general chemistry ,biology.organism_classification ,01 natural sciences ,0104 chemical sciences ,chemistry.chemical_compound ,chemistry ,Molecule ,Hypericum - Abstract
Hypaluton A (1), an unprecedented nor-polycyclic polyprenylated acylphloroglucinol (PPAP) bearing a new 8/6 bicyclic architecture, along with a new congener, hypaluton B (2), was obtained from Hypericum patulum. Their structures were confirmed by spectroscopic analyses, quantum-chemical 13C NMR calculations, electronic circular dichroism comparisons, and calculations. Hypaluton A is the first PPAP possessing an unparalleled 3,4-nor-bicyclic polyprenylated acylphloroglucinol (BPAP) scaffold, which might be derived from the common [5.3.1]-type-BPAP by losing seven carbons (C-3/4 of the acylphloroglucinol core and the isoprenyl at C-3) via the breakage at C-4-C-5 and C-2-C-3 bonds in the acylphloroglucinol core, together with the benzoyl migration through the hemiketalization/retro-Claisen cascade. More significantly, compound 1 is also the first discovered [6.3.0]-PPAP, which displayed pronounced inhibitory activity against lipopolysaccharide-induced B lymphocyte proliferation.
- Published
- 2021
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45. Au(I)/(R)-BINOL–Ti(IV) Concerted Catalyzed Asymmetric Cascade Cycloaddition Reaction of Arylalkynols
- Author
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Tianlong Zeng, Lingyan Liu, Weixing Chang, Jing Li, and Hongkai Wang
- Subjects
Bicyclic molecule ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Medicinal chemistry ,Cycloaddition ,0104 chemical sciences ,Catalysis ,Stereocenter ,Cascade ,Yield (chemistry) ,Physical and Theoretical Chemistry ,Bimetallic strip - Abstract
An efficient catalytic asymmetric cascade cycloaddition reaction of arylalkynols with dioxopyrrolidines was developed. This reaction was achieved using Au(I) and (R)-BINOL-Ti(IV) bimetallic catalysts and exclusively delivered a series of chiral oxo-bridged bicyclic benzooxacine compounds in up to 86% yield with 96% ee as well as >33:1 dr. Meanwhile, three new σ bonds and three new stereogenic centers were formed in a one-pot process.
- Published
- 2021
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46. Total Synthesis of Viridiofungins A and B
- Author
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Jonathan M. White, Mark A. Rizzacasa, Liselle Atkin, and Angus Robertson
- Subjects
chemistry.chemical_classification ,Cyclobutene ,Bicyclic molecule ,010405 organic chemistry ,Alkene ,Stereochemistry ,Organic Chemistry ,Total synthesis ,010402 general chemistry ,Metathesis ,01 natural sciences ,Biochemistry ,3. Good health ,0104 chemical sciences ,chemistry.chemical_compound ,chemistry ,Amide ,Physical and Theoretical Chemistry ,Isomerization ,Lactone - Abstract
The total synthesis of viridiofungins A (1) and B (2) via β-lactone 3 in 13 steps is reported. Key steps included an HF-mediated rearrangement of cyclobutene diester 9 to form a bicyclic lactone 6, an olefin cross metathesis between disubstituted alkene 3 and alkene 4 in which isomerization was suppressed, and a novel β-lactone ring opening to form the amide. Deprotection then gave either viridiofungin A (1) or B (2) in high yield.
- Published
- 2021
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47. Dumulmycin, an Antitubercular Bicyclic Macrolide from a Riverine Sediment-Derived Streptomyces sp
- Author
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Young Eun Du, Sang Jip Nam, Jinsheng Cui, Yeo Joon Yoon, Jichan Jang, Tae Ho Kim, Dong-Chan Oh, Joon Soo An, Bora Shin, Jongheon Shin, Jungwoo Yi, Suckchang Hong, Sunghoon Hwang, and Yern Hyerk Shin
- Subjects
biology ,Bicyclic molecule ,010405 organic chemistry ,Chemistry ,Stereochemistry ,Organic Chemistry ,Sediment ,010402 general chemistry ,biology.organism_classification ,01 natural sciences ,Biochemistry ,Streptomyces ,Nmr data ,Bacterial strain ,0104 chemical sciences ,Configuration analysis ,Polyketide ,Gene cluster ,Physical and Theoretical Chemistry - Abstract
Dumulmycin (1) was isolated from Streptomyces sp. DM28, a bacterial strain from a riverine sediment sample. The structure of 1 was elucidated as a bicyclic macrolide possessing 19-membered and 5-membered rings by spectroscopic analysis. The stereochemistry of 1 was determined by J-based configuration analysis, ROESY NMR data, DP4 calculations, and the modified Mosher's method. Genetic analysis identified a trans-acyltransferase polyketide biosynthetic gene cluster for 1. Dumulmycin exhibited in vitro antitubercular activity (MIC50 = 27.1 μM).
