12 results on '"Daiki Murakami"'
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2. Effect of Osmolytes on Water Mobility Correlates with Their Stabilizing Effect on Proteins
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Mafumi Hishida, Rubaiya Anjum, Takahisa Anada, Daiki Murakami, and Masaru Tanaka
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Protein Denaturation ,Temperature ,Materials Chemistry ,Proteins ,Thermodynamics ,Water ,Molecular Dynamics Simulation ,Physical and Theoretical Chemistry ,Surfaces, Coatings and Films - Abstract
There is a long, ongoing debate on how small molecules (osmolytes) affect the stability of proteins. The present study found that change in collective rotational dynamics of water in osmolyte solutions likely has a dominant effect on protein denaturation. According to THz spectroscopy analysis, osmolytes that stabilize proteins are accompanied by bound hydration water with slow dynamics, while the collective rotational dynamics of water is accelerated in the case of denaturant osmolytes. Among 15 osmolytes studied here, there is a good correlation between the change in mobility in terms of water rotational dynamics and the denaturation temperature of ribonuclease A. The changes in water dynamics due to osmolytes can be regarded as a pseudo-temperature-change, which agrees well with the change in protein denaturation temperature. These results indicate that the molecular dynamics of water around the protein is a key factor for protein denaturation.
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- 2022
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3. Experimental Evidence of Slow Mode Water in the Vicinity of Poly(ethylene oxide) at Physiological Temperature
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Taiki Tominaga, Mafumi Hishida, Daiki Murakami, Yoshihisa Fujii, Masaru Tanaka, and Hideki Seto
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Ethylene Oxide ,Polymers ,Temperature ,Materials Chemistry ,Water ,Physical and Theoretical Chemistry ,Polyethylene Glycols ,Surfaces, Coatings and Films - Abstract
In some synthetic polymers used for medical applications, hydration water in the vicinity of the polymer chains is known to play an important role in biocompatibility and is referred to as intermediate water. The crystallization of water below 0 °C observed during thermal analysis has been considered as evidence of the presence of intermediate water. However, the origin and physicochemical properties of intermediate water have not yet been elucidated. In this study, as a typical biocompatible polymer, poly(ethylene oxide) and its hydration water were investigated with the use of terahertz time-domain spectroscopy and quasi-elastic neutron scattering. The obtained results prove the existence of a significant amount of mobile water that interacts with the polymer chains even when the water content is low at physiological temperatures.
- Published
- 2022
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4. Effect of Branching Degree of Dendritic Polyglycerols on Plasma Protein Adsorption: Relationship between Hydration States and Surface Morphology
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Masaru Tanaka, Daiki Murakami, Tooru Ooya, Yosuke Sugimoto, and Moe Yamazaki
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Glycerol ,Polymers ,Surface Properties ,Chemistry ,Fibrinogen ,Substrate (chemistry) ,Surfaces and Interfaces ,respiratory system ,Condensed Matter Physics ,Branching (polymer chemistry) ,Human serum albumin ,Adsorption ,Vroman effect ,Dendrimer ,Electrochemistry ,Surface roughness ,medicine ,Biophysics ,Humans ,Molecule ,lipids (amino acids, peptides, and proteins) ,General Materials Science ,Spectroscopy ,medicine.drug - Abstract
This study focuses on dendritic glycerols and investigates the construction of biocompatible surfaces by understanding how differences in the branching of these molecules change the interactions with the biological components. The two molecules, polyglycerol dendrimer (PGD), which has a completely branched structure, and hyperbranched polyglycerol (HPG), which has an incompletely branched structure, are compared and the differences in branching are evaluated. It is shown that PGD has a little bit more intermediate water than HPG, which reflects the differences in the branching. The effect of surface state on the adsorption of the plasma proteins, human serum albumin (HSA), fibrinogen (Fib), and fibronectin (FN), is discussed by modifying a glass surface using these molecules with different hydration states. The adsorption of HSA decreases to several percent for HPG and 10% for PGD compared to unmodified substrate. Although the adsorption of Fib decreases to 5% for HPG, an increase to 150% is observed for PGD. Since this specific Fib adsorption observed only onto PGD is suppressed in the cases of a mixed solution of HSA and Fib or sequentially using HSA solution and then Fib solution, it is thought that the Vroman effect is suppressed on the PGD-modified surface. Furthermore, when AFM measurements are performed in PBS to understand the surface roughness, PGD is found to be more highly non-uniform. Because of this, the nanometer scale roughness that is significantly observed only on the PGD-modified surface is thought to have an effect on the characteristic adsorption properties of Fib. Thus, although both PGD and HPG with different branching have intermediate water, the proportion differs between PGD and HPG. Therefore, it is found that differences occur in the plasma protein adsorption mechanisms depending on the coordinates and density of hydroxyl groups within the molecules.
