5 results on '"Van den Eede P"'
Search Results
2. Population structure and spatio-temporal transmission dynamics of Plasmodium vivax after radical cure treatment in a rural village of the Peruvian Amazon.
- Author
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Delgado-Ratto C, Soto-Calle VE, Van den Eede P, Gamboa D, Rosas A, Abatih EN, Rodriguez Ferrucci H, Llanos-Cuentas A, Van Geertruyden JP, Erhart A, and D'Alessandro U
- Subjects
- Adolescent, Adult, Antimalarials therapeutic use, Child, Child, Preschool, Chloroquine therapeutic use, Cohort Studies, Female, Haplotypes, Humans, Malaria, Vivax drug therapy, Malaria, Vivax parasitology, Male, Middle Aged, Peru epidemiology, Polymerase Chain Reaction, Primaquine therapeutic use, Rural Population, Young Adult, Genetic Variation, Malaria, Vivax epidemiology, Malaria, Vivax transmission, Plasmodium vivax genetics
- Abstract
Background: Despite the large burden of Plasmodium vivax, little is known about its transmission dynamics. This study explored the population structure and spatio-temporal dynamics of P. vivax recurrent infections after radical cure in a two-year cohort study carried out in a rural community of the Peruvian Amazon., Methods: A total of 37 P. vivax participants recruited in San Carlos community (Peru) between April and December 2008 were treated radically with chloroquine and primaquine and followed up monthly for two years with systematic blood sampling. All samples were screened for malaria parasites and subsequently all P. vivax infections genotyped using 15 microsatellites. Parasite population structure and dynamics were determined by computing different genetic indices and using spatio-temporal statistics., Results: After radical cure, 76% of the study participants experienced one or more recurrent P. vivax infections, most of them sub-patent and asymptomatic. The parasite population displayed limited genetic diversity (He = 0.49) and clonal structure, with most infections (84%) being monoclonal. Spatio-temporal clusters of specific haplotypes were found throughout the study and persistence of highly frequent haplotypes were observed over several months within the same participants/households., Conclusions: In San Carlos community, P. vivax recurrences were commonly observed after radical treatment, and characterized by asymptomatic, sub-patent and clustered infections (within and between individuals from a few neighbouring households). Moreover low genetic diversity as well as parasite inbreeding are likely to define a clonal parasite population which has important implications on the malaria epidemiology of the study area.
- Published
- 2014
- Full Text
- View/download PDF
3. Multilocus genotyping reveals high heterogeneity and strong local population structure of the Plasmodium vivax population in the Peruvian Amazon.
- Author
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Van den Eede P, Van der Auwera G, Delgado C, Huyse T, Soto-Calle VE, Gamboa D, Grande T, Rodriguez H, Llanos A, Anné J, Erhart A, and D'Alessandro U
- Subjects
- Gene Frequency, Genotype, Humans, Linkage Disequilibrium genetics, Malaria, Vivax epidemiology, Malaria, Vivax transmission, Peru epidemiology, Plasmodium vivax classification, Plasmodium vivax isolation & purification, Polymerase Chain Reaction, Recombination, Genetic, Retrospective Studies, DNA, Protozoan genetics, Genetic Variation, Malaria, Vivax parasitology, Microsatellite Repeats genetics, Plasmodium vivax genetics
- Abstract
Background: Peru is one of the Latin American countries with the highest malaria burden, mainly due to Plasmodium vivax infections. However, little is known about P. vivax transmission dynamics in the Peruvian Amazon, where most malaria cases occur. The genetic diversity and population structure of P. vivax isolates collected in different communities around Iquitos city, the capital of the Peruvian Amazon, was determined., Methods: Plasmodium vivax population structure was determined by multilocus genotyping with 16 microsatellites on 159 P. vivax infected blood samples (mono-infections) collected in four sites around Iquitos city. The population characteristics were assessed only in samples with monoclonal infections (n = 94), and the genetic diversity was determined by calculating the expected heterozygosity and allelic richness. Both linkage disequilibrium and the genetic differentiation (theta) were estimated., Results: The proportion of polyclonal infections varied substantially by site (11% - 70%), with the expected heterozygosity ranging between 0.44 and 0.69; no haplotypes were shared between the different populations. Linkage disequilibrium was present in all populations (IAS 0.14 - 0.61) but was higher in those with fewer polyclonal infections, suggesting inbreeding and a clonal population structure. Strong population differentiation (theta = 0.45) was found and the Bayesian inference cluster analysis identified six clusters based on distinctive allele frequencies., Conclusion: The P. vivax populations circulating in the Peruvian Amazon basin are genetically diverse, strongly differentiated and they have a low effective recombination rate. These results are in line with the low and clustered pattern of malaria transmission observed in the region around Iquitos city.
