1. Electrostatics affects formation of Watson-Crick complex between DNA bases in monolayers of nucleolipids deposited at a gold electrode surface
- Author
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Francisco Prieto-Dapena, Manuela Rueda, ZhangFei Su, Jacek Lipkowski, Julia Alvarez-Malmagro, Universidad de Sevilla. Departamento de Química Física, Ministerio de Ciencia e Innovación (MICIN). España, Junta de Andalucía, and Natural Sciences and Engineering Research Council of Canada (NSERC)
- Subjects
1,2-Dipalmitoyl-sn-glycero-3-cytidine nucleolipid ,Materials science ,Absorption spectroscopy ,Mixed nucleolipid-phospholipid monolayer ,General Chemical Engineering ,Cytidine ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Electrostatics ,Electrochemistry ,Spectroelectrochemical sensing ,01 natural sciences ,0104 chemical sciences ,Nucleobase ,chemistry.chemical_compound ,Crystallography ,chemistry ,Monolayer ,Electrode ,guanine comlex [Cytosine] ,Photon modulation infrared reflection absorption spectroscopy (PM-IRRAS) ,Moiety ,0210 nano-technology - Abstract
Chronocoulometry was applied to determine charge in a monolayer of nucleolipid (1,2-dipalmitoyl-sn‑glycero-3-(cytidine diphosphate)) deposited at a gold electrode surface. The immersion method was used to measure the potential of zero charge of the interface (Epzci), which is a sum of charge on the monolayer of the nucleolipid and charge on the gold surface. Photon polarization infrared reflection absorption spectroscopy (PM-IRRAS) was used to determine formation of the Watson-Crick complex between terminal cytidine moiety of the nucleolipid and guanine (its complementary base) added to the solution. The combination of electrochemical and spectroscopic studies allowed one to demonstrate that the Watson-Crick complex is formed when the interface is positively charged. The potential applied to the electrode affects not only the complex formation but also orientation of the cytosine moiety. The complex is formed when the cytosine moiety is oriented assuming a small angle with respect to the electrode surface. Ministerio de Ciencia e Innovación CTQ2014-57515-C2-1-R, RED2018-102412-T Junta de Andalucía FQM202 Natural Sciences and Engineering Research Council of Canada (NSERC) RG-03958
- Published
- 2021