1. Rapid detection of strawberry mottle virus using reverse transcription recombinase polymerase amplification with lateral flow strip.
- Author
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Zou X, Dong C, Ni Y, Yuan S, and Gao QH
- Subjects
- China, Nucleic Acid Amplification Techniques methods, Recombinases genetics, Reverse Transcription, Sensitivity and Specificity, Fragaria, Secoviridae genetics
- Abstract
Strawberry mottle virus (SMoV) is one of the main RNA viruses that profoundly affects the growth of strawberries worldwide. The rapid on-site detection of SMoV described here can be applied to produce virus-free strawberry seedlings. Reverse transcriptase recombinase polymerase amplification (RT-RPA) was combined with lateral flow (LF) strip to rapidly detect SMoV. The detection limit was 500 fg of RNA under optimized conditions. The SMoV-RT-RPA-LF assay was optimal with a combination of 2 μL reverse primer (5 μM) and 0.6 μL probe (10 μM) in a 50 μL RT-RPA reaction mixture for isothermal amplification at 40 ℃ for 15 min. In addition, 100 suspected samples were collected from different regions in the Shanghai suburbs. The SMoV-RT-RPA-LF assay showed that 3 of these 100 samples were positive for SMoV, which was in good concordance with the reverse transcription polymerase chain reaction (RT-PCR) results. The primers and probe had a unique specificity to SMoV because there was no cross-reaction with other strawberry viruses. This study provides an effective technique for the rapid on-site detection of SMoV to ensure a virus-free strawberry nursery., (Copyright © 2022 Elsevier B.V. All rights reserved.)
- Published
- 2022
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