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- 2021
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48. Enantioselective Total Synthesis of Cerorubenic Acid-III via Type II [5+2] Cycloaddition Reaction
- Author
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Xin Liu, Chuang-Chuang Li, Jianlei Wu, and Junyang Liu
- Subjects
chemistry.chemical_classification ,Cycloaddition Reaction ,Double bond ,Bicyclic molecule ,Organic Chemistry ,Enantioselective synthesis ,Sodium naphthalenide ,Total synthesis ,Stereoisomerism ,Medicinal chemistry ,Cycloaddition ,chemistry.chemical_compound ,chemistry ,Cyclization ,Moiety ,Octene - Abstract
The first enantioselective total synthesis of cerorubenic acid-III is described in detail. Different strategies and attempts, based on a type II [5+2] cycloaddition reaction, leading to the bicyclo[4.4.1] ring system with a strained bridgehead double bond, are depicted. Furthermore, sodium naphthalenide was found to be efficient in the chemoselective reduction of 8-oxabicyclo[3.2.1]octene, with three transformations completed in one operation. An unusual SN1 transannular cyclization reaction was applied to construct the synthetically challenging vinylcyclopropane moiety. This strategy enabled the total synthesis of cerorubenic acid-III in 19 steps.
- Published
- 2021
- Full Text
- View/download PDF
49. Marriage of Peroxides and Nitrogen Heterocycles: Selective Three-Component Assembly, Peroxide-Preserving Rearrangement, and Stereoelectronic Source of Unusual Stability of Bridged Azaozonides
- Author
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Peter S. Radulov, Yulia Yu. Belyakova, Alexander O. Terent'ev, Michael G. Medvedev, Igor V. Alabugin, Nikolai V. Krivoshchapov, Alexander A. Korlyukov, Roman A. Novikov, and Ivan A. Yaremenko
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Bicyclic molecule ,Amine alkylation ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Peroxide ,Catalysis ,0104 chemical sciences ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,chemistry ,Nucleophile ,Amide ,Polymer chemistry ,Moiety ,Amine gas treating ,Hydrogen peroxide - Abstract
Stable bridged azaozonides can be selectively assembled via a catalyst-free three-component condensation of 1,5-diketones, hydrogen peroxide, and an NH-group source such as aqueous ammonia or ammonium salts. This procedure is scalable and can produce gram quantities of bicyclic stereochemically rich heterocycles. The new azaozonides are thermally stable and can be stored at room temperature for several months without decomposition and for at least 1 year at -10 °C. The chemical stability of azaozonides was explored for their subsequent selective transformations including the first example of an aminoperoxide rearrangement that preserves the peroxide group. The amino group in aminoperoxides has remarkably low nucleophilicity and does not participate in the usual amine alkylation and acylation reactions. These observations and the 15 pKa units decrease in basicity in comparison with a typical dialkyl amine are attributed to the strong hyperconjugative nN→σ*C-O interaction with the two antiperiplanar C-O bonds. Due to the weakness of the complementary nO→σ*C-N donation from the peroxide oxygens (a consequence of "inverse α-effect"), this interaction depletes electron density from the NH moiety, protects it from oxidation, and makes it similar in properties to an amide.
- Published
- 2021
- Full Text
- View/download PDF
50. Semipinacol-Type Rearrangements of [3-(Arylsulfonyl)bicyclo[1.1.0]butan-1-yl]alkanols
- Author
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Michael J. Kerner and Peter Wipf
- Subjects
Bicyclic molecule ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,Difluoride ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Medicinal chemistry ,0104 chemical sciences ,Semipinacol rearrangement ,Yield (chemistry) ,Physical and Theoretical Chemistry ,Chemoselectivity - Abstract
Selective lithiation of arylsulfonylbicyclo[1.1.0]butanes at the bridgehead methine and addition to carbonyl compounds yield tertiary bicyclobutyl alcohols that form spiro[3.4]octanes and related heteroatom-containing spirocycles via an acid- or halogen-mediated semipinacol rearrangement. Further synthetic transformations at the carbonyl or arylsulfone positions, in general in high yield and good chemoselectivity, allow access to acetals, difluorides, amides, and methylenecyclobutene building blocks.
- Published
- 2021
- Full Text
- View/download PDF
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