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- 2021
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5. First Observation of the Hydration Layer around Polymer Chain by Scattering and Its Relationship to Thromboresistance: Dilute Solution Properties of PMEA in THF/Water
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Masaru Tanaka, Rintaro Takahashi, Kazuo Sakurai, Shota Fujii, Daiki Murakami, Masataka Araki, Toshiyuki Shikata, and Takuma Kanamaru
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Materials science ,Polymers ,010402 general chemistry ,01 natural sciences ,chemistry.chemical_compound ,X-Ray Diffraction ,Scattering, Small Angle ,0103 physical sciences ,Materials Chemistry ,Physical and Theoretical Chemistry ,Furans ,Tetrahydrofuran ,chemistry.chemical_classification ,010304 chemical physics ,Small-angle X-ray scattering ,Solvation ,Water ,Polymer ,0104 chemical sciences ,Surfaces, Coatings and Films ,Solvent ,Acrylates ,chemistry ,Sedimentation equilibrium ,Excluded volume ,Physical chemistry ,Polystyrene - Abstract
Poly(2-methoxyethyl acrylate) (PMEA) is known to exhibit excellent thromboresistance, i.e., hardly causing blood-clot formation on its surface. Hence, PMEA and its analogues have been commercially used for blood-contacting materials in medical devices. In this study, we investigated the conformation and solvation state of PMEA in mixtures of tetrahydrofuran (THF) and water with various water volume fractions (ϕwater) by viscosity, sedimentation equilibrium, small-angle X-ray scattering (SAXS), and dielectric relaxation measurements. We also comparatively investigated those of poly[2-(2-methoxyethoxy)ethyl methacrylate] (PMe2MA) and polystyrene (PS). For all of these, THF is a good solvent and water is a nonsolvent or poor solvent. PMe2MA and PMEA show equally good thromboresistance, while PS does not at all. The solution properties of PMe2MA and PMEA were found to be quite different from PS. There are clear attractive interactions (or correlation) between the PMEA chain (or PMe2MA) and the waters in the vicinity of the chain despite their water insolubility. These correlated waters give additional scattering and the angular dependence of SAXS was analyzed in terms of the hydration layer model that has been used in protein solution scattering. The hydration is related to increasing both the chain stiffness and excluded volume. These distinctive properties are likely related to the origin of its good thromboresistance.
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- 2021
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6. Alcohol-Soluble Cross-Linked Poly(nBA)n-b-Poly(NVTri)m Block Copolymer and Its Applications in Organic Photovoltaic Cells for Improved Stability
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Kai-Ting Huang, Chen-Tsyr Lo, Ryosuke Kanto, Chu-Chen Chueh, Daiki Murakami, Wen-Chang Chen, Chien-Chung Shih, Hideharu Mori, and Hsin-Yu Liu
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Acrylate ,Materials science ,Organic solar cell ,Energy conversion efficiency ,Ionic bonding ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,Indium tin oxide ,Solvent ,chemistry.chemical_compound ,Chemical engineering ,chemistry ,Copolymer ,General Materials Science ,Work function ,0210 nano-technology - Abstract
In this study, a series of alcohol-soluble cross-linked block copolymers (BCPs) consisting of poly(n-butyl acrylate) (poly(nBA)) and poly(N-vinyl-1,2,4-triazole) (poly(NVTri)) blocks with different individual functions and lengths are designed and developed. These presynthesized cross-linked BCPs (PBAn–Trim) were, for the first time, revealed to exhibit many advantages in serving as the electron-extraction layer (EEL) for organic photovoltaics (OPVs). The cross-linked BCPs possessed intense ionic functionality, showing well capability to form effective interfacial dipoles at the indium tin oxide interface to facilitate the charge extraction at the corresponding interface. Furthermore, it also consisted a core–shell structure, wherein the polar poly(NVTri) core was well protected by the poly(nBA) shell to endow improved robustness against solvent erosion and thermal/photo inputs. Consequently, the PBA70–Tri30 device yielded a decent power conversion efficiency of 8.03% with a Voc of 0.83 V, much exceeding ...