- Published
- 2010
- Full Text
- View/download PDF
4. Plasmodium knowlesi malaria in Vietnam: some clarifications.
- Author
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Van den Eede P, Vythilingam I, Ngo DT, Nguyen VH, Le XH, D'Alessandro U, and Erhart A
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- Animals, Cluster Analysis, Genotype, Humans, Malaria epidemiology, Phylogeny, Plasmodium knowlesi genetics, Plasmodium vivax genetics, Polymerase Chain Reaction methods, Sequence Analysis, DNA, Vietnam epidemiology, Malaria diagnosis, Malaria parasitology, Plasmodium knowlesi isolation & purification
- Abstract
A recently published comment on a report of Plasmodium knowlesi infections in Vietnam states that this may not accurately represent the situation in the study area because the PCR primers used may cross-hybridize with Plasmodium vivax. Nevertheless, P. knowlesi infections have been confirmed by sequencing. In addition, a neighbour-joining tree based on the 18S S-Type SSUrRNA gene shows that the Vietnamese samples clearly cluster with the P. knowlesi isolates identified in Malaysia and are distinct from the corresponding P. vivax sequences. All samples came from asymptomatic individuals who did not consult for fever during the months preceding or following the survey, indicating that asymptomatic P. knowlesi infections occur in this population, although this does not exclude the occurrence of symptomatic cases. Large-scale studies to determine the extent and the epidemiology of P. knowlesi malaria in Vietnam are further needed.
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- 2010
- Full Text
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5. Human Plasmodium knowlesi infections in young children in central Vietnam.
- Author
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Van den Eede P, Van HN, Van Overmeir C, Vythilingam I, Duc TN, Hung le X, Manh HN, Anné J, D'Alessandro U, and Erhart A
- Subjects
- Adult, Animals, Blood parasitology, Child, Preschool, Cross-Sectional Studies, DNA, Protozoan chemistry, DNA, Protozoan genetics, Female, Humans, Male, Plasmodium knowlesi genetics, Plasmodium malariae isolation & purification, Polymerase Chain Reaction methods, Sequence Analysis, DNA, Vietnam epidemiology, Malaria epidemiology, Malaria parasitology, Plasmodium knowlesi isolation & purification
- Abstract
Background: Considering increasing reports on human infections by Plasmodium knowlesi in Southeast Asian countries, blood samples collected during two large cross-sectional malariometric surveys carried out in a forested area of central Vietnam in 2004 and 2005 were screened for this parasite., Methods: Blood samples collected at the 2004 survey and positive for Plasmodium malariae were randomly selected for PCR analysis detecting P. knowlesi. Blood samples collected in 2005 from the same individuals were screened again for P. knowlesi. Positive samples were confirmed by sequencing. Family members of positive cases who participated in both surveys were also screened., Results: Ninety-five samples with P. malariae mono- or mixed infections identified by species-specific PCR were screened for P. knowlesi. Among the five (5.2%) positive samples by PCR, three were confirmed to be P. knowlesi infections by sequencing, two young children (<5 years old) and a young man, all asymptomatic at the time of the survey and for the next six months after the survey. One of the two children was still positive one year later. No infection was found among the family members., Conclusion: Plasmodium knowlesi infections in humans can be found in central Vietnam. A small child was positive for P. knowlesi in both surveys at one year interval, though it is unclear whether it was the same or a new infection.
- Published
- 2009
- Full Text
- View/download PDF
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