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- 2018
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7. Direct Characterization of In-Plane Phase Separation in Polystyrene Brush/Cyclohexane System
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Hiroshi Jinnai, Atsushi Takahara, Yuki Norizoe, Yuji Higaki, and Daiki Murakami
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Binodal ,Materials science ,Polymers and Plastics ,Cyclohexane ,Organic Chemistry ,Lipid microdomain ,Analytical chemistry ,Substrate (chemistry) ,Brush ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,law.invention ,Inorganic Chemistry ,chemistry.chemical_compound ,chemistry ,Upper critical solution temperature ,law ,Phase (matter) ,Polymer chemistry ,Materials Chemistry ,Polystyrene ,0210 nano-technology - Abstract
The phase behavior of polystyrene (PS) brushes in cyclohexane (CHX) was investigated, for the first time, by environmental atomic force microscopy as a function of the graft density and temperature. The polystyrene brushes of three different graft densities exhibited island-, bicontinuous-, and hole-shape microdomains in the direction parallel to the substrate. The size of such “in-plane” microdomains is close to the end-to-end distance of PS brush chain due to the anchoring of one of the chain ends of PS brushes to the substrate. The microdomain structure disappeared as the temperature increased, and new structure with same morphological features reappeared by lowering temperature. This reversible temperature response corresponds to the in-plane phase separation of the PS brush/CHX system. The UCST type binodal line shifted toward slightly lower temperature in the PS brush/CHX system compared to that of the corresponding nongrafted polymer solution, i.e., PS/CHX system, in excellent agreement with our pr...
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- 2016
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8. Thermosensitive Polymer Biocompatibility Based on Interfacial Structure at Biointerface
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Yoko Kitahara, Shingo Kobayashi, Daiki Murakami, and Masaru Tanaka
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chemistry.chemical_classification ,Materials science ,Biocompatibility ,Biomedical Engineering ,Biointerface ,02 engineering and technology ,Polymer ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Methacrylate ,01 natural sciences ,Lower critical solution temperature ,0104 chemical sciences ,Biomaterials ,Chemical engineering ,chemistry ,Nanometre ,0210 nano-technology ,Cell adhesion ,Protein adsorption - Abstract
The interfacial structure of a thermosensitive biocompatible polymer, poly[2-(2-methoxyethoxy)ethyl methacrylate] (PMe2MA), at the polymer/phosphate-buffered saline (PBS) interface was investigated by atomic force microscopy. A number of nanometer scale protrusions appeared at 37 °C and disappeared at 22 °C, reversibly. This structural change occurred above the lower critical solution temperature of PMe2MA in PBS (19 °C), indicating that the formation of protrusions was explained by the microphase separation of polymer and water at the interfacial region. The protein adsorption and platelet adhesion onto PMe2MA interface were drastically restrained at 22 °C compared to that at 37 °C. Detachment of NIH3T3 cells accompanied by the dissipation of protrusions on the PMe2MA interface was also demonstrated. These results indicate that the protrusions act as the scaffold for the protein adsorption and cell adhesion.
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- 2018
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9. Spreading and Structuring of Water on Superhydrophilic Polyelectrolyte Brush Surfaces
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Atsushi Takahara, Daiki Murakami, Yuka Ikemoto, Motoyasu Kobayashi, Hiroshi Jinnai, and Taro Moriwaki
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Materials science ,Hydrogen bond ,Nanotechnology ,Surfaces and Interfaces ,Condensed Matter Physics ,Electrochemistry ,Polyelectrolyte ,Contact angle ,Chemical engineering ,Superhydrophilicity ,Molecule ,General Materials Science ,Wetting ,Thin film ,Spectroscopy - Abstract
The wetting behavior of superhydrophilic polyelectrolyte brushes was investigated. Reflection interference contrast microscopy demonstrated that the contact angles of water on the polyelectrolyte brushes were extremely low but remained finite in the range of
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- 2013
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10. Molecular Orientation and Multilayer Formation in the Adsorbed Film of 1H,1H,10H,10H-Perfluorodecane-1,10-diol at the Hexane/Water Interface; Temperature Effect on the Adsorption of Fluoroalkane-diol
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Makoto Aratono, Takanori Takiue, Tsubasa Fukuda, Hideaki Inomata, Hiroyasu Sakamoto, Daiki Murakami, and Hiroki Matsubara
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Phase transition ,Standard molar entropy ,Hydrogen bond ,Diol ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Surface tension ,chemistry.chemical_compound ,General Energy ,Adsorption ,chemistry ,Monolayer ,Physical chemistry ,Organic chemistry ,Fluorocarbon ,Physical and Theoretical Chemistry - Abstract
The adsorption of lH,lH,10H,10H-perfluorodecane-1,10-diol (FC 10 diol) at the hexane/water interface was investigated by the measurement of temperature dependence of interfacial tension and the thermodynamic data analysis in order to know the effect of two hydroxyl groups at both ends of the hydrophobic chain and the rigidity of the hydrophobic chain on the adsorption of fluorocarbon alcohol at the interface. The curves of interfacial tension versus temperature and concentration show break points corresponding to the phase transitions in the adsorbed FC 10 diol film. The interfacial pressure versus mean area per adsorbed molecule curve shows three kinds of states connected by two discontinuous changes. The area value after the first phase transition is very close to the calculated cross-sectional area of the FC 10 diol molecule along its major axis, and thus the FC 10 diol molecules form a condensed monolayer with molecular orientation parallel to the interface. Another noticeable point is that the value after the second phase transition point decreases furthermore to 0.12 nm 2 , which is much smaller than the cross-sectional area of the fluorocarbon chain, 0.28 nm 2 , with increasing interfacial pressure. This suggests that FC 10 diol molecules pile spontaneously and successively form a multilayer above the second phase transition. Furthermore, the partial molar entropy and energy change of adsorption in the expanded and condensed states were evaluated and compared to those of 1H,1H,2H,-2H-perfluorodecanol (TFC 10 OH), which orients almost perpendicular to the interface. In addition to the contact of two hydroxyl groups with hexane in the bulk solution, the results are explained by the dependence of partial molar entropy and energy at the interface on the following factors resulting from the parallel orientation of FC 10 diol at the interface; (a) hydrogen bonding of two hydroxyl groups with water molecules, (b) hydrogen bonding between two hydroxyl groups facing each other, and (c) the fluorocarbon chain-water contact. The adsorbed FC 10 diol film is stabilized by factors a and b, which overwhelm the energetic disadvantage caused by factor c. Furthermore, the entropy change of adsorption As in the multilayer is compared to the Δs cal calculated on the assumption that the condensed monolayer piles to form the multilayer. It was suggested that FC 10 diol molecules are not so densely packed in the multilayer compared to the first condensed monolayer and therefore the multilayer is not simply formed by the piling of condensed monolayers.
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- 2008
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11. Effect of the Partial Hydrogenation of Hydrophobic Chains on the Mixing of Fluoroalkanols in an Adsorbed Film at the Hexane/Water Interface
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Takenori Fukuta, Takanori Takiue, Makoto Aratono, Daiki Murakami, and Hiroki Matsubara
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Thermodynamics ,Interaction energy ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Gibbs free energy ,Surface tension ,Hexane ,symbols.namesake ,chemistry.chemical_compound ,General Energy ,Adsorption ,chemistry ,symbols ,Molecule ,Organic chemistry ,Physical and Theoretical Chemistry ,Dispersion (chemistry) ,Phase diagram - Abstract
The mixed adsorbed film of lH,lH-perfluorooctanol (DFC 8 OH) and lH,lH,2H,2H-perfluorodecanol (TFC 10 OH) at the hexane/water interface was studied on the basis of interfacial tension measurement and its thermodynamic data analysis. An adsorbed film at any composition of the mixed system as well as those of pure DFC 8 OH and TFC 10 OH systems exhibits three states: the gaseous, expanded, and condensed states. Construction of the phase diagram of adsorption clarified that DFC 8 OH and TFC 10 OH mix almost ideally in the gaseous and expanded states. On the contrary, the excess Gibbs energy of adsorption g H,E value evaluated in the condensed state was positive. These results are explained by considering the following two factors: (1) The mixing of binary alcohols is accompanied by the loss of dispersion interaction energy due to the difference in extent of fluorination of hydrophobic chains and in their chain length and increases the g H,E value. (2) Since the interchange energy concerning the interaction between dipoles with different dipole moments is negative, the mixing of these alcohols reduces the repulsive force between hydrophilic groups and thus leads to a decrease in the g H,E value. In the gaseous and expanded states, both of above two factors are not effective. On the other hand, the positive g H,E value in the condensed state is attributable to more effective dispersion interaction than the dipole-dipole interaction in short molecular distance, and so factor 1 becomes dominant. Comparison of the g H,E value of the present system with that of the homologous TFC 10 OH-TFC 12 OH mixture leads us to a conclusion that the hydrogenation on /?-carbons in hydrophobic chains affects appreciably the balance of interactions between hydrophilic and hydrophobic groups which governs the mixing of molecules in adsorbed films.
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- 2008
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12. Effect of ω-Hydrogenation on the Adsorption of Fluorononanols at the Hexane/Water Interface: Pressure Effect on the Adsorption of Fluorononanols
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Hiroyasu Sakamoto, Daiki Murakami, Daisuke Hirose, Makoto Aratono, Hiroki Matsubara, and Takanori Takiue
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Phase transition ,Standard molar entropy ,Atmospheric pressure ,Chemistry ,Analytical chemistry ,Surfaces, Coatings and Films ,Hexane ,chemistry.chemical_compound ,Adsorption ,Computational chemistry ,Materials Chemistry ,Molecule ,A value ,Physical and Theoretical Chemistry ,Entropy (order and disorder) - Abstract
The interfacial tensions (y) of the hexane solutions of 1H,1H-perfluorononanol (FDFC 9 OH) and its ω-hydrogenated analogue 1H,1H,9H-perfluorononanol (HDFC 9 OH) against water were measured as a function of temperature and concentration under atmospheric pressure in order to know the effect of ω-dipoles on the adsorption behavior of fluorononanols. The interfacial pressure (n) versus mean area per adsorbed molecule (A) curves consist of two discontinuous changes among three different states: the gaseous, expanded, and condensed states. The A values at given π in the gaseous and expanded states are larger for HDFC 9 OH than for FDFC 9 OH. The changes in partial molar entropy (s H 1 - s O 1 ) and energy (u H 1 - u O 1 ) of adsorption were evaluated. Their values are negative, and therefore, the alcohols have a smaller entropy and energy at the interface than in the bulk solution. Furthermore, the u H 1 - u O 1 value is more negative for HDFC 9 OH than for FDFC 9 OH in the expanded state and also in the condensed film just above the expanded-condensed phase transition point. This seems to be due to the following: (1) HDFC 9 OH may tilt from interface normal for ω-dipoles to interact effectively with water molecules in the interfacial region and to reduce their own repulsive interaction between neighbors arranging parallel in the adsorbed film. This leads to a lower u H 1 value for HDFC 9 OH than for FDFC 9 OH. (2) The contact of ω-dipoles with hexane molecules in the bulk solution is energetically unfavorable, and thus, the u O 1 value of HDFC 9 OH is expected to be larger than that of FDFC 9 -OH.
- Published
- 2